CmUC02G030190 (gene) Watermelon (USVL531) v1

Overview
NameCmUC02G030190
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
Descriptionglycine-rich protein 2-like
LocationCmU531Chr02: 4029949 .. 4030971 (-)
RNA-Seq ExpressionCmUC02G030190
SyntenyCmUC02G030190
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGAAATCCCAAAAGTACCCTTGGCCGTTAGACTTCCGTCGCAAATCGCACGGCGAGTTGCTCCATTCCAAGGCAGAGAAGCGGAAGAGCCCTGGCCGTCAGATCTCGTCGGAAACCACCCGCCGTCGCTGAGAATCGGACGGTCAGCATCGAATAATGCGACCCCACAAAATCACAAATGGAAAAAGCGTCGTTTACGGATGACGGGGCGCTCTTCCCGTTTCCAAGCTTTTCGATTCACAAAGTACGTTTCTTTTTTTTTTTTTTTAATAAATTTTTCTTCCTTATTATATATAAAAACCCTTTTTCTCCCAAATCTAGAGAGAGAAATTGGGTGATTAGGGTTTTGCAGTTGTTGGGTTTCTTTGTGAGAGAGAAGAAGAGATCGAGAAATGGCTGAAAGGGTTAGTGGGAAAGTGAAGTGGTTCAGTGACCAGAAAGGCTATGGCTTCATTTCTCCCAACGATGGAGGTGAAGATCTTTTCGTTCATCAGTCTTCCATCAGATCCGACGGTTTCCGAAGCCTCGGCGTTGGTGAGGATGTCGAGTTTCTGATCGAGGCTGAGTCCGATGGCCGTTCCAAGGCTGTTGATGTCACCGGCCCAGGAGAAGCTTCTGTGCAGGGAAGTCGCGGTGGTGGCGGCGGAGGTGGAGGAGGTGGTTACTCCAGCGGAGGAGGAGGTGGGTATGGAGGAGGAGGCGGTGGTGGAAGGGGGAGACGTGGTGGTGGTGGATATGGGTTTAACGGTGGAAGTGGCGGCGGTGGCCGAGGTGGGTACGGCGGTGGTGGAGGTGGGTATGGTGGTGGGGGTTATGGAGGAGGTGGTGGGGGCGGTGGAGGTGGTGCTTGTTTCAAGTGTGGTGAGACTGGCCATATGGCGAGGGACTGCTACCAGAGTGGATCTCAAGGCGGTGGAGATAGGTACGGCGGAGGCGGAGGCGGCGGTGGCGGTGGAAACTGCTATAGCTGTGGTGAATCTGGGCATTTCGCTAGGGAGTGTCCAAGCAGTGGTCGTTGA

mRNA sequence

ATGAGTGAAATCCCAAAAGTACCCTTGGCCGTTAGACTTCCGTCGCAAATCGCACGGCGAGTTGCTCCATTCCAAGGCAGAGAAGCGGAAGAGCCCTGGCCGTCAGATCTCGTCGGAAACCACCCGCCGTCGCTGAGAATCGGACGGTCAGCATCGAATAATGCGACCCCACAAAATCACAAATGGAAAAAGCGTCGTTTACGGATGACGGGGCGCTCTTCCCGTTTCCAAGCTTTTCGATTCACAAAAAGAAGAGATCGAGAAATGGCTGAAAGGGTTAGTGGGAAAGTGAAGTGGTTCAGTGACCAGAAAGGCTATGGCTTCATTTCTCCCAACGATGGAGGTGAAGATCTTTTCGTTCATCAGTCTTCCATCAGATCCGACGGTTTCCGAAGCCTCGGCGTTGGTGAGGATGTCGAGTTTCTGATCGAGGCTGAGTCCGATGGCCGTTCCAAGGCTGTTGATGTCACCGGCCCAGGAGAAGCTTCTGTGCAGGGAAGTCGCGGTGGTGGCGGCGGAGGTGGAGGAGGTGGTTACTCCAGCGGAGGAGGAGGTGGGTATGGAGGAGGAGGCGGTGGTGGAAGGGGGAGACGTGGTGGTGGTGGATATGGGTTTAACGGTGGAAGTGGCGGCGGTGGCCGAGGTGGGTACGGCGGTGGTGGAGGTGGGTATGGTGGTGGGGGTTATGGAGGAGGTGGTGGGGGCGGTGGAGGTGGTGCTTGTTTCAAGTGTGGTGAGACTGGCCATATGGCGAGGGACTGCTACCAGAGTGGATCTCAAGGCGGTGGAGATAGGTACGGCGGAGGCGGAGGCGGCGGTGGCGGTGGAAACTGCTATAGCTGTGGTGAATCTGGGCATTTCGCTAGGGAGTGTCCAAGCAGTGGTCGTTGA

Coding sequence (CDS)

ATGAGTGAAATCCCAAAAGTACCCTTGGCCGTTAGACTTCCGTCGCAAATCGCACGGCGAGTTGCTCCATTCCAAGGCAGAGAAGCGGAAGAGCCCTGGCCGTCAGATCTCGTCGGAAACCACCCGCCGTCGCTGAGAATCGGACGGTCAGCATCGAATAATGCGACCCCACAAAATCACAAATGGAAAAAGCGTCGTTTACGGATGACGGGGCGCTCTTCCCGTTTCCAAGCTTTTCGATTCACAAAAAGAAGAGATCGAGAAATGGCTGAAAGGGTTAGTGGGAAAGTGAAGTGGTTCAGTGACCAGAAAGGCTATGGCTTCATTTCTCCCAACGATGGAGGTGAAGATCTTTTCGTTCATCAGTCTTCCATCAGATCCGACGGTTTCCGAAGCCTCGGCGTTGGTGAGGATGTCGAGTTTCTGATCGAGGCTGAGTCCGATGGCCGTTCCAAGGCTGTTGATGTCACCGGCCCAGGAGAAGCTTCTGTGCAGGGAAGTCGCGGTGGTGGCGGCGGAGGTGGAGGAGGTGGTTACTCCAGCGGAGGAGGAGGTGGGTATGGAGGAGGAGGCGGTGGTGGAAGGGGGAGACGTGGTGGTGGTGGATATGGGTTTAACGGTGGAAGTGGCGGCGGTGGCCGAGGTGGGTACGGCGGTGGTGGAGGTGGGTATGGTGGTGGGGGTTATGGAGGAGGTGGTGGGGGCGGTGGAGGTGGTGCTTGTTTCAAGTGTGGTGAGACTGGCCATATGGCGAGGGACTGCTACCAGAGTGGATCTCAAGGCGGTGGAGATAGGTACGGCGGAGGCGGAGGCGGCGGTGGCGGTGGAAACTGCTATAGCTGTGGTGAATCTGGGCATTTCGCTAGGGAGTGTCCAAGCAGTGGTCGTTGA

Protein sequence

MSEIPKVPLAVRLPSQIARRVAPFQGREAEEPWPSDLVGNHPPSLRIGRSASNNATPQNHKWKKRRLRMTGRSSRFQAFRFTKRRDREMAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGRSKAVDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRYGGGGGGGGGGNCYSCGESGHFARECPSSGR
Homology
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BLAST of CmUC02G030190 vs. NCBI nr
Match: XP_038888820.1 (glycine-rich protein 2-like [Benincasa hispida])

HSP 1 Score: 313.9 bits (803), Expect = 1.5e-81
Identity = 203/208 (97.60%), Postives = 203/208 (97.60%), Query Frame = 0 

Query: 89  MAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 148
           MAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD
Sbjct: 1   MAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 60

Query: 149 GRSKAVDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGG 208
           GRSKAVDVTGPGEASVQGSR GGG GGGGGYSS GGGGYGGGGGGGRGRRGGGGYGFNGG
Sbjct: 61  GRSKAVDVTGPGEASVQGSR-GGGSGGGGGYSS-GGGGYGGGGGGGRGRRGGGGYGFNGG 120

Query: 209 SGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRYGG 268
           SGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRY  
Sbjct: 121 SGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRY-- 180

Query: 269 GGGGGGGGNCYSCGESGHFARECPSSGR 297
           GGGGGGGGNCYSCGESGHFARECPSSGR
Sbjct: 181 GGGGGGGGNCYSCGESGHFARECPSSGR 204

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BLAST of CmUC02G030190 vs. NCBI nr
Match: XP_011658593.1 (glycine-rich protein 2 [Cucumis sativus] >KGN43237.1 hypothetical protein Csa_020571 [Cucumis sativus])

HSP 1 Score: 312.0 bits (798), Expect = 5.5e-81
Identity = 205/214 (95.79%), Postives = 205/214 (95.79%), Query Frame = 0 

Query: 89  MAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 148
           M ERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD
Sbjct: 1   MGERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 60

Query: 149 GRSKAVDVTGPGEASVQGSRGGGGG----GGGGGYSSGGGGGYGGGGGGGRGRRGGGGYG 208
           GRSKAVDVTGPGEASVQGSRGGGGG    GGGGGYSS  GGGYGGGGGGGRGRRGGGGYG
Sbjct: 61  GRSKAVDVTGPGEASVQGSRGGGGGGGGAGGGGGYSS--GGGYGGGGGGGRGRRGGGGYG 120

Query: 209 FNGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQ-GGG 268
           FNGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQ GGG
Sbjct: 121 FNGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGG 180

Query: 269 DRY-GGGGGGGGGGNCYSCGESGHFARECPSSGR 297
           DRY GGGGGGGGGGNCYSCGESGHFARECPSSGR
Sbjct: 181 DRYGGGGGGGGGGGNCYSCGESGHFARECPSSGR 212

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BLAST of CmUC02G030190 vs. NCBI nr
Match: XP_008448117.2 (PREDICTED: LOW QUALITY PROTEIN: glycine-rich protein 2-like, partial [Cucumis melo])

HSP 1 Score: 284.3 bits (726), Expect = 1.2e-72
Identity = 190/200 (95.00%), Postives = 190/200 (95.00%), Query Frame = 0 

Query: 100 FSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGRSKAVDVTGP 159
           FSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGRSKAVDVTGP
Sbjct: 1   FSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGRSKAVDVTGP 60

Query: 160 GEASVQGSR---GGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGGSGGGGRGG 219
           GEASVQGSR   GGGGGGGGGGYSS  GGGYGGGGGGGRG RGGGGYGFNGGSGGGGRGG
Sbjct: 61  GEASVQGSRGGGGGGGGGGGGGYSS--GGGYGGGGGGGRGXRGGGGYGFNGGSGGGGRGG 120

Query: 220 YGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRYGGGGGGGGGG 279
           YGGGGGGYGGGGY GGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRY   GGGGGGG
Sbjct: 121 YGGGGGGYGGGGY-GGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRY---GGGGGGG 180

Query: 280 NCYSCGESGHFARECPSSGR 297
           NCYSCGESGHFARECPSSGR
Sbjct: 181 NCYSCGESGHFARECPSSGR 194

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BLAST of CmUC02G030190 vs. NCBI nr
Match: XP_022989065.1 (glycine-rich protein 2-like [Cucurbita maxima])

HSP 1 Score: 280.4 bits (716), Expect = 1.8e-71
Identity = 189/211 (89.57%), Postives = 193/211 (91.47%), Query Frame = 0 

Query: 89  MAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 148
           M ERVSGKVKWFSDQKGYGFISPN+GGEDLFVHQSSIRS+GFRSLGVGEDVEF IEAE+D
Sbjct: 1   MGERVSGKVKWFSDQKGYGFISPNEGGEDLFVHQSSIRSEGFRSLGVGEDVEFQIEAEAD 60

Query: 149 GRSKAVDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGG 208
           GRSKAVDVTGPGE+SVQGSR GGGGGGGG Y  GGGGGY GGGGGGRGRR  GGYGFNGG
Sbjct: 61  GRSKAVDVTGPGESSVQGSR-GGGGGGGGSYGGGGGGGY-GGGGGGRGRR--GGYGFNGG 120

Query: 209 SGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRY-- 268
           SGGGGRG YGG GGG  GGGYG GGGGGGGGACFKCGE GHMARDCYQSGSQGGGDRY  
Sbjct: 121 SGGGGRGLYGGSGGGGYGGGYGSGGGGGGGGACFKCGEAGHMARDCYQSGSQGGGDRYSG 180

Query: 269 -GGGGGGGGGGNCYSCGESGHFARECPSSGR 297
            GGGGGGGGGGNCYSCGESGHFARECPSSGR
Sbjct: 181 GGGGGGGGGGGNCYSCGESGHFARECPSSGR 207

[Close]
BLAST of CmUC02G030190 vs. NCBI nr
Match: XP_022928350.1 (glycine-rich protein 2-like [Cucurbita moschata] >KAG6589006.1 Cold shock domain-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015270.1 Cold shock domain-containing protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 274.2 bits (700), Expect = 1.3e-69
Identity = 186/208 (89.42%), Postives = 190/208 (91.35%), Query Frame = 0 

Query: 89  MAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 148
           M ERVSGKVKWFSDQKGYGFISPN+GGEDLFVHQSSIRS+GFRSLGVGEDVEF IEAE+D
Sbjct: 1   MGERVSGKVKWFSDQKGYGFISPNEGGEDLFVHQSSIRSEGFRSLGVGEDVEFQIEAEAD 60

Query: 149 GRSKAVDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGG 208
           GRSKAVDVTGPGE+SVQGSR GGGGGGGG Y  GGGGGY GGGGGGRGRR  GGYGFNGG
Sbjct: 61  GRSKAVDVTGPGESSVQGSR-GGGGGGGGSYGGGGGGGY-GGGGGGRGRR--GGYGFNGG 120

Query: 209 SGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRYGG 268
           SGGGGRG YGG GGG  GGGY G GGGGGGGACFKCGE GHMARDCYQSGSQGGGDRY  
Sbjct: 121 SGGGGRGSYGGSGGGGYGGGY-GSGGGGGGGACFKCGEAGHMARDCYQSGSQGGGDRY-S 180

Query: 269 GGGGGGGGNCYSCGESGHFARECPSSGR 297
           GGGGGGGGNCYSCGESGHFARECPSSGR
Sbjct: 181 GGGGGGGGNCYSCGESGHFARECPSSGR 202

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BLAST of CmUC02G030190 vs. ExPASy Swiss-Prot
Match: P27484 (Glycine-rich protein 2 OS=Nicotiana sylvestris OX=4096 GN=GRP-2 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 8.1e-51
Identity = 150/211 (71.09%), Postives = 162/211 (76.78%), Query Frame = 0 

Query: 88  EMAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAES 147
           E  +R  G VKWFSDQKG+GFI+P+DGGEDLFVHQS IRS+GFRSL  GE VEF +E+  
Sbjct: 4   ESGQRAKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVESGG 63

Query: 148 DGRSKAVDVTGPGEASVQGSRGGGGGGG--GGGYSSGGGGGYGGGGGGGRGRRGGGGYGF 207
           DGR+KAVDVTGP  A+VQG RGGGGGGG  GGG   GG GGYGGGG GG    GGG  G+
Sbjct: 64  DGRTKAVDVTGPDGAAVQGGRGGGGGGGGRGGGGYGGGSGGYGGGGRGGSRGYGGGDGGY 123

Query: 208 NGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDR 267
            GG G GG   YGGGGGGYGGGG  GGGG GGG  CFKCGE+GH ARDC QSG  GGG R
Sbjct: 124 GGGGGYGGGSRYGGGGGGYGGGGGYGGGGSGGGSGCFKCGESGHFARDCSQSGGGGGGGR 183

Query: 268 YGGGGGGGGGGNCYSCGESGHFARECPSSGR 297
           +GGGGGGGGGG CY CGE GHFAREC S GR
Sbjct: 184 FGGGGGGGGGGGCYKCGEDGHFARECTSGGR 214

[Close]
BLAST of CmUC02G030190 vs. ExPASy Swiss-Prot
Match: Q38896 (Cold shock domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=CSP4 PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.2e-39
Identity = 127/212 (59.91%), Postives = 145/212 (68.40%), Query Frame = 0 

Query: 91  ERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGR 150
           +R  G VKWF  QKG+GFI+P+DGG+DLFVHQSSIRS+GFRSL   E VEF +E ++ GR
Sbjct: 13  DRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSGR 72

Query: 151 SKAVDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGGSG 210
            KA++V+GP  A VQG+ GGGG       SSGG GG+GGGGG G G RGGG Y       
Sbjct: 73  PKAIEVSGPDGAPVQGNSGGGG-------SSGGRGGFGGGGGRG-GGRGGGSY------- 132

Query: 211 GGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSG----SQGGGDRY 270
                     GGGYGG G GG GGGGG  +CFKCGE GHMAR+C Q G      GGG RY
Sbjct: 133 ----------GGGYGGRGSGGRGGGGGDNSCFKCGEPGHMARECSQGGGGYSGGGGGGRY 192

Query: 271 GGGGGGGGGG---NCYSCGESGHFARECPSSG 296
           G GGGGGGGG   +CYSCGESGHFAR+C S G
Sbjct: 193 GSGGGGGGGGGGLSCYSCGESGHFARDCTSGG 199

[Close]
BLAST of CmUC02G030190 vs. ExPASy Swiss-Prot
Match: Q41188 (Cold shock protein 2 OS=Arabidopsis thaliana OX=3702 GN=CSP2 PE=1 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.1e-38
Identity = 130/228 (57.02%), Postives = 147/228 (64.47%), Query Frame = 0 

Query: 86  DREMAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEA 145
           D    ER  G VKWF  QKG+GFI+P+DGG+DLFVHQSSIRS+GFRSL   E VEF +E 
Sbjct: 4   DNGGGERRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLAAEEAVEFEVEI 63

Query: 146 ESDGRSKAVDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGF 205
           +++ R KA+DV+GP  A VQG+ GGG        SSGG GG+GGG GGGR          
Sbjct: 64  DNNNRPKAIDVSGPDGAPVQGNSGGG--------SSGGRGGFGGGRGGGR---------- 123

Query: 206 NGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQ--------S 265
             GSG    GGYGGGGGGYG    G GGGG GG  C+KCGE GHMARDC +         
Sbjct: 124 --GSG----GGYGGGGGGYG----GRGGGGRGGSDCYKCGEPGHMARDCSEGGGGYGGGG 183

Query: 266 GSQGGGDRYGGG---------GGGGGGGNCYSCGESGHFARECPSSGR 297
           G  GGG  YGGG         GGGGGGG+CYSCGESGHFAR+C S GR
Sbjct: 184 GGYGGGGGYGGGGGGYGGGGRGGGGGGGSCYSCGESGHFARDCTSGGR 203

[Close]
BLAST of CmUC02G030190 vs. ExPASy Swiss-Prot
Match: Q94C69 (Cold shock domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=CSP3 PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 7.6e-17
Identity = 127/270 (47.04%), Postives = 144/270 (53.33%), Query Frame = 0 

Query: 88  EMAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAES 147
           + A R  GKV WFSD KGYGFI+P+DGGE+LFVHQSSI SDGFRSL +GE VE+ I   S
Sbjct: 6   QSAARSIGKVSWFSDGKGYGFITPDDGGEELFVHQSSIVSDGFRSLTLGESVEYEIALGS 65

Query: 148 DGRSKAVDVTGPGEASV----QGSRGGGGG---------------GGGGGYSSGGGGGYG 207
           DG++KA++VT PG  S+      SRG GG                GG GG S GGGGG  
Sbjct: 66  DGKTKAIEVTAPGGGSLNKKENSSRGSGGNCFNCGEVGHMAKDCDGGSGGKSFGGGGGRR 125

Query: 208 GGGGG-----------GRGRRGGGGYGFNGGSGGGGRGGYGGG---------GGGYGGGG 267
            GG G            R  R  GG G +GG GGGGR  Y  G          GG GG  
Sbjct: 126 SGGEGECYMCGDVGHFARDCRQSGG-GNSGGGGGGGRPCYSCGEVGHLAKDCRGGSGGNR 185

Query: 268 YGGGGG-GGGGGACFKCGETGHMARDCYQSGSQGGGDRYGGG------------------ 296
           YGGGGG G GG  C+ CG  GH ARDC Q+   GGG+  GGG                  
Sbjct: 186 YGGGGGRGSGGDGCYMCGGVGHFARDCRQN---GGGNVGGGGSTCYTCGGVGHIAKVCTS 245

[Close]
BLAST of CmUC02G030190 vs. ExPASy Swiss-Prot
Match: O65639 (Cold shock protein 1 OS=Arabidopsis thaliana OX=3702 GN=CSP1 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 8.7e-13
Identity = 108/217 (49.77%), Postives = 131/217 (60.37%), Query Frame = 0 

Query: 88  EMAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAES 147
           + A R +GKV WF+  KGYGFI+P+DG  +LFVHQSSI S+G+RSL VG+ VEF I   S
Sbjct: 6   QSAARSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGS 65

Query: 148 DGRSKAVDVTGPGEASVQ---GSRGGG---GGGGGGGYSSGGGG------GYGGGGGGGR 207
           DG++KAV+VT PG  S++    SRG G   GGGG G Y+ G  G      G GGGGGGG 
Sbjct: 66  DGKTKAVNVTAPGGGSLKKENNSRGNGARRGGGGSGCYNCGELGHISKDCGIGGGGGGGE 125

Query: 208 GR-RGGGGYGFNGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDC 267
            R RGG G    G +G   R     G G   G   GG  G      C+ CG+ GH+ARDC
Sbjct: 126 RRSRGGEGCYNCGDTGHFARDCTSAGNGDQRGATKGGNDG------CYTCGDVGHVARDC 185

Query: 268 YQSGSQGGGDRYGGGGGGGGGGNCYSCGESGHFAREC 292
            Q  S G GD+ G   GG  G  CY+CG+ GHFAR+C
Sbjct: 186 TQK-SVGNGDQRGAVKGGNDG--CYTCGDVGHFARDC 213

[Close]
BLAST of CmUC02G030190 vs. ExPASy TrEMBL
Match: A0A0A0K4M5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G010300 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 2.7e-81
Identity = 205/214 (95.79%), Postives = 205/214 (95.79%), Query Frame = 0 

Query: 89  MAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 148
           M ERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD
Sbjct: 1   MGERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 60

Query: 149 GRSKAVDVTGPGEASVQGSRGGGGG----GGGGGYSSGGGGGYGGGGGGGRGRRGGGGYG 208
           GRSKAVDVTGPGEASVQGSRGGGGG    GGGGGYSS  GGGYGGGGGGGRGRRGGGGYG
Sbjct: 61  GRSKAVDVTGPGEASVQGSRGGGGGGGGAGGGGGYSS--GGGYGGGGGGGRGRRGGGGYG 120

Query: 209 FNGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQ-GGG 268
           FNGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQ GGG
Sbjct: 121 FNGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGG 180

Query: 269 DRY-GGGGGGGGGGNCYSCGESGHFARECPSSGR 297
           DRY GGGGGGGGGGNCYSCGESGHFARECPSSGR
Sbjct: 181 DRYGGGGGGGGGGGNCYSCGESGHFARECPSSGR 212

[Close]
BLAST of CmUC02G030190 vs. ExPASy TrEMBL
Match: A0A1S3BIY4 (LOW QUALITY PROTEIN: glycine-rich protein 2-like OS=Cucumis melo OX=3656 GN=LOC103490405 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 6.0e-73
Identity = 190/200 (95.00%), Postives = 190/200 (95.00%), Query Frame = 0 

Query: 100 FSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGRSKAVDVTGP 159
           FSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGRSKAVDVTGP
Sbjct: 1   FSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGRSKAVDVTGP 60

Query: 160 GEASVQGSR---GGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGGSGGGGRGG 219
           GEASVQGSR   GGGGGGGGGGYSS  GGGYGGGGGGGRG RGGGGYGFNGGSGGGGRGG
Sbjct: 61  GEASVQGSRGGGGGGGGGGGGGYSS--GGGYGGGGGGGRGXRGGGGYGFNGGSGGGGRGG 120

Query: 220 YGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRYGGGGGGGGGG 279
           YGGGGGGYGGGGY GGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRY   GGGGGGG
Sbjct: 121 YGGGGGGYGGGGY-GGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRY---GGGGGGG 180

Query: 280 NCYSCGESGHFARECPSSGR 297
           NCYSCGESGHFARECPSSGR
Sbjct: 181 NCYSCGESGHFARECPSSGR 194

[Close]
BLAST of CmUC02G030190 vs. ExPASy TrEMBL
Match: A0A6J1JLC0 (glycine-rich protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111486249 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 8.6e-72
Identity = 189/211 (89.57%), Postives = 193/211 (91.47%), Query Frame = 0 

Query: 89  MAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 148
           M ERVSGKVKWFSDQKGYGFISPN+GGEDLFVHQSSIRS+GFRSLGVGEDVEF IEAE+D
Sbjct: 1   MGERVSGKVKWFSDQKGYGFISPNEGGEDLFVHQSSIRSEGFRSLGVGEDVEFQIEAEAD 60

Query: 149 GRSKAVDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGG 208
           GRSKAVDVTGPGE+SVQGSR GGGGGGGG Y  GGGGGY GGGGGGRGRR  GGYGFNGG
Sbjct: 61  GRSKAVDVTGPGESSVQGSR-GGGGGGGGSYGGGGGGGY-GGGGGGRGRR--GGYGFNGG 120

Query: 209 SGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRY-- 268
           SGGGGRG YGG GGG  GGGYG GGGGGGGGACFKCGE GHMARDCYQSGSQGGGDRY  
Sbjct: 121 SGGGGRGLYGGSGGGGYGGGYGSGGGGGGGGACFKCGEAGHMARDCYQSGSQGGGDRYSG 180

Query: 269 -GGGGGGGGGGNCYSCGESGHFARECPSSGR 297
            GGGGGGGGGGNCYSCGESGHFARECPSSGR
Sbjct: 181 GGGGGGGGGGGNCYSCGESGHFARECPSSGR 207

[Close]
BLAST of CmUC02G030190 vs. ExPASy TrEMBL
Match: A0A6J1ERG9 (glycine-rich protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111435206 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 6.2e-70
Identity = 186/208 (89.42%), Postives = 190/208 (91.35%), Query Frame = 0 

Query: 89  MAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 148
           M ERVSGKVKWFSDQKGYGFISPN+GGEDLFVHQSSIRS+GFRSLGVGEDVEF IEAE+D
Sbjct: 1   MGERVSGKVKWFSDQKGYGFISPNEGGEDLFVHQSSIRSEGFRSLGVGEDVEFQIEAEAD 60

Query: 149 GRSKAVDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGG 208
           GRSKAVDVTGPGE+SVQGSR GGGGGGGG Y  GGGGGY GGGGGGRGRR  GGYGFNGG
Sbjct: 61  GRSKAVDVTGPGESSVQGSR-GGGGGGGGSYGGGGGGGY-GGGGGGRGRR--GGYGFNGG 120

Query: 209 SGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRYGG 268
           SGGGGRG YGG GGG  GGGY G GGGGGGGACFKCGE GHMARDCYQSGSQGGGDRY  
Sbjct: 121 SGGGGRGSYGGSGGGGYGGGY-GSGGGGGGGACFKCGEAGHMARDCYQSGSQGGGDRY-S 180

Query: 269 GGGGGGGGNCYSCGESGHFARECPSSGR 297
           GGGGGGGGNCYSCGESGHFARECPSSGR
Sbjct: 181 GGGGGGGGNCYSCGESGHFARECPSSGR 202

[Close]
BLAST of CmUC02G030190 vs. ExPASy TrEMBL
Match: A0A6J1HY03 (glycine-rich protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111468487 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 2.5e-63
Identity = 171/211 (81.04%), Postives = 176/211 (83.41%), Query Frame = 0 

Query: 89  MAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 148
           M+ERVSGKVKWFSDQKGYGFISPN+GGEDLFVHQSSIRSDGFRSLGVGEDVEFLIE E+D
Sbjct: 1   MSERVSGKVKWFSDQKGYGFISPNEGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEPEAD 60

Query: 149 GRSKAVDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFN-G 208
           GR KAVDVTGPGE+SVQGSR                   GGGGGG RG R GGGYGFN G
Sbjct: 61  GRCKAVDVTGPGESSVQGSR-------------------GGGGGGERGSR-GGGYGFNGG 120

Query: 209 GSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRY- 268
           G GGGGRGGYG GGGGY GGGYGGGGGGGG   CFKCGETGHMARDCYQ GSQGGGDRY 
Sbjct: 121 GGGGGGRGGYGRGGGGY-GGGYGGGGGGGG---CFKCGETGHMARDCYQGGSQGGGDRYG 180

Query: 269 -GGGGGGGGGGNCYSCGESGHFARECPSSGR 297
            GGGGGGGGGGNCYSCGESGHFAR+C SSGR
Sbjct: 181 GGGGGGGGGGGNCYSCGESGHFARDCQSSGR 187

[Close]
BLAST of CmUC02G030190 vs. TAIR 10
Match: AT2G21060.1 (glycine-rich protein 2B )

HSP 1 Score: 163.7 bits (413), Expect = 2.3e-40
Identity = 127/212 (59.91%), Postives = 145/212 (68.40%), Query Frame = 0 

Query: 91  ERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGR 150
           +R  G VKWF  QKG+GFI+P+DGG+DLFVHQSSIRS+GFRSL   E VEF +E ++ GR
Sbjct: 13  DRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSGR 72

Query: 151 SKAVDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGGSG 210
            KA++V+GP  A VQG+ GGGG       SSGG GG+GGGGG G G RGGG Y       
Sbjct: 73  PKAIEVSGPDGAPVQGNSGGGG-------SSGGRGGFGGGGGRG-GGRGGGSY------- 132

Query: 211 GGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSG----SQGGGDRY 270
                     GGGYGG G GG GGGGG  +CFKCGE GHMAR+C Q G      GGG RY
Sbjct: 133 ----------GGGYGGRGSGGRGGGGGDNSCFKCGEPGHMARECSQGGGGYSGGGGGGRY 192

Query: 271 GGGGGGGGGG---NCYSCGESGHFARECPSSG 296
           G GGGGGGGG   +CYSCGESGHFAR+C S G
Sbjct: 193 GSGGGGGGGGGGLSCYSCGESGHFARDCTSGG 199

[Close]
BLAST of CmUC02G030190 vs. TAIR 10
Match: AT4G38680.1 (glycine rich protein 2 )

HSP 1 Score: 161.0 bits (406), Expect = 1.5e-39
Identity = 130/228 (57.02%), Postives = 147/228 (64.47%), Query Frame = 0 

Query: 86  DREMAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEA 145
           D    ER  G VKWF  QKG+GFI+P+DGG+DLFVHQSSIRS+GFRSL   E VEF +E 
Sbjct: 4   DNGGGERRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLAAEEAVEFEVEI 63

Query: 146 ESDGRSKAVDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGF 205
           +++ R KA+DV+GP  A VQG+ GGG        SSGG GG+GGG GGGR          
Sbjct: 64  DNNNRPKAIDVSGPDGAPVQGNSGGG--------SSGGRGGFGGGRGGGR---------- 123

Query: 206 NGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQ--------S 265
             GSG    GGYGGGGGGYG    G GGGG GG  C+KCGE GHMARDC +         
Sbjct: 124 --GSG----GGYGGGGGGYG----GRGGGGRGGSDCYKCGEPGHMARDCSEGGGGYGGGG 183

Query: 266 GSQGGGDRYGGG---------GGGGGGGNCYSCGESGHFARECPSSGR 297
           G  GGG  YGGG         GGGGGGG+CYSCGESGHFAR+C S GR
Sbjct: 184 GGYGGGGGYGGGGGGYGGGGRGGGGGGGSCYSCGESGHFARDCTSGGR 203

[Close]
BLAST of CmUC02G030190 vs. TAIR 10
Match: AT2G17870.1 (cold shock domain protein 3 )

HSP 1 Score: 89.4 bits (220), Expect = 5.4e-18
Identity = 127/270 (47.04%), Postives = 144/270 (53.33%), Query Frame = 0 

Query: 88  EMAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAES 147
           + A R  GKV WFSD KGYGFI+P+DGGE+LFVHQSSI SDGFRSL +GE VE+ I   S
Sbjct: 6   QSAARSIGKVSWFSDGKGYGFITPDDGGEELFVHQSSIVSDGFRSLTLGESVEYEIALGS 65

Query: 148 DGRSKAVDVTGPGEASV----QGSRGGGGG---------------GGGGGYSSGGGGGYG 207
           DG++KA++VT PG  S+      SRG GG                GG GG S GGGGG  
Sbjct: 66  DGKTKAIEVTAPGGGSLNKKENSSRGSGGNCFNCGEVGHMAKDCDGGSGGKSFGGGGGRR 125

Query: 208 GGGGG-----------GRGRRGGGGYGFNGGSGGGGRGGYGGG---------GGGYGGGG 267
            GG G            R  R  GG G +GG GGGGR  Y  G          GG GG  
Sbjct: 126 SGGEGECYMCGDVGHFARDCRQSGG-GNSGGGGGGGRPCYSCGEVGHLAKDCRGGSGGNR 185

Query: 268 YGGGGG-GGGGGACFKCGETGHMARDCYQSGSQGGGDRYGGG------------------ 296
           YGGGGG G GG  C+ CG  GH ARDC Q+   GGG+  GGG                  
Sbjct: 186 YGGGGGRGSGGDGCYMCGGVGHFARDCRQN---GGGNVGGGGSTCYTCGGVGHIAKVCTS 245

[Close]
BLAST of CmUC02G030190 vs. TAIR 10
Match: AT4G36020.1 (cold shock domain protein 1 )

HSP 1 Score: 75.9 bits (185), Expect = 6.2e-14
Identity = 108/217 (49.77%), Postives = 131/217 (60.37%), Query Frame = 0 

Query: 88  EMAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAES 147
           + A R +GKV WF+  KGYGFI+P+DG  +LFVHQSSI S+G+RSL VG+ VEF I   S
Sbjct: 6   QSAARSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGS 65

Query: 148 DGRSKAVDVTGPGEASVQ---GSRGGG---GGGGGGGYSSGGGG------GYGGGGGGGR 207
           DG++KAV+VT PG  S++    SRG G   GGGG G Y+ G  G      G GGGGGGG 
Sbjct: 66  DGKTKAVNVTAPGGGSLKKENNSRGNGARRGGGGSGCYNCGELGHISKDCGIGGGGGGGE 125

Query: 208 GR-RGGGGYGFNGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDC 267
            R RGG G    G +G   R     G G   G   GG  G      C+ CG+ GH+ARDC
Sbjct: 126 RRSRGGEGCYNCGDTGHFARDCTSAGNGDQRGATKGGNDG------CYTCGDVGHVARDC 185

Query: 268 YQSGSQGGGDRYGGGGGGGGGGNCYSCGESGHFAREC 292
            Q  S G GD+ G   GG  G  CY+CG+ GHFAR+C
Sbjct: 186 TQK-SVGNGDQRGAVKGGNDG--CYTCGDVGHFARDC 213

The following BLAST results are available for this feature:
BLAST of CmUC02G030190 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038888820.11.5e-8197.60glycine-rich protein 2-like [Benincasa hispida][more]
XP_011658593.15.5e-8195.79glycine-rich protein 2 [Cucumis sativus] >KGN43237.1 hypothetical protein Csa_02... [more]
XP_008448117.21.2e-7295.00PREDICTED: LOW QUALITY PROTEIN: glycine-rich protein 2-like, partial [Cucumis me... [more]
XP_022989065.11.8e-7189.57glycine-rich protein 2-like [Cucurbita maxima][more]
XP_022928350.11.3e-6989.42glycine-rich protein 2-like [Cucurbita moschata] >KAG6589006.1 Cold shock domain... [more]
BLAST of CmUC02G030190 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P274848.1e-5171.09Glycine-rich protein 2 OS=Nicotiana sylvestris OX=4096 GN=GRP-2 PE=2 SV=1[more]
Q388963.2e-3959.91Cold shock domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=CSP4 P... [more]
Q411882.1e-3857.02Cold shock protein 2 OS=Arabidopsis thaliana OX=3702 GN=CSP2 PE=1 SV=1[more]
Q94C697.6e-1747.04Cold shock domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=CSP3 P... [more]
O656398.7e-1349.77Cold shock protein 1 OS=Arabidopsis thaliana OX=3702 GN=CSP1 PE=1 SV=1[more]
BLAST of CmUC02G030190 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K4M52.7e-8195.79Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G010300 PE=4 SV=1[more]
A0A1S3BIY46.0e-7395.00LOW QUALITY PROTEIN: glycine-rich protein 2-like OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A6J1JLC08.6e-7289.57glycine-rich protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111486249 PE=4 SV=... [more]
A0A6J1ERG96.2e-7089.42glycine-rich protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111435206 PE=4 S... [more]
A0A6J1HY032.5e-6381.04glycine-rich protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111468487 PE=4 SV=... [more]
BLAST of CmUC02G030190 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G21060.12.3e-4059.91glycine-rich protein 2B [more]
AT4G38680.11.5e-3957.02glycine rich protein 2 [more]
AT2G17870.15.4e-1847.04cold shock domain protein 3 [more]
AT4G36020.16.2e-1449.77cold shock domain protein 1 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002059Cold-shock protein, DNA-bindingPRINTSPR00050COLDSHOCKcoord: 95..110
score: 63.69
coord: 116..125
score: 64.04
coord: 131..149
score: 40.8
IPR002059Cold-shock protein, DNA-bindingPFAMPF00313CSDcoord: 94..158
e-value: 2.7E-24
score: 84.8
IPR002059Cold-shock protein, DNA-bindingPROSITEPS51857CSD_2coord: 92..158
score: 31.374826
IPR002059Cold-shock protein, DNA-bindingCDDcd04458CSP_CDScoord: 93..158
e-value: 1.08392E-26
score: 97.6493
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 240..256
e-value: 1.4E-5
score: 34.5
coord: 277..293
e-value: 2.2E-5
score: 33.9
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 277..293
e-value: 2.4E-7
score: 30.5
coord: 240..254
e-value: 3.7E-7
score: 29.9
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 241..254
score: 11.053757
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 278..293
score: 11.284516
IPR011129Cold shock domainSMARTSM00357csp_8coord: 94..159
e-value: 6.1E-23
score: 92.2
NoneNo IPR availableGENE3D2.40.50.140coord: 85..169
e-value: 4.8E-28
score: 99.1
NoneNo IPR availableGENE3D4.10.60.10coord: 273..296
e-value: 6.4E-7
score: 30.9
coord: 236..265
e-value: 3.1E-7
score: 31.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..61
NoneNo IPR availablePANTHERPTHR46565COLD SHOCK DOMAIN PROTEIN 2coord: 89..296
NoneNo IPR availablePANTHERPTHR46565:SF8COLD SHOCK PROTEIN 2coord: 89..296
IPR019844Cold-shock (CSD) domainPROSITEPS00352CSD_1coord: 106..125
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 231..294
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 89..158

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC02G030190.1CmUC02G030190.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding