CmUC02G029430 (gene) Watermelon (USVL531) v1

Overview
NameCmUC02G029430
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr02: 3317315 .. 3320400 (+)
RNA-Seq ExpressionCmUC02G029430
SyntenyCmUC02G029430
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCCGCCAACAAAAAGTATAGAAAGAAATATCCAATTTCATGATTCTGTGCTAGTTAGAGTTATCTACTTCTTCAACTTCTTTGTCCCATAAACTCAGCAGCCTTCAAGATTTGCATTTGTCTTTGATTTAGAGATGTTTCTATTAGATTTGATGTTGTTTGCTAGTAGTTTTCAGGTAATTATGAGAAAACGAGTTTTGGAAATTAAAAGTGTACTCAGTAATTTAGAATACATTCTTCCTTCTATTATTCAGAACAAAGTTACATATATATAGGGAACAAAGAAACCCTAGACTAGGTATGTACAATGGCATGGAAGCCTGCTATATAGGGAACAAATATATTCTTCCTTCTATTGTTCAAACCCAAATCCACCCCAGAGACAAACTTAGAAGCCGGATAACTTCTCTTCCCTTTCTTTGTTCTTGGTTTATTTCTTGTATTTTGTCGTTCTAATGTGGGTTTTGTCTATGGAAGCCATGTTAAGCAAGATTTCTCATAGTTTTAGGGTAGATGAATTCTTAGGTTTAAATTGTTGAACACCTTGCTTCTTGAATATTAATTTACATTTACGCTTTTTAGCATTACCGTTCTTAATGCTTTTGAATGTTTGATCGATGTTTGAATGGTTCTATGATTTAAATCTTGCTTGAAAAAGTATGTTTAAATTAGATCATGCATGCTAGACTATTGTTTGAAAACACAAAAAGTAATTGGATAACAGTAGAGGTTGTTAATGAAGGTTTTTAATTCTTTGCTTAATCAACTAGTTTCAAGAAATTAGTAATTAGGGTTTAAGTAAAAGAAAATATTGCTTTCGAAAGATTCAATCCGGATAAAAAACTTCTAGATCTAGGTGTCTTGTTAATTACTTCAAGAGTCAAACAATTGTGTTTAATAATACCTTTGATGAAATCTATTTCCTAAAACGACTCTTAGTTGATAATTTCCATATCTTGATCACTTTTATTTGCTTTCTTAGATTAGTTTAGCTTTAGTGTCATTACAATCCGGTCCCCTAAATAAAATTGGAAGAACCTTTGAATAGCTAAAAGAATAATCAAACCGATTCCCTGAGAACGATGCTTGGCCTTTCAAGCCGTTTTAACTATATTATAACTTGACCTATACACTTGCGGTAACACCAAGTTGTGGCACATCAATAAGTTACTTCTCACCCAACAAACTCTTGTTAATGAGAGTGATAAGAAATGTATTGATGACTTGCTAGAAAGATCTCTAAGACTCTTAAAGTTGTTTGGTGTTGCTAAGGATGCATTGGTGCAAACACAAGAATGTGCACATGAACTTGAATTAGTTTTCTATAGAAGAAGAGGTGAAGGAATTATTCCAAGTGATCTTCAGATATACTTGAATTCTAGGAAAATAATTAAGAAGACAGTCCACAAGGACTTGAAAGGAATCAAAAGCAACTGTTCTAAAATAAAAGTGAAGAAAGTTCAGCAACCATTAACTTGTTAAAATATGTAGAAGCAATCACATTTAGCACCGTTGAATCAGTATTGTCCTTCCTAGCAAGACCAAAGTTGAGTCCATGGTCTTTGGTCTCCAAGATAGTGCAACCCCAAAGAGTAGCTTGGAAAGGAGAAGATGCATACACAAACAAAATAGAAATGGTCAATGGCACACTCTATTCAATTGCCAGTCAAACAACACATAAATCCAATTTCCTTCTGCAGGTCGAAAACGTGCATGTCTCATTGAATAAACTTGAGCCAAGTATCAGGATCTTGAAGAAAGGCATCTCATCAAAAACAGTCTCACTTCTGAAGATCCTAAATCACTAAGGCTAGAACTTAGATAGTAGTATGATGGCCATTGCCATTAGAATTCACTTTTGATAAATGTAAACACCAAATTCCGTATATATACCTTTCTGTGTCTATTAGGAATTGTTAAATTGCCGATTGACCCAAAAACTTAAGCTGATGTGCAAAGGAAAATTTAATCTTATATCATCAAAGACTCTTCCTAATGCAGGGTTTGAACAAAGAATCTCCTGAACCAACTTGCTCTGACATGTTAAATCGTCAATTAACCCAAAAACTTAAGTCAATGGATGAAGGCAAGTTTAAACTTATATCATCTAAGAGGAATAAGTCTTTTGTGATCAAAATCCAGATTGTAAGTTTACTATGTCTTCTTTCCAAACTAACTGTTCTGCAGTTTTTATATTATTCATACTGTGAAATGTTTGAAGGATGGAAAAATACACTATCCTTTATCATCTAAGAGTGGACATCAAAACCAAAAATACTGAAATAATTAAGAAACTGAACCAAACCAAAATTTTGGCTTTTATAATTAATGCAGTTCGGTTTGGTTCAGTTTAGGATTCAAAACCAAACCCCAAAACAGAATCTGACCGTGTTTGTGCATTATATATATTGCATTATATATATAAAGTAAAAGGCAGGAAAACAGAGGGGTCATTGTTTTTTTCATTTTTCTTTTTTTAAATAAATAGTTGTGAGTCTGAGGAGACCATGAAACCTAAAACCAAACCGAATAAAACCAAAAAAGTGCGGTTAGTTCAATTCTGACCAAATATGTGGTTTTACCTATCACTTGAACTATATTTTATTAACTAGAGATCAATTAGTAACCACACAGATTAGCTAATGAAACCAAGTTTTTGAATCTTGCTGTCAAGGAATCATATCCTTGGTGTATGATACTAGCTATGTCAACAGCACTCGTGCACTTCATAATTTATAAATTTCCCAGCAGAAAATTGCAGATTATGTTATATGTGTATGCTTAAACATTAAAGAAATAAATAATGAACTAAAAACCTGGTGATGGGGTGACATATCACAAACATGGCCTGACATATAGTTGAAAATAGATATATAATTTAATACACGTGTGAAGAAACAATCTTGTATTTATCAAGAGAGGCCCCAGTCACCTTTTCTTGATAAGAAAATAATCTTGAAGCCAATAGCTTGTATATGGAGAGATTTCTTATGCAATTAGAACAAATTAATTTAATTAGTTAATGTGCTGTAGACTCGGTGGAGTAGAGACATTGCCAAAACATCACTGCAAAGTTGTGTAG

mRNA sequence

ATGAAGCCGCCAACAAAAAAAGCAATCACATTTAGCACCGTTGAATCAGTATTGTCCTTCCTAGCAAGACCAAAGTTGAGTCCATGGTCTTTGGTCTCCAAGATAGTGCAACCCCAAAGAGTAGCTTGGAAAGGAGAAGATGCATACACAAACAAAATAGAAATGGTCAATGGCACACTCTATTCAATTGCCAGTCAAACAACACATAAATCCAATTTCCTTCTGCAGGTCGAAAACTTCGGTTTGGTTCAGTTTAGGATTCAAAACCAAACCCCAAAACAGAATCTGACCGTTTGTGAGTCTGAGGAGACCATGAAACCTAAAACCAAACCGAATAAAACCAAAAAAGTGCGACTCGGTGGAGTAGAGACATTGCCAAAACATCACTGCAAAGTTGTGTAG

Coding sequence (CDS)

ATGAAGCCGCCAACAAAAAAAGCAATCACATTTAGCACCGTTGAATCAGTATTGTCCTTCCTAGCAAGACCAAAGTTGAGTCCATGGTCTTTGGTCTCCAAGATAGTGCAACCCCAAAGAGTAGCTTGGAAAGGAGAAGATGCATACACAAACAAAATAGAAATGGTCAATGGCACACTCTATTCAATTGCCAGTCAAACAACACATAAATCCAATTTCCTTCTGCAGGTCGAAAACTTCGGTTTGGTTCAGTTTAGGATTCAAAACCAAACCCCAAAACAGAATCTGACCGTTTGTGAGTCTGAGGAGACCATGAAACCTAAAACCAAACCGAATAAAACCAAAAAAGTGCGACTCGGTGGAGTAGAGACATTGCCAAAACATCACTGCAAAGTTGTGTAG

Protein sequence

MKPPTKKAITFSTVESVLSFLARPKLSPWSLVSKIVQPQRVAWKGEDAYTNKIEMVNGTLYSIASQTTHKSNFLLQVENFGLVQFRIQNQTPKQNLTVCESEETMKPKTKPNKTKKVRLGGVETLPKHHCKVV
Homology
[Close]
BLAST of CmUC02G029430 vs. NCBI nr
Match: XP_022135909.1 (uncharacterized protein LOC111007747 [Momordica charantia])

HSP 1 Score: 97.1 bits (240), Expect = 1.3e-16
Identity = 52/77 (67.53%), Postives = 61/77 (79.22%), Query Frame = 0 

Query: 7   KAITFSTVESVLSFLA----RPKLSPWSLVSKIVQPQRVAWKGEDAYTNKIEMVNGTLYS 66
           +AIT+STVESVLSF+A      KLS WSLVSK+VQP+RVA   ED Y N++EMV+ TL S
Sbjct: 176 EAITYSTVESVLSFIAGSKLPSKLSRWSLVSKVVQPKRVACNSEDTYANEVEMVDATLNS 235

Query: 67  IASQTTHKSNFLLQVEN 80
           IAS TT KSNFL+QVEN
Sbjct: 236 IASHTTDKSNFLMQVEN 252

[Close]
BLAST of CmUC02G029430 vs. NCBI nr
Match: XP_022135735.1 (uncharacterized protein LOC111007625 [Momordica charantia])

HSP 1 Score: 85.5 bits (210), Expect = 3.8e-13
Identity = 51/104 (49.04%), Postives = 72/104 (69.23%), Query Frame = 0 

Query: 7   KAITFSTVESVLSFLARPKL----SPWSLVSKIVQPQRVAWKGEDAYTNKIEMVNGTLYS 66
           +A+TFS++ES+LSF+A PKL    S WSLVSK++QP+RVA K ED   N+ EMV+  LYS
Sbjct: 172 EAVTFSSIESLLSFIAGPKLPSKMSRWSLVSKLMQPKRVASKDEDTNGNEAEMVDVALYS 231

Query: 67  IASQTTHKSNFLLQVENFGLVQFRIQNQTPKQNLTVCESEETMK 107
           I   T+HKS+FL+QVEN       +QN   K  L++ + E+ ++
Sbjct: 232 I---TSHKSDFLVQVEN-------VQNSLRKLELSIPDLEDDLE 265

[Close]
BLAST of CmUC02G029430 vs. NCBI nr
Match: XP_022136146.1 (uncharacterized protein LOC111007910 [Momordica charantia])

HSP 1 Score: 84.7 bits (208), Expect = 6.4e-13
Identity = 43/77 (55.84%), Postives = 62/77 (80.52%), Query Frame = 0 

Query: 7   KAITFSTVESVLSFLARPKL----SPWSLVSKIVQPQRVAWKGEDAYTNKIEMVNGTLYS 66
           +A++++ +ES+LSF+A PKL    S WSLVSKIVQP+RVA + E+A TN++ +V+ TLYS
Sbjct: 179 EAVSYNVIESLLSFIAGPKLPSNSSRWSLVSKIVQPKRVACEVEEASTNEVAIVDATLYS 238

Query: 67  IASQTTHKSNFLLQVEN 80
           +ASQ T KS+ L+QV+N
Sbjct: 239 VASQKTKKSDLLVQVDN 255

[Close]
BLAST of CmUC02G029430 vs. NCBI nr
Match: XP_022953010.1 (uncharacterized protein LOC111455527 [Cucurbita moschata] >KAG6572162.1 hypothetical protein SDJN03_28890, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 84.3 bits (207), Expect = 8.4e-13
Identity = 46/74 (62.16%), Postives = 59/74 (79.73%), Query Frame = 0 

Query: 7   KAITFSTVESVLSFLARP----KLSPWSLVSKIVQPQRVAWKGEDAYTNKIEMVNGTLYS 66
           +A+T+STVESVLSF+A P    K+S WSLVSK+VQP+RVA K E AY N++EM++G LYS
Sbjct: 175 EAVTYSTVESVLSFIAGPKVPSKVSRWSLVSKLVQPKRVASKDEGAYANEVEMLDGILYS 234

Query: 67  IASQTTHKSNFLLQ 77
           +AS TT +S F LQ
Sbjct: 235 VASHTTDES-FSLQ 247

[Close]
BLAST of CmUC02G029430 vs. NCBI nr
Match: XP_004144941.1 (uncharacterized protein LOC101220720 [Cucumis sativus] >KGN43319.1 hypothetical protein Csa_020256 [Cucumis sativus])

HSP 1 Score: 83.2 bits (204), Expect = 1.9e-12
Identity = 45/66 (68.18%), Postives = 54/66 (81.82%), Query Frame = 0 

Query: 7   KAITFSTVESVLSFLARPKL-SPWSLVSKIVQPQRVAWKGEDAYTNKIEMVNGTLYSIAS 66
           +AITFST+ESVLSF+A PKL S WS VSK+VQ +RVA K EDAY N++EMV+ TL +IAS
Sbjct: 176 EAITFSTIESVLSFIAGPKLPSRWSFVSKLVQSKRVANKDEDAYENEVEMVDATLSAIAS 235

Query: 67  QTTHKS 72
            TT KS
Sbjct: 236 HTTDKS 241

[Close]
BLAST of CmUC02G029430 vs. ExPASy TrEMBL
Match: A0A6J1C2T6 (uncharacterized protein LOC111007747 OS=Momordica charantia OX=3673 GN=LOC111007747 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 6.1e-17
Identity = 52/77 (67.53%), Postives = 61/77 (79.22%), Query Frame = 0 

Query: 7   KAITFSTVESVLSFLA----RPKLSPWSLVSKIVQPQRVAWKGEDAYTNKIEMVNGTLYS 66
           +AIT+STVESVLSF+A      KLS WSLVSK+VQP+RVA   ED Y N++EMV+ TL S
Sbjct: 176 EAITYSTVESVLSFIAGSKLPSKLSRWSLVSKVVQPKRVACNSEDTYANEVEMVDATLNS 235

Query: 67  IASQTTHKSNFLLQVEN 80
           IAS TT KSNFL+QVEN
Sbjct: 236 IASHTTDKSNFLMQVEN 252

[Close]
BLAST of CmUC02G029430 vs. ExPASy TrEMBL
Match: A0A6J1C1V9 (uncharacterized protein LOC111007625 OS=Momordica charantia OX=3673 GN=LOC111007625 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.8e-13
Identity = 51/104 (49.04%), Postives = 72/104 (69.23%), Query Frame = 0 

Query: 7   KAITFSTVESVLSFLARPKL----SPWSLVSKIVQPQRVAWKGEDAYTNKIEMVNGTLYS 66
           +A+TFS++ES+LSF+A PKL    S WSLVSK++QP+RVA K ED   N+ EMV+  LYS
Sbjct: 172 EAVTFSSIESLLSFIAGPKLPSKMSRWSLVSKLMQPKRVASKDEDTNGNEAEMVDVALYS 231

Query: 67  IASQTTHKSNFLLQVENFGLVQFRIQNQTPKQNLTVCESEETMK 107
           I   T+HKS+FL+QVEN       +QN   K  L++ + E+ ++
Sbjct: 232 I---TSHKSDFLVQVEN-------VQNSLRKLELSIPDLEDDLE 265

[Close]
BLAST of CmUC02G029430 vs. ExPASy TrEMBL
Match: A0A6J1C2Q0 (uncharacterized protein LOC111007910 OS=Momordica charantia OX=3673 GN=LOC111007910 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 3.1e-13
Identity = 43/77 (55.84%), Postives = 62/77 (80.52%), Query Frame = 0 

Query: 7   KAITFSTVESVLSFLARPKL----SPWSLVSKIVQPQRVAWKGEDAYTNKIEMVNGTLYS 66
           +A++++ +ES+LSF+A PKL    S WSLVSKIVQP+RVA + E+A TN++ +V+ TLYS
Sbjct: 179 EAVSYNVIESLLSFIAGPKLPSNSSRWSLVSKIVQPKRVACEVEEASTNEVAIVDATLYS 238

Query: 67  IASQTTHKSNFLLQVEN 80
           +ASQ T KS+ L+QV+N
Sbjct: 239 VASQKTKKSDLLVQVDN 255

[Close]
BLAST of CmUC02G029430 vs. ExPASy TrEMBL
Match: A0A6J1GNH6 (uncharacterized protein LOC111455527 OS=Cucurbita moschata OX=3662 GN=LOC111455527 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 4.1e-13
Identity = 46/74 (62.16%), Postives = 59/74 (79.73%), Query Frame = 0 

Query: 7   KAITFSTVESVLSFLARP----KLSPWSLVSKIVQPQRVAWKGEDAYTNKIEMVNGTLYS 66
           +A+T+STVESVLSF+A P    K+S WSLVSK+VQP+RVA K E AY N++EM++G LYS
Sbjct: 175 EAVTYSTVESVLSFIAGPKVPSKVSRWSLVSKLVQPKRVASKDEGAYANEVEMLDGILYS 234

Query: 67  IASQTTHKSNFLLQ 77
           +AS TT +S F LQ
Sbjct: 235 VASHTTDES-FSLQ 247

[Close]
BLAST of CmUC02G029430 vs. ExPASy TrEMBL
Match: A0A0A0K2S2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G023930 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 9.1e-13
Identity = 45/66 (68.18%), Postives = 54/66 (81.82%), Query Frame = 0 

Query: 7   KAITFSTVESVLSFLARPKL-SPWSLVSKIVQPQRVAWKGEDAYTNKIEMVNGTLYSIAS 66
           +AITFST+ESVLSF+A PKL S WS VSK+VQ +RVA K EDAY N++EMV+ TL +IAS
Sbjct: 176 EAITFSTIESVLSFIAGPKLPSRWSFVSKLVQSKRVANKDEDAYENEVEMVDATLSAIAS 235

Query: 67  QTTHKS 72
            TT KS
Sbjct: 236 HTTDKS 241

The following BLAST results are available for this feature:
BLAST of CmUC02G029430 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022135909.11.3e-1667.53uncharacterized protein LOC111007747 [Momordica charantia][more]
XP_022135735.13.8e-1349.04uncharacterized protein LOC111007625 [Momordica charantia][more]
XP_022136146.16.4e-1355.84uncharacterized protein LOC111007910 [Momordica charantia][more]
XP_022953010.18.4e-1362.16uncharacterized protein LOC111455527 [Cucurbita moschata] >KAG6572162.1 hypothet... [more]
XP_004144941.11.9e-1268.18uncharacterized protein LOC101220720 [Cucumis sativus] >KGN43319.1 hypothetical ... [more]
BLAST of CmUC02G029430 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CmUC02G029430 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1C2T66.1e-1767.53uncharacterized protein LOC111007747 OS=Momordica charantia OX=3673 GN=LOC111007... [more]
A0A6J1C1V91.8e-1349.04uncharacterized protein LOC111007625 OS=Momordica charantia OX=3673 GN=LOC111007... [more]
A0A6J1C2Q03.1e-1355.84uncharacterized protein LOC111007910 OS=Momordica charantia OX=3673 GN=LOC111007... [more]
A0A6J1GNH64.1e-1362.16uncharacterized protein LOC111455527 OS=Cucurbita moschata OX=3662 GN=LOC1114555... [more]
A0A0A0K2S29.1e-1368.18Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G023930 PE=4 SV=1[more]
BLAST of CmUC02G029430 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004320Protein of unknown function DUF241, plantPFAMPF03087DUF241coord: 7..75
e-value: 2.7E-5
score: 24.1

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC02G029430.1CmUC02G029430.1mRNA