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CmUC01G022980 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGAATGGCGCACTCAGTCCAGCCCAATCTGAGCCGGTCACGTTTCGGGTTTAGTACTCGAATCTGCGTTCTCCGATTCAGTTTTCAGGCGGCCCTTTTGCGCCCGACAGTCGACGGGCCGCTCTTTCTCGCCCGCTTCACGACGATGATGTCAAAGCGGAGTTGGTGTTCAAATCGCAACAGACTGTTTGATAGAATTCCTCAGGTGCCTACTACACACGTTTGCTAGTTTCAGTTTCGACCTAAAGTTTACCCGGCATAAGCTCGGAACAGTGAGCTGGGTTTTCACAGCAAGGACCCCATTTCCTTGTTATCGTCGTTCTTCTTCCTCGTAGGTGAAAGCGTGAACGGGCGATGCGATCAATTGTTCCCCCAATTGATTATTGAATCTCACTTCTCCGCGATGCGAAGCTTTTCGTTACGAACATTGAGTACCACTGCTGGTTCTGTGAAAACTCTTCTCGCCAGTGCTTCGCCAGTGGTTCGGCAATCTTCTCGTTCTTATTTTGCTAATTTGAATCTTGAGAAACTGCAGAAGGAAGCTATTCCCCGTGATTTCCTCAAATGGTCTTCGCTTGGTTTCTTTCGGACTTCAAGATTCGCTACTGGGTTCGCCCCATTGCAACCAAAGCCGTTGGATTCGATCATTGATATGGAGAGGGCGAAAGATCGGTCACCCGAGGACCTCGCTTCCATCTGGGATGATGTAATGTTTCTTCTTATTCTTTATAAGTTTGTTTAAATTTTGCCCCAAAATTTGTTTCTGGCTGTAAGATTCTAAAATACTTTATAGTCGAACTGTGTAGTCTCTAGAATCGGTTAATTTGTTAGAAGAGATTGATGTGCGAGAAAAGACAGGTTTTATGAATGTGGGTACTCTGAAGCAACGTTTAAATTTTAAATCGGCGGAACATTTGTAGTTTGTTGTCACGAGTCAGAGGGCTCATTCTGAATTTAGTCACTTGCTCTTCATGAATTTCAGATGAAATGAATTTATACACCGCATGTTCAAACTATGCGCAAATTTCCCAGAATCTAGGACCGGGAGACAAGCATGTGTAGCTTTTAGAGCCGAGAAACAAAAGTGTTCCTCATGTTCCCTTTTGATGGATAGTCCATTTATTGGGACAATGACAGTGGCTTCGTAAATTAGTCTTCATTGAATTTTTTAATTTAAAAGTTCTTTGAGGATATTTTTTTTAACACAGTTGGGCATACTTCCAAACTCAAACCTTGGTTAAATGTTATCAATATCAGTAACTTGAGTGAAACCATGGATGATTTTATTGTTGTCCTTTTCCCTCATATATGCAATTATTCTCACTTTCTTTTCCTGGGTTCTGCTCTACCAGTATCATTTGGGAAGAGGACATATTGGGGTGTCGATGAAAGCTAAACTATATCATTTATTGGAACGACGAGCTGCCGATTGGTAACTATCAAACATTTTGTGAATCCTTCTTTGAGTCATTTTTCAGTATTTTGCTGTTCTAAGTATACCGAGTTCTTGCAGCCGATACTTTGTTATTCCTATGTGGCGTGGAAGTGGTTATACTACCATGTTTGTTCAAGGTTTGGTCTTTAACTCATGGCTTTGGCTTTAAGCTATCTGTTTATATAAATAGAAAGAAAAGATCCTTCCCTGCAAGTTATATAATTTGATGCCATTACTTAATCCTTTGATGTATTTTCCTTTCCTCCCTCTTTCTTTCTTTAATATAAATTAGAATAATATTCTAAGAAAAACTAAATATTCTTAGAAATTAGAATAACTCTTTGATGAATCATCCATCAATGGGTTTGTTATAGACTACAGTCAAATACAGGTGGTAGTTGGTACACCAAATGGATAGAGTTTAAATTTTTGAGTAAATGAAAACAATTCTCTTGAGCTATTAATAAACACTAGAATTTCTTAGAACATTTTGAGTATATAAGACATGAATTCATACTTATGTAAAGCCCGTCTCATGCAATGCAGATGCAAGCTCTCGATTGTCTAGAGCCTTTTAATTTTTATTTTTTCCTTTTGATGAGAAAAAAAGTACTTTCATTGAATAAACTGAGGTATAAAAGTAGAAGATAACCTATAAGCTTGAGTTTTTGGGTTATGATAAATATATTATATCAACACTCTAACAATCCCCATCACTTGTGGGCTTGAAAATTTATTGAAGGTCCAATCCAACAAGTGGAATTCAATATTAATTAAGGAGAAAAATGACTTTTCCAGGATTCAAACATAGAAAGTCTTTCTTTGATACTGTGAACTATGTTAGATCACTGATTAACCCAAAAGCTTAAGCTTATATGTATGGTAAATTTAATATCATATCAAACACTCTAACAATAAGATATTTGCAGCAAACAAACCAAAGCTTACAAAGGTCCTCAAATGCCAAAAATAAATATCATAATTGCAAAAGATTGTTGAGAGTCTGACTTTGGAGGAATAATCATAGTTAGGAGCTACCTCCCAGACATCTTCCACTCCTCTAAGATTCCTTGGTTCCTCTCTACCTAGTTTTTCCTCAAAATAGCCTTCAACTTCATCGGCTAGTAACATTTTACGTTTCTCCTGAAGCTTAACACACATTTGCAAGTTGTTGATTTTGTTGTATCGTTGGAGAAGAAAATCTGGAGAGGAAAAAAGAAAAATTAAAGGTAAATAAGACTTCTGAAAAGATAGGATAAACCAAGAAGCCTGACTTGTGAATTAGGTTCAGTCCATCTAGCTTTGGTGTTTCAAAGAAATCGGGTTTCCTCTACAACAATGAACTTCAGGTTGCTATGGATGAAACAGTCGCTCGTTCTGTCTCTGCTAGTTGTATGACTTTTAGTTTAGAAGTTTGAAGTCCTGCTTACTCAAAACGGTGATTGTGCTTGATAGTGCTGGAAAATTGTTGTAGAACGAGATCTTAAGTATATGTTGGGCTGTGGGATATGAAACATGGAATTTACTACTGCCAGTGATGCTTATAGTTCAATCCATTTTGCAGTACAAATGCCGCATATCCTTTTCACTGGCCTTGAAGATTACAAGGCAAGAGGAACTCAAGCAGCTCCCTACTTCACCGTGTCCTATTACAAAGAATTTGCAGAGAGCAAGGATTTGGTGCTTATTCGAGGTGATATTGTGTTTACAAGTAAGCTTACCGACCAAGAGGCAGAATGGCTTTTAGAGACTACCCAATCCTTCTATCTGAATGATGTTCGGTACAAGCTGGTTGAACGGTTCAACAGACAAACACGTGATTTTGAGTTTAAGGATGTCTTACAAGCACTGGAAATGCCCATTTTATGATTTATGGGGAACTTAGCAGGCAATGGTGCCCTCTAAAAGGTAATAATAAGAAATTTAGCAAAACATGACAAGCCTTTATAGGGCTATTATTTATAGTTCCCCATAACTTTGAATAGGTTGTTTTGATCTGTAGAGAGAATAATCAAATGCTTTATTCTCGGTGTGTTCGTATGATTGAGAAGTGTTCCCATGCAGAGAGAAAGTAAACCACCAATTAGTCAGAAATATTTATTTATGCCTCATCTCAAATAAAGGGAACACATAGTTCTTTTGCATCCTCGAGTTGACATTTCAATTCTTTTTTCTTTGTGGAAGTTGGGGAAGGAGTTATGAATGGAAAAATGAGTTCTTGCTGATTAGTTCAGGA ATGCGAATGGCGCACTCAGTCCAGCCCAATCTGAGCCGGTCACGTTTCGGGTTTAGTACTCGAATCTGCGTTCTCCGATTCAGTTTTCAGGCGGCCCTTTTGCGCCCGACAGTCGACGGGCCGCTCTTTCTCGCCCGCTTCACGACGATGATGTCAAAGCGGAGTTGGTGTTCAAATCGCAACAGACTGTTTGATAGAATTCCTCAGGACCCCATTTCCTTGTTATCGTCGTTCTTCTTCCTCGTAGGTGAAAGCGTGAACGGGCGATGCGATCAATTGTTCCCCCAATTGATTATTGAATCTCACTTCTCCGCGATGCGAAGCTTTTCGTTACGAACATTGAGTACCACTGCTGGTTCTGTGAAAACTCTTCTCGCCAGTGCTTCGCCAGTGGTTCGGCAATCTTCTCGTTCTTATTTTGCTAATTTGAATCTTGAGAAACTGCAGAAGGAAGCTATTCCCCGTGATTTCCTCAAATGGTCTTCGCTTGGTTTCTTTCGGACTTCAAGATTCGCTACTGGGTTCGCCCCATTGCAACCAAAGCCGTTGGATTCGATCATTGATATGGAGAGGGCGAAAGATCGGTCACCCGAGGACCTCGCTTCCATCTGGGATGATTATCATTTGGGAAGAGGACATATTGGGGTGTCGATGAAAGCTAAACTATATCATTTATTGGAACGACGAGCTGCCGATTGCCGATACTTTGTTATTCCTATGTGGCGTGGAAGTGGTTATACTACCATGTTTGTTCAAGTACAAATGCCGCATATCCTTTTCACTGGCCTTGAAGATTACAAGGCAAGAGGAACTCAAGCAGCTCCCTACTTCACCGTGTCCTATTACAAAGAATTTGCAGAGAGCAAGGATTTGGTGCTTATTCGAGGTGATATTGTGTTTACAAGTAAGCTTACCGACCAAGAGGCAGAATGGCTTTTAGAGACTACCCAATCCTTCTATCTGAATGATGTTCGGTACAAGCTGGTTGAACGGTTCAACAGACAAACACGTGATTTTGAGTTTAAGGATGTCTTACAAGCACTGGAAATGCCCATTTTATGATTTATGGGGAACTTAGCAGGCAATGGTGCCCTCTAAAAGGTAATAATAAGAAATTTAGCAAAACATGACAAGCCTTTATAGGGCTATTATTTATAGTTCCCCATAACTTTGAATAGGTTGTTTTGATCTGTAGAGAGAATAATCAAATGCTTTATTCTCGGTGTGTTCGTATGATTGAGAAGTGTTCCCATGCAGAGAGAAAGTAAACCACCAATTAGTCAGAAATATTTATTTATGCCTCATCTCAAATAAAGGGAACACATAGTTCTTTTGCATCCTCGAGTTGACATTTCAATTCTTTTTTCTTTGTGGAAGTTGGGGAAGGAGTTATGAATGGAAAAATGAGTTCTTGCTGATTAGTTCAGGA ATGCGAATGGCGCACTCAGTCCAGCCCAATCTGAGCCGGTCACGTTTCGGGTTTAGTACTCGAATCTGCGTTCTCCGATTCAGTTTTCAGGCGGCCCTTTTGCGCCCGACAGTCGACGGGCCGCTCTTTCTCGCCCGCTTCACGACGATGATGTCAAAGCGGAGTTGGTGTTCAAATCGCAACAGACTGTTTGATAGAATTCCTCAGGACCCCATTTCCTTGTTATCGTCGTTCTTCTTCCTCGTAGGTGAAAGCGTGAACGGGCGATGCGATCAATTGTTCCCCCAATTGATTATTGAATCTCACTTCTCCGCGATGCGAAGCTTTTCGTTACGAACATTGAGTACCACTGCTGGTTCTGTGAAAACTCTTCTCGCCAGTGCTTCGCCAGTGGTTCGGCAATCTTCTCGTTCTTATTTTGCTAATTTGAATCTTGAGAAACTGCAGAAGGAAGCTATTCCCCGTGATTTCCTCAAATGGTCTTCGCTTGGTTTCTTTCGGACTTCAAGATTCGCTACTGGGTTCGCCCCATTGCAACCAAAGCCGTTGGATTCGATCATTGATATGGAGAGGGCGAAAGATCGGTCACCCGAGGACCTCGCTTCCATCTGGGATGATTATCATTTGGGAAGAGGACATATTGGGGTGTCGATGAAAGCTAAACTATATCATTTATTGGAACGACGAGCTGCCGATTGCCGATACTTTGTTATTCCTATGTGGCGTGGAAGTGGTTATACTACCATGTTTGTTCAAGTACAAATGCCGCATATCCTTTTCACTGGCCTTGAAGATTACAAGGCAAGAGGAACTCAAGCAGCTCCCTACTTCACCGTGTCCTATTACAAAGAATTTGCAGAGAGCAAGGATTTGGTGCTTATTCGAGGTGATATTGTGTTTACAAGTAAGCTTACCGACCAAGAGGCAGAATGGCTTTTAGAGACTACCCAATCCTTCTATCTGAATGATGTTCGGTACAAGCTGGTTGAACGGTTCAACAGACAAACACGTGATTTTGAGTTTAAGGATGTCTTACAAGCACTGGAAATGCCCATTTTATGA MRMAHSVQPNLSRSRFGFSTRICVLRFSFQAALLRPTVDGPLFLARFTTMMSKRSWCSNRNRLFDRIPQDPISLLSSFFFLVGESVNGRCDQLFPQLIIESHFSAMRSFSLRTLSTTAGSVKTLLASASPVVRQSSRSYFANLNLEKLQKEAIPRDFLKWSSLGFFRTSRFATGFAPLQPKPLDSIIDMERAKDRSPEDLASIWDDYHLGRGHIGVSMKAKLYHLLERRAADCRYFVIPMWRGSGYTTMFVQVQMPHILFTGLEDYKARGTQAAPYFTVSYYKEFAESKDLVLIRGDIVFTSKLTDQEAEWLLETTQSFYLNDVRYKLVERFNRQTRDFEFKDVLQALEMPIL Homology
BLAST of CmUC01G022980 vs. NCBI nr
Match: XP_038883536.1 (ATP synthase mitochondrial F1 complex assembly factor 1 [Benincasa hispida]) HSP 1 Score: 474.2 bits (1219), Expect = 1.0e-129 Identity = 236/248 (95.16%), Postives = 242/248 (97.58%), Query Frame = 0
BLAST of CmUC01G022980 vs. NCBI nr
Match: XP_008439782.1 (PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 1 [Cucumis melo]) HSP 1 Score: 464.9 bits (1195), Expect = 6.1e-127 Identity = 229/248 (92.34%), Postives = 239/248 (96.37%), Query Frame = 0
BLAST of CmUC01G022980 vs. NCBI nr
Match: KAA0052644.1 (ATP synthase mitochondrial F1 complex assembly factor 1 [Cucumis melo var. makuwa] >TYK13182.1 ATP synthase mitochondrial F1 complex assembly factor 1 [Cucumis melo var. makuwa]) HSP 1 Score: 462.6 bits (1189), Expect = 3.0e-126 Identity = 228/248 (91.94%), Postives = 239/248 (96.37%), Query Frame = 0
BLAST of CmUC01G022980 vs. NCBI nr
Match: XP_004134937.1 (ATP synthase mitochondrial F1 complex assembly factor 1 [Cucumis sativus] >KGN49278.1 hypothetical protein Csa_003090 [Cucumis sativus]) HSP 1 Score: 459.1 bits (1180), Expect = 3.3e-125 Identity = 226/248 (91.13%), Postives = 238/248 (95.97%), Query Frame = 0
BLAST of CmUC01G022980 vs. NCBI nr
Match: XP_022978750.1 (ATP synthase mitochondrial F1 complex assembly factor 1 [Cucurbita maxima]) HSP 1 Score: 451.1 bits (1159), Expect = 9.1e-123 Identity = 222/248 (89.52%), Postives = 235/248 (94.76%), Query Frame = 0
BLAST of CmUC01G022980 vs. ExPASy Swiss-Prot
Match: Q66JD1 (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Xenopus tropicalis OX=8364 GN=atpaf1 PE=2 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.3e-15 Identity = 60/207 (28.99%), Postives = 99/207 (47.83%), Query Frame = 0
BLAST of CmUC01G022980 vs. ExPASy Swiss-Prot
Match: Q5TC12 (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Homo sapiens OX=9606 GN=ATPAF1 PE=1 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 1.1e-14 Identity = 51/171 (29.82%), Postives = 83/171 (48.54%), Query Frame = 0
BLAST of CmUC01G022980 vs. ExPASy Swiss-Prot
Match: Q811I0 (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Mus musculus OX=10090 GN=Atpaf1 PE=1 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 4.2e-14 Identity = 50/171 (29.24%), Postives = 82/171 (47.95%), Query Frame = 0
BLAST of CmUC01G022980 vs. ExPASy Swiss-Prot
Match: P87127 (Protein atp11, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=atp11 PE=3 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 1.4e-09 Identity = 47/181 (25.97%), Postives = 85/181 (46.96%), Query Frame = 0
BLAST of CmUC01G022980 vs. ExPASy TrEMBL
Match: A0A1S3AZK5 (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Cucumis melo OX=3656 GN=LOC103484474 PE=3 SV=1) HSP 1 Score: 464.9 bits (1195), Expect = 2.9e-127 Identity = 229/248 (92.34%), Postives = 239/248 (96.37%), Query Frame = 0
BLAST of CmUC01G022980 vs. ExPASy TrEMBL
Match: A0A5A7UBA1 (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007940 PE=3 SV=1) HSP 1 Score: 462.6 bits (1189), Expect = 1.5e-126 Identity = 228/248 (91.94%), Postives = 239/248 (96.37%), Query Frame = 0
BLAST of CmUC01G022980 vs. ExPASy TrEMBL
Match: A0A0A0KI74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518330 PE=3 SV=1) HSP 1 Score: 459.1 bits (1180), Expect = 1.6e-125 Identity = 226/248 (91.13%), Postives = 238/248 (95.97%), Query Frame = 0
BLAST of CmUC01G022980 vs. ExPASy TrEMBL
Match: A0A6J1IR42 (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Cucurbita maxima OX=3661 GN=LOC111478614 PE=3 SV=1) HSP 1 Score: 451.1 bits (1159), Expect = 4.4e-123 Identity = 222/248 (89.52%), Postives = 235/248 (94.76%), Query Frame = 0
BLAST of CmUC01G022980 vs. ExPASy TrEMBL
Match: A0A6J1EJC6 (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Cucurbita moschata OX=3662 GN=LOC111433127 PE=3 SV=1) HSP 1 Score: 450.7 bits (1158), Expect = 5.7e-123 Identity = 222/248 (89.52%), Postives = 235/248 (94.76%), Query Frame = 0
BLAST of CmUC01G022980 vs. TAIR 10
Match: AT2G34050.1 (INVOLVED IN: protein complex assembly; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATP11 (InterPro:IPR010591); Has 304 Blast hits to 304 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 101; Fungi - 112; Plants - 39; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). ) HSP 1 Score: 328.6 bits (841), Expect = 6.3e-90 Identity = 147/207 (71.01%), Postives = 182/207 (87.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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