CmUC01G020600 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC01G020600
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Unknown protein
Location	CmU531Chr01: 33270054 .. 33270594 (-)
RNA-Seq Expression	CmUC01G020600
Synteny	CmUC01G020600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCATCAAATCGGGATATCAGTCGATCAACATAGCCATTGCAAATGCAGTTTCTGGGTACAATTTCAACTAGTCTAAACTGAATTAAAATTACTAAACGAACTCCATAAACATGATCGACAACTAATAAGAACTTATAAGAGCCAAAAGAAACCCGGATCTTTCTCACTGAAACACGGTTTCAGTGAAACCCCATCACAGATCCAAAGCCAGGTCGCGACCCAGATGCGAGAAACATAACCAGAAGATAAGGCGATGCAGACCCTTGAAGAACAAAGGCAAGAAAACCAAAAAGCAAAGCGAGAGTAGCCGAAAAGTATACCCAAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATTTCAAGAACTGGAGCTGAGCAGCTTTGCTTTTGTTGGCAGAGTAAAAGGAGTGCTGTAGAAAGATGTCTTGAAATAGCTCAGCCCTGAGAGAAGAAGGAAAGGAAGGGAGGGAGAAGAGAGTAATAAAAATGGATTTAGCTCTGGTTCTGGTGGATTAGAAGAGAAGGAGGAGAGGTAG

mRNA sequence

ATGACCATCAAATCGGGATATCAGTCGATCAACATAGCCATTGCAAATGCAGTTTCTGGATGCGAGAAACATAACCAGAAGATAAGGCGATGCAGACCCTTGAAGAACAAAGGCAAGAAAACCAAAAAGCAAAGCGAGAGTAGCCGAAAAGTATACCCAAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATTTCAAGAACTGGAGCTGAGCAGCTTTGCTTTTGTTGGCAGAGTAAAAGGAGTGCTAGAAGAAGGAAAGGAAGGGAGGGAGAAGAGAGTAATAAAAATGGATTTAGCTCTGGTTCTGGTGGATTAGAAGAGAAGGAGGAGAGGTAG

Coding sequence (CDS)

ATGACCATCAAATCGGGATATCAGTCGATCAACATAGCCATTGCAAATGCAGTTTCTGGATGCGAGAAACATAACCAGAAGATAAGGCGATGCAGACCCTTGAAGAACAAAGGCAAGAAAACCAAAAAGCAAAGCGAGAGTAGCCGAAAAGTATACCCAAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATTTCAAGAACTGGAGCTGAGCAGCTTTGCTTTTGTTGGCAGAGTAAAAGGAGTGCTAGAAGAAGGAAAGGAAGGGAGGGAGAAGAGAGTAATAAAAATGGATTTAGCTCTGGTTCTGGTGGATTAGAAGAGAAGGAGGAGAGGTAG

Protein sequence

MTIKSGYQSINIAIANAVSGCEKHNQKIRRCRPLKNKGKKTKKQSESSRKVYPKKKKKKKKKKKISRTGAEQLCFCWQSKRSARRRKGREGEESNKNGFSSGSGGLEEKEER

Homology

The following BLAST results are available for this feature:

BLAST of CmUC01G020600 vs.


Match Name	E-value	Identity	Description

BLAST of CmUC01G020600 vs.


Match Name	E-value	Identity	Description

BLAST of CmUC01G020600 vs.


Match Name	E-value	Identity	Description

BLAST of CmUC01G020600 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 106..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..68
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..21 score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC01G020600.1	CmUC01G020600.1	mRNA