CmUC02G028360 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC02G028360
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Exopolygalacturonase-like
Location	CmU531Chr02: 2404108 .. 2405593 (-)
RNA-Seq Expression	CmUC02G028360
Synteny	CmUC02G028360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATTACTTATATTACCTTTGTTGTTATGGTTGGCATCAACTAGTAAAGGTCAATCTGTTTTTGACGTTACTACATATGGTGCCAAACCTAATACTGATATTACTCAGGTAAGTATATACTAACTTGATAAAAAATTTATTTTATAAAAAAGACTTTTATCTAATGAAATAATTCAATTTACAGGCGTTGGCAAATGCATGGAAGGATGCATGTGCGTCAACTATTCCCAGTAAATTATTGATTCCAGAAGGAGTTTACCAATTAAACCAATCCAACCTCAATGGTCATTGCAAGAGTTCTATTGAGGTTCAGGTCGAAGGGACATTACAAGCTCCTCTCGATCCAATAGGAGATGGACTGGTTCTTTTTCAATATATTGATCAATTAACGTTGTCAGGCTTTGGTGTTTTTGATGGCCAAGGAAAAACAAGTTGGGGAAAAAATGATTGTCACTTAAAAAAAATATGCACCAAACTTCCCATGGTAAATTCTCAAACTATATTAGCCTCTCCTTTTTGTCTCATAAGATATATAACTTTTAAGTAATATATGTGTTTTTTTTAACTTGGTGACTTTTTTTTGGGGGGTGGGGGTGGGGTTAAAATTGGTCAGAATTTGAGGTTCAGTTTCGTCACCAATTCAATAGTAAAGGATATAACATCCTTGAATAGTAAGAGTTTTCATATCAATCTTTTGGGCTGCAAGAATGTGACTTTTCAAAATGTGACAATTATTGCACCCGAGAATAGCCCCAACACCGATGGAATTCACGTGAGTAGTTCAGAAGAGATTAAAATTCTCAATACACAAATCTCAACAGGGGATGATTGTGTGTCTGTGGGAGATAGTAACAAGCAAATAACTATTACCAACGTAACTTGCGGACCAGGACATGGCATTAGTGTAGGAAGTTTAGGGAAGTACACCAAGGAAAAAGAGGTGGCAGGAGTCATGGTGAATAAATGTAAATTAATCAATACTTCGAATGGTGTTAGGATCAAAACATGGCCAGATTCTGCAGGTGTATACCCAGCCACTGACTTGCATTTTGAAGATATTGAAATGGTTAATGTCAGCAATCCTATCATAATAGACCAAGAATATTGTCCATCCAATCACTGCAACAAGAACGTATGTATTAACTTCAAAGTAATATTTTTGTTATGAAAAAAAAAAAAGAGTAATGTTACATGACTAATGTTTTCTTATGTTCAGATTCCATCAAAAATTAAGATCAGCAATGTGAGTTTCAAGAATATCAGAGGCACTTGTGTTACTCCCGTGGCAATTAAGTTTGTTTGTAGCAAAGATGTAGCATGCGAAGGTGTGAAAGTTACTGATATTGACCTAACTTACATCGGAAGCCGAGGACCAATTACGTCTCAATGTGCAAATGTTCTAAATCCCATCATTACTGGAAAACAAAACCCTCGTGCATGTGCTGAAGCTGCTCCTATTAATGCTCCTCCATCAACCGACTAA

mRNA sequence

ATGGCATTACTTATATTACCTTTGTTGTTATGGTTGGCATCAACTAGTAAAGGTCAATCTGTTTTTGACGTTACTACATATGGTGCCAAACCTAATACTGATATTACTCAGGCGTTGGCAAATGCATGGAAGGATGCATGTGCGTCAACTATTCCCAGTAAATTATTGATTCCAGAAGGAGTTTACCAATTAAACCAATCCAACCTCAATGGTCATTGCAAGAGTTCTATTGAGGTTCAGGTCGAAGGGACATTACAAGCTCCTCTCGATCCAATAGGAGATGGACTGAATTTGAGGTTCAGTTTCGTCACCAATTCAATAGTAAAGGATATAACATCCTTGAATAGTAAGAGTTTTCATATCAATCTTTTGGGCTGCAAGAATGTGACTTTTCAAAATGTGACAATTATTGCACCCGAGAATAGCCCCAACACCGATGGAATTCACGTGAGTAGTTCAGAAGAGATTAAAATTCTCAATACACAAATCTCAACAGGGGATGATTGTGTGTCTGTGGGAGATAGTAACAAGCAAATAACTATTACCAACGTAACTTGCGGACCAGGACATGGCATTAGTGTAGGAAGTTTAGGGAAGTACACCAAGGAAAAAGAGGTGGCAGGAGTCATGGTGAATAAATGTAAATTAATCAATACTTCGAATGGTGTTAGGATCAAAACATGGCCAGATTCTGCAGGTGTATACCCAGCCACTGACTTGCATTTTGAAGATATTGAAATGGTTAATGTCAGCAATCCTATCATAATAGACCAAGAATATTGTCCATCCAATCACTGCAACAAGAACATTCCATCAAAAATTAAGATCAGCAATGTGAGTTTCAAGAATATCAGAGGCACTTGTGTTACTCCCGTGGCAATTAAGTTTGTTTGTAGCAAAGATGTAGCATGCGAAGGTGTGAAAGTTACTGATATTGACCTAACTTACATCGGAAGCCGAGGACCAATTACGTCTCAATGTGCAAATGTTCTAAATCCCATCATTACTGGAAAACAAAACCCTCGTGCATGTGCTGAAGCTGCTCCTATTAATGCTCCTCCATCAACCGACTAA

Coding sequence (CDS)

ATGGCATTACTTATATTACCTTTGTTGTTATGGTTGGCATCAACTAGTAAAGGTCAATCTGTTTTTGACGTTACTACATATGGTGCCAAACCTAATACTGATATTACTCAGGCGTTGGCAAATGCATGGAAGGATGCATGTGCGTCAACTATTCCCAGTAAATTATTGATTCCAGAAGGAGTTTACCAATTAAACCAATCCAACCTCAATGGTCATTGCAAGAGTTCTATTGAGGTTCAGGTCGAAGGGACATTACAAGCTCCTCTCGATCCAATAGGAGATGGACTGAATTTGAGGTTCAGTTTCGTCACCAATTCAATAGTAAAGGATATAACATCCTTGAATAGTAAGAGTTTTCATATCAATCTTTTGGGCTGCAAGAATGTGACTTTTCAAAATGTGACAATTATTGCACCCGAGAATAGCCCCAACACCGATGGAATTCACGTGAGTAGTTCAGAAGAGATTAAAATTCTCAATACACAAATCTCAACAGGGGATGATTGTGTGTCTGTGGGAGATAGTAACAAGCAAATAACTATTACCAACGTAACTTGCGGACCAGGACATGGCATTAGTGTAGGAAGTTTAGGGAAGTACACCAAGGAAAAAGAGGTGGCAGGAGTCATGGTGAATAAATGTAAATTAATCAATACTTCGAATGGTGTTAGGATCAAAACATGGCCAGATTCTGCAGGTGTATACCCAGCCACTGACTTGCATTTTGAAGATATTGAAATGGTTAATGTCAGCAATCCTATCATAATAGACCAAGAATATTGTCCATCCAATCACTGCAACAAGAACATTCCATCAAAAATTAAGATCAGCAATGTGAGTTTCAAGAATATCAGAGGCACTTGTGTTACTCCCGTGGCAATTAAGTTTGTTTGTAGCAAAGATGTAGCATGCGAAGGTGTGAAAGTTACTGATATTGACCTAACTTACATCGGAAGCCGAGGACCAATTACGTCTCAATGTGCAAATGTTCTAAATCCCATCATTACTGGAAAACAAAACCCTCGTGCATGTGCTGAAGCTGCTCCTATTAATGCTCCTCCATCAACCGACTAA

Protein sequence

MALLILPLLLWLASTSKGQSVFDVTTYGAKPNTDITQALANAWKDACASTIPSKLLIPEGVYQLNQSNLNGHCKSSIEVQVEGTLQAPLDPIGDGLNLRFSFVTNSIVKDITSLNSKSFHINLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVTCGPGHGISVGSLGKYTKEKEVAGVMVNKCKLINTSNGVRIKTWPDSAGVYPATDLHFEDIEMVNVSNPIIIDQEYCPSNHCNKNIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACEGVKVTDIDLTYIGSRGPITSQCANVLNPIITGKQNPRACAEAAPINAPPSTD

Homology

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BLAST of CmUC02G028360 vs. NCBI nr
Match: XP_031744868.1 (exopolygalacturonase [Cucumis sativus])

HSP 1 Score: 563.5 bits (1451), Expect = 1.3e-156
Identity = 291/395 (73.67%), Postives = 319/395 (80.76%), Query Frame = 0


Query: 4   LILPLLLWLASTSKGQSVFDVTTYGAKPNTDITQALANAWKDACASTIPSKLLIPEGVYQ 63
           L+L LLL LAST+KGQS+FD+TTYGAKPNTDITQALANAWKDACAST  SKLLIP GVY 
Sbjct: 20  LLLHLLLMLASTAKGQSIFDITTYGAKPNTDITQALANAWKDACASTYSSKLLIPMGVYH 79

Query: 64  LNQSNLNGHCKSSIEVQVEGTLQAPLDPIGDGL--------------------------- 123
           LNQS L+G CKS+IEV++EGTLQA  DPIGDGL                           
Sbjct: 80  LNQSILHGPCKSTIEVRMEGTLQAHPDPIGDGLVLFQYIDQLTLSGTGAFDGQGEKGWEK 139

Query: 124 --------------NLRFSFVTNSIVKDITSLNSKSFHINLLGCKNVTFQNVTIIAPENS 183
                         N++FSFVTNS+VKDITSL+SK+FH NLLGCKNVTFQNVTIIAPENS
Sbjct: 140 NDCHLKKICTKLPMNVKFSFVTNSMVKDITSLDSKNFHFNLLGCKNVTFQNVTIIAPENS 199

Query: 184 PNTDGIHVSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVTCGPGHGISVGSLGKYTK 243
           PNTDGIHVSSSE I I NT+ISTGDDC+SVGDSNKQITITNVTCGPGHGIS+GSLGKYTK
Sbjct: 200 PNTDGIHVSSSEVINIFNTRISTGDDCISVGDSNKQITITNVTCGPGHGISIGSLGKYTK 259

Query: 244 EKEVAGVMVNKCKLINTSNGVRIKTWPDSAGVYPATDLHFEDIEMVNVSNPIIIDQEYCP 303
           EKEVAGV V  CKLINTSNGVRIKTWPD A  Y A+DLHFEDIEMVNVSNP+IIDQEYCP
Sbjct: 260 EKEVAGVTVKSCKLINTSNGVRIKTWPDCAVAYTASDLHFEDIEMVNVSNPVIIDQEYCP 319

Query: 304 SNHCNKNIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACEGVKVTDIDLTYIGSRGP 358
           SN CNK IPSKIKI+NVSFKNIRGT  T VA+KF+CS   +CEGV+VTDIDL YIG++G 
Sbjct: 320 SNQCNKKIPSKIKINNVSFKNIRGTSATFVAVKFICSTVFSCEGVEVTDIDLAYIGTQGR 379

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BLAST of CmUC02G028360 vs. NCBI nr
Match: KAA0059139.1 (exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK21608.1 exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 549.7 bits (1415), Expect = 1.9e-152
Identity = 286/395 (72.41%), Postives = 314/395 (79.49%), Query Frame = 0


Query: 4   LILPLLLWLASTSKGQSVFDVTTYGAKPNTDITQALANAWKDACASTIPSKLLIPEGVYQ 63
           L+L +LL LAST+K QS+FD+TTYGAKPNTDITQ LANAWKDACAST PS+LLIP GVYQ
Sbjct: 10  LLLHVLLMLASTAKCQSIFDITTYGAKPNTDITQVLANAWKDACASTNPSQLLIPTGVYQ 69

Query: 64  LNQSNLNGHCKSSIEVQVEGTLQAPLDPIGDGL--------------------------- 123
           LNQS L G C S+IEV++EGTLQA  DPIG GL                           
Sbjct: 70  LNQSLLIGPCNSTIEVRMEGTLQAHPDPIGIGLVLFRHIDQLTISGTGAFDGQGEKGWEK 129

Query: 124 --------------NLRFSFVTNSIVKDITSLNSKSFHINLLGCKNVTFQNVTIIAPENS 183
                         N+RF+F+TNSIVKDITSL+SK+FHINLL CKNVTFQNVTIIAPE S
Sbjct: 130 NDCHLKKACTRLPMNVRFNFITNSIVKDITSLDSKNFHINLLSCKNVTFQNVTIIAPEKS 189

Query: 184 PNTDGIHVSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVTCGPGHGISVGSLGKYTK 243
           PNTDGIHVS+SEEI ILNT+ISTGDDCVSVGD NKQITITNVTCGPGHGIS+GSLGKYT 
Sbjct: 190 PNTDGIHVSNSEEINILNTKISTGDDCVSVGDGNKQITITNVTCGPGHGISIGSLGKYTT 249

Query: 244 EKEVAGVMVNKCKLINTSNGVRIKTWPDSAGVYPATDLHFEDIEMVNVSNPIIIDQEYCP 303
           EKEVAGV V  C LINTSNGVRIK+WPDSA  Y A+DLHFEDIEMVNVSNPIIIDQEYCP
Sbjct: 250 EKEVAGVTVKSCNLINTSNGVRIKSWPDSAVAYTASDLHFEDIEMVNVSNPIIIDQEYCP 309

Query: 304 SNHCNKNIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACEGVKVTDIDLTYIGSRGP 358
           SN CNK IPSKIKI NVSFKNIRGT  TPVAIKF+CSKD+ CE V+V DI+L+Y G++G 
Sbjct: 310 SNQCNKKIPSKIKIRNVSFKNIRGTSATPVAIKFICSKDLPCEDVEVADINLSYTGTQGR 369

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BLAST of CmUC02G028360 vs. NCBI nr
Match: XP_008455507.2 (PREDICTED: exopolygalacturonase-like [Cucumis melo])

HSP 1 Score: 545.4 bits (1404), Expect = 3.6e-151
Identity = 285/395 (72.15%), Postives = 313/395 (79.24%), Query Frame = 0


Query: 4   LILPLLLWLASTSKGQSVFDVTTYGAKPNTDITQALANAWKDACASTIPSKLLIPEGVYQ 63
           L+L LLL LAST+K QS+FD+TTYGAKPNTDITQ LANAWKDACAST PS+LLIP GVYQ
Sbjct: 131 LLLHLLLMLASTAKCQSIFDITTYGAKPNTDITQVLANAWKDACASTNPSQLLIPTGVYQ 190

Query: 64  LNQSNLNGHCKSSIEVQVEGTLQAPLDPIGDGL--------------------------- 123
           LNQS L G C S+IEV++EGTLQA  DPIG GL                           
Sbjct: 191 LNQSLLIGPCNSTIEVRMEGTLQAHPDPIGIGLVLFRHIDQLTISGTGAFDGQGEKGWEK 250

Query: 124 --------------NLRFSFVTNSIVKDITSLNSKSFHINLLGCKNVTFQNVTIIAPENS 183
                         N+RF+F+TNSIVKDITSL+SK+FHINLL CKNVTFQNVTIIAPE S
Sbjct: 251 NDCHLKKACTRLPMNVRFNFITNSIVKDITSLDSKNFHINLLSCKNVTFQNVTIIAPEKS 310

Query: 184 PNTDGIHVSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVTCGPGHGISVGSLGKYTK 243
           PNTDGIHVS+SEEI ILNT+ISTGDDCVSVGD NKQITITNVTCGPGHGIS+GSLGKYT 
Sbjct: 311 PNTDGIHVSNSEEINILNTKISTGDDCVSVGDGNKQITITNVTCGPGHGISIGSLGKYTT 370

Query: 244 EKEVAGVMVNKCKLINTSNGVRIKTWPDSAGVYPATDLHFEDIEMVNVSNPIIIDQEYCP 303
           EKEVAGV V  C LINTSNGVRIK+WPDSA  Y A+DLHFEDIEMVNVSNPIIIDQEYCP
Sbjct: 371 EKEVAGVTVKSCNLINTSNGVRIKSWPDSAVAYTASDLHFEDIEMVNVSNPIIIDQEYCP 430

Query: 304 SNHCNKNIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACEGVKVTDIDLTYIGSRGP 358
           SN CNK IPSKIKI NVSFKNIRGT  T VAIKF+CSKD+ C+ V+V DI+L+Y G++G 
Sbjct: 431 SNQCNKKIPSKIKIRNVSFKNIRGTSATFVAIKFICSKDLPCDDVEVADINLSYTGTQGR 490

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BLAST of CmUC02G028360 vs. NCBI nr
Match: XP_031744817.1 (exopolygalacturonase-like [Cucumis sativus] >KAE8645715.1 hypothetical protein Csa_020330 [Cucumis sativus])

HSP 1 Score: 533.5 bits (1373), Expect = 1.4e-147
Identity = 274/399 (68.67%), Postives = 312/399 (78.20%), Query Frame = 0


Query: 1   MALLILPLLLWLASTSKGQSVFDVTTYGAKPNTDITQALANAWKDACASTIPSKLLIPEG 60
           M L +LP  L LAST + QS+FDVT YGAKPNTDITQALANAWK+AC ST PSKLLIP+G
Sbjct: 1   MGLALLPFFLLLASTIEAQSLFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKG 60

Query: 61  VYQLNQSNLNGHCKS-SIEVQVEGTLQAPLDPIGDGL----------------------- 120
           VYQL+QS L G CKS  I+VQV+GTL+APL P GDGL                       
Sbjct: 61  VYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPNGDGLVLFAYIDQLMLSGTGVFDGQGKA 120

Query: 121 ------------------NLRFSFVTNSIVKDITSLNSKSFHINLLGCKNVTFQNVTIIA 180
                             NL+FSF+TNSIVKDITSL+SK+FHINLLGCKNVTFQ+VTI A
Sbjct: 121 GWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISA 180

Query: 181 PENSPNTDGIHVSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVTCGPGHGISVGSLG 240
           PENSPNTDGIH+SSSE+I IL+++ISTGDDCVSVGDSNKQ+TITNVTCGPGHGISVGSLG
Sbjct: 181 PENSPNTDGIHISSSEQINILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLG 240

Query: 241 KYTKEKEVAGVMVNKCKLINTSNGVRIKTWPDSAGVYPATDLHFEDIEMVNVSNPIIIDQ 300
           KYTKEK+V GV V  CKLINT+NGVRIKTWPDSAG + A+D+HFEDIEM NVSNP+IIDQ
Sbjct: 241 KYTKEKDVVGVSVKACKLINTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQ 300

Query: 301 EYCPSNHCNKNIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACEGVKVTDIDLTYIG 358
           EYCP N CN+ +PSKIKIS VSFKNIRGT  TP+A+K VCSK + CEGV+V DI+LTY G
Sbjct: 301 EYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPIAVKLVCSKSIPCEGVEVADINLTYSG 360

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BLAST of CmUC02G028360 vs. NCBI nr
Match: XP_031744814.1 (exopolygalacturonase-like [Cucumis sativus] >XP_031744815.1 LOW QUALITY PROTEIN: exopolygalacturonase [Cucumis sativus] >XP_031744816.1 exopolygalacturonase-like [Cucumis sativus] >XP_031744818.1 exopolygalacturonase-like [Cucumis sativus] >KAE8645716.1 hypothetical protein Csa_020252 [Cucumis sativus])

HSP 1 Score: 533.5 bits (1373), Expect = 1.4e-147
Identity = 274/399 (68.67%), Postives = 312/399 (78.20%), Query Frame = 0


Query: 1   MALLILPLLLWLASTSKGQSVFDVTTYGAKPNTDITQALANAWKDACASTIPSKLLIPEG 60
           M L +LP  L LAST + QS+FDVT YGAKPNTDITQALANAWK+AC ST PSKLLIP+G
Sbjct: 1   MGLALLPFFLLLASTIEAQSLFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKG 60

Query: 61  VYQLNQSNLNGHCKS-SIEVQVEGTLQAPLDPIGDGL----------------------- 120
           VYQL+QS L G CKS  I+VQV+GTL+APL P GDGL                       
Sbjct: 61  VYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPNGDGLVLFAYIDQLMLSGTGVFDGQGKA 120

Query: 121 ------------------NLRFSFVTNSIVKDITSLNSKSFHINLLGCKNVTFQNVTIIA 180
                             NL+FSF+TNSIVKDITSL+SK+FHINLLGCKNVTFQ+VTI A
Sbjct: 121 GWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISA 180

Query: 181 PENSPNTDGIHVSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVTCGPGHGISVGSLG 240
           PENSPNTDGIH+SSSE+I IL+++ISTGDDCVSVGDSNKQ+TITNVTCGPGHGISVGSLG
Sbjct: 181 PENSPNTDGIHISSSEQINILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLG 240

Query: 241 KYTKEKEVAGVMVNKCKLINTSNGVRIKTWPDSAGVYPATDLHFEDIEMVNVSNPIIIDQ 300
           KYTKEK+V GV V  CKLINT+NGVRIKTWPDSAG + A+D+HFEDIEM NVSNP+IIDQ
Sbjct: 241 KYTKEKDVVGVTVKACKLINTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQ 300

Query: 301 EYCPSNHCNKNIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACEGVKVTDIDLTYIG 358
           EYCP N CN+ +PSKIKIS VSFKNIRGT  TP+A+K VCSK + CEGV+V DI+LTY G
Sbjct: 301 EYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPIAVKLVCSKSIPCEGVEVADINLTYSG 360

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BLAST of CmUC02G028360 vs. ExPASy Swiss-Prot
Match: Q05967 (Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 1.3e-100
Identity = 193/384 (50.26%), Postives = 247/384 (64.32%), Query Frame = 0


Query: 8   LLLWLASTSKGQS-VFDVTTYGAKPNTDITQALANAWKDACASTIPSKLLIPEGVYQLNQ 67
           +LL+LA   + Q+ VFD+T YGA  N DI++AL NA+K+AC ST PS ++IP+G + +NQ
Sbjct: 12  VLLFLAHFGESQTGVFDITKYGANSNADISEALLNAFKEACQSTSPSTIVIPKGTFTMNQ 71

Query: 68  SNLNGHCKSSIEVQVEGTLQAPLDP----IGDGL-------------------------- 127
             L G CKS +E+Q++ TL+AP DP    +G+ L                          
Sbjct: 72  VKLEGPCKSPLELQIQATLKAPSDPSQLKVGEWLTVNKLDQFTMSGGGILDGQAAAAWEC 131

Query: 128 -----------NLRFSFVTNSIVKDITSLNSKSFHINLLGCKNVTFQNVTIIAPENSPNT 187
                      NL F+ +TNS +KDIT+L+SKSFH+N+  CKN+TF    + AP NSPNT
Sbjct: 132 KQSKKCNKLPNNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNT 191

Query: 188 DGIHVSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVTCGPGHGISVGSLGKYTKEKE 247
           DGIHVS S  + I ++  STGDDC+SVGD  +Q+ IT VTCGPGHGISVGSLG    EK 
Sbjct: 192 DGIHVSRSSSVNITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVGSLGGNPDEKP 251

Query: 248 VAGVMVNKCKLINTSNGVRIKTWPDS-AGVYPATDLHFEDIEMVNVSNPIIIDQEYCPSN 307
           V GV V  C   NT NGVRIKTWP S  GV    D+HFEDI + NVSNP++IDQ YCP N
Sbjct: 252 VVGVFVRNCTFTNTDNGVRIKTWPASHPGV--VNDVHFEDIIVQNVSNPVVIDQVYCPFN 311

Query: 308 HCNKNIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACEGVKVTDIDLTYIGSRGPIT 349
            CNK++PS++KIS VSF+NI+GT  T  A+  + SK V CEG++V DID+TY G  GP  
Sbjct: 312 KCNKDLPSQVKISKVSFQNIKGTSRTQDAVSLLRSKGVPCEGIEVGDIDITYSGKEGPAK 371

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BLAST of CmUC02G028360 vs. ExPASy Swiss-Prot
Match: Q40312 (Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 2.5e-99
Identity = 189/402 (47.01%), Postives = 250/402 (62.19%), Query Frame = 0


Query: 5   ILPLLLWLASTSKGQS-VFDVTTYGAKPNTDITQALANAWKDACASTIPSKLLIPEGVYQ 64
           I+   L++A     QS V D++ +G KPN+DI QAL +AW +ACAST  +K++IP G YQ
Sbjct: 7   IIVSFLFIADFCAAQSGVLDISKFGGKPNSDIGQALTSAWNEACASTTAAKIVIPAGTYQ 66

Query: 65  LNQSNLNGHCKSSIEVQVEGTLQAPLDP------------------------IGDG---- 124
           LN   L G CK+ IE+QV+GT+QAP DP                        + DG    
Sbjct: 67  LNGIELKGPCKAPIELQVDGTIQAPADPSVIKGTEQWFKFLYMDHLTLSGKGVFDGQGAT 126

Query: 125 ---------------------LNLRFSFVTNSIVKDITSLNSKSFHINLLGCKNVTFQNV 184
                                +N  F+FV NSIV+ +TS +SK+FH+ + GCKN+TF   
Sbjct: 127 VYKKAAPASAWSGKNSNSKVFMNFGFNFVNNSIVRGVTSKDSKNFHVMVFGCKNITFDGF 186

Query: 185 TIIAPENSPNTDGIHVSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVTCGPGHGISV 244
           TI AP +SPNTDGIH+  S ++KILNT I TGDDCVS+GD +KQIT+  V CGPGHG+SV
Sbjct: 187 TITAPGDSPNTDGIHMGKSTDVKILNTNIGTGDDCVSIGDGSKQITVQGVNCGPGHGLSV 246

Query: 245 GSLGKYTKEKEVAGVMVNKCKLINTSNGVRIKTWPDSAGVYPATDLHFEDIEMVNVSNPI 304
           GSLGK+T E+ V G+ V  C L  T NGVRIKTWPD+ G    +D+HFEDI M NV NP+
Sbjct: 247 GSLGKFTTEENVEGITVKNCTLTATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPV 306

Query: 305 IIDQEYCPSNHCNKNIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACEGVKVTDIDL 357
           IIDQEY P N C+K  PSKIK+S +SFKN++GT  T   +  +CS  V C+GV++ ++DL
Sbjct: 307 IIDQEYYPWNQCSKKNPSKIKLSKISFKNVKGTSGTAEGVVLICSSAVPCDGVELNNVDL 366

[Close]

BLAST of CmUC02G028360 vs. ExPASy Swiss-Prot
Match: Q39786 (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 1.5e-96
Identity = 185/390 (47.44%), Postives = 247/390 (63.33%), Query Frame = 0


Query: 8   LLLWLASTSKGQS-VFDVTT-YGAKPN--TDITQALANAWKDACASTIPSKLLIPEGVYQ 67
           LLL   S SK QS  FDV   +GAK +  TD+++   +AWK+ACAS  PS ++IP+G Y 
Sbjct: 14  LLLLFISASKVQSDAFDVVAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVIPKGTYL 73

Query: 68  LNQSNLNGHCKSSIEVQVEGTLQAPLDP-----------------------IGDG----- 127
           L++ NL G CK+ IE+ V+GT+QAP DP                       I DG     
Sbjct: 74  LSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWVRFYSVENFKMFGGGIFDGQGSIA 133

Query: 128 ----------------LNLRFSFVTNSIVKDITSLNSKSFHINLLGCKNVTFQNVTIIAP 187
                           +N+RF F+TN++++DITS +SK FHIN+  CKN+T + + I AP
Sbjct: 134 YEKNTCENREFRSKLPVNIRFDFLTNALIQDITSKDSKLFHINVFACKNITLERLKIEAP 193

Query: 188 ENSPNTDGIHVSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVTCGPGHGISVGSLGK 247
           + SPNTDGIH+  SE + I+ + I TGDDC+S+GD  K + I  +TCGPGHGIS+GSLGK
Sbjct: 194 DESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGK 253

Query: 248 YTKEKEVAGVMVNKCKLINTSNGVRIKTWPDSAGVYPATDLHFEDIEMVNVSNPIIIDQE 307
           +  E+ V G+ ++ C + NTSNG RIKTWP   G    +++HFEDI M NVS+PI+IDQ+
Sbjct: 254 FQNEEPVEGIKISNCTITNTSNGARIKTWPGEHG-GAVSEIHFEDITMNNVSSPILIDQQ 313

Query: 308 YCPSNHCNKNIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACEGVKVTDIDLTYIGS 350
           YCP N C KN  SK+K+SN+SFKNIRGT   P AIKF+CS    C+ V++ DID+ + G+
Sbjct: 314 YCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDIKHNGA 373

[Close]

BLAST of CmUC02G028360 vs. ExPASy Swiss-Prot
Match: Q39766 (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 2.6e-96
Identity = 181/389 (46.53%), Postives = 246/389 (63.24%), Query Frame = 0


Query: 8   LLLWLASTSKGQSVFDVTT-YGAKPN--TDITQALANAWKDACASTIPSKLLIPEGVYQL 67
           LLL+++++      FDV   +GAK +  TD+++   +AWK+ACAS  PS ++IP+G Y L
Sbjct: 15  LLLFISASKVQPDAFDVVAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVIPKGTYLL 74

Query: 68  NQSNLNGHCKSSIEVQVEGTLQAPLDP-----------------------IGDG------ 127
           ++ NL G CK+ IE+ V+GT+QAP DP                       I DG      
Sbjct: 75  SKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWVRFYSVENFKMFGGGIFDGQGSIAY 134

Query: 128 ---------------LNLRFSFVTNSIVKDITSLNSKSFHINLLGCKNVTFQNVTIIAPE 187
                          +N+RF FVTN++++DITS +SK FHIN+  CKN+T + + I AP+
Sbjct: 135 EKNTCENREFRSKLPVNIRFDFVTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPD 194

Query: 188 NSPNTDGIHVSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVTCGPGHGISVGSLGKY 247
            SPNTDGIH+  SE + I+ + I TGDDC+S+GD  K + I  +TCGPGHGIS+GSLGK+
Sbjct: 195 ESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKF 254

Query: 248 TKEKEVAGVMVNKCKLINTSNGVRIKTWPDSAGVYPATDLHFEDIEMVNVSNPIIIDQEY 307
             E+ V G+ ++ C + NTSNG RIKTWP   G    +++HFEDI M NVS+PI+IDQ+Y
Sbjct: 255 QNEEPVEGIKISNCTITNTSNGARIKTWPGEHG-GAVSEIHFEDITMNNVSSPILIDQQY 314

Query: 308 CPSNHCNKNIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACEGVKVTDIDLTYIGSR 350
           CP N C KN  SK+K+SN+SFKNIRGT   P AIKF+CS    C+ V++ DID+ + G+ 
Sbjct: 315 CPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDIQHNGAE 374

[Close]

BLAST of CmUC02G028360 vs. ExPASy Swiss-Prot
Match: P24548 (Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 9.3e-94
Identity = 173/360 (48.06%), Postives = 227/360 (63.06%), Query Frame = 0


Query: 34  DITQALANAWKDACASTIPSKLLIPEGVYQLNQSNLNGHCKSSIEVQVEGTLQAPLDP-- 93
           D TQAL  AWK+ACAS  PS +L+P+G + +    L G CKSSI +Q++GTL+AP DP  
Sbjct: 1   DSTQALTTAWKEACASASPSTILVPKGNFAVGLITLEGPCKSSIGLQLQGTLKAPADPSK 60

Query: 94  ---------------------IGDG----------------------LNLRFSFVTNSIV 153
                                + DG                      +NLR   VTNSI+
Sbjct: 61  IKGLGWINLNKIDLLTIFGGGVFDGQGKSAWVQNDCHKNGPICKTLSMNLRLYAVTNSIL 120

Query: 154 KDITSLNSKSFHINLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEEIKILNTQISTGDD 213
           +D+T+L+SK+FH+N++GCKN+TF+   I A E S NTDGIH+  S+ + I+NT+I TGDD
Sbjct: 121 RDVTTLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGDD 180

Query: 214 CVSVGDSNKQITITNVTCGPGHGISVGSLGKYTKEKEVAGVMVNKCKLINTSNGVRIKTW 273
           C+S+GD +K I ITN+TCGPGHGISVGSLG+Y  E+ V G+ V  C +  + NGVRIKTW
Sbjct: 181 CISLGDGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCTITGSQNGVRIKTW 240

Query: 274 PDSAGVYPATDLHFEDIEMVNVSNPIIIDQEYCPSNHCNKNIPSKIKISNVSFKNIRGTC 333
           P S     A+++HF+DI M +V  PI+IDQ YCP N C   +PS +K+S +SFKNI+GT 
Sbjct: 241 PKSE-PGEASEMHFQDITMNSVGTPILIDQGYCPYNQCTAEVPSSVKLSKISFKNIKGTS 300

Query: 334 VTPVAIKFVCSKDVACEGVKVTDIDLTYIGSRGPITSQCANVLNPIITGKQNPRACAEAA 349
            T  A+K VCSK   C GV++ DIDLTY G  GP TS C N+  P I GKQ P  C+ +A
Sbjct: 301 TTKEAVKLVCSKSFPCNGVELADIDLTYSGKGGPATSVCENI-KPTIKGKQIPAICSGSA 358

[Close]

BLAST of CmUC02G028360 vs. ExPASy TrEMBL
Match: A0A5D3DDK3 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold150G00030 PE=3 SV=1)

HSP 1 Score: 549.7 bits (1415), Expect = 9.2e-153
Identity = 286/395 (72.41%), Postives = 314/395 (79.49%), Query Frame = 0


Query: 4   LILPLLLWLASTSKGQSVFDVTTYGAKPNTDITQALANAWKDACASTIPSKLLIPEGVYQ 63
           L+L +LL LAST+K QS+FD+TTYGAKPNTDITQ LANAWKDACAST PS+LLIP GVYQ
Sbjct: 10  LLLHVLLMLASTAKCQSIFDITTYGAKPNTDITQVLANAWKDACASTNPSQLLIPTGVYQ 69

Query: 64  LNQSNLNGHCKSSIEVQVEGTLQAPLDPIGDGL--------------------------- 123
           LNQS L G C S+IEV++EGTLQA  DPIG GL                           
Sbjct: 70  LNQSLLIGPCNSTIEVRMEGTLQAHPDPIGIGLVLFRHIDQLTISGTGAFDGQGEKGWEK 129

Query: 124 --------------NLRFSFVTNSIVKDITSLNSKSFHINLLGCKNVTFQNVTIIAPENS 183
                         N+RF+F+TNSIVKDITSL+SK+FHINLL CKNVTFQNVTIIAPE S
Sbjct: 130 NDCHLKKACTRLPMNVRFNFITNSIVKDITSLDSKNFHINLLSCKNVTFQNVTIIAPEKS 189

Query: 184 PNTDGIHVSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVTCGPGHGISVGSLGKYTK 243
           PNTDGIHVS+SEEI ILNT+ISTGDDCVSVGD NKQITITNVTCGPGHGIS+GSLGKYT 
Sbjct: 190 PNTDGIHVSNSEEINILNTKISTGDDCVSVGDGNKQITITNVTCGPGHGISIGSLGKYTT 249

Query: 244 EKEVAGVMVNKCKLINTSNGVRIKTWPDSAGVYPATDLHFEDIEMVNVSNPIIIDQEYCP 303
           EKEVAGV V  C LINTSNGVRIK+WPDSA  Y A+DLHFEDIEMVNVSNPIIIDQEYCP
Sbjct: 250 EKEVAGVTVKSCNLINTSNGVRIKSWPDSAVAYTASDLHFEDIEMVNVSNPIIIDQEYCP 309

Query: 304 SNHCNKNIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACEGVKVTDIDLTYIGSRGP 358
           SN CNK IPSKIKI NVSFKNIRGT  TPVAIKF+CSKD+ CE V+V DI+L+Y G++G 
Sbjct: 310 SNQCNKKIPSKIKIRNVSFKNIRGTSATPVAIKFICSKDLPCEDVEVADINLSYTGTQGR 369

[Close]

BLAST of CmUC02G028360 vs. ExPASy TrEMBL
Match: A0A1S3C129 (exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103495658 PE=3 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 1.7e-151
Identity = 285/395 (72.15%), Postives = 313/395 (79.24%), Query Frame = 0


Query: 4   LILPLLLWLASTSKGQSVFDVTTYGAKPNTDITQALANAWKDACASTIPSKLLIPEGVYQ 63
           L+L LLL LAST+K QS+FD+TTYGAKPNTDITQ LANAWKDACAST PS+LLIP GVYQ
Sbjct: 131 LLLHLLLMLASTAKCQSIFDITTYGAKPNTDITQVLANAWKDACASTNPSQLLIPTGVYQ 190

Query: 64  LNQSNLNGHCKSSIEVQVEGTLQAPLDPIGDGL--------------------------- 123
           LNQS L G C S+IEV++EGTLQA  DPIG GL                           
Sbjct: 191 LNQSLLIGPCNSTIEVRMEGTLQAHPDPIGIGLVLFRHIDQLTISGTGAFDGQGEKGWEK 250

Query: 124 --------------NLRFSFVTNSIVKDITSLNSKSFHINLLGCKNVTFQNVTIIAPENS 183
                         N+RF+F+TNSIVKDITSL+SK+FHINLL CKNVTFQNVTIIAPE S
Sbjct: 251 NDCHLKKACTRLPMNVRFNFITNSIVKDITSLDSKNFHINLLSCKNVTFQNVTIIAPEKS 310

Query: 184 PNTDGIHVSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVTCGPGHGISVGSLGKYTK 243
           PNTDGIHVS+SEEI ILNT+ISTGDDCVSVGD NKQITITNVTCGPGHGIS+GSLGKYT 
Sbjct: 311 PNTDGIHVSNSEEINILNTKISTGDDCVSVGDGNKQITITNVTCGPGHGISIGSLGKYTT 370

Query: 244 EKEVAGVMVNKCKLINTSNGVRIKTWPDSAGVYPATDLHFEDIEMVNVSNPIIIDQEYCP 303
           EKEVAGV V  C LINTSNGVRIK+WPDSA  Y A+DLHFEDIEMVNVSNPIIIDQEYCP
Sbjct: 371 EKEVAGVTVKSCNLINTSNGVRIKSWPDSAVAYTASDLHFEDIEMVNVSNPIIIDQEYCP 430

Query: 304 SNHCNKNIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACEGVKVTDIDLTYIGSRGP 358
           SN CNK IPSKIKI NVSFKNIRGT  T VAIKF+CSKD+ C+ V+V DI+L+Y G++G 
Sbjct: 431 SNQCNKKIPSKIKIRNVSFKNIRGTSATFVAIKFICSKDLPCDDVEVADINLSYTGTQGR 490

[Close]

BLAST of CmUC02G028360 vs. ExPASy TrEMBL
Match: A0A5D3D708 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold295G00680 PE=3 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 1.7e-146
Identity = 275/399 (68.92%), Postives = 312/399 (78.20%), Query Frame = 0


Query: 1   MALLILPLLLWLASTSKGQSVFDVTTYGAKPNTDITQALANAWKDACASTIPSKLLIPEG 60
           +ALL   LLL LAST +GQS+FDVTTYGAKPNTDITQALANAW +ACAST PS LLIP+G
Sbjct: 4   LALLPFLLLLSLASTIQGQSIFDVTTYGAKPNTDITQALANAWTEACASTTPSTLLIPKG 63

Query: 61  VYQLNQSNLNGHCKS-SIEVQVEGTLQAPLDPIGDGL----------------------- 120
           VYQL+QSNL G CKS  I+VQVEGTLQAP+   GDGL                       
Sbjct: 64  VYQLSQSNLKGPCKSVPIQVQVEGTLQAPIHTKGDGLVLFSYIDQLILSGSGVFDGQGKS 123

Query: 121 ------------------NLRFSFVTNSIVKDITSLNSKSFHINLLGCKNVTFQNVTIIA 180
                             NL+FSFVTNS VKDITSL+SK+FHINLLGCKNVTFQ+VTIIA
Sbjct: 124 GWEKNNCHKKKICTKLPMNLKFSFVTNSTVKDITSLDSKNFHINLLGCKNVTFQHVTIIA 183

Query: 181 PENSPNTDGIHVSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVTCGPGHGISVGSLG 240
           P+ SPNTDGIH+SSSEEI IL+++I+TGDDCVSVGDSNKQ+TITNVTCGPGHGIS+GSLG
Sbjct: 184 PDESPNTDGIHISSSEEIYILDSKIATGDDCVSVGDSNKQVTITNVTCGPGHGISIGSLG 243

Query: 241 KYTKEKEVAGVMVNKCKLINTSNGVRIKTWPDSAGVYPATDLHFEDIEMVNVSNPIIIDQ 300
           KYTKEK+V GV V  CK+ NT+NGVRIKTWPDSA  + A+D+HFEDIEM NVSNPIIIDQ
Sbjct: 244 KYTKEKDVVGVTVKACKIFNTTNGVRIKTWPDSAVAFMASDMHFEDIEMENVSNPIIIDQ 303

Query: 301 EYCPSNHCNKNIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACEGVKVTDIDLTYIG 358
           EYCP N CN+ +PSKIKISNVSFKNIRGT  TPVA+K VCSK + CEGV+V DI+LTY G
Sbjct: 304 EYCPWNQCNRKVPSKIKISNVSFKNIRGTSATPVAVKLVCSKSIPCEGVEVADINLTYSG 363

[Close]

BLAST of CmUC02G028360 vs. ExPASy TrEMBL
Match: A0A5A7UTD3 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G00800 PE=3 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 1.4e-145
Identity = 271/394 (68.78%), Postives = 308/394 (78.17%), Query Frame = 0


Query: 1   MALLILPLLLWLASTSKGQSVFDVTTYGAKPNTDITQALANAWKDACASTIPSKLLIPEG 60
           +ALL   LLL LAST +GQS+FDVTTYGAKPNTDITQALANAW +ACAST PS LLIP+G
Sbjct: 4   LALLPFLLLLSLASTIQGQSIFDVTTYGAKPNTDITQALANAWTEACASTTPSTLLIPKG 63

Query: 61  VYQLNQSNLNGHCKS-SIEVQVEGTLQAPLDPIGDGL----------------------- 120
           VYQL+QSNL G CKS  I+VQVEGTLQAP+   GDGL                       
Sbjct: 64  VYQLSQSNLKGPCKSVPIQVQVEGTLQAPIHTKGDGLVLFSYIDQLILSGSGVFDGQGKS 123

Query: 121 ------------------NLRFSFVTNSIVKDITSLNSKSFHINLLGCKNVTFQNVTIIA 180
                             NL+FSFVTNS VKDITSL+SK+FHINLLGCKNVTFQ+VTIIA
Sbjct: 124 GWEKNNCHKKKICTKLPMNLKFSFVTNSTVKDITSLDSKNFHINLLGCKNVTFQHVTIIA 183

Query: 181 PENSPNTDGIHVSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVTCGPGHGISVGSLG 240
           P+ SPNTDGIH+SSSEEI IL+++I+TGDDCVSVGDSNKQ+TITNVTCGPGHGIS+GSLG
Sbjct: 184 PDESPNTDGIHISSSEEIYILDSKIATGDDCVSVGDSNKQVTITNVTCGPGHGISIGSLG 243

Query: 241 KYTKEKEVAGVMVNKCKLINTSNGVRIKTWPDSAGVYPATDLHFEDIEMVNVSNPIIIDQ 300
           KYTKEK+V GV V  CK+ NT+NGVRIKTWPDSA  + A+D+HFEDIEM NVSNPIIIDQ
Sbjct: 244 KYTKEKDVVGVTVKACKIFNTTNGVRIKTWPDSAVAFMASDMHFEDIEMENVSNPIIIDQ 303

Query: 301 EYCPSNHCNKNIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACEGVKVTDIDLTYIG 353
           EYCP N CN+ +PSKIKISNVSFKNIRGT  TPVA+K VCSK + CEGV+V DI+LTY G
Sbjct: 304 EYCPWNQCNRKVPSKIKISNVSFKNIRGTSATPVAVKLVCSKSIPCEGVEVADINLTYSG 363

[Close]

BLAST of CmUC02G028360 vs. ExPASy TrEMBL
Match: A0A5D3BSV2 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00060 PE=3 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.9e-145
Identity = 271/394 (68.78%), Postives = 308/394 (78.17%), Query Frame = 0


Query: 1   MALLILPLLLWLASTSKGQSVFDVTTYGAKPNTDITQALANAWKDACASTIPSKLLIPEG 60
           +ALL   LLL LAST +GQS+FDVTTYGAKPNTDITQALANAW +ACAST PS LLIP+G
Sbjct: 4   LALLPFLLLLSLASTIQGQSIFDVTTYGAKPNTDITQALANAWTEACASTTPSTLLIPKG 63

Query: 61  VYQLNQSNLNGHCKS-SIEVQVEGTLQAPLDPIGDGL----------------------- 120
           VYQL+QSNL G CKS  I+VQVEGTLQAP+   GDGL                       
Sbjct: 64  VYQLSQSNLKGPCKSVPIQVQVEGTLQAPIHTKGDGLVLFSYIDQLILSGSGVFDGQGKS 123

Query: 121 ------------------NLRFSFVTNSIVKDITSLNSKSFHINLLGCKNVTFQNVTIIA 180
                             NL+FSFVTNS VKDITSL+SK+FHINLLGCKNVTFQ+VTIIA
Sbjct: 124 GWEKNNCHKKKICTKLPMNLKFSFVTNSTVKDITSLDSKNFHINLLGCKNVTFQHVTIIA 183

Query: 181 PENSPNTDGIHVSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVTCGPGHGISVGSLG 240
           P+ SPNTDGIH+SSSEEI IL+++I+TGDDCVSVGDSNKQ+TITNVTCGPGHGIS+GSLG
Sbjct: 184 PDESPNTDGIHISSSEEIYILDSKIATGDDCVSVGDSNKQVTITNVTCGPGHGISIGSLG 243

Query: 241 KYTKEKEVAGVMVNKCKLINTSNGVRIKTWPDSAGVYPATDLHFEDIEMVNVSNPIIIDQ 300
           KYTKEK+V GV V  CK+ NT+NGVRIKTWPDSA  + A+D+HFEDIEM NVSNPIIIDQ
Sbjct: 244 KYTKEKDVVGVTVKACKIFNTTNGVRIKTWPDSAVAFMASDMHFEDIEMENVSNPIIIDQ 303

Query: 301 EYCPSNHCNKNIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACEGVKVTDIDLTYIG 353
           EYCP N CN+ +PSKIKISNVSFKNIRGT  TPVA+K VCSK + CEGV+V DI+LTY G
Sbjct: 304 EYCPWNQCNRKVPSKIKISNVSFKNIRGTSATPVAVKLVCSKSIPCEGVEVADINLTYSG 363

[Close]

BLAST of CmUC02G028360 vs. TAIR 10
Match: AT3G07820.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 342.4 bits (877), Expect = 4.3e-94
Identity = 173/369 (46.88%), Postives = 241/369 (65.31%), Query Frame = 0


Query: 23  DVTTYGAKPNTDITQALANAWKDACASTIPSKLLIPEGVYQLNQSNLNGHCKSSIEVQVE 82
           +V T G+   +DITQAL  A+  AC S+ PSK++IP+G ++L +  + G CK+ IEV ++
Sbjct: 23  EVFTIGSSSGSDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQ 82

Query: 83  GTLQAPLDPI------------------------GDG-------------------LNLR 142
           GT++A  + I                        G+G                   +++R
Sbjct: 83  GTVKADGNAIQGKEKWVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIR 142

Query: 143 FSFVTNSIVKDITSLNSKSFHINLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEEIKIL 202
           F F+ NS ++DI+S+++K+FHIN+LG KN+T  N+ I+APE+SPNTDGIH+  S+ +KIL
Sbjct: 143 FDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKIL 202

Query: 203 NTQISTGDDCVSVGDSNKQITITNVTCGPGHGISVGSLGKYTKEKEVAGVMVNKCKLINT 262
           N+ ISTGDDC+SVGD  K + +  VTCGPGHGISVGSLG+Y  E++V+G+ V  C L  T
Sbjct: 203 NSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQET 262

Query: 263 SNGVRIKTWPDSAGVYPATDLHFEDIEMVNVSNPIIIDQEYCPSNHCNKNIPSKIKISNV 322
            NG+RIKTWP +A    A+D+HFEDI + +VSNPI+IDQEYCP N CNK   S IK+ N+
Sbjct: 263 DNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNI 322

Query: 323 SFKNIRGTCVTPVAIKFVCSKDVACEGVKVTDIDLTYIGSRGPITSQCANVLNPIITGKQ 349
           SFKNIRGT     A+K +CSK   C+ V++ DID+ Y G+ GP T  C+NV +P I G Q
Sbjct: 323 SFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNV-SPKILGSQ 382

[Close]

BLAST of CmUC02G028360 vs. TAIR 10
Match: AT3G07840.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 330.9 bits (847), Expect = 1.3e-90
Identity = 171/377 (45.36%), Postives = 237/377 (62.86%), Query Frame = 0


Query: 12  LASTSKGQSVFDVTTYGAKPNTDITQALANAWKDACASTIPSKLLIPEGVYQLNQSNLNG 71
           L   S    VF+V   G  P +DITQAL  A+  AC +   SK++I +G ++L +  + G
Sbjct: 16  LLGFSANAEVFNV---GGSPGSDITQALLKAFTSACQAPTASKVVITKGEFKLGEIEMTG 75

Query: 72  HCKSSIEVQVEGTLQAPLDPI------------------------GDG------------ 131
            CK+ +E+ ++GTL+A    I                        G+G            
Sbjct: 76  PCKAPVEINLQGTLKADGKAIQGKERWVVFLRINGFKLNGGGIFDGEGNAAWRVNNCHKT 135

Query: 132 -------LNLRFSFVTNSIVKDITSLNSKSFHINLLGCKNVTFQNVTIIAPENSPNTDGI 191
                  +++RF FV N+ ++DI+S+++K+FHIN+LG KN+TF NV +IAP  SPNTDGI
Sbjct: 136 FECKKLPISIRFDFVENAEIRDISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGI 195

Query: 192 HVSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVTCGPGHGISVGSLGKYTKEKEVAG 251
           H+  SE +KILN++I+TGDDC+SVGD  K + + NV CGPGHGISVGSLG+Y  E++V G
Sbjct: 196 HLGRSEGVKILNSKIATGDDCISVGDGMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTG 255

Query: 252 VMVNKCKLINTSNGVRIKTWPDSAGVYPATDLHFEDIEMVNVSNPIIIDQEYCPSNHCNK 311
           + V  C L  T NG+RIKTWP +A    A+ +HFE+I + NVSNPI+IDQEYCP N CNK
Sbjct: 256 ITVVNCTLQGTDNGLRIKTWPSAACATTASGIHFENIILNNVSNPILIDQEYCPWNQCNK 315

Query: 312 NIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACEGVKVTDIDLTYIGSRGPITSQCA 346
             PS IK+ ++SFKNIRGT     A+K +CSK   C  V++ +I+L Y G+ GP T  C+
Sbjct: 316 QKPSTIKLVDISFKNIRGTSGNKDAVKLLCSKAHPCANVEIGNINLEYKGADGPPTFMCS 375

[Close]

BLAST of CmUC02G028360 vs. TAIR 10
Match: AT5G48140.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 330.1 bits (845), Expect = 2.2e-90
Identity = 172/385 (44.68%), Postives = 241/385 (62.60%), Query Frame = 0


Query: 12  LASTSKGQSVFDVTTYGAKPNTDITQALANAWKDACASTIPSKLLIPEGVYQLNQSNLNG 71
           L   S    +F++    + P +DIT AL  A+ +AC     S ++IP+G Y+L +  + G
Sbjct: 16  LLGLSANAKIFNI---NSPPGSDITNALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMG 75

Query: 72  HCKSSIEVQVEGTLQAPLDPIG---------------------DG--------------- 131
            CK+ I + + GT++A  +  G                     DG               
Sbjct: 76  PCKAPIRIALLGTVKADGNANGKEKWVAFRNINGFKLNGGGVFDGEGNAAWRVNNCHKTF 135

Query: 132 ------LNLRFSFVTNSIVKDITSLNSKSFHINLLGCKNVTFQNVTIIAPENSPNTDGIH 191
                 +++RF FVT++ ++ ITSL++K FHIN++G KNVTF++V IIAP  SPNTDGIH
Sbjct: 136 NCKKLPISIRFDFVTDAKIRGITSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIH 195

Query: 192 VSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVTCGPGHGISVGSLGKYTKEKEVAGV 251
           V  S+ IKI+N+ ISTGDDCVSVGD  K + +  VTCGPGHGIS+GSLG+Y+ E+ V+G+
Sbjct: 196 VGRSDGIKIINSFISTGDDCVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGI 255

Query: 252 MVNKCKLINTSNGVRIKTWPDSAGVYPATDLHFEDIEMVNVSNPIIIDQEYCPSNHCNKN 311
            +  C L  T NG+RIKTWP +A    A+D+HFE+I + NVSNPI+IDQEYCP N CNK 
Sbjct: 256 KIINCTLQETDNGLRIKTWPSAACTTTASDIHFENILLKNVSNPILIDQEYCPWNQCNKQ 315

Query: 312 IPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACEGVKVTDIDLTYIGSRGPITSQCAN 355
            PS IK++N+SFK IRGT     A+K +CSK   C+ V+V D+++ Y G+ GP T QC+N
Sbjct: 316 KPSTIKLANISFKKIRGTSGNKDAVKLLCSKGYPCQNVEVGDVNIQYTGADGPATFQCSN 375

[Close]

BLAST of CmUC02G028360 vs. TAIR 10
Match: AT3G07830.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 323.6 bits (828), Expect = 2.1e-88
Identity = 168/375 (44.80%), Postives = 234/375 (62.40%), Query Frame = 0


Query: 23  DVTTYGAKPNTDITQALANAWKDACASTIPSKLLIPEGVYQLNQSNLNGHCKSSIEVQVE 82
           +V    + P +DITQAL  A+  AC S  P K++IP+G ++L +  ++G CKS +E+ + 
Sbjct: 24  EVLRLTSSPGSDITQALLRAFTTACQSPTPRKVVIPKGQFKLGEIMMSGPCKSPVEITLL 83

Query: 83  GTLQAPLDPI------------------------GDG-------------------LNLR 142
           GT+ A  + I                        G+G                   +++R
Sbjct: 84  GTVLADGNSIHGKEKWVVFQRMDGFRLNGGGTFDGEGNAAWRVNNCHKTFECKKLPISIR 143

Query: 143 FSFVTNSIVKDITSLNSKSFHINLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEEIKIL 202
           F FVTN+ ++DI+S+++K+FHIN++G KN+TF NV I+AP  SPNTDGIH+  S  + I+
Sbjct: 144 FDFVTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGVSII 203

Query: 203 NTQISTGDDCVSVGDSNKQITITNVTCGPGHGISVGSLGKYTKEKEVAGVMVNKCKLINT 262
           N++ISTGDDCVSVGD    + + NV CGPGHGISVGSLG+Y  E++V+G+ V  C L  T
Sbjct: 204 NSRISTGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTLQET 263

Query: 263 SNGVRIKTWPDSAGVYPATDLHFEDIEMVNVSNPIIIDQEYCPSNHCNKNIPSKIKISNV 322
            NG+RIKTWP +A    A+++HFE+I + NVSNPI+IDQEYCP N CNK   S IK++N+
Sbjct: 264 DNGLRIKTWPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQCNKQKSSSIKLANI 323

Query: 323 SFKNIRGTCVTPVAIKFVCSKDVACEGVKVTDIDLTYIGSRGPITSQCANVLNPIITGKQ 355
           SF+ IRGT     A+K +CSK   CE V+V DI++ Y G+ GP T  C+NV  P + G Q
Sbjct: 324 SFRRIRGTSGNKDAVKLLCSKGYPCENVQVGDINIQYTGADGPATFMCSNV-RPKLVGTQ 383

[Close]

BLAST of CmUC02G028360 vs. TAIR 10
Match: AT3G14040.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 305.1 bits (780), Expect = 7.6e-83
Identity = 162/380 (42.63%), Postives = 222/380 (58.42%), Query Frame = 0


Query: 18  GQSVFDVTTYGAKPN--TDITQALANAWKDACASTIPSKLLIPEGVYQLNQSNLNGHCKS 77
           G +  DV   GAK +  TD + A A AWK+ACA+   S + +P+G Y +      G CK 
Sbjct: 67  GGASLDVKASGAKGDGKTDDSAAFAAAWKEACAA--GSTITVPKGEYLVESLEFKGPCKG 126

Query: 78  SIEVQVEGTLQAPL-------------------------DPIGDG--------------- 137
            + +++ G  +AP                            I DG               
Sbjct: 127 PVTLELNGNFKAPATVKTTKPHAGWIDFENLADFTLNGNKAIFDGQGSLAWKANDCAKTG 186

Query: 138 ------LNLRFSFVTNSIVKDITSLNSKSFHINLLGCKNVTFQNVTIIAPENSPNTDGIH 197
                 +N+RF+ +TNS +  ITS NSK FH+N+L CKN+T  ++ I AP  S NTDGIH
Sbjct: 187 KCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIH 246

Query: 198 VSSSEEIKILNTQISTGDDCVSVGDSNKQITITNVTCGPGHGISVGSLGKYTKEKEVAGV 257
           +  S  + ++  +I TGDDCVS+GD  + + + NV CGPGHGIS+GSLG+Y  E+ V GV
Sbjct: 247 IGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGV 306

Query: 258 MVNKCKLINTSNGVRIKTWPDS-AGVYPATDLHFEDIEMVNVSNPIIIDQEYCPSNHCNK 317
            V KC + NT NGVRIKTWP S  G+  A+++ FEDI M NVS P++IDQEYCP  HC  
Sbjct: 307 TVRKCLIKNTDNGVRIKTWPGSPPGI--ASNILFEDITMDNVSLPVLIDQEYCPYGHCKA 366

Query: 318 NIPSKIKISNVSFKNIRGTCVTPVAIKFVCSKDVACEGVKVTDIDLTYIGSRGPITSQCA 349
            +PSK+K+S+V+ KNI+GT  T VA+K +CSK V C  + ++DI+L + G  GP  S C+
Sbjct: 367 GVPSKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACS 426

The following BLAST results are available for this feature:

BLAST of CmUC02G028360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031744868.1	1.3e-156	73.67	exopolygalacturonase [Cucumis sativus]	[more]
KAA0059139.1	1.9e-152	72.41	exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK21608.1 exopolygalactur...	[more]
XP_008455507.2	3.6e-151	72.15	PREDICTED: exopolygalacturonase-like [Cucumis melo]	[more]
XP_031744817.1	1.4e-147	68.67	exopolygalacturonase-like [Cucumis sativus] >KAE8645715.1 hypothetical protein C...	[more]
XP_031744814.1	1.4e-147	68.67	exopolygalacturonase-like [Cucumis sativus] >XP_031744815.1 LOW QUALITY PROTEIN:...	[more]

BLAST of CmUC02G028360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q05967	1.3e-100	50.26	Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1	[more]
Q40312	2.5e-99	47.01	Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1	[more]
Q39786	1.5e-96	47.44	Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1	[more]
Q39766	2.6e-96	46.53	Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1	[more]
P24548	9.3e-94	48.06	Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1	[more]

BLAST of CmUC02G028360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DDK3	9.2e-153	72.41	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3C129	1.7e-151	72.15	exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103495658 PE=3 SV=1	[more]
A0A5D3D708	1.7e-146	68.92	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5A7UTD3	1.4e-145	68.78	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A5D3BSV2	1.9e-145	68.78	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

BLAST of CmUC02G028360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07820.1	4.3e-94	46.88	Pectin lyase-like superfamily protein	[more]
AT3G07840.1	1.3e-90	45.36	Pectin lyase-like superfamily protein	[more]
AT5G48140.1	2.2e-90	44.68	Pectin lyase-like superfamily protein	[more]
AT3G07830.1	2.1e-88	44.80	Pectin lyase-like superfamily protein	[more]
AT3G14040.1	7.6e-83	42.63	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 271..293 e-value: 2700.0 score: 4.2 coord: 237..258 e-value: 5400.0 score: 2.0 coord: 153..174 e-value: 1400.0 score: 6.1 coord: 206..227 e-value: 260.0 score: 10.4 coord: 176..196 e-value: 3800.0 score: 3.1 coord: 126..152 e-value: 2.3 score: 17.2
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 98..332 e-value: 6.0E-78 score: 262.2
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 183..196
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 96..353 e-value: 7.4E-75 score: 254.4 coord: 10..95 e-value: 8.7E-14 score: 53.2
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 8..92
None	No IPR available	PANTHER	PTHR31375:SF248	POLYGALACTURONASE	coord: 95..348
None	No IPR available	PANTHER	PTHR31375:SF248	POLYGALACTURONASE	coord: 8..92
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 95..348
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 7..336

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC02G028360.1	CmUC02G028360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity