Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAATTGCATCAACACACCCCATTTCCCACCTCTGCAAAAGATCAAAGGCTTCATATGCTGTCAAGTAGAAGATTTAAACTTGGCATTGCCCATTGAAAAGATAGCTTATGGAGCTTATAAAGGCTTAAAGCTAACAAGTCAAGCCTTTACAACTTCGAGTGCAGTGCTAGAAGTTGAGCATGGCCCTCCTCCACTTCCTCTTCGTATTGATGATTCTATTATCAAGCCAGCAGATTTGTGCAAACTTCCTAAGGCCACCATTGTAGTCAGCAAACAACAGCTTGAGTTGATTTTGAGAAATTCTAAAAGCTTTGGCTCTAAAGGTATTGCTGTTCAATTCTCTGATAGTTTCGAGGTCGACGATCGATGCCCCAGATGGCGCCCCGCCTTGCCTACCATTCCAGAGGTTCGCAATTACTAG
mRNA sequence
ATGGGAAATTGCATCAACACACCCCATTTCCCACCTCTGCAAAAGATCAAAGGCTTCATATGCTGTCAAGTAGAAGATTTAAACTTGGCATTGCCCATTGAAAAGATAGCTTATGGAGCTTATAAAGGCTTAAAGCTAACAAGTCAAGCCTTTACAACTTCGAGTGCAGTGCTAGAAGTTGAGCATGGCCCTCCTCCACTTCCTCTTCGTATTGATGATTCTATTATCAAGCCAGCAGATTTGTGCAAACTTCCTAAGGCCACCATTGTAGTCAGCAAACAACAGCTTGAGTTGATTTTGAGAAATTCTAAAAGCTTTGGCTCTAAAGGTATTGCTGTTCAATTCTCTGATAGTTTCGAGGTCGACGATCGATGCCCCAGATGGCGCCCCGCCTTGCCTACCATTCCAGAGGTTCGCAATTACTAG
Coding sequence (CDS)
ATGGGAAATTGCATCAACACACCCCATTTCCCACCTCTGCAAAAGATCAAAGGCTTCATATGCTGTCAAGTAGAAGATTTAAACTTGGCATTGCCCATTGAAAAGATAGCTTATGGAGCTTATAAAGGCTTAAAGCTAACAAGTCAAGCCTTTACAACTTCGAGTGCAGTGCTAGAAGTTGAGCATGGCCCTCCTCCACTTCCTCTTCGTATTGATGATTCTATTATCAAGCCAGCAGATTTGTGCAAACTTCCTAAGGCCACCATTGTAGTCAGCAAACAACAGCTTGAGTTGATTTTGAGAAATTCTAAAAGCTTTGGCTCTAAAGGTATTGCTGTTCAATTCTCTGATAGTTTCGAGGTCGACGATCGATGCCCCAGATGGCGCCCCGCCTTGCCTACCATTCCAGAGGTTCGCAATTACTAG
Protein sequence
MGNCINTPHFPPLQKIKGFICCQVEDLNLALPIEKIAYGAYKGLKLTSQAFTTSSAVLEVEHGPPPLPLRIDDSIIKPADLCKLPKATIVVSKQQLELILRNSKSFGSKGIAVQFSDSFEVDDRCPRWRPALPTIPEVRNY
Homology
BLAST of CmUC01G020710 vs. NCBI nr
Match:
KAE8647639.1 (hypothetical protein Csa_004428 [Cucumis sativus])
HSP 1 Score: 226.1 bits (575), Expect = 1.9e-55
Identity = 113/139 (81.29%), Postives = 119/139 (85.61%), Query Frame = 0
Query: 1 MGNCINTPHFPPLQKIKGFICCQVEDLNLALPIEKIAYGAYKGLKLTSQAFTTSSAV--L 60
MGNCINT HFPPLQKIKGFICC+VEDLNLALPIE IA +QAFTTSSAV
Sbjct: 1 MGNCINTLHFPPLQKIKGFICCEVEDLNLALPIENIA-------ACKNQAFTTSSAVAEA 60
Query: 61 EVEHGPPPLPLRIDDSIIKPADLCKLPKATIVVSKQQLELILRNSKSFGSKGIAVQFSDS 120
EVEHGPPPLP+RID SI+KPADLCKLPK TIVVSKQQLELILR SK+FGSKGIAVQFSDS
Sbjct: 61 EVEHGPPPLPVRIDHSIVKPADLCKLPKTTIVVSKQQLELILRKSKNFGSKGIAVQFSDS 120
Query: 121 FEVDDRCPRWRPALPTIPE 138
F+VDD CPRW PALPTIPE
Sbjct: 121 FKVDDGCPRWHPALPTIPE 132
BLAST of CmUC01G020710 vs. NCBI nr
Match:
KAA0025575.1 (hypothetical protein E6C27_scaffold253G00640 [Cucumis melo var. makuwa] >TYK12450.1 hypothetical protein E5676_scaffold255G00250 [Cucumis melo var. makuwa])
HSP 1 Score: 224.9 bits (572), Expect = 4.2e-55
Identity = 112/141 (79.43%), Postives = 120/141 (85.11%), Query Frame = 0
Query: 1 MGNCINTPHFPPLQKIKGFICCQVEDLNLALPIEKIAYGAYKGLKLTSQAFTTSSAVLEV 60
MGNCINT HFPPLQKIKGFICC+VE L+L LPI +A AY K SQAFTTSSAV EV
Sbjct: 1 MGNCINTHHFPPLQKIKGFICCEVEGLDLGLPIGNVA--AYGDCK--SQAFTTSSAVAEV 60
Query: 61 EHGPPPLPLRIDDSIIKPADLCKLPKATIVVSKQQLELILRNSKSFGSKGIAVQFSDSFE 120
+H PPPLP+RID SI+KPAD KLPKATIVVSKQQLELILR SK+FGSKGIAVQFSD F+
Sbjct: 61 QHSPPPLPVRIDHSIVKPADKSKLPKATIVVSKQQLELILRKSKNFGSKGIAVQFSDRFK 120
Query: 121 VDDRCPRWRPALPTIPEVRNY 142
VDD CPRW PALPTIPEVRNY
Sbjct: 121 VDDGCPRWHPALPTIPEVRNY 137
BLAST of CmUC01G020710 vs. NCBI nr
Match:
KAG6603830.1 (hypothetical protein SDJN03_04439, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 200.7 bits (509), Expect = 8.5e-48
Identity = 105/144 (72.92%), Postives = 113/144 (78.47%), Query Frame = 0
Query: 1 MGNCINTPHFPPLQKIKGFICCQVEDLNLALPIEKIAYGAYKGLKLTSQAFTTSSAVLEV 60
MGNCINT HF PLQK+K ICC+ EDL+LALPIEKIA GAY TTSSAVLEV
Sbjct: 1 MGNCINTAHFRPLQKLKDLICCEGEDLSLALPIEKIASGAY----------TTSSAVLEV 60
Query: 61 EHGPPPLPLRI--DDSIIKPADLCKLPK-ATIVVSKQQLELILRNSKSFGSKGIAVQFSD 120
+ G PPLP+ I DD++ KP LCKLPK TIVVSKQQLELILRNS+ F SKGIAVQFSD
Sbjct: 61 DRGAPPLPVSIDDDDAVSKPDALCKLPKTTTIVVSKQQLELILRNSRKFASKGIAVQFSD 120
Query: 121 SFEVDDRCPRWRPALPTIPEVRNY 142
SFEVDDRCPRW PALPTI EV NY
Sbjct: 121 SFEVDDRCPRWCPALPTILEVHNY 134
BLAST of CmUC01G020710 vs. NCBI nr
Match:
KAG6594706.1 (hypothetical protein SDJN03_11259, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 132.1 bits (331), Expect = 3.7e-27
Identity = 78/145 (53.79%), Postives = 89/145 (61.38%), Query Frame = 0
Query: 1 MGNCINTPHFPPLQKIKGFICCQVEDLNLALPIEKIAYGAYKGLKLTSQAFTTSSAVLEV 60
MGNCI++PH +LA+P+EKIA GLKLT SAVLEV
Sbjct: 1 MGNCISSPHL----------------YDLAVPVEKIA-----GLKLT-------SAVLEV 60
Query: 61 EHGPPPLPLRI----DDSIIKPADLCKLPKATIVVSKQQLELILRNSKSFGSKGIAVQFS 120
G P + DD I KPA LCKLPKATIVVSK+QLE +L NS+ FGS+GIAVQFS
Sbjct: 61 GRGAATPPAHVLIDDDDDITKPAALCKLPKATIVVSKEQLEFLLTNSQQFGSQGIAVQFS 117
Query: 121 DSFEVDDRCPRWRPALPTIPEVRNY 142
DSF+ D C RW P LPTI EV NY
Sbjct: 121 DSFKFDRSCSRWCPVLPTILEVHNY 117
BLAST of CmUC01G020710 vs. NCBI nr
Match:
KAF9851460.1 (hypothetical protein H0E87_015599 [Populus deltoides])
HSP 1 Score: 90.1 bits (222), Expect = 1.6e-14
Identity = 61/152 (40.13%), Postives = 83/152 (54.61%), Query Frame = 0
Query: 1 MGNCINTPHFPPLQKIKGFICCQVE-DLNLALPIEKIAYGAYKGLKLTSQAF-------T 60
MGNCI+ + ++ K I E + + ++KI G Y G L A
Sbjct: 1 MGNCIDVLSYSSAERSKVLIHNGGEKEFKSSTRVQKITSGRYGGYMLVHSALPYVPLPPD 60
Query: 61 TSSAVLEVEHGPPPL--PLRID-DSIIKPADLCKLPKATIVVSKQQLELILRNSKSFGSK 120
T EV H P L P R++ S + + C K IVV++QQLEL+LRNSK F SK
Sbjct: 61 TRLEPGEVYHLMPSLGQPCRLEVSSKLAGQETCASRKVKIVVTRQQLELLLRNSKQFRSK 120
Query: 121 GIAVQFSDSFEVDDRCPRWRPALPTIPEVRNY 142
GIAV+FS+SF+ +R +WRP+L TIPEVR +
Sbjct: 121 GIAVRFSESFKEGER--KWRPSLVTIPEVRKF 150
BLAST of CmUC01G020710 vs. ExPASy TrEMBL
Match:
A0A0A0KHP3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511050 PE=4 SV=1)
HSP 1 Score: 235.0 bits (598), Expect = 2.0e-58
Identity = 117/143 (81.82%), Postives = 123/143 (86.01%), Query Frame = 0
Query: 1 MGNCINTPHFPPLQKIKGFICCQVEDLNLALPIEKIAYGAYKGLKLTSQAFTTSSAV--L 60
MGNCINT HFPPLQKIKGFICC+VEDLNLALPIE IA +QAFTTSSAV
Sbjct: 1 MGNCINTLHFPPLQKIKGFICCEVEDLNLALPIENIA-------ACKNQAFTTSSAVAEA 60
Query: 61 EVEHGPPPLPLRIDDSIIKPADLCKLPKATIVVSKQQLELILRNSKSFGSKGIAVQFSDS 120
EVEHGPPPLP+RID SI+KPADLCKLPK TIVVSKQQLELILR SK+FGSKGIAVQFSDS
Sbjct: 61 EVEHGPPPLPVRIDHSIVKPADLCKLPKTTIVVSKQQLELILRKSKNFGSKGIAVQFSDS 120
Query: 121 FEVDDRCPRWRPALPTIPEVRNY 142
F+VDD CPRW PALPTIPEVRNY
Sbjct: 121 FKVDDGCPRWHPALPTIPEVRNY 136
BLAST of CmUC01G020710 vs. ExPASy TrEMBL
Match:
A0A5D3CLY8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00250 PE=4 SV=1)
HSP 1 Score: 224.9 bits (572), Expect = 2.0e-55
Identity = 112/141 (79.43%), Postives = 120/141 (85.11%), Query Frame = 0
Query: 1 MGNCINTPHFPPLQKIKGFICCQVEDLNLALPIEKIAYGAYKGLKLTSQAFTTSSAVLEV 60
MGNCINT HFPPLQKIKGFICC+VE L+L LPI +A AY K SQAFTTSSAV EV
Sbjct: 1 MGNCINTHHFPPLQKIKGFICCEVEGLDLGLPIGNVA--AYGDCK--SQAFTTSSAVAEV 60
Query: 61 EHGPPPLPLRIDDSIIKPADLCKLPKATIVVSKQQLELILRNSKSFGSKGIAVQFSDSFE 120
+H PPPLP+RID SI+KPAD KLPKATIVVSKQQLELILR SK+FGSKGIAVQFSD F+
Sbjct: 61 QHSPPPLPVRIDHSIVKPADKSKLPKATIVVSKQQLELILRKSKNFGSKGIAVQFSDRFK 120
Query: 121 VDDRCPRWRPALPTIPEVRNY 142
VDD CPRW PALPTIPEVRNY
Sbjct: 121 VDDGCPRWHPALPTIPEVRNY 137
BLAST of CmUC01G020710 vs. ExPASy TrEMBL
Match:
B9HD50 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G018200 PE=4 SV=1)
HSP 1 Score: 84.0 bits (206), Expect = 5.6e-13
Identity = 57/152 (37.50%), Postives = 81/152 (53.29%), Query Frame = 0
Query: 1 MGNCINTPHFPPLQKIKGFICCQVE-DLNLALPIEKIAYGAYKGLKLTSQAFTTSSAVLE 60
MGNCI+ + ++ K I E + + ++KI G Y G L A +
Sbjct: 1 MGNCIDVLSYSSAERSKVLIHNGGEKEFKSSTRVKKITSGRYGGYMLVHSALPYVPLPPD 60
Query: 61 VEHGP-------PPL--PLRID-DSIIKPADLCKLPKATIVVSKQQLELILRNSKSFGSK 120
P P L P R++ S + + C K IVV++QQLEL+LRNSK F SK
Sbjct: 61 TRLEPGVVYYLMPSLGQPCRLEVSSKLAGQETCASRKVKIVVTRQQLELLLRNSKQFRSK 120
Query: 121 GIAVQFSDSFEVDDRCPRWRPALPTIPEVRNY 142
GIAV+FS+SF+ +R +WRP+L TIPEV+ +
Sbjct: 121 GIAVRFSESFKEGER--KWRPSLVTIPEVQKF 150
BLAST of CmUC01G020710 vs. ExPASy TrEMBL
Match:
A0A5N5M953 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_008876 PE=4 SV=1)
HSP 1 Score: 81.6 bits (200), Expect = 2.8e-12
Identity = 60/149 (40.27%), Postives = 83/149 (55.70%), Query Frame = 0
Query: 1 MGNCINTPHFPPLQKIKGFICCQVE-DLNLALPIEKIAYGAYKGLKLTSQAFTTS----S 60
MGNCI+ ++ K I E + + P++KI G Y G L ++A +
Sbjct: 1 MGNCIDFMPCSSGERSKVLIHNGGEKEFKSSTPVKKITSGRYGGYILVNRALPYAPLPPD 60
Query: 61 AVL---EVEHGPPPL--PLRID-DSIIKPADLCKLPKATIVVSKQQLELILRNSKSFGSK 120
VL EV H PPL P R++ S + + C K IVV++QQLEL+LRNSK +
Sbjct: 61 TVLEPGEVYHLMPPLDQPSRLEVSSKLTGQEACAGRKVKIVVTRQQLELLLRNSKQLKLR 120
Query: 121 GIAVQFSDSFEVDDRCPRWRPALPTIPEV 139
GIAVQFS+SF+ R +W+P+L TIPEV
Sbjct: 121 GIAVQFSESFKEGKR--KWQPSLVTIPEV 147
BLAST of CmUC01G020710 vs. ExPASy TrEMBL
Match:
A0A6A1W907 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR2G006267 PE=4 SV=1)
HSP 1 Score: 79.0 bits (193), Expect = 1.8e-11
Identity = 51/157 (32.48%), Postives = 77/157 (49.04%), Query Frame = 0
Query: 1 MGNCINTPHFPPLQKIKGFICCQVE-DLNLALPIEKIAYGAYKGLKLTSQAFTTSSAV-- 60
MGNC + P +KI+ + + E + + P+EKI G Y G KL + S +
Sbjct: 1 MGNCADVMLRPTEEKIRVLVFNEGEKEFSARTPVEKITCGPYSGFKLVHHSQPDSPLLPD 60
Query: 61 -------------LEVEHGPPPLPLRIDDSIIKPADLCKLPKATIVVSKQQLELILRNSK 120
L+ + PP+P R + + K K IVV+K QLEL+LR++
Sbjct: 61 ARLQPGELYYLVPLQAQPHHPPIPSRTANQ-----ETGKQKKVKIVVTKGQLELLLRSTD 120
Query: 121 SFGSKGIAVQFSDSFEVDDRCPRWRPALPTIPEVRNY 142
F SK IA+ SF+V + +WRP+L IPEV ++
Sbjct: 121 KFKSKDIAIHCLGSFQVGEGRRKWRPSLTMIPEVHSF 152
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAE8647639.1 | 1.9e-55 | 81.29 | hypothetical protein Csa_004428 [Cucumis sativus] | [more] |
KAA0025575.1 | 4.2e-55 | 79.43 | hypothetical protein E6C27_scaffold253G00640 [Cucumis melo var. makuwa] >TYK1245... | [more] |
KAG6603830.1 | 8.5e-48 | 72.92 | hypothetical protein SDJN03_04439, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG6594706.1 | 3.7e-27 | 53.79 | hypothetical protein SDJN03_11259, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAF9851460.1 | 1.6e-14 | 40.13 | hypothetical protein H0E87_015599 [Populus deltoides] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0KHP3 | 2.0e-58 | 81.82 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511050 PE=4 SV=1 | [more] |
A0A5D3CLY8 | 2.0e-55 | 79.43 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
B9HD50 | 5.6e-13 | 37.50 | Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G018200 PE=4 ... | [more] |
A0A5N5M953 | 2.8e-12 | 40.27 | Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_008876 PE=4 SV=1 | [more] |
A0A6A1W907 | 1.8e-11 | 32.48 | Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR2G006267 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |