CmUC01G021470 (gene) Watermelon (USVL531) v1

Overview
NameCmUC01G021470
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionPatatin
LocationCmU531Chr01: 33797171 .. 33797518 (-)
RNA-Seq ExpressionCmUC01G021470
SyntenyCmUC01G021470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCAGAAGCAGAAGCTTGTCTGAGAAAATGGGTGGTGTTGCTCCACTTGCAATTGGCACGCGAGGCACTGTGGGGTCGCTGGTGATGAAGGAGATTGAGTACTTCACCAAGCTTGAGCTCGAACGCCATGGCGGCTCTCACATTATAAATGCAGATGCTTTGAGAAGAAGCGATTCTAAAGGAAGCTTTTGGCTTTTGTCCTTGACTTGGAAATGGAAGAAGAGAAAAAACAACAATGGGATTCTCCCTAACATCTGTTCTGCTGTTGAATTCTCAAAAAGCAATCGCTTTAATGGGATTCCTGGCTTCGGTTACAGAATTCTCAAAGATGACTTTCCCATTTGA

mRNA sequence

ATGAGCAGAAGCAGAAGCTTGTCTGAGAAAATGGGTGGTGTTGCTCCACTTGCAATTGGCACGCGAGGCACTGTGGGGTCGCTGGTGATGAAGGAGATTGAGTACTTCACCAAGCTTGAGCTCGAACGCCATGGCGGCTCTCACATTATAAATGCAGATGCTTTGAGAAGAAGCGATTCTAAAGGAAGCTTTTGGCTTTTGTCCTTGACTTGGAAATGGAAGAAGAGAAAAAACAACAATGGGATTCTCCCTAACATCTGTTCTGCTGTTGAATTCTCAAAAAGCAATCGCTTTAATGGGATTCCTGGCTTCGGTTACAGAATTCTCAAAGATGACTTTCCCATTTGA

Coding sequence (CDS)

ATGAGCAGAAGCAGAAGCTTGTCTGAGAAAATGGGTGGTGTTGCTCCACTTGCAATTGGCACGCGAGGCACTGTGGGGTCGCTGGTGATGAAGGAGATTGAGTACTTCACCAAGCTTGAGCTCGAACGCCATGGCGGCTCTCACATTATAAATGCAGATGCTTTGAGAAGAAGCGATTCTAAAGGAAGCTTTTGGCTTTTGTCCTTGACTTGGAAATGGAAGAAGAGAAAAAACAACAATGGGATTCTCCCTAACATCTGTTCTGCTGTTGAATTCTCAAAAAGCAATCGCTTTAATGGGATTCCTGGCTTCGGTTACAGAATTCTCAAAGATGACTTTCCCATTTGA

Protein sequence

MSRSRSLSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALRRSDSKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNGIPGFGYRILKDDFPI
Homology
BLAST of CmUC01G021470 vs. NCBI nr
Match: XP_038882225.1 (uncharacterized protein LOC120073447 [Benincasa hispida])

HSP 1 Score: 230.7 bits (587), Expect = 6.3e-57
Identity = 111/115 (96.52%), Postives = 112/115 (97.39%), Query Frame = 0

Query: 1   MSRSRSLSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALRRSDS 60
           MSRSRS SEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSH I+ DALRRSDS
Sbjct: 5   MSRSRSFSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHTISGDALRRSDS 64

Query: 61  KGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNGIPGFGYRILKDDFPI 116
           KGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNGIPGFGYRILKDDFPI
Sbjct: 65  KGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNGIPGFGYRILKDDFPI 119

BLAST of CmUC01G021470 vs. NCBI nr
Match: XP_008441098.1 (PREDICTED: uncharacterized protein LOC103485325 [Cucumis melo] >TYK13056.1 uncharacterized protein E5676_scaffold255G006580 [Cucumis melo var. makuwa])

HSP 1 Score: 215.7 bits (548), Expect = 2.1e-52
Identity = 107/116 (92.24%), Postives = 108/116 (93.10%), Query Frame = 0

Query: 1   MSRSRSLSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALRRSD 60
           MSRSRS SEKMGG VAPLAIGTRGTVGSLVMKEIEYFT LELERHG SH I  +ALRRSD
Sbjct: 5   MSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGSSHTIRGNALRRSD 64

Query: 61  SKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNGIPGFGYRILKDDFPI 116
           SKGSFWLLSLTWKWKKRKNNNGILPNI SAVEFSKSNRFNGIPGFGYRILKDDFPI
Sbjct: 65  SKGSFWLLSLTWKWKKRKNNNGILPNISSAVEFSKSNRFNGIPGFGYRILKDDFPI 120

BLAST of CmUC01G021470 vs. NCBI nr
Match: XP_011658506.1 (uncharacterized protein LOC105436036 [Cucumis sativus])

HSP 1 Score: 212.6 bits (540), Expect = 1.8e-51
Identity = 105/116 (90.52%), Postives = 109/116 (93.97%), Query Frame = 0

Query: 1   MSRSRSLSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALRRSD 60
           MSRSRS SEKMGG VAPLAIGTRGTVGSLVMKEIEYFTKLELERHG SH I+ +ALRRSD
Sbjct: 5   MSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGISHTISGNALRRSD 64

Query: 61  SKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNGIPGFGYRILKDDFPI 116
           S+GSFWLLSLTWKWKKRK NNG+LPNI SAVEFSKSNRFNGIPGFGYRILKDDFPI
Sbjct: 65  SRGSFWLLSLTWKWKKRKGNNGVLPNISSAVEFSKSNRFNGIPGFGYRILKDDFPI 120

BLAST of CmUC01G021470 vs. NCBI nr
Match: KAG6603769.1 (hypothetical protein SDJN03_04378, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 205.3 bits (521), Expect = 2.8e-49
Identity = 99/115 (86.09%), Postives = 103/115 (89.57%), Query Frame = 0

Query: 1   MSRSRSLSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALRRSDS 60
           MSRSRSLSEKM G+APLAIGTRGTVGSLVMKEIEYFTK E+ERHG S  I+ DA RRSD 
Sbjct: 5   MSRSRSLSEKMDGIAPLAIGTRGTVGSLVMKEIEYFTKFEVERHGSSQRISGDASRRSDC 64

Query: 61  KGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNGIPGFGYRILKDDFPI 116
           KGSFWL+SLTWKWKKRK NNGILPNICSAVE SKSNRFNGIPGF YRILK DFPI
Sbjct: 65  KGSFWLVSLTWKWKKRKGNNGILPNICSAVELSKSNRFNGIPGFSYRILKHDFPI 119

BLAST of CmUC01G021470 vs. NCBI nr
Match: XP_022977336.1 (uncharacterized protein LOC111477686 [Cucurbita maxima])

HSP 1 Score: 203.8 bits (517), Expect = 8.2e-49
Identity = 98/115 (85.22%), Postives = 102/115 (88.70%), Query Frame = 0

Query: 1   MSRSRSLSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALRRSDS 60
           MSRSRS SEKM G+APLAIGTRGTVGSLVMKEIEYFTK E+ERHG S  I+ DA RRSD 
Sbjct: 5   MSRSRSFSEKMDGIAPLAIGTRGTVGSLVMKEIEYFTKFEVERHGSSQRISGDASRRSDC 64

Query: 61  KGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNGIPGFGYRILKDDFPI 116
           KGSFWL+SLTWKWKKRK NNGILPNICSAVE SKSNRFNGIPGF YRILK DFPI
Sbjct: 65  KGSFWLVSLTWKWKKRKGNNGILPNICSAVELSKSNRFNGIPGFSYRILKHDFPI 119

BLAST of CmUC01G021470 vs. ExPASy TrEMBL
Match: A0A5D3CRM5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006580 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.0e-52
Identity = 107/116 (92.24%), Postives = 108/116 (93.10%), Query Frame = 0

Query: 1   MSRSRSLSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALRRSD 60
           MSRSRS SEKMGG VAPLAIGTRGTVGSLVMKEIEYFT LELERHG SH I  +ALRRSD
Sbjct: 5   MSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGSSHTIRGNALRRSD 64

Query: 61  SKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNGIPGFGYRILKDDFPI 116
           SKGSFWLLSLTWKWKKRKNNNGILPNI SAVEFSKSNRFNGIPGFGYRILKDDFPI
Sbjct: 65  SKGSFWLLSLTWKWKKRKNNNGILPNISSAVEFSKSNRFNGIPGFGYRILKDDFPI 120

BLAST of CmUC01G021470 vs. ExPASy TrEMBL
Match: A0A1S3B3D8 (uncharacterized protein LOC103485325 OS=Cucumis melo OX=3656 GN=LOC103485325 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.0e-52
Identity = 107/116 (92.24%), Postives = 108/116 (93.10%), Query Frame = 0

Query: 1   MSRSRSLSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALRRSD 60
           MSRSRS SEKMGG VAPLAIGTRGTVGSLVMKEIEYFT LELERHG SH I  +ALRRSD
Sbjct: 5   MSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGSSHTIRGNALRRSD 64

Query: 61  SKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNGIPGFGYRILKDDFPI 116
           SKGSFWLLSLTWKWKKRKNNNGILPNI SAVEFSKSNRFNGIPGFGYRILKDDFPI
Sbjct: 65  SKGSFWLLSLTWKWKKRKNNNGILPNISSAVEFSKSNRFNGIPGFGYRILKDDFPI 120

BLAST of CmUC01G021470 vs. ExPASy TrEMBL
Match: A0A0A0KL84 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G514830 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 8.6e-52
Identity = 105/116 (90.52%), Postives = 109/116 (93.97%), Query Frame = 0

Query: 1   MSRSRSLSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALRRSD 60
           MSRSRS SEKMGG VAPLAIGTRGTVGSLVMKEIEYFTKLELERHG SH I+ +ALRRSD
Sbjct: 5   MSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGISHTISGNALRRSD 64

Query: 61  SKGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNGIPGFGYRILKDDFPI 116
           S+GSFWLLSLTWKWKKRK NNG+LPNI SAVEFSKSNRFNGIPGFGYRILKDDFPI
Sbjct: 65  SRGSFWLLSLTWKWKKRKGNNGVLPNISSAVEFSKSNRFNGIPGFGYRILKDDFPI 120

BLAST of CmUC01G021470 vs. ExPASy TrEMBL
Match: A0A6J1IJL8 (uncharacterized protein LOC111477686 OS=Cucurbita maxima OX=3661 GN=LOC111477686 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 4.0e-49
Identity = 98/115 (85.22%), Postives = 102/115 (88.70%), Query Frame = 0

Query: 1   MSRSRSLSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALRRSDS 60
           MSRSRS SEKM G+APLAIGTRGTVGSLVMKEIEYFTK E+ERHG S  I+ DA RRSD 
Sbjct: 5   MSRSRSFSEKMDGIAPLAIGTRGTVGSLVMKEIEYFTKFEVERHGSSQRISGDASRRSDC 64

Query: 61  KGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNGIPGFGYRILKDDFPI 116
           KGSFWL+SLTWKWKKRK NNGILPNICSAVE SKSNRFNGIPGF YRILK DFPI
Sbjct: 65  KGSFWLVSLTWKWKKRKGNNGILPNICSAVELSKSNRFNGIPGFSYRILKHDFPI 119

BLAST of CmUC01G021470 vs. ExPASy TrEMBL
Match: A0A6J1EEE9 (uncharacterized protein LOC111433571 OS=Cucurbita moschata OX=3662 GN=LOC111433571 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 9.8e-48
Identity = 98/118 (83.05%), Postives = 105/118 (88.98%), Query Frame = 0

Query: 1   MSRSRSLSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSHIINADALRRSDS 60
           +SRS S SE+MG VAPLAIGTRGT+GSLVMKEIEYFTKLELERHGGS  ++ DA RRSDS
Sbjct: 5   ISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASRRSDS 64

Query: 61  KGSFWLLSLTWKWKKRKNNNGILPNICSAVEFSKSNRFNGIPGFGYRILKDD---FPI 116
           K SFWLLSL+WKWKKR+ NNGILPNICSAVE SKSNRFNGIPGFGYRILKDD   FPI
Sbjct: 65  KTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSNRFNGIPGFGYRILKDDVTHFPI 122

BLAST of CmUC01G021470 vs. TAIR 10
Match: AT4G21780.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 81.3 bits (199), Expect = 5.7e-16
Identity = 47/109 (43.12%), Postives = 61/109 (55.96%), Query Frame = 0

Query: 15  APLAIGTRGTVGSLVMKEIEYFTKL-----ELERHGGSHIINADALR---RSDSKGSFWL 74
           AP+AIGTRGT+GSLV KEI+YF        + +   G+   N +  +   RS S+   W 
Sbjct: 3   APIAIGTRGTIGSLVRKEIDYFKNFSTCHPQFDPRRGNSEENKNTFKQRDRSSSRLGSWF 62

Query: 75  LSLTWKWKKRKNNNG---ILPNICSAVEFSKSNRFNGIPGFGYRILKDD 113
               W+ KKR+   G     P++CSAVE S  NR   +PGF YRILK D
Sbjct: 63  SKTKWRKKKRQTRGGGGKFFPSMCSAVEVSGENR---VPGFNYRILKSD 108

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038882225.16.3e-5796.52uncharacterized protein LOC120073447 [Benincasa hispida][more]
XP_008441098.12.1e-5292.24PREDICTED: uncharacterized protein LOC103485325 [Cucumis melo] >TYK13056.1 uncha... [more]
XP_011658506.11.8e-5190.52uncharacterized protein LOC105436036 [Cucumis sativus][more]
KAG6603769.12.8e-4986.09hypothetical protein SDJN03_04378, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022977336.18.2e-4985.22uncharacterized protein LOC111477686 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CRM51.0e-5292.24Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3B3D81.0e-5292.24uncharacterized protein LOC103485325 OS=Cucumis melo OX=3656 GN=LOC103485325 PE=... [more]
A0A0A0KL848.6e-5290.52Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G514830 PE=4 SV=1[more]
A0A6J1IJL84.0e-4985.22uncharacterized protein LOC111477686 OS=Cucurbita maxima OX=3661 GN=LOC111477686... [more]
A0A6J1EEE99.8e-4883.05uncharacterized protein LOC111433571 OS=Cucurbita moschata OX=3662 GN=LOC1114335... [more]
Match NameE-valueIdentityDescription
AT4G21780.15.7e-1643.12unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35131EXPRESSED PROTEINcoord: 4..112
NoneNo IPR availablePANTHERPTHR35131:SF1EXPRESSED PROTEINcoord: 4..112

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC01G021470.1CmUC01G021470.1mRNA