CmUC02G027220 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTGAAATGGTGCAAAATAATTGAGAGAGATTCATATAGACCATAATACTATAATATAATATAAGAAGTATACTTATAATGAGAGTTTGATTTTCTTCTGTGGAGCGTTTTTCACTCCACTCTTCAACCCAAACATATTTCCCTTCTCTCCCTTTCTCTTCGATCTTTGGAGGGTTTTGTTCAAGTTTTTGAGAATATTTCAGAATCTTCTTCCTATTCACTTTCTCCTAAAAAGCACTTTCTCTATTGCTTCCACTTCCAATCTAATCATATTTTTCTCCATTACCAAATACCAAAAAGGATTTTAAAAGAAAACCCATGTCTTCATTTCGCCTAAAAATGCCTCCTCTTACATCCACGTCCATTTGTTTCATTTTCTTGTGCATCGCAACAAATTTTCATTCTTCTTCAGCCGGTTTTCTCGTCGAACCGGTTTCCGGTCAAAGCCAACCGCTAAATCCTGGCCAGTACTCATCCCCCAACACGGTTCCGGCATTTCCGGTTCAAACCCAGATGCAAATTTGCCACCTGGATCTCTCCGACGAGCTCTTCGGCGGCGTTAGGGAGGCTTGCGGTCGAGACTTGGACCGGAGTCGCTGCTGTCCGGTTCTTGCCGCGTGGCTTTTCGCTGCTCACGCTCGGGCCGCTCTGAAGATTGCTGCTCCGGCACCGGCAGCGGCGGCGGACCTTCCGATGATGCCGGACGACTCGCAGAAATGCGTGAACTCGCTGCAGACGTCACTGTTGAGTCGTAACATTAGGATTCCGCAGCCGAATGCGAGCTGCGACGCCGTTTTGTGCTTCTGTGGGATTCGGCTTCATCAAATTAGCTCGTTGTCTTGCCCCGCTGCCTTCAATGTCTCTGGCGGCGGTAACGGCGGATACCGTAACGCCACCCCGACGGCCGCCGTCCGCAATCTTGAAAAGAATTGCCGGAACTCGTCGTATTCTGGCTGCACCAAATGCCTCGGTGCCCTTCAAAAGGTAAAATCATAAATGAAGATTTTATGTAAAAATTATGTTTAGTGTTCTAATGGGTTGATTAATCTCCGTTTAATTAGATTGAAAGGTTTGTTAATTAATTGTAGATTAATATTTCTTAAAAAAGGATATATATATATATAAATATTGTATTGGGATTAGCCTTGAGAATATTAGGGCAATTTGACGGACTATTTGTTATCTTGTTTCTAGTATTTTATTTTTCATTTTTTAAAACAAAACTCTATTTGACACATGTTTCATTTTTGTAATTATTATGTAACATTTCATTTTTTAGAAATTTGATATATTTTTCATGGCAATACTTTTATTTCTATTTATGATCAAATTGAAGCTAGGAAAGAAAAGATGATTATAGATTTAATTGAATTTAAAAATTTAAAATGATATAATTTTGAATTTAAAAATCAATTTAACAAAGAATTAAAAATGAAGTGAAGTAGAAAGTTGTTTTAAAACAAATGTTTTTTTAATTTTAGTTTTACCGGGTAGGAATAAGGGAATAATAGAGTTTTGAGGACCTACCCTACGCCTACCCATGTGCCTATTCCCTAGTTTATTTTCCTATTTGGAAATCAGTACATAGAGTGTAATTAAAAAGTGTGTTTGGACACTAAGATATAATGTTCTTTGTCGGGATTGATAATTCCAGGTTACGGGAACGAAGAAGAACGCTACCAACGACAGAGCCAGCAAAATGTTCAATAGAGACTGCCAGCTCATGGGCCTGACGTGGCTACTTGCTCGTAACAAAACGACGTACATTCCCACCGTTTCGGCCGTACTCCGAGCCATCATGTACAGCGCTCACCCTCCTCACGAGTCTACGTGTAGTCCGGACCAAGAGAACATGCCGCTAGCCGTCGACTCTTTACAGATGGAAAAGGCGCAGTCCTCATCTCCACCGTCCATTTCTTTGTTTCCGATTATACCCCTACTGATTTCTGTTTATTGGCTTGCTTGGTAGTGGCAGTACTCCGGGGTAATTATGGGTTTTGTAATCCATTTGTTTTGTTATTTTTTTGACAAGGGGGAGGGGTACCCTTGTCGGGTTCACGTGAAGCTAATAGACAAAAAAAAAAAAAAAAAAAGGGTTGATTGAGGGGCTTTTTTGTCTTTTCACAACACTGTAAATGTCAAATCTGGGGGTTTTTA TTTTGAAATGGTGCAAAATAATTGAGAGAGATTCATATAGACCATAATACTATAATATAATATAAGAAGTATACTTATAATGAGAGTTTGATTTTCTTCTGTGGAGCGTTTTTCACTCCACTCTTCAACCCAAACATATTTCCCTTCTCTCCCTTTCTCTTCGATCTTTGGAGGGTTTTGTTCAAGTTTTTGAGAATATTTCAGAATCTTCTTCCTATTCACTTTCTCCTAAAAAGCACTTTCTCTATTGCTTCCACTTCCAATCTAATCATATTTTTCTCCATTACCAAATACCAAAAAGGATTTTAAAAGAAAACCCATGTCTTCATTTCGCCTAAAAATGCCTCCTCTTACATCCACGTCCATTTGTTTCATTTTCTTGTGCATCGCAACAAATTTTCATTCTTCTTCAGCCGGTTTTCTCGTCGAACCGGTTTCCGGTCAAAGCCAACCGCTAAATCCTGGCCAGTACTCATCCCCCAACACGGTTCCGGCATTTCCGGTTCAAACCCAGATGCAAATTTGCCACCTGGATCTCTCCGACGAGCTCTTCGGCGGCGTTAGGGAGGCTTGCGGTCGAGACTTGGACCGGAGTCGCTGCTGTCCGGTTCTTGCCGCGTGGCTTTTCGCTGCTCACGCTCGGGCCGCTCTGAAGATTGCTGCTCCGGCACCGGCAGCGGCGGCGGACCTTCCGATGATGCCGGACGACTCGCAGAAATGCGTGAACTCGCTGCAGACGTCACTGTTGAGTCGTAACATTAGGATTCCGCAGCCGAATGCGAGCTGCGACGCCGTTTTGTGCTTCTGTGGGATTCGGCTTCATCAAATTAGCTCGTTGTCTTGCCCCGCTGCCTTCAATGTCTCTGGCGGCGGTAACGGCGGATACCGTAACGCCACCCCGACGGCCGCCGTCCGCAATCTTGAAAAGAATTGCCGGAACTCGTCGTATTCTGGCTGCACCAAATGCCTCGGTGCCCTTCAAAAGTTTTACCGGGTTACGGGAACGAAGAAGAACGCTACCAACGACAGAGCCAGCAAAATGTTCAATAGAGACTGCCAGCTCATGGGCCTGACGTGGCTACTTGCTCGTAACAAAACGACGTACATTCCCACCGTTTCGGCCGTACTCCGAGCCATCATGTACAGCGCTCACCCTCCTCACGAGTCTACGTGTAGTCCGGACCAAGAGAACATGCCGCTAGCCGTCGACTCTTTACAGATGGAAAAGGCGCAGTCCTCATCTCCACCGTCCATTTCTTTGTTTCCGATTATACCCCTACTGATTTCTGTTTATTGGCTTGCTTGGTAGTGGCAGTACTCCGGGGTAATTATGGGTTTTGTAATCCATTTGTTTTGTTATTTTTTTGACAAGGGGGAGGGGTACCCTTGTCGGGTTCACGTGAAGCTAATAGACAAAAAAAAAAAAAAAAAAAGGGTTGATTGAGGGGCTTTTTTGTCTTTTCACAACACTGTAAATGTCAAATCTGGGGGTTTTTA ATGTCTTCATTTCGCCTAAAAATGCCTCCTCTTACATCCACGTCCATTTGTTTCATTTTCTTGTGCATCGCAACAAATTTTCATTCTTCTTCAGCCGGTTTTCTCGTCGAACCGGTTTCCGGTCAAAGCCAACCGCTAAATCCTGGCCAGTACTCATCCCCCAACACGGTTCCGGCATTTCCGGTTCAAACCCAGATGCAAATTTGCCACCTGGATCTCTCCGACGAGCTCTTCGGCGGCGTTAGGGAGGCTTGCGGTCGAGACTTGGACCGGAGTCGCTGCTGTCCGGTTCTTGCCGCGTGGCTTTTCGCTGCTCACGCTCGGGCCGCTCTGAAGATTGCTGCTCCGGCACCGGCAGCGGCGGCGGACCTTCCGATGATGCCGGACGACTCGCAGAAATGCGTGAACTCGCTGCAGACGTCACTGTTGAGTCGTAACATTAGGATTCCGCAGCCGAATGCGAGCTGCGACGCCGTTTTGTGCTTCTGTGGGATTCGGCTTCATCAAATTAGCTCGTTGTCTTGCCCCGCTGCCTTCAATGTCTCTGGCGGCGGTAACGGCGGATACCGTAACGCCACCCCGACGGCCGCCGTCCGCAATCTTGAAAAGAATTGCCGGAACTCGTCGTATTCTGGCTGCACCAAATGCCTCGGTGCCCTTCAAAAGTTTTACCGGGTTACGGGAACGAAGAAGAACGCTACCAACGACAGAGCCAGCAAAATGTTCAATAGAGACTGCCAGCTCATGGGCCTGACGTGGCTACTTGCTCGTAACAAAACGACGTACATTCCCACCGTTTCGGCCGTACTCCGAGCCATCATGTACAGCGCTCACCCTCCTCACGAGTCTACGTGTAGTCCGGACCAAGAGAACATGCCGCTAGCCGTCGACTCTTTACAGATGGAAAAGGCGCAGTCCTCATCTCCACCGTCCATTTCTTTGTTTCCGATTATACCCCTACTGATTTCTGTTTATTGGCTTGCTTGGTAG MSSFRLKMPPLTSTSICFIFLCIATNFHSSSAGFLVEPVSGQSQPLNPGQYSSPNTVPAFPVQTQMQICHLDLSDELFGGVREACGRDLDRSRCCPVLAAWLFAAHARAALKIAAPAPAAAADLPMMPDDSQKCVNSLQTSLLSRNIRIPQPNASCDAVLCFCGIRLHQISSLSCPAAFNVSGGGNGGYRNATPTAAVRNLEKNCRNSSYSGCTKCLGALQKFYRVTGTKKNATNDRASKMFNRDCQLMGLTWLLARNKTTYIPTVSAVLRAIMYSAHPPHESTCSPDQENMPLAVDSLQMEKAQSSSPPSISLFPIIPLLISVYWLAW Homology
BLAST of CmUC02G027220 vs. NCBI nr
Match: XP_008455363.1 (PREDICTED: uncharacterized GPI-anchored protein At4g28100-like [Cucumis melo] >KAA0031608.1 putative GPI-anchored protein [Cucumis melo var. makuwa] >TYK07060.1 putative GPI-anchored protein [Cucumis melo var. makuwa]) HSP 1 Score: 621.7 bits (1602), Expect = 3.6e-174 Identity = 316/330 (95.76%), Postives = 318/330 (96.36%), Query Frame = 0
BLAST of CmUC02G027220 vs. NCBI nr
Match: XP_038886941.1 (uncharacterized GPI-anchored protein At4g28100-like [Benincasa hispida]) HSP 1 Score: 619.8 bits (1597), Expect = 1.4e-173 Identity = 312/329 (94.83%), Postives = 315/329 (95.74%), Query Frame = 0
BLAST of CmUC02G027220 vs. NCBI nr
Match: XP_004136804.1 (uncharacterized GPI-anchored protein At4g28100 [Cucumis sativus] >KGN43572.1 hypothetical protein Csa_020440 [Cucumis sativus]) HSP 1 Score: 617.8 bits (1592), Expect = 5.2e-173 Identity = 310/329 (94.22%), Postives = 317/329 (96.35%), Query Frame = 0
BLAST of CmUC02G027220 vs. NCBI nr
Match: XP_022969178.1 (uncharacterized GPI-anchored protein At4g28100-like [Cucurbita maxima]) HSP 1 Score: 580.5 bits (1495), Expect = 9.3e-162 Identity = 293/324 (90.43%), Postives = 302/324 (93.21%), Query Frame = 0
BLAST of CmUC02G027220 vs. NCBI nr
Match: XP_022952077.1 (uncharacterized GPI-anchored protein At4g28100-like [Cucurbita moschata]) HSP 1 Score: 578.6 bits (1490), Expect = 3.5e-161 Identity = 292/324 (90.12%), Postives = 301/324 (92.90%), Query Frame = 0
BLAST of CmUC02G027220 vs. ExPASy Swiss-Prot
Match: Q9SUC9 (Uncharacterized GPI-anchored protein At4g28100 OS=Arabidopsis thaliana OX=3702 GN=At4g28100 PE=2 SV=1) HSP 1 Score: 403.7 bits (1036), Expect = 2.0e-111 Identity = 207/316 (65.51%), Postives = 247/316 (78.16%), Query Frame = 0
BLAST of CmUC02G027220 vs. ExPASy TrEMBL
Match: A0A5A7SLX1 (Putative GPI-anchored protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003780 PE=4 SV=1) HSP 1 Score: 621.7 bits (1602), Expect = 1.8e-174 Identity = 316/330 (95.76%), Postives = 318/330 (96.36%), Query Frame = 0
BLAST of CmUC02G027220 vs. ExPASy TrEMBL
Match: A0A1S3C1G3 (uncharacterized GPI-anchored protein At4g28100-like OS=Cucumis melo OX=3656 GN=LOC103495549 PE=4 SV=1) HSP 1 Score: 621.7 bits (1602), Expect = 1.8e-174 Identity = 316/330 (95.76%), Postives = 318/330 (96.36%), Query Frame = 0
BLAST of CmUC02G027220 vs. ExPASy TrEMBL
Match: A0A0A0K5M9 (SPARK domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G046110 PE=4 SV=1) HSP 1 Score: 617.8 bits (1592), Expect = 2.5e-173 Identity = 310/329 (94.22%), Postives = 317/329 (96.35%), Query Frame = 0
BLAST of CmUC02G027220 vs. ExPASy TrEMBL
Match: A0A6J1I086 (uncharacterized GPI-anchored protein At4g28100-like OS=Cucurbita maxima OX=3661 GN=LOC111468254 PE=4 SV=1) HSP 1 Score: 580.5 bits (1495), Expect = 4.5e-162 Identity = 293/324 (90.43%), Postives = 302/324 (93.21%), Query Frame = 0
BLAST of CmUC02G027220 vs. ExPASy TrEMBL
Match: A0A6J1GJF3 (uncharacterized GPI-anchored protein At4g28100-like OS=Cucurbita moschata OX=3662 GN=LOC111454840 PE=4 SV=1) HSP 1 Score: 578.6 bits (1490), Expect = 1.7e-161 Identity = 292/324 (90.12%), Postives = 301/324 (92.90%), Query Frame = 0
BLAST of CmUC02G027220 vs. TAIR 10
Match: AT4G28100.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 403.7 bits (1036), Expect = 1.4e-112 Identity = 207/316 (65.51%), Postives = 247/316 (78.16%), Query Frame = 0
BLAST of CmUC02G027220 vs. TAIR 10
Match: AT3G18050.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28100.1); Has 67 Blast hits to 66 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 198.7 bits (504), Expect = 7.1e-51 Identity = 127/329 (38.60%), Postives = 184/329 (55.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|