CmUC01G023360 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC01G023360
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Transcription factor bHLH35-like protein
Location	CmU531Chr01: 35110148 .. 35111012 (+)
RNA-Seq Expression	CmUC01G023360
Synteny	CmUC01G023360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAGAGCAAGTTGAAGCTGAGAGACAAACAGAGAGACAGAAATGGTTTCTACACTACAAAAGAGATTCGACTCACGCAACAAGCTACGCCTTGCTCGATCTCTGGCCACCTATGAATCCTCCGTAATTCCTAAAACATTCTGTTTTTGTTATGTGTTTTCTATTCTTTGTTTAGTCACTTCATTTTGTTTGAGCCATTAATAAATAATAATAATAATAATCAAGTCCTCTGTTTATGCAGGGAAGACAAAGGTGTGTGTTCTGGAATGCTGTTCTCTTCATTCATAAGCTTAAACTCAAGCTGGAAGCAATTGAGAGAGAGTATTCAAATCTATTGGCCATGAAAACAGAATACTTGAACTCAATAAAGCAATTTCATTCCCCCAAGGTCCTTTTCCCCCCTCTCTTTTAACAATTCAAATTCTTCCTAATATTCAATATGTATTTAGATATCATCTGCTAAACTGAAATTTAATGTTTGCATAAAAGCAGGAAGTGAAAGTTGAGAAGAACGGAGAGGAGTTTAGAGTGAAAGTGAAATGTGAAAAGGGAGGGGACAGATTGGTTTCAGTATTAGAGGCATTTGAGAAAATGGGTCTAAATGTTTTGGAAGCTAGAGTTTCATGTACTGAATGTTTTTGTATGGAGGCCATTGCTGTAGCCGAAGATGATCAATTGATTAATGTCAGTGATATTACTGAAGCTATTAATGTAGCCATTGATGGCAAATTATCAGCTGCAAATCAGCATCACAAAGACAATCCTCAGAATGATGCTGAAATTTAGCCACTTCCTAACCTATGAATTCAATGAAAATGTTTCTTGCTATTCCATTCTCTTGTATTTTTCTTTCTAATTCAAATTGG

mRNA sequence

GGAGAGCAAGTTGAAGCTGAGAGACAAACAGAGAGACAGAAATGGTTTCTACACTACAAAAGAGATTCGACTCACGCAACAAGCTACGCCTTGCTCGATCTCTGGCCACCTATGAATCCTCCGGAAGACAAAGGTGTGTGTTCTGGAATGCTGTTCTCTTCATTCATAAGCTTAAACTCAAGCTGGAAGCAATTGAGAGAGAGTATTCAAATCTATTGGCCATGAAAACAGAATACTTGAACTCAATAAAGCAATTTCATTCCCCCAAGGAAGTGAAAGTTGAGAAGAACGGAGAGGAGTTTAGAGTGAAAGTGAAATGTGAAAAGGGAGGGGACAGATTGGTTTCAGTATTAGAGGCATTTGAGAAAATGGGTCTAAATGTTTTGGAAGCTAGAGTTTCATGTACTGAATGTTTTTGTATGGAGGCCATTGCTGTAGCCGAAGATGATCAATTGATTAATGTCAGTGATATTACTGAAGCTATTAATGTAGCCATTGATGGCAAATTATCAGCTGCAAATCAGCATCACAAAGACAATCCTCAGAATGATGCTGAAATTTAGCCACTTCCTAACCTATGAATTCAATGAAAATGTTTCTTGCTATTCCATTCTCTTGTATTTTTCTTTCTAATTCAAATTGG

Coding sequence (CDS)

ATGGTTTCTACACTACAAAAGAGATTCGACTCACGCAACAAGCTACGCCTTGCTCGATCTCTGGCCACCTATGAATCCTCCGGAAGACAAAGGTGTGTGTTCTGGAATGCTGTTCTCTTCATTCATAAGCTTAAACTCAAGCTGGAAGCAATTGAGAGAGAGTATTCAAATCTATTGGCCATGAAAACAGAATACTTGAACTCAATAAAGCAATTTCATTCCCCCAAGGAAGTGAAAGTTGAGAAGAACGGAGAGGAGTTTAGAGTGAAAGTGAAATGTGAAAAGGGAGGGGACAGATTGGTTTCAGTATTAGAGGCATTTGAGAAAATGGGTCTAAATGTTTTGGAAGCTAGAGTTTCATGTACTGAATGTTTTTGTATGGAGGCCATTGCTGTAGCCGAAGATGATCAATTGATTAATGTCAGTGATATTACTGAAGCTATTAATGTAGCCATTGATGGCAAATTATCAGCTGCAAATCAGCATCACAAAGACAATCCTCAGAATGATGCTGAAATTTAG

Protein sequence

MVSTLQKRFDSRNKLRLARSLATYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLAMKTEYLNSIKQFHSPKEVKVEKNGEEFRVKVKCEKGGDRLVSVLEAFEKMGLNVLEARVSCTECFCMEAIAVAEDDQLINVSDITEAINVAIDGKLSAANQHHKDNPQNDAEI

Homology

[Close]

BLAST of CmUC01G023360 vs. NCBI nr
Match: XP_038893157.1 (uncharacterized protein LOC120082020 [Benincasa hispida])

HSP 1 Score: 308.1 bits (788), Expect = 4.7e-80
Identity = 157/173 (90.75%), Postives = 166/173 (95.95%), Query Frame = 0


Query: 1   MVSTLQKRFDSRNKLRLARSLATYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLA 60
           MVSTLQKRFDSRNKLRL RSLATYESS +QRC+FWNAVLFIHKLKLKLEAIEREYSNLLA
Sbjct: 1   MVSTLQKRFDSRNKLRLVRSLATYESSAKQRCMFWNAVLFIHKLKLKLEAIEREYSNLLA 60

Query: 61  MKTEYLNSIKQFHSPKEVKVEKNGEEFRVKVKCEKGGDRLVSVLEAFEKMGLNVLEARVS 120
           MK EYLNSIKQFHSPKEVKVEKNGEEF+VKV+CEKGGDRLVSVLEAFEKMGLNV+EARVS
Sbjct: 61  MKREYLNSIKQFHSPKEVKVEKNGEEFKVKVRCEKGGDRLVSVLEAFEKMGLNVVEARVS 120

Query: 121 CTECFCMEAIAVAEDDQLINVSDITEAINVAIDGKLSAANQHHKDNPQNDAEI 174
           CTECFCMEAIAVAE+ +L+NVSDITEAINVAIDGKL A NQHHKD P+NDAEI
Sbjct: 121 CTECFCMEAIAVAENHRLLNVSDITEAINVAIDGKLLAGNQHHKDIPENDAEI 173

[Close]

BLAST of CmUC01G023360 vs. NCBI nr
Match: XP_008439723.1 (PREDICTED: uncharacterized protein LOC103484437 [Cucumis melo] >ADN34030.1 hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 292.7 bits (748), Expect = 2.0e-75
Identity = 153/174 (87.93%), Postives = 160/174 (91.95%), Query Frame = 0


Query: 1   MVSTLQKRFDSRNKLRLARSLATYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLA 60
           MVSTLQKRFDSRNKLRL RSL TYESSGRQ CVFWNAVLFIHKLKLKLEAIEREYSNLL 
Sbjct: 1   MVSTLQKRFDSRNKLRLVRSLPTYESSGRQTCVFWNAVLFIHKLKLKLEAIEREYSNLLD 60

Query: 61  MKTEYLNSIKQFHSPKEVKVEKNGEEFRVKVKCEKGGDRLVSVLEAFEKMGLNVLEARVS 120
           MK EYLNSIKQFHS KEVKVEKNGEEFRVKV+CEKGGDRLVSVLEAFEKMGLNV+EARVS
Sbjct: 61  MKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRLVSVLEAFEKMGLNVVEARVS 120

Query: 121 CTECFCMEAIAVAED-DQLINVSDITEAINVAIDGKLSAANQHHKDNPQNDAEI 174
           CTECFCMEAIAVAED  QL+N+SDIT+AINVAID KL A NQHH D P NDA++
Sbjct: 121 CTECFCMEAIAVAEDHHQLLNLSDITDAINVAIDPKLLAPNQHHNDIPHNDAQL 174

[Close]

BLAST of CmUC01G023360 vs. NCBI nr
Match: KAA0052608.1 (uncharacterized protein E6C27_scaffold120G002160 [Cucumis melo var. makuwa] >TYK13219.1 uncharacterized protein E5676_scaffold255G008340 [Cucumis melo var. makuwa])

HSP 1 Score: 292.7 bits (748), Expect = 2.0e-75
Identity = 153/174 (87.93%), Postives = 160/174 (91.95%), Query Frame = 0


Query: 1   MVSTLQKRFDSRNKLRLARSLATYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLA 60
           MVSTLQKRFDSRNKLRL RSL TYESSGRQ CVFWNAVLFIHKLKLKLEAIEREYSNLL 
Sbjct: 1   MVSTLQKRFDSRNKLRLVRSLPTYESSGRQTCVFWNAVLFIHKLKLKLEAIEREYSNLLN 60

Query: 61  MKTEYLNSIKQFHSPKEVKVEKNGEEFRVKVKCEKGGDRLVSVLEAFEKMGLNVLEARVS 120
           MK EYLNSIKQFHS KEVKVEKNGEEFRVKV+CEKGGDRLVSVLEAFEKMGLNV+EARVS
Sbjct: 61  MKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRLVSVLEAFEKMGLNVVEARVS 120

Query: 121 CTECFCMEAIAVAED-DQLINVSDITEAINVAIDGKLSAANQHHKDNPQNDAEI 174
           CTECFCMEAIAVAED  QL+N+SDIT+AINVAID KL A NQHH D P NDA++
Sbjct: 121 CTECFCMEAIAVAEDHHQLLNLSDITDAINVAIDPKLLAPNQHHNDIPHNDAQL 174

[Close]

BLAST of CmUC01G023360 vs. NCBI nr
Match: XP_004134653.1 (uncharacterized protein LOC101213083 [Cucumis sativus] >KGN49320.1 hypothetical protein Csa_003445 [Cucumis sativus])

HSP 1 Score: 291.2 bits (744), Expect = 5.9e-75
Identity = 154/175 (88.00%), Postives = 161/175 (92.00%), Query Frame = 0


Query: 1   MVSTLQKRFDSRNKLRLARSLATYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLA 60
           MVSTLQKRFDSRNKLRL RSL TYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLL 
Sbjct: 1   MVSTLQKRFDSRNKLRLVRSLPTYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLD 60

Query: 61  MKTEYLNSIKQFHSPKEVKVEKNGEEFRVKVKCEKGGDRLVSVLEAFEKMGLNVLEARVS 120
           MK EYLNSIKQFHS KEVKVEKNGEEFRVKV+CEKGGDRLVSVLEAFEKMGLNV+EARVS
Sbjct: 61  MKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRLVSVLEAFEKMGLNVVEARVS 120

Query: 121 CTECFCMEAIAVAED-DQLINVSDITEAINVAIDGKLSAANQHHKDN-PQNDAEI 174
           CTECFCMEA AVAED  QL+N+SDITEAINVAID KL A NQHH D+ P NDA++
Sbjct: 121 CTECFCMEATAVAEDHHQLLNLSDITEAINVAIDPKLLAPNQHHNDSIPHNDAQL 175

[Close]

BLAST of CmUC01G023360 vs. NCBI nr
Match: XP_023544520.1 (uncharacterized protein LOC111804071 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 266.2 bits (679), Expect = 2.0e-67
Identity = 135/173 (78.03%), Postives = 153/173 (88.44%), Query Frame = 0


Query: 1   MVSTLQKRFDSRNKLRLARSLATYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLA 60
           MVST QKRFDSR KLRL RSL TY+SSG+Q   FWNAVLF+HKLKLKLEAIEREYSNLL+
Sbjct: 1   MVSTFQKRFDSRKKLRLVRSLPTYQSSGKQSSEFWNAVLFLHKLKLKLEAIEREYSNLLS 60

Query: 61  MKTEYLNSIKQFHSPKEVKVEKNGEEFRVKVKCEKGGDRLVSVLEAFEKMGLNVLEARVS 120
           MK EYLNS+KQ H+PKEVKVEK GEEFRVKV+CEKGGDRLV+VLEAF+KMGLNVL+A+VS
Sbjct: 61  MKREYLNSVKQIHAPKEVKVEKVGEEFRVKVRCEKGGDRLVTVLEAFDKMGLNVLQAKVS 120

Query: 121 CTECFCMEAIAVAEDDQLINVSDITEAINVAIDGKLSAANQHHKDNPQNDAEI 174
           C+ECF MEAIAVAED+Q +N+SDITEAIN AI+GK  AANQ  K+ P+ D EI
Sbjct: 121 CSECFSMEAIAVAEDEQSLNISDITEAINAAIEGKSLAANQQQKETPEKDDEI 173

[Close]

BLAST of CmUC01G023360 vs. ExPASy TrEMBL
Match: A0A5A7UBN8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008340 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 9.8e-76
Identity = 153/174 (87.93%), Postives = 160/174 (91.95%), Query Frame = 0


Query: 1   MVSTLQKRFDSRNKLRLARSLATYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLA 60
           MVSTLQKRFDSRNKLRL RSL TYESSGRQ CVFWNAVLFIHKLKLKLEAIEREYSNLL 
Sbjct: 1   MVSTLQKRFDSRNKLRLVRSLPTYESSGRQTCVFWNAVLFIHKLKLKLEAIEREYSNLLN 60

Query: 61  MKTEYLNSIKQFHSPKEVKVEKNGEEFRVKVKCEKGGDRLVSVLEAFEKMGLNVLEARVS 120
           MK EYLNSIKQFHS KEVKVEKNGEEFRVKV+CEKGGDRLVSVLEAFEKMGLNV+EARVS
Sbjct: 61  MKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRLVSVLEAFEKMGLNVVEARVS 120

Query: 121 CTECFCMEAIAVAED-DQLINVSDITEAINVAIDGKLSAANQHHKDNPQNDAEI 174
           CTECFCMEAIAVAED  QL+N+SDIT+AINVAID KL A NQHH D P NDA++
Sbjct: 121 CTECFCMEAIAVAEDHHQLLNLSDITDAINVAIDPKLLAPNQHHNDIPHNDAQL 174

[Close]

BLAST of CmUC01G023360 vs. ExPASy TrEMBL
Match: E5GC31 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 9.8e-76
Identity = 153/174 (87.93%), Postives = 160/174 (91.95%), Query Frame = 0


Query: 1   MVSTLQKRFDSRNKLRLARSLATYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLA 60
           MVSTLQKRFDSRNKLRL RSL TYESSGRQ CVFWNAVLFIHKLKLKLEAIEREYSNLL 
Sbjct: 1   MVSTLQKRFDSRNKLRLVRSLPTYESSGRQTCVFWNAVLFIHKLKLKLEAIEREYSNLLD 60

Query: 61  MKTEYLNSIKQFHSPKEVKVEKNGEEFRVKVKCEKGGDRLVSVLEAFEKMGLNVLEARVS 120
           MK EYLNSIKQFHS KEVKVEKNGEEFRVKV+CEKGGDRLVSVLEAFEKMGLNV+EARVS
Sbjct: 61  MKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRLVSVLEAFEKMGLNVVEARVS 120

Query: 121 CTECFCMEAIAVAED-DQLINVSDITEAINVAIDGKLSAANQHHKDNPQNDAEI 174
           CTECFCMEAIAVAED  QL+N+SDIT+AINVAID KL A NQHH D P NDA++
Sbjct: 121 CTECFCMEAIAVAEDHHQLLNLSDITDAINVAIDPKLLAPNQHHNDIPHNDAQL 174

[Close]

BLAST of CmUC01G023360 vs. ExPASy TrEMBL
Match: A0A1S3B049 (uncharacterized protein LOC103484437 OS=Cucumis melo OX=3656 GN=LOC103484437 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 9.8e-76
Identity = 153/174 (87.93%), Postives = 160/174 (91.95%), Query Frame = 0


Query: 1   MVSTLQKRFDSRNKLRLARSLATYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLA 60
           MVSTLQKRFDSRNKLRL RSL TYESSGRQ CVFWNAVLFIHKLKLKLEAIEREYSNLL 
Sbjct: 1   MVSTLQKRFDSRNKLRLVRSLPTYESSGRQTCVFWNAVLFIHKLKLKLEAIEREYSNLLD 60

Query: 61  MKTEYLNSIKQFHSPKEVKVEKNGEEFRVKVKCEKGGDRLVSVLEAFEKMGLNVLEARVS 120
           MK EYLNSIKQFHS KEVKVEKNGEEFRVKV+CEKGGDRLVSVLEAFEKMGLNV+EARVS
Sbjct: 61  MKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRLVSVLEAFEKMGLNVVEARVS 120

Query: 121 CTECFCMEAIAVAED-DQLINVSDITEAINVAIDGKLSAANQHHKDNPQNDAEI 174
           CTECFCMEAIAVAED  QL+N+SDIT+AINVAID KL A NQHH D P NDA++
Sbjct: 121 CTECFCMEAIAVAEDHHQLLNLSDITDAINVAIDPKLLAPNQHHNDIPHNDAQL 174

[Close]

BLAST of CmUC01G023360 vs. ExPASy TrEMBL
Match: A0A0A0KHW9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519710 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 2.9e-75
Identity = 154/175 (88.00%), Postives = 161/175 (92.00%), Query Frame = 0


Query: 1   MVSTLQKRFDSRNKLRLARSLATYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLA 60
           MVSTLQKRFDSRNKLRL RSL TYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLL 
Sbjct: 1   MVSTLQKRFDSRNKLRLVRSLPTYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLD 60

Query: 61  MKTEYLNSIKQFHSPKEVKVEKNGEEFRVKVKCEKGGDRLVSVLEAFEKMGLNVLEARVS 120
           MK EYLNSIKQFHS KEVKVEKNGEEFRVKV+CEKGGDRLVSVLEAFEKMGLNV+EARVS
Sbjct: 61  MKREYLNSIKQFHSSKEVKVEKNGEEFRVKVRCEKGGDRLVSVLEAFEKMGLNVVEARVS 120

Query: 121 CTECFCMEAIAVAED-DQLINVSDITEAINVAIDGKLSAANQHHKDN-PQNDAEI 174
           CTECFCMEA AVAED  QL+N+SDITEAINVAID KL A NQHH D+ P NDA++
Sbjct: 121 CTECFCMEATAVAEDHHQLLNLSDITEAINVAIDPKLLAPNQHHNDSIPHNDAQL 175

[Close]

BLAST of CmUC01G023360 vs. ExPASy TrEMBL
Match: A0A6J1IR65 (uncharacterized protein LOC111478631 OS=Cucurbita maxima OX=3661 GN=LOC111478631 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.3e-67
Identity = 135/173 (78.03%), Postives = 152/173 (87.86%), Query Frame = 0


Query: 1   MVSTLQKRFDSRNKLRLARSLATYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLA 60
           MVST QKRFDSR KLRL RSL TY+SSG+Q   FWNAVLF+HKLKLKLEAIEREYSNLL+
Sbjct: 1   MVSTFQKRFDSRKKLRLVRSLPTYQSSGKQSSEFWNAVLFLHKLKLKLEAIEREYSNLLS 60

Query: 61  MKTEYLNSIKQFHSPKEVKVEKNGEEFRVKVKCEKGGDRLVSVLEAFEKMGLNVLEARVS 120
           MK EYLNS+KQ H+PKEVKVEK GEEFRVKV+CEKGGDRLV+VLEAF+KMGLNVL+A+VS
Sbjct: 61  MKREYLNSVKQIHAPKEVKVEKVGEEFRVKVRCEKGGDRLVTVLEAFDKMGLNVLQAKVS 120

Query: 121 CTECFCMEAIAVAEDDQLINVSDITEAINVAIDGKLSAANQHHKDNPQNDAEI 174
           C+ECF MEAIAVAED+Q +N+ DITEAIN AIDGK  AANQ  K+ P+ D EI
Sbjct: 121 CSECFSMEAIAVAEDEQSLNICDITEAINAAIDGKSLAANQQQKETPEKDDEI 173

[Close]

BLAST of CmUC01G023360 vs. TAIR 10
Match: AT1G29270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40435.1); Has 98 Blast hits to 98 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 104.8 bits (260), Expect = 7.3e-23
Identity = 66/154 (42.86%), Postives = 98/154 (63.64%), Query Frame = 0


Query: 1   MVSTLQKRFDSRNKLRLARSLATYE-SSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLL 60
           MV++ QK+  S+ K    ++L  ++ S   Q  V   A+L+I  LKL++EA++REY +L 
Sbjct: 1   MVASEQKKRASQGKPHFLKNLTHFKFSIHEQSMVIREALLYIAMLKLEIEALQREYEDLK 60

Query: 61  AMKTEYLNSIKQFHSPKEVKVEKNGEEFRVKVKCEKGGDRLVSVLEAFEKMGLNVLEARV 120
             K E L      H  +EVKVEK GE F+VK+K  +G + LV++LEAFE+MGLNV +AR 
Sbjct: 61  ITKKESL------HQFQEVKVEKIGEMFQVKIKSPRGENNLVNILEAFEEMGLNVAQARA 120

Query: 121 SCTECFCMEAIAVAED-DQLINVSDITEAINVAI 153
           SC + F MEAI   +  D+L +V D+T+ +  A+
Sbjct: 121 SCLDSFAMEAIVAPQSKDKLCSVDDLTQTLVKAL 148

[Close]

BLAST of CmUC01G023360 vs. TAIR 10
Match: AT2G40435.1 (BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 60.5 bits (145), Expect = 1.6e-09
Identity = 53/154 (34.42%), Postives = 78/154 (50.65%), Query Frame = 0


Query: 1   MVSTLQKRFDSRNKLRLARSLATYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLLA 60
           MVS  QKR   + K +L RS+ T   +     +  +A  +I KLK K+E   ++ +    
Sbjct: 1   MVSREQKRGSLQEKFQLLRSI-TNSHAENDTSIIMDASKYIQKLKQKVERFNQDPT---- 60

Query: 61  MKTEYLNSIKQFHSPKEVKVEKNGEEFRVKVKCEKG-GDRLVSVLEAFEKMGLNVLEARV 120
              E  +S         V VE   + F + V   K     LVSVLEAFE +GLNVLEAR 
Sbjct: 61  --AEQSSSEPTDPKTPMVTVETLDKGFMINVFSGKNQPGMLVSVLEAFEDIGLNVLEARA 120

Query: 121 SCTECFCMEAIAVA-EDDQLINVSDITEAINVAI 153
           SCT+ F + A+ +  ED + ++   + +A+  AI
Sbjct: 121 SCTDSFSLHAMGLENEDGENMDAEAVKQAVTDAI 147

[Close]

BLAST of CmUC01G023360 vs. TAIR 10
Match: AT3G56220.1 (transcription regulators )

HSP 1 Score: 57.0 bits (136), Expect = 1.7e-08
Identity = 55/157 (35.03%), Postives = 77/157 (49.04%), Query Frame = 0


Query: 1   MVSTLQKRFDS-RNKLRLARSLATYESSGRQRCVFWNAVLFIHKLKLKLEAIEREYSNLL 60
           MVS   KR  S R K  L RS+ T   +  +  +  +A  +I KLK K+E I        
Sbjct: 1   MVSREHKRGSSLREKFHLLRSI-TDSHAESETSIIVDASKYIKKLKQKVEKINN------ 60

Query: 61  AMKTEYLNSIKQFHSPKE-VKVEKNGEEFRVKVKCEKG-GDRLVSVLEAFEKMGLNVLEA 120
              T    S ++   P   V VE   + F +KV   K     LV VLE FE +GL+V+EA
Sbjct: 61  --ATTSEQSFRESSDPNPMVTVETLEKGFMIKVMSRKNEAGMLVCVLETFEDLGLDVVEA 120

Query: 121 RVSCTECFCMEAIAVA--EDDQLINVSDITEAINVAI 153
           RVSCT+ F + AI  +  +D   I+   + +A+  AI
Sbjct: 121 RVSCTDTFSLHAIGSSNNDDGDCIDAEAVKQAVAEAI 148

The following BLAST results are available for this feature:

BLAST of CmUC01G023360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893157.1	4.7e-80	90.75	uncharacterized protein LOC120082020 [Benincasa hispida]	[more]
XP_008439723.1	2.0e-75	87.93	PREDICTED: uncharacterized protein LOC103484437 [Cucumis melo] >ADN34030.1 hypot...	[more]
KAA0052608.1	2.0e-75	87.93	uncharacterized protein E6C27_scaffold120G002160 [Cucumis melo var. makuwa] >TYK...	[more]
XP_004134653.1	5.9e-75	88.00	uncharacterized protein LOC101213083 [Cucumis sativus] >KGN49320.1 hypothetical ...	[more]
XP_023544520.1	2.0e-67	78.03	uncharacterized protein LOC111804071 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmUC01G023360 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC01G023360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UBN8	9.8e-76	87.93	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
E5GC31	9.8e-76	87.93	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3B049	9.8e-76	87.93	uncharacterized protein LOC103484437 OS=Cucumis melo OX=3656 GN=LOC103484437 PE=...	[more]
A0A0A0KHW9	2.9e-75	88.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519710 PE=4 SV=1	[more]
A0A6J1IR65	1.3e-67	78.03	uncharacterized protein LOC111478631 OS=Cucurbita maxima OX=3661 GN=LOC111478631...	[more]

BLAST of CmUC01G023360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29270.1	7.3e-23	42.86	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G40435.1	1.6e-09	34.42	BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G5...	[more]
AT3G56220.1	1.7e-08	35.03	transcription regulators	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 41..61
None	No IPR available	PANTHER	PTHR31945:SF27	TRANSCRIPTION FACTOR BHLH35-LIKE PROTEIN	coord: 1..155
None	No IPR available	PANTHER	PTHR31945	TRANSCRIPTION FACTOR SCREAM2-RELATED	coord: 1..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC01G023360.1	CmUC01G023360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding