CmUC02G028910 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC02G028910
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Pentatricopeptide repeat-containing protein
Location	CmU531Chr02: 2854701 .. 2860049 (-)
RNA-Seq Expression	CmUC02G028910
Synteny	CmUC02G028910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGCGTTACAATTTCAATCTCGTCTTCGAGTTTCGAAGATTTTTTCTTCAACAATTTGGAAATGGGAAAGAGAATTTCCTCTGCTCCGCGATCCATTGCGAATGTCGGATTTCTCACTCTCACCGGCGCAATCTCGCTGTTTTAGCTCCAATTCCATGGATGACGATTGGGCCTTCTCAAAGTCCCAGCCGAGAGGCAGCCCGCCACAACGGCGTTCTCCTCCGGATCATCGCGAACCTCGTCGGAATCAACGATTTAATAGGCACTCGGAAGGTTCCCCGTCTCGATTCGCAGATGAAGGGTCAATTTCGCTGCAAAGGAGCGAATCTTTTTCTCAGAAGGATTTTAGCTTTCTTGAAAAATTCAAGCTGAACACTGATAATCAGAGTAGTAGTAAAGAGAAGACTGAGGAGAGCTCTTCTGCTCGGTTATCTGAAATAACGTGGAAGAAGCAGTTGCAACCGCAGCCTTCTCCAGAAGCCGATGAGACATTCGGGCAAATGAAGAAGACTGAGGAGAGCTCTTCTGCTTCCCAACCGCAGCGTTCTCCAGAAGCCGATGAGATATTCAGGCAAATGAAGAAGACTGGTCTGATTCCCAACGCTGTCGCTATGCTTGATGGGCTTTGTAAAGATGGACTTATTCAAGAAGCAATGAAACTATTTGGTTTGATTCGTGAAAAGGGTACAATTCCAGAAGTTGTGATTTACACTGCTGTCGTTGATGGGTTTTGCAAGGCGGAGAAGCTTGATGAAGCAATTAGGATTTTCAGGAAAATGCAGAATAATGGCATTTCTCCCAATGCCTTTAGTTTTGGCGTCTTGATACAGGGACTGTACAAATGCAAAAAAATAGAGGATGCTGTAGCATTTTGCATTGAGATGTTAGAATCTGGACATACTCCAAATCTAACCACTTTTGTTGGCTTAATTGATGGGTTATGCAATGAGAAGGGCGTGGACGAAGCTCATAGTGTCGTAGAAACCTTGAAACAAAAGGGATTCTTGATTAATGAGAATTCTTTAAGGGAATTTTTGAATAAAAGAACCCCATTTTCACCACATATCTGGGAAGTGATCTTTGGGAAGAAAACGAAGGGACTTTTCTGAGATTGTTGTCGTAGTTTAGAAGTTGTAAGTCCTTTTTCTTTTCCCTTTTATGTAATTCCTTCGCTAGTTCAAGTTTTGTTTACTATATATTATATGAAGTAGTTTGAATAGATGATCGACATGTTTACAACAAATTATTTTCAATCTTTTGATAGCTTCTATAAGCTTGTATGAATTGTTGGGTGCGAAAATGATAAGGTACGAAACAAGGAAAGGGAGAAAAGGAGAATAGCCCGTTTGTTACCTTAGTCTTTACAATCTTTACAACTTATCATATGGTATTTAGTTTAATCAGATTTTATTAAAATTCTCTTATCTTCATCAGCATTCAAGGATGGTTATGATTTATAGAATTGGTGGCTCATGTAACTCTTTTAGGATAGGTTTTAACTAATTTATAAGAGAAAAATAACCTAACAAATGAAAGAATACATGACCATCCATGAAACCAAGCCCACAAAAGGGAGTGCCACTAAAGAAAGGGATTCCATTTGTGTAAAATGATTCCTAACTGAATAATTACAAAAGACCTTCATTCCTGAAGCCAAAAGACCTTTTGGATTTTAACCATTATTTATACTTACGAAGACATCTGTATCTTCCCCCCTCCCTCTCCCCCACTCTCATTTTCTTTTTGTTATCTTCACGCAGACATAACGTTGCCTAAGCGAATATTGATTTTTCTCTGGTCTACCTCAAGCTTACTGCACAAGTTTACAAGTTTTAGAATCACTCAACATAAAGCTAGCCCAACCTATAACCAAGGACAATAAGATAAGCACACACATTAAAAGCTCCCAAAATCACTCACACAAGCATAAACATATGAGAACTTAGGTGTAAATCTTACTTAGTGTTGTTGATTCCCCCTCCTGCCTTTCTCCTCCTTCCTCATTTTCTCCTTCTTATCAACACCAGCAGGAAGTGCAAAAGTTTACATGGATAAAACCACTTTAAGCTCACCCAATTGGAAAGGTTCAAATTGCCTTTAAATGATGCACAAAGTTTCTTGTCTGCATCAGCATATTCATCACTGTTATGTCAGACTAAGAATTGTGTGTGCATTTCTCACTACATCGTTAATTACATTTTCAATCCAGAAGAATAACTGATTGTGAAGATTTTGACTTGGATGCTCAATGAGGGATCACAATCGTAAGGTTCTTAAATATTTGCAAGCAAAGTTGCATTCTTATGGGAGAATCTTTTCACTAGTGGATGGAACTCAACTTGAGACTAGATTATTTCATTTTGGGATTGATGAGTGGAAGTTCGTACACAATATTATGTTCCAGATTGTTTGGTTATTAGTATTATGATGGATCAAGTAGGAGTATTTAATAAGGTCGCATAGTTTATATTCTGTTAGTTATGGCTAAGGTTACGCAGCTCTCAGGTGTAAATGCTTATCTGATGATGATGATTATGCAGGTGAAGCTACCAATCACATCACTGAGAAGAAACCACAAGTTGAAATCATTGGATCTCAGTAGCCAGAATGTAATGATTGTGTTGAAGAAAATCTGGTTGAAGAGCGAAGAATCTCTACAACTATTGAAGTGAGCTCTAAAAGCTGGTCAAGTTTTGGGGAACACAAAACTTGTGCCGTCAAGTTCATTGACCTTTGGTGAAAGATTGTGTGGATCAATCGACAGGGAAAAGATTAGCTATTTTTTGCAAGATTGAACATCAGAAAATGTGTTAAATTTACCCTTTACCTCTTAGATTTTTTTTTTCTTTGAACCAACAATTATGTAAGTTCTGAATATGTAATTGCTTCCTACCACTAATGCCTATTCAGAGATTGTTTTGTTTTGTTTATTTTTTTCAGGCTTAACTTCCCTTCTTTGATTATTAAAGTGCTCTCAGTGAATAAAAGGTTTTAATTACTAATCAACTCAAAAGTCTAACTTAATTGATTGATTGGTGATTTAACATGATATAAGAGCAGGAAGTCTTGTATTTGAACTTTTATTATGTCGTTTCCTCTCCAATAAATAGTATTGGTTTCTACTTGTAAATCTTTTACAAATTTTCAAGCCCACAAGTAACGAGAATTTAAATGTTGGTATCATTTGAATGCAATCCGAGGGTTTTTCATAAAAAGTCTTTACCATGAGATGATTGGTTTGGTTCTCCTCGTCTAAAGGCCTCTTCATGGTGCACGCTCTCTCTCTAAAAGCTTTGTAGGACATACTATTTAGGTTATTTTTCTTAATTGGAATGCATGGATGTTAGCCTCTCTTTAACTTACTTTTGTATTATTGTTTCTTTTATCTCTTACTTTGGATTCTTGTACTTTTGAGCATTGCTTCTTTTCATTTTATCAATGGAAAGTGTTTGATTGTTTCCTTTAAAAAGAAAAAGCTTTTGAAACATGAAGGAAGTATCCTTGATTGTCGATTCTCTATGTTGAGTTCTGTTCATGGCTGTACTCCTCTCTGTTATATTATATTTAATTCAGGTGAGAAGAGTGAAGAATATGGAACAGACACACCATCTGGCTTTGGAGGGGAGAATGAGAAAGGAAGCCCACGTTCCAAGGTACCCATTTATTTTAAAGCTAAAGCACAACTCATCATATATATATATATATATATTTTGTTTAGAGGAGCAAGGATGATTTGGTCGGTATTATTCTATCTTGAACTGCAAGATTAGTCAAAACCTGGGAAGAGGACTCAAGGGAGGTGGATTCTCTTGTTTTGTTATTGTTAATTGTTATTACAAGTGAAATGAAAGGGTGGAATTAAGATATGAATTGAAGATTTTGGTATCATGTGAATGTTTAGATACTTGAGGCATTGACTAACTTATTAAGTTTTGAGTGCAAGGTGGGGTCGGCGCCGGCCCTCCTTTCCAGCCGGAATCATGGTTCTAACACACTAAAATATTAAAAAAGAAACTCAAATGGATTTTAGAAAATCTTCGCCTCACGAATTTTGAGGGGTTTTTCTTTCTCAATAAAATGTGGGTGGATGAGTGGAGATTTGAACTTTTGACTTTTTAGTTGATGGTATATGTTTTAATCAGTTGAGCTATGGTTTCGGTGAGTAGAATTTTGAGGCTCAAGTTCATATCTCGTATGGATGCTTTCCCTTTTAGTTATTAATCGTTAAATTTATAGGCTACATGAATTCAAGTGCATAAAATCAATGATTTAAATCATTGCACGCTAACTTTACAAATAATAAACTCTTTTCTTTGCACAAGTAGATGGAGGTGTTCGCAATTTAATTTGGCTACCGAACTAAACCAGAAAATTTAGTTTTGGATATACACCAAACCGATCTGATGGTTTGGTGTTTTATTATATATATAATATATCTAAACAGCTCTTGGTTTTTGGTATTATATATATAAATTGTTTGGTTTAGTTTTGGGTTTTTTATTTTATATATATAGAATAATATAGATGGTTGGTTCTGTTTTCAAATCCAAGACTAAATTTTCAATTCAATTCAATTCAGTTCAATCTTGTCATCCAATTCGATTTGGTTGGTTTAAGTGAACACAGCCAGAAGCAGTGGATTTATTGGCCCAGCATTGTGTGTATTGTTGGGTACAACAAGATTGGTCAGTATCATATGGATCAGTATTATATAGGTTCTCATCTTTACATGTAAAATTAAGCTTCTCAAACCCAAAATTTATAATCTATATATACTATATTATGAGTCAAATATTCTTGATTGGTTATATTCCTCCAAAAGTCAAGGCCTGAAGTCAACCCCACCTGATTATGGTAAGCCAAGTTTCTACTATATAAATGCCTCTTTCTTCCATTGTTACATAAACCAACAGAGAAGAAAAAGAAGCTGCTGGTCTTGAGTTTTTTCTTTTGGCAGAATGATAGGCTTGGCATTATGTAGAGGTTCAATGTGCATAGCCACCATTGTCTTCTTAACTTGTGTGTGGATCCCTCTTCTTCAACTGAAGGCAGCCATAGCGAGAATGTTCGGCGTTCTATCGAGCAGGACGTGTCAGACAGTCGCAACGGCGTCGCCACCATTTGAGGTAGAACTTCTGGTTTGTAGGTTCAAAGAGCTGCAACGTGCAGGCGGATCGGAGGAGGAGATTTGCTCCGTTTGCTTGTCGGAGTTCACCGAAGAAGATTTGGTGAGCCAATTGCATAGATGTAGCCATGTTTTCCATCTAGAATGTATTGAGAATTGGCTACAAAGAAACCACTTTACTTGCCCTCTTTGCAGATCCCTCCTCTTCCAAGCATTGTAA

mRNA sequence

ATGGGGGCGTTACAATTTCAATCTCGTCTTCGAGTTTCGAAGATTTTTTCTTCAACAATTTGGAAATGGGAAAGAGAATTTCCTCTGCTCCGCGATCCATTGCGAATGTCGGATTTCTCACTCTCACCGGCGCAATCTCGCTGTTTTAGCTCCAATTCCATGGATGACGATTGGGCCTTCTCAAAGTCCCAGCCGAGAGGCAGCCCGCCACAACGGCGTTCTCCTCCGGATCATCGCGAACCTCGTCGGAATCAACGATTTAATAGGCACTCGGAAGGTTCCCCGTCTCGATTCGCAGATGAAGGGTCAATTTCGCTGCAAAGGAGCGAATCTTTTTCTCAGAAGGATTTTAGCTTTCTTGAAAAATTCAAGCTGAACACTGATAATCAGAGTAGTAGTAAAGAGAAGACTGAGGAGAGCTCTTCTGCTCGGTTATCTGAAATAACGTGGAAGAAGCAGTTGCAACCGCAGCCTTCTCCAGAAGCCGATGAGACATTCGGGCAAATGAAGAAGACTGAGGAGAGCTCTTCTGCTTCCCAACCGCAGCGTTCTCCAGAAGCCGATGAGATATTCAGGCAAATGAAGAAGACTGGTCTGATTCCCAACGCTGTCGCTATGCTTGATGGGCTTTGTAAAGATGGACTTATTCAAGAAGCAATGAAACTATTTGGTTTGATTCGTGAAAAGGGTACAATTCCAGAAGTTGTGATTTACACTGCTGTCGTTGATGGGTTTTGCAAGGCGGAGAAGCTTGATGAAGCAATTAGGATTTTCAGGAAAATGCAGAATAATGGCATTTCTCCCAATGCCTTTAGTTTTGGCGTCTTGATACAGGGACTGTACAAATGCAAAAAAATAGAGGATGCTGTAGCATTTTGCATTGAGATGTTAGAATCTGGACATACTCCAAATCTAACCACTTTTGTTGGCTTAATTGATGGGTTATGCAATGAGAAGGGCGTGGACGAAGCTCATAGTGTCGTAGAAACCTTGAAACAAAAGGGATTCTTGATTAATGAGAATTCTTTAAGGGAATTTTTGAATAAAAGAACCCCATTTTCACCACATATCTGGGAAGTGAAGCTACCAATCACATCACTGAGAAGAAACCACAAGTTGAAATCATTGGATCTCAGTAGCCAGAATGTGAGAAGAGTGAAGAATATGGAACAGACACACCATCTGGCTTTGGAGGGGAGAATGAGAAAGGAAGCCCACGTTCCAAGAATGATAGGCTTGGCATTATGTAGAGGTTCAATGTGCATAGCCACCATTGTCTTCTTAACTTGTGTGTGGATCCCTCTTCTTCAACTGAAGGCAGCCATAGCGAGAATGTTCGGCGTTCTATCGAGCAGGACGTGTCAGACAGTCGCAACGGCGTCGCCACCATTTGAGGTAGAACTTCTGGTTTGTAGGTTCAAAGAGCTGCAACGTGCAGGCGGATCGGAGGAGGAGATTTGCTCCGTTTGCTTGTCGGAGTTCACCGAAGAAGATTTGGTGAGCCAATTGCATAGATGTAGCCATGTTTTCCATCTAGAATGTATTGAGAATTGGCTACAAAGAAACCACTTTACTTGCCCTCTTTGCAGATCCCTCCTCTTCCAAGCATTGTAA

Coding sequence (CDS)

ATGGGGGCGTTACAATTTCAATCTCGTCTTCGAGTTTCGAAGATTTTTTCTTCAACAATTTGGAAATGGGAAAGAGAATTTCCTCTGCTCCGCGATCCATTGCGAATGTCGGATTTCTCACTCTCACCGGCGCAATCTCGCTGTTTTAGCTCCAATTCCATGGATGACGATTGGGCCTTCTCAAAGTCCCAGCCGAGAGGCAGCCCGCCACAACGGCGTTCTCCTCCGGATCATCGCGAACCTCGTCGGAATCAACGATTTAATAGGCACTCGGAAGGTTCCCCGTCTCGATTCGCAGATGAAGGGTCAATTTCGCTGCAAAGGAGCGAATCTTTTTCTCAGAAGGATTTTAGCTTTCTTGAAAAATTCAAGCTGAACACTGATAATCAGAGTAGTAGTAAAGAGAAGACTGAGGAGAGCTCTTCTGCTCGGTTATCTGAAATAACGTGGAAGAAGCAGTTGCAACCGCAGCCTTCTCCAGAAGCCGATGAGACATTCGGGCAAATGAAGAAGACTGAGGAGAGCTCTTCTGCTTCCCAACCGCAGCGTTCTCCAGAAGCCGATGAGATATTCAGGCAAATGAAGAAGACTGGTCTGATTCCCAACGCTGTCGCTATGCTTGATGGGCTTTGTAAAGATGGACTTATTCAAGAAGCAATGAAACTATTTGGTTTGATTCGTGAAAAGGGTACAATTCCAGAAGTTGTGATTTACACTGCTGTCGTTGATGGGTTTTGCAAGGCGGAGAAGCTTGATGAAGCAATTAGGATTTTCAGGAAAATGCAGAATAATGGCATTTCTCCCAATGCCTTTAGTTTTGGCGTCTTGATACAGGGACTGTACAAATGCAAAAAAATAGAGGATGCTGTAGCATTTTGCATTGAGATGTTAGAATCTGGACATACTCCAAATCTAACCACTTTTGTTGGCTTAATTGATGGGTTATGCAATGAGAAGGGCGTGGACGAAGCTCATAGTGTCGTAGAAACCTTGAAACAAAAGGGATTCTTGATTAATGAGAATTCTTTAAGGGAATTTTTGAATAAAAGAACCCCATTTTCACCACATATCTGGGAAGTGAAGCTACCAATCACATCACTGAGAAGAAACCACAAGTTGAAATCATTGGATCTCAGTAGCCAGAATGTGAGAAGAGTGAAGAATATGGAACAGACACACCATCTGGCTTTGGAGGGGAGAATGAGAAAGGAAGCCCACGTTCCAAGAATGATAGGCTTGGCATTATGTAGAGGTTCAATGTGCATAGCCACCATTGTCTTCTTAACTTGTGTGTGGATCCCTCTTCTTCAACTGAAGGCAGCCATAGCGAGAATGTTCGGCGTTCTATCGAGCAGGACGTGTCAGACAGTCGCAACGGCGTCGCCACCATTTGAGGTAGAACTTCTGGTTTGTAGGTTCAAAGAGCTGCAACGTGCAGGCGGATCGGAGGAGGAGATTTGCTCCGTTTGCTTGTCGGAGTTCACCGAAGAAGATTTGGTGAGCCAATTGCATAGATGTAGCCATGTTTTCCATCTAGAATGTATTGAGAATTGGCTACAAAGAAACCACTTTACTTGCCCTCTTTGCAGATCCCTCCTCTTCCAAGCATTGTAA

Protein sequence

MGALQFQSRLRVSKIFSSTIWKWEREFPLLRDPLRMSDFSLSPAQSRCFSSNSMDDDWAFSKSQPRGSPPQRRSPPDHREPRRNQRFNRHSEGSPSRFADEGSISLQRSESFSQKDFSFLEKFKLNTDNQSSSKEKTEESSSARLSEITWKKQLQPQPSPEADETFGQMKKTEESSSASQPQRSPEADEIFRQMKKTGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLYKCKKIEDAVAFCIEMLESGHTPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINENSLREFLNKRTPFSPHIWEVKLPITSLRRNHKLKSLDLSSQNVRRVKNMEQTHHLALEGRMRKEAHVPRMIGLALCRGSMCIATIVFLTCVWIPLLQLKAAIARMFGVLSSRTCQTVATASPPFEVELLVCRFKELQRAGGSEEEICSVCLSEFTEEDLVSQLHRCSHVFHLECIENWLQRNHFTCPLCRSLLFQAL

Homology

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BLAST of CmUC02G028910 vs. NCBI nr
Match: XP_038888880.1 (pentatricopeptide repeat-containing protein At4g38150 isoform X1 [Benincasa hispida])

HSP 1 Score: 540.0 bits (1390), Expect = 2.3e-149
Identity = 292/376 (77.66%), Postives = 307/376 (81.65%), Query Frame = 0


Query: 3   ALQFQSRLRVSKIFSSTIWKWEREFPLLRDPLRMSDFSLSPAQSRCFSSNSMDDDWAFSK 62
           A QFQSRLRV KI SSTI KWER+FPLL D LRM +FSLSPAQSRCF+SNS+DDDWAFSK
Sbjct: 2   AFQFQSRLRVWKILSSTIRKWERDFPLLHDSLRMPNFSLSPAQSRCFASNSIDDDWAFSK 61

Query: 63  SQPRGSPPQRRS-PPDHREPR-----------------RNQRFNRHSEGSPSRFADEGSI 122
           S+PR SPPQRRS PPDHRE R                 RNQRFNR SEGS SRFA+E SI
Sbjct: 62  SEPRTSPPQRRSPPPDHREARRVPNFNKEVSAPFPDDNRNQRFNRRSEGSSSRFANEASI 121

Query: 123 SLQRSESFSQKDFSFLEKFKLNTDNQSSSKEKTEESSSARLSEITWKKQLQPQPSPEADE 182
           S QR+ES +QKDFSFLE+FKLNTDNQSSS EKTEESSSARLSE   +KQ           
Sbjct: 122 SRQRNESLTQKDFSFLERFKLNTDNQSSSIEKTEESSSARLSESMQEKQ----------- 181

Query: 183 TFGQMKKTEESSSASQPQRSPEADEIFRQMKKTGLIPNAVAMLDGLCKDGLIQEAMKLFG 242
                         SQPQR PEADEIFR+MK+TGLIPNAVAMLDGLCKDGLIQEAMKLF 
Sbjct: 182 --------------SQPQRPPEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFA 241

Query: 243 LIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLYKCK 302
           LIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGI PNAFSFGVLIQGLYKCK
Sbjct: 242 LIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCK 301

Query: 303 KIEDAVAFCIEMLESGHTPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINENSLR 361
           K+EDAVAFCIEMLESGH+PNL TFVGLID LCNEKGVDEAHSVVETLKQKGFLINE +LR
Sbjct: 302 KLEDAVAFCIEMLESGHSPNLNTFVGLIDELCNEKGVDEAHSVVETLKQKGFLINEKALR 352

[Close]

BLAST of CmUC02G028910 vs. NCBI nr
Match: XP_022969144.1 (pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima] >XP_022969146.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima])

HSP 1 Score: 521.5 bits (1342), Expect = 8.3e-144
Identity = 281/379 (74.14%), Postives = 300/379 (79.16%), Query Frame = 0


Query: 1   MGAL--QFQSRLRVSKIFSSTIWKWEREFPLLRDPLRMSDFSLSPAQSRCFSSNSMDDDW 60
           MGAL  Q QSRLRVSKI  STI  WER FPLL DPLR  D SLSP +SRCFSSNSMDDDW
Sbjct: 1   MGALQMQLQSRLRVSKILFSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  AFSKSQPRGSPPQRRSPPDHREPR-----------------RNQRFNRHSEGSPSRFADE 120
            FS+S+PR SPPQRRSPPD RE R                 RNQRFNRH EGS SRFA+E
Sbjct: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHWEGSESRFANE 120

Query: 121 GSISLQRSESFSQKDFSFLEKFKLNTDNQSSSKEKTEESSSARLSEITWKKQLQPQPSPE 180
           G +S +RSES SQKDFSFLEKFKLNTDN S+S EKTE SSSA+ SE    KQ        
Sbjct: 121 GPMSRRRSESLSQKDFSFLEKFKLNTDNLSTSTEKTEPSSSAQFSESMQGKQ-------- 180

Query: 181 ADETFGQMKKTEESSSASQPQRSPEADEIFRQMKKTGLIPNAVAMLDGLCKDGLIQEAMK 240
                            SQPQ  PEADEIFR+MK+TGLIPNAVAMLDGLCKDGLIQEAMK
Sbjct: 181 -----------------SQPQCPPEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMK 240

Query: 241 LFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLY 300
           LFGLIREKGTIPEVV+YTAVVDGFCKAE LDEAIRIFRKMQNNGISPNAFS+GVLIQGLY
Sbjct: 241 LFGLIREKGTIPEVVVYTAVVDGFCKAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLY 300

Query: 301 KCKKIEDAVAFCIEMLESGHTPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINEN 360
           KCKK+EDAV+FCIEMLESGH+PNLTTFVGLID LC EKGVDEAH+V+ETLKQKGFLINE 
Sbjct: 301 KCKKLEDAVSFCIEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEK 354

[Close]

BLAST of CmUC02G028910 vs. NCBI nr
Match: XP_022952706.1 (pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita moschata] >XP_022952707.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita moschata])

HSP 1 Score: 519.2 bits (1336), Expect = 4.1e-143
Identity = 278/379 (73.35%), Postives = 301/379 (79.42%), Query Frame = 0


Query: 1   MGAL--QFQSRLRVSKIFSSTIWKWEREFPLLRDPLRMSDFSLSPAQSRCFSSNSMDDDW 60
           MGAL  Q QSRLRVSKI SSTI  WER FPLL DPLR  D SLSP +SRCFSSNSMDDDW
Sbjct: 1   MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  AFSKSQPRGSPPQRRSPPDHREPR-----------------RNQRFNRHSEGSPSRFADE 120
            FS+S+PR SPPQRRSPPD RE R                 RNQRFNRHSEGS SRFA++
Sbjct: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHSEGSSSRFAND 120

Query: 121 GSISLQRSESFSQKDFSFLEKFKLNTDNQSSSKEKTEESSSARLSEITWKKQLQPQPSPE 180
           G +S  R+ES SQKDFSFLEKFKLNTDNQS+S EK E SSSA++SE    KQ        
Sbjct: 121 GPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQ-------- 180

Query: 181 ADETFGQMKKTEESSSASQPQRSPEADEIFRQMKKTGLIPNAVAMLDGLCKDGLIQEAMK 240
                            SQPQ  PEADEIFR+MK+TGLIPNAVAMLDGLCKDGLIQEAMK
Sbjct: 181 -----------------SQPQCPPEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMK 240

Query: 241 LFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLY 300
           LFGLIREKGTIPEVV+YTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFS+G+LIQGLY
Sbjct: 241 LFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLY 300

Query: 301 KCKKIEDAVAFCIEMLESGHTPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINEN 360
           K K++EDAV+FCIEMLESGH+PNLTTFVGLID LC EKGVDEAH+V+ETLKQKGFLINE 
Sbjct: 301 KSKQLEDAVSFCIEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEK 354

[Close]

BLAST of CmUC02G028910 vs. NCBI nr
Match: KAG7011839.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 518.8 bits (1335), Expect = 5.4e-143
Identity = 279/379 (73.61%), Postives = 298/379 (78.63%), Query Frame = 0


Query: 1   MGAL--QFQSRLRVSKIFSSTIWKWEREFPLLRDPLRMSDFSLSPAQSRCFSSNSMDDDW 60
           MGAL  Q QSRLRVSKI SSTI  WER FPLL DPLR  D SLSP +SRCFSSNSMDDDW
Sbjct: 1   MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  AFSKSQPRGSPPQRRSPPDHREPR-----------------RNQRFNRHSEGSPSRFADE 120
            FSKS+PR SPPQRRSPPD RE R                 RNQRFNRHSEGS SRFA+E
Sbjct: 61  NFSKSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHSEGSSSRFANE 120

Query: 121 GSISLQRSESFSQKDFSFLEKFKLNTDNQSSSKEKTEESSSARLSEITWKKQLQPQPSPE 180
           G +S  R+ES SQKDFSFLEKFKLNTDNQS+S EK E SSSA+ SE    KQ        
Sbjct: 121 GPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGKQ-------- 180

Query: 181 ADETFGQMKKTEESSSASQPQRSPEADEIFRQMKKTGLIPNAVAMLDGLCKDGLIQEAMK 240
                            SQPQ  PEADEIFR+MK+TGLIPNAVAMLDGLCKDGLIQEAMK
Sbjct: 181 -----------------SQPQCPPEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMK 240

Query: 241 LFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLY 300
           LFGLIREKGTIPEVV+YTAVVDGFCKAEK DEAIRIFRKMQNNGISPNAFS+G+LIQGLY
Sbjct: 241 LFGLIREKGTIPEVVVYTAVVDGFCKAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLY 300

Query: 301 KCKKIEDAVAFCIEMLESGHTPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINEN 360
           K K++EDAV+FC EMLESGH+PNLTTFVGLID LC EKGVDEAH+V+ETLKQKGFLINE 
Sbjct: 301 KSKQLEDAVSFCFEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEK 354

[Close]

BLAST of CmUC02G028910 vs. NCBI nr
Match: XP_023554525.1 (pentatricopeptide repeat-containing protein At4g38150-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023554526.1 pentatricopeptide repeat-containing protein At4g38150-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 518.1 bits (1333), Expect = 9.2e-143
Identity = 278/379 (73.35%), Postives = 301/379 (79.42%), Query Frame = 0


Query: 1   MGAL--QFQSRLRVSKIFSSTIWKWEREFPLLRDPLRMSDFSLSPAQSRCFSSNSMDDDW 60
           MGAL  Q QSRLRVSKI SSTI  WER FPLL DPLR  D SLSP +SRCFSSNSMDDDW
Sbjct: 1   MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  AFSKSQPRGSPPQRRSPPDHREPR-----------------RNQRFNRHSEGSPSRFADE 120
            FS+S+PR SPPQRRSPPD RE R                 RNQRFNRHSEGS SRFA+E
Sbjct: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEGSAPYPEDNRNQRFNRHSEGSSSRFANE 120

Query: 121 GSISLQRSESFSQKDFSFLEKFKLNTDNQSSSKEKTEESSSARLSEITWKKQLQPQPSPE 180
           G +S +R+ES SQKDFSFLEKFKLNTDNQS+S EK E SSSA+ SE    +Q        
Sbjct: 121 GPMSRRRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGEQ-------- 180

Query: 181 ADETFGQMKKTEESSSASQPQRSPEADEIFRQMKKTGLIPNAVAMLDGLCKDGLIQEAMK 240
                            SQPQ  PEADEIFR+MK+TGLIPNAVAMLDGLCKDGLIQEAMK
Sbjct: 181 -----------------SQPQCPPEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMK 240

Query: 241 LFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLY 300
           LFGLIREKGTIPEVV+YTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFS+G+LIQGLY
Sbjct: 241 LFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLY 300

Query: 301 KCKKIEDAVAFCIEMLESGHTPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINEN 360
           K K++EDAV+FCIEMLESGH+PNLTTFVGLID LC EKG DEAH+V+ETLKQKGFLINE 
Sbjct: 301 KSKQLEDAVSFCIEMLESGHSPNLTTFVGLIDELCKEKGEDEAHTVIETLKQKGFLINEK 354

[Close]

BLAST of CmUC02G028910 vs. ExPASy Swiss-Prot
Match: Q9SZL5 (Pentatricopeptide repeat-containing protein At4g38150 OS=Arabidopsis thaliana OX=3702 GN=At4g38150 PE=2 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.6e-68
Identity = 146/302 (48.34%), Postives = 194/302 (64.24%), Query Frame = 0


Query: 60  FSKSQPRGSPPQRRSPPD--HREPRRNQRFNRHSEGSPSRFADEGSISLQRSESFSQKDF 119
           F  +   G   ++++PP+     P R +R +      P+R A     +L +S++ +  D 
Sbjct: 30  FLSTGDNGQVDEQQNPPEPLPNRPLRGERSSNSHREPPARQAH----NLGKSDT-TLSDD 89

Query: 120 SFLEKFKLNTDNQSSSKEKTEESSSARLSEITWKKQLQPQPSPEADETFGQMKKTEESSS 179
            FLE+FKL  +  S    K E+               +P P PE                
Sbjct: 90  GFLEQFKLGVNQDSRETPKPEQYPQ------------EPLPPPE---------------- 149

Query: 180 ASQPQRSPEADEIFRQMKKTGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVI 239
                   ++DEIF++MK+ GLIPNAVAMLDGLCKDGL+QEAMKLFGL+R+KGTIPEVVI
Sbjct: 150 --------DSDEIFKKMKEGGLIPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVI 209

Query: 240 YTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLYKCKKIEDAVAFCIEML 299
           YTAVV+ FCKA K+++A RIFRKMQNNGI+PNAFS+GVL+QGLY C  ++DAVAFC EML
Sbjct: 210 YTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEML 269

Query: 300 ESGHTPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINENSLREFLNKRTPFSPHI 359
           ESGH+PN+ TFV L+D LC  KGV++A S ++TL QKGF +N  +++EF++KR PF    
Sbjct: 270 ESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMDKRAPFPSLA 290

[Close]

BLAST of CmUC02G028910 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 3.4e-23
Identity = 55/166 (33.13%), Postives = 95/166 (57.23%), Query Frame = 0


Query: 186 EADEIFRQMKKTGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVV 245
           EA+E F +M + G++P+ V    ++DG CK G I+ A K F  +  +   P+V+ YTA++
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393

Query: 246 DGFCKAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLYKCKKIEDAVAFCIEMLESGHT 305
            GFC+   + EA ++F +M   G+ P++ +F  LI G  K   ++DA      M+++G +
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453

Query: 306 PNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINENSLREFLN 349
           PN+ T+  LIDGLC E  +D A+ ++  + + G   N  +    +N
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499

[Close]

BLAST of CmUC02G028910 vs. ExPASy Swiss-Prot
Match: Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.7e-22
Identity = 45/151 (29.80%), Postives = 94/151 (62.25%), Query Frame = 0


Query: 186 EADEIFRQMKKTGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVV 245
           EA E++ +M   G+ P+ +   +++DG CK+  + EA ++F L+  KG  P++V Y+ ++
Sbjct: 333 EAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 392

Query: 246 DGFCKAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLYKCKKIEDAVAFCIEMLESGHT 305
           + +CKA+++D+ +R+FR++ + G+ PN  ++  L+ G  +  K+  A     EM+  G  
Sbjct: 393 NSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP 452

Query: 306 PNLTTFVGLIDGLCNEKGVDEAHSVVETLKQ 334
           P++ T+  L+DGLC+   +++A  + E +++
Sbjct: 453 PSVVTYGILLDGLCDNGELNKALEIFEKMQK 483

[Close]

BLAST of CmUC02G028910 vs. ExPASy Swiss-Prot
Match: Q9FNL2 (Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana OX=3702 GN=At5g46100 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.7e-22
Identity = 54/150 (36.00%), Postives = 88/150 (58.67%), Query Frame = 0


Query: 189 EIFRQMKKTGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGF 248
           +IF +M K G  P++     ++ GLC+ G I EA KLF  + EK   P VV YT++++G 
Sbjct: 178 KIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGL 237

Query: 249 CKAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLYKCKKIEDAVAFCIEMLESGHTPNL 308
           C ++ +DEA+R   +M++ GI PN F++  L+ GL K  +   A+     M+  G  PN+
Sbjct: 238 CGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNM 297

Query: 309 TTFVGLIDGLCNEKGVDEAHSVVETLKQKG 336
            T+  LI GLC E+ + EA  +++ +  +G
Sbjct: 298 VTYTTLITGLCKEQKIQEAVELLDRMNLQG 327

[Close]

BLAST of CmUC02G028910 vs. ExPASy Swiss-Prot
Match: Q9LPX2 (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 3.8e-22
Identity = 54/152 (35.53%), Postives = 84/152 (55.26%), Query Frame = 0


Query: 187 ADEIFRQMKKTGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVD 246
           A E+ R+M++  +  +AV    ++DGLCKDG +  A  LF  +  KG   +++ Y  ++ 
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306

Query: 247 GFCKAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLYKCKKIEDAVAFCIEMLESGHTP 306
           GFC A + D+  ++ R M    ISPN  +F VLI    K  K+ +A     EM++ G  P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366

Query: 307 NLTTFVGLIDGLCNEKGVDEAHSVVETLKQKG 336
           N  T+  LIDG C E  ++EA  +V+ +  KG
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398

[Close]

BLAST of CmUC02G028910 vs. ExPASy TrEMBL
Match: A0A6J1I1Q2 (pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita maxima OX=3661 GN=LOC111468227 PE=4 SV=1)

HSP 1 Score: 521.5 bits (1342), Expect = 4.0e-144
Identity = 281/379 (74.14%), Postives = 300/379 (79.16%), Query Frame = 0


Query: 1   MGAL--QFQSRLRVSKIFSSTIWKWEREFPLLRDPLRMSDFSLSPAQSRCFSSNSMDDDW 60
           MGAL  Q QSRLRVSKI  STI  WER FPLL DPLR  D SLSP +SRCFSSNSMDDDW
Sbjct: 1   MGALQMQLQSRLRVSKILFSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  AFSKSQPRGSPPQRRSPPDHREPR-----------------RNQRFNRHSEGSPSRFADE 120
            FS+S+PR SPPQRRSPPD RE R                 RNQRFNRH EGS SRFA+E
Sbjct: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHWEGSESRFANE 120

Query: 121 GSISLQRSESFSQKDFSFLEKFKLNTDNQSSSKEKTEESSSARLSEITWKKQLQPQPSPE 180
           G +S +RSES SQKDFSFLEKFKLNTDN S+S EKTE SSSA+ SE    KQ        
Sbjct: 121 GPMSRRRSESLSQKDFSFLEKFKLNTDNLSTSTEKTEPSSSAQFSESMQGKQ-------- 180

Query: 181 ADETFGQMKKTEESSSASQPQRSPEADEIFRQMKKTGLIPNAVAMLDGLCKDGLIQEAMK 240
                            SQPQ  PEADEIFR+MK+TGLIPNAVAMLDGLCKDGLIQEAMK
Sbjct: 181 -----------------SQPQCPPEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMK 240

Query: 241 LFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLY 300
           LFGLIREKGTIPEVV+YTAVVDGFCKAE LDEAIRIFRKMQNNGISPNAFS+GVLIQGLY
Sbjct: 241 LFGLIREKGTIPEVVVYTAVVDGFCKAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLY 300

Query: 301 KCKKIEDAVAFCIEMLESGHTPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINEN 360
           KCKK+EDAV+FCIEMLESGH+PNLTTFVGLID LC EKGVDEAH+V+ETLKQKGFLINE 
Sbjct: 301 KCKKLEDAVSFCIEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEK 354

[Close]

BLAST of CmUC02G028910 vs. ExPASy TrEMBL
Match: A0A6J1GKZ0 (pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita moschata OX=3662 GN=LOC111455321 PE=4 SV=1)

HSP 1 Score: 519.2 bits (1336), Expect = 2.0e-143
Identity = 278/379 (73.35%), Postives = 301/379 (79.42%), Query Frame = 0


Query: 1   MGAL--QFQSRLRVSKIFSSTIWKWEREFPLLRDPLRMSDFSLSPAQSRCFSSNSMDDDW 60
           MGAL  Q QSRLRVSKI SSTI  WER FPLL DPLR  D SLSP +SRCFSSNSMDDDW
Sbjct: 1   MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  AFSKSQPRGSPPQRRSPPDHREPR-----------------RNQRFNRHSEGSPSRFADE 120
            FS+S+PR SPPQRRSPPD RE R                 RNQRFNRHSEGS SRFA++
Sbjct: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHSEGSSSRFAND 120

Query: 121 GSISLQRSESFSQKDFSFLEKFKLNTDNQSSSKEKTEESSSARLSEITWKKQLQPQPSPE 180
           G +S  R+ES SQKDFSFLEKFKLNTDNQS+S EK E SSSA++SE    KQ        
Sbjct: 121 GPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQ-------- 180

Query: 181 ADETFGQMKKTEESSSASQPQRSPEADEIFRQMKKTGLIPNAVAMLDGLCKDGLIQEAMK 240
                            SQPQ  PEADEIFR+MK+TGLIPNAVAMLDGLCKDGLIQEAMK
Sbjct: 181 -----------------SQPQCPPEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMK 240

Query: 241 LFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLY 300
           LFGLIREKGTIPEVV+YTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFS+G+LIQGLY
Sbjct: 241 LFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLY 300

Query: 301 KCKKIEDAVAFCIEMLESGHTPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINEN 360
           K K++EDAV+FCIEMLESGH+PNLTTFVGLID LC EKGVDEAH+V+ETLKQKGFLINE 
Sbjct: 301 KSKQLEDAVSFCIEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEK 354

[Close]

BLAST of CmUC02G028910 vs. ExPASy TrEMBL
Match: A0A0A0K6C0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G029950 PE=4 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 7.1e-141
Identity = 279/374 (74.60%), Postives = 297/374 (79.41%), Query Frame = 0


Query: 1   MGALQFQSRLRVSKIFSSTIWKWEREFPLLRDPLRMSDFSLSPAQSRCFSSNSMDDDWAF 60
           MGA Q QSRL+VSKI SSTI KWE +FPLL +PLR  DFSL PAQSR F+SNSMDDD AF
Sbjct: 1   MGAFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAF 60

Query: 61  SKSQPRGSPPQRRSPPDHREPR-------------RNQRFNRHSEGSPSRFADEGSISLQ 120
           S S+P  +PPQRR PPDHRE R             RNQRFNRHSEGS SRF +EGS S Q
Sbjct: 61  SDSEPINTPPQRRFPPDHREARRVPRGGVTASYDNRNQRFNRHSEGSSSRFTNEGSTSPQ 120

Query: 121 RSESFSQKDFSFLEKFKLNTDNQSSSKEKTEE-SSSARLSEITWKKQLQPQPSPEADETF 180
           RSES SQKDFSFLEKFKLNTDNQSS KEKTEE SSSA +SE   +KQ             
Sbjct: 121 RSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQ------------- 180

Query: 181 GQMKKTEESSSASQPQRSPEADEIFRQMKKTGLIPNAVAMLDGLCKDGLIQEAMKLFGLI 240
                       S+PQR PEADEIF +MK+TGLIPNAVAMLDGLCKDGLIQEAMKLFGLI
Sbjct: 181 -----------QSEPQRPPEADEIFGKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLI 240

Query: 241 REKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLYKCKKI 300
           REKGTIPEVVIYTAVVDGFCKAEK DEAIRIFRKMQ+NGI PNAFSFGVLIQGLYKCKK+
Sbjct: 241 REKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQHNGIPPNAFSFGVLIQGLYKCKKL 300

Query: 301 EDAVAFCIEMLESGHTPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINENSLREF 360
           +DAVAFC EMLESGH PNLTTFVGLID LCNEKGVDEAHSVVET KQKGFLI+E +LRE 
Sbjct: 301 DDAVAFCNEMLESGHLPNLTTFVGLIDALCNEKGVDEAHSVVETFKQKGFLIDEKALREV 350

[Close]

BLAST of CmUC02G028910 vs. ExPASy TrEMBL
Match: A0A1S3CFW0 (pentatricopeptide repeat-containing protein At4g38150 OS=Cucumis melo OX=3656 GN=LOC103500481 PE=4 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 1.3e-139
Identity = 277/374 (74.06%), Postives = 297/374 (79.41%), Query Frame = 0


Query: 1   MGALQFQSRLRVSKIFSSTIWKWEREFPLLRDPLRMSDFSLSPAQSRCFSSNSMDDDWAF 60
           M A QFQSRL+VSKI SS+I KWE +FPLL +PLR  DFSLSPA SR FSSNSMDDD AF
Sbjct: 1   MAAFQFQSRLQVSKILSSSIRKWEIDFPLLHNPLRTPDFSLSPAPSRRFSSNSMDDDRAF 60

Query: 61  SKSQPRGSPPQRRSPPDHREPR-------------RNQRFNRHSEGSPSRFADEGSISLQ 120
           S+S+PR +PPQRR PPDHRE R             RNQRFNRHSEGS SRF +EGS S Q
Sbjct: 61  SESEPRNTPPQRRFPPDHREARRVPRGGVTDSYDNRNQRFNRHSEGSSSRFTNEGSTSRQ 120

Query: 121 RSESFSQKDFSFLEKFKLNTDNQSSSKEKTEE-SSSARLSEITWKKQLQPQPSPEADETF 180
           RSES SQKDFSFLEKFKLNTDNQSS  EKTEE SSSA +SE   +KQ             
Sbjct: 121 RSESLSQKDFSFLEKFKLNTDNQSSGNEKTEENSSSAPVSESMQEKQ------------- 180

Query: 181 GQMKKTEESSSASQPQRSPEADEIFRQMKKTGLIPNAVAMLDGLCKDGLIQEAMKLFGLI 240
                       SQ QR P ADEIFR+MK++GLIPNAVAMLDGLCKDGLIQEAMKLF LI
Sbjct: 181 -----------QSQHQRPPAADEIFRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALI 240

Query: 241 REKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLYKCKKI 300
           REKGTIPEVVIYTAVVDGFCKAEK DEAIRIFRKMQN GISPNAFSFGVLIQGLYKCKK+
Sbjct: 241 REKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQNKGISPNAFSFGVLIQGLYKCKKL 300

Query: 301 EDAVAFCIEMLESGHTPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINENSLREF 360
           +DAVAFC EMLESGH PNLTTFVGLID LC+EKGVDEAH+VVET KQKGFLI+E +LREF
Sbjct: 301 DDAVAFCNEMLESGHLPNLTTFVGLIDVLCSEKGVDEAHNVVETFKQKGFLIDEKALREF 350

[Close]

BLAST of CmUC02G028910 vs. ExPASy TrEMBL
Match: A0A5D3D5J5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold945G00030 PE=4 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 1.3e-139
Identity = 277/374 (74.06%), Postives = 297/374 (79.41%), Query Frame = 0


Query: 1   MGALQFQSRLRVSKIFSSTIWKWEREFPLLRDPLRMSDFSLSPAQSRCFSSNSMDDDWAF 60
           M A QFQSRL+VSKI SS+I KWE +FPLL +PLR  DFSLSPA SR FSSNSMDDD AF
Sbjct: 1   MAAFQFQSRLQVSKILSSSIRKWEIDFPLLHNPLRTPDFSLSPAPSRRFSSNSMDDDRAF 60

Query: 61  SKSQPRGSPPQRRSPPDHREPR-------------RNQRFNRHSEGSPSRFADEGSISLQ 120
           S+S+PR +PPQRR PPDHRE R             RNQRFNRHSEGS SRF +EGS S Q
Sbjct: 61  SESEPRNTPPQRRFPPDHREARRVPRGGVTDSYDNRNQRFNRHSEGSSSRFTNEGSTSRQ 120

Query: 121 RSESFSQKDFSFLEKFKLNTDNQSSSKEKTEE-SSSARLSEITWKKQLQPQPSPEADETF 180
           RSES SQKDFSFLEKFKLNTDNQSS  EKTEE SSSA +SE   +KQ             
Sbjct: 121 RSESLSQKDFSFLEKFKLNTDNQSSGNEKTEENSSSAPVSESMQEKQ------------- 180

Query: 181 GQMKKTEESSSASQPQRSPEADEIFRQMKKTGLIPNAVAMLDGLCKDGLIQEAMKLFGLI 240
                       SQ QR P ADEIFR+MK++GLIPNAVAMLDGLCKDGLIQEAMKLF LI
Sbjct: 181 -----------QSQHQRPPAADEIFRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALI 240

Query: 241 REKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLYKCKKI 300
           REKGTIPEVVIYTAVVDGFCKAEK DEAIRIFRKMQN GISPNAFSFGVLIQGLYKCKK+
Sbjct: 241 REKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQNKGISPNAFSFGVLIQGLYKCKKL 300

Query: 301 EDAVAFCIEMLESGHTPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINENSLREF 360
           +DAVAFC EMLESGH PNLTTFVGLID LC+EKGVDEAH+VVET KQKGFLI+E +LREF
Sbjct: 301 DDAVAFCNEMLESGHLPNLTTFVGLIDVLCSEKGVDEAHNVVETFKQKGFLIDEKALREF 350

[Close]

BLAST of CmUC02G028910 vs. TAIR 10
Match: AT4G38150.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 261.9 bits (668), Expect = 1.1e-69
Identity = 146/302 (48.34%), Postives = 194/302 (64.24%), Query Frame = 0


Query: 60  FSKSQPRGSPPQRRSPPD--HREPRRNQRFNRHSEGSPSRFADEGSISLQRSESFSQKDF 119
           F  +   G   ++++PP+     P R +R +      P+R A     +L +S++ +  D 
Sbjct: 30  FLSTGDNGQVDEQQNPPEPLPNRPLRGERSSNSHREPPARQAH----NLGKSDT-TLSDD 89

Query: 120 SFLEKFKLNTDNQSSSKEKTEESSSARLSEITWKKQLQPQPSPEADETFGQMKKTEESSS 179
            FLE+FKL  +  S    K E+               +P P PE                
Sbjct: 90  GFLEQFKLGVNQDSRETPKPEQYPQ------------EPLPPPE---------------- 149

Query: 180 ASQPQRSPEADEIFRQMKKTGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVI 239
                   ++DEIF++MK+ GLIPNAVAMLDGLCKDGL+QEAMKLFGL+R+KGTIPEVVI
Sbjct: 150 --------DSDEIFKKMKEGGLIPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVI 209

Query: 240 YTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLYKCKKIEDAVAFCIEML 299
           YTAVV+ FCKA K+++A RIFRKMQNNGI+PNAFS+GVL+QGLY C  ++DAVAFC EML
Sbjct: 210 YTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEML 269

Query: 300 ESGHTPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINENSLREFLNKRTPFSPHI 359
           ESGH+PN+ TFV L+D LC  KGV++A S ++TL QKGF +N  +++EF++KR PF    
Sbjct: 270 ESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMDKRAPFPSLA 290

[Close]

BLAST of CmUC02G028910 vs. TAIR 10
Match: AT4G38150.2 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 261.9 bits (668), Expect = 1.1e-69
Identity = 146/302 (48.34%), Postives = 194/302 (64.24%), Query Frame = 0


Query: 60  FSKSQPRGSPPQRRSPPD--HREPRRNQRFNRHSEGSPSRFADEGSISLQRSESFSQKDF 119
           F  +   G   ++++PP+     P R +R +      P+R A     +L +S++ +  D 
Sbjct: 30  FLSTGDNGQVDEQQNPPEPLPNRPLRGERSSNSHREPPARQAH----NLGKSDT-TLSDD 89

Query: 120 SFLEKFKLNTDNQSSSKEKTEESSSARLSEITWKKQLQPQPSPEADETFGQMKKTEESSS 179
            FLE+FKL  +  S    K E+               +P P PE                
Sbjct: 90  GFLEQFKLGVNQDSRETPKPEQYPQ------------EPLPPPE---------------- 149

Query: 180 ASQPQRSPEADEIFRQMKKTGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVI 239
                   ++DEIF++MK+ GLIPNAVAMLDGLCKDGL+QEAMKLFGL+R+KGTIPEVVI
Sbjct: 150 --------DSDEIFKKMKEGGLIPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVI 209

Query: 240 YTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLYKCKKIEDAVAFCIEML 299
           YTAVV+ FCKA K+++A RIFRKMQNNGI+PNAFS+GVL+QGLY C  ++DAVAFC EML
Sbjct: 210 YTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEML 269

Query: 300 ESGHTPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINENSLREFLNKRTPFSPHI 359
           ESGH+PN+ TFV L+D LC  KGV++A S ++TL QKGF +N  +++EF++KR PF    
Sbjct: 270 ESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMDKRAPFPSLA 290

[Close]

BLAST of CmUC02G028910 vs. TAIR 10
Match: AT5G03560.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 117.1 bits (292), Expect = 4.4e-26
Identity = 86/278 (30.94%), Postives = 147/278 (52.88%), Query Frame = 0


Query: 72  RRSPPDHREPRRNQRFNRHSEGSPSRFADEGSISLQRSESFSQKDFSFLEKFKLNTD-NQ 131
           R+ PP+ R  R   R  R+S      F   G +  ++  S         E  ++NT  N 
Sbjct: 89  RKLPPELRGRRDFVRSKRNSNSLFPWFC--GGVFARQFSS---------ETKRVNTKVNF 148

Query: 132 SSSKEKTEESSSARLSEITWKKQLQPQPSPEADETFGQMKKTEESSSASQPQRSPEADEI 191
           S S + ++E +  +++E + KKQ   +P P   + F +    EE      P+      EI
Sbjct: 149 SLSDDDSDEETETQVTEDS-KKQ---EPPPPPYDPFSKKPAIEE------PEDPKNLQEI 208

Query: 192 FRQMKKTGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK 251
           F +M+  G    AV M D L KDG   EA++LF  I++K  +P+VV +TA+V+ +  A +
Sbjct: 209 FHKMRTEGFTNEAVKMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQ 268

Query: 252 LDEAIRIFRKMQNNGISPNAFSFGVLIQGLYKCKKI-EDAVAFCIEMLESGHTPNLTTFV 311
             E +++F +M  +G+SPNA+++ VLI+GL    K  +DA  + +EM+ +G +PN  T+ 
Sbjct: 269 AKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYT 328

Query: 312 GLIDGLCNEKGVDEAHSVVETLKQKGFLINENSLREFL 348
            + +    E   + A  +++ +K KGF+ +E ++RE L
Sbjct: 329 AVFEAFVREGKEESARELLQEMKGKGFVPDEKAVREAL 345

[Close]

BLAST of CmUC02G028910 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 111.3 bits (277), Expect = 2.4e-24
Identity = 55/166 (33.13%), Postives = 95/166 (57.23%), Query Frame = 0


Query: 186 EADEIFRQMKKTGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVV 245
           EA+E F +M + G++P+ V    ++DG CK G I+ A K F  +  +   P+V+ YTA++
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393

Query: 246 DGFCKAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLYKCKKIEDAVAFCIEMLESGHT 305
            GFC+   + EA ++F +M   G+ P++ +F  LI G  K   ++DA      M+++G +
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453

Query: 306 PNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINENSLREFLN 349
           PN+ T+  LIDGLC E  +D A+ ++  + + G   N  +    +N
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499

[Close]

BLAST of CmUC02G028910 vs. TAIR 10
Match: AT1G05670.2 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 111.3 bits (277), Expect = 2.4e-24
Identity = 55/166 (33.13%), Postives = 95/166 (57.23%), Query Frame = 0


Query: 186 EADEIFRQMKKTGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVV 245
           EA+E F +M + G++P+ V    ++DG CK G I+ A K F  +  +   P+V+ YTA++
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393

Query: 246 DGFCKAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLYKCKKIEDAVAFCIEMLESGHT 305
            GFC+   + EA ++F +M   G+ P++ +F  LI G  K   ++DA      M+++G +
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453

Query: 306 PNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINENSLREFLN 349
           PN+ T+  LIDGLC E  +D A+ ++  + + G   N  +    +N
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499

The following BLAST results are available for this feature:

BLAST of CmUC02G028910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888880.1	2.3e-149	77.66	pentatricopeptide repeat-containing protein At4g38150 isoform X1 [Benincasa hisp...	[more]
XP_022969144.1	8.3e-144	74.14	pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima] >X...	[more]
XP_022952706.1	4.1e-143	73.35	pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita moschata] ...	[more]
KAG7011839.1	5.4e-143	73.61	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_023554525.1	9.2e-143	73.35	pentatricopeptide repeat-containing protein At4g38150-like isoform X1 [Cucurbita...	[more]

BLAST of CmUC02G028910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZL5	1.6e-68	48.34	Pentatricopeptide repeat-containing protein At4g38150 OS=Arabidopsis thaliana OX...	[more]
Q0WVK7	3.4e-23	33.13	Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop...	[more]
Q6NQ83	1.7e-22	29.80	Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop...	[more]
Q9FNL2	1.7e-22	36.00	Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana OX...	[more]
Q9LPX2	3.8e-22	35.53	Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop...	[more]

BLAST of CmUC02G028910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I1Q2	4.0e-144	74.14	pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita maxima O...	[more]
A0A6J1GKZ0	2.0e-143	73.35	pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita moschata...	[more]
A0A0A0K6C0	7.1e-141	74.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G029950 PE=4 SV=1	[more]
A0A1S3CFW0	1.3e-139	74.06	pentatricopeptide repeat-containing protein At4g38150 OS=Cucumis melo OX=3656 GN...	[more]
A0A5D3D5J5	1.3e-139	74.06	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of CmUC02G028910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38150.1	1.1e-69	48.34	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G38150.2	1.1e-69	48.34	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G03560.2	4.4e-26	30.94	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G05670.1	2.4e-24	33.13	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G05670.2	2.4e-24	33.13	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 487..529 e-value: 2.6E-5 score: 33.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 487..530 e-value: 5.2E-11 score: 42.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 487..530 score: 13.226928
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 233..282 e-value: 4.0E-15 score: 55.7
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 205..233 e-value: 1.3E-4 score: 19.9 coord: 272..304 e-value: 8.5E-4 score: 17.3 coord: 236..270 e-value: 3.4E-10 score: 37.5
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 307..336 e-value: 0.17 score: 12.2 coord: 205..230 e-value: 9.5E-5 score: 22.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 304..338 score: 9.065053
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 199..233 score: 8.582755
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 234..268 score: 13.076888
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 269..303 score: 10.117337
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 458..534 e-value: 1.6E-16 score: 61.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 204..262 e-value: 1.1E-14 score: 56.4 coord: 263..336 e-value: 3.9E-14 score: 54.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..186
None	No IPR available	PANTHER	PTHR45613	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 76..172 coord: 175..360
None	No IPR available	PANTHER	PTHR45613:SF39	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 175..360
None	No IPR available	PANTHER	PTHR45613:SF39	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 76..172
None	No IPR available	CDD	cd16448	RING-H2	coord: 487..530 e-value: 2.84475E-15 score: 67.8623
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 482..535

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC02G028910.1	CmUC02G028910.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding