CmUC01G019340 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC01G019340
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	3-epi-6-deoxocathasterone 23-monooxygenase
Location	CmU531Chr01: 32341775 .. 32342306 (+)
RNA-Seq Expression	CmUC01G019340
Synteny	CmUC01G019340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAGAGGTTCATCAATGACTTCTATCAATGATATACTTCAAAAACTGGAAATTTCATATCTTCAATGAGTTTTTTGGACATTTTTCGCGGTTAAAAGTAAATTTTATTATATTTGCCATAGTTTTGAAAAAGAAGCCTATCAAAGATAAATTTCTATAAAATAATTATATCAATGATAAGCTTCTATTACAGATAGAGTGCTATATTTCTATCAATTATACTTCTATCAAAGGAATTTTGTGCCTCAAACCTATTTTCGTGCCTTTAAATGATATTTTGGACATTTTTTATGGAGCGAAGGTAAACTTTGTTATATTTGCCATTAGTTTTAAATTTTGTTACTTTTGCAATATTTTAGCCAGGAAGCTTTTTAAATTATAGGAATGAATGGAAATGTTTTAAACAAAGAGTTCAAACAATGATTGGAGCCTTCCTAAGATCCCCTCAACTCAAAGCCCAAATCACACTAGATATTCAAAACACTGTTAAACTTACACTTGCCAATTGGAATTCCTCTCAATTGGGCTGA

mRNA sequence

ATGATAGAGCCAGGAAGCTTTTTAAATTATAGGAATGAATGGAAATGTTTTAAACAAAGAGTTCAAACAATGATTGGAGCCTTCCTAAGATCCCCTCAACTCAAAGCCCAAATCACACTAGATATTCAAAACACTGTTAAACTTACACTTGCCAATTGGAATTCCTCTCAATTGGGCTGA

Coding sequence (CDS)

ATGATAGAGCCAGGAAGCTTTTTAAATTATAGGAATGAATGGAAATGTTTTAAACAAAGAGTTCAAACAATGATTGGAGCCTTCCTAAGATCCCCTCAACTCAAAGCCCAAATCACACTAGATATTCAAAACACTGTTAAACTTACACTTGCCAATTGGAATTCCTCTCAATTGGGCTGA

Protein sequence

MIEPGSFLNYRNEWKCFKQRVQTMIGAFLRSPQLKAQITLDIQNTVKLTLANWNSSQLG

Homology

[Close]

BLAST of CmUC01G019340 vs. NCBI nr
Match: XP_038881879.1 (3-epi-6-deoxocathasterone 23-monooxygenase CYP90C1 [Benincasa hispida])

HSP 1 Score: 68.9 bits (167), Expect = 1.6e-08
Identity = 33/41 (80.49%), Postives = 38/41 (92.68%), Query Frame = 0


Query: 18  KQRVQTMIGAFLRSPQLKAQITLDIQNTVKLTLANWNSSQL 59
           ++RV T+IGAFLRSPQLKAQIT DIQNTV+L L+NWNSSQL
Sbjct: 130 QKRVHTLIGAFLRSPQLKAQITQDIQNTVQLRLSNWNSSQL 170

[Close]

BLAST of CmUC01G019340 vs. NCBI nr
Match: KAE8647598.1 (hypothetical protein Csa_003166 [Cucumis sativus])

HSP 1 Score: 67.4 bits (163), Expect = 4.7e-08
Identity = 32/41 (78.05%), Postives = 38/41 (92.68%), Query Frame = 0


Query: 18  KQRVQTMIGAFLRSPQLKAQITLDIQNTVKLTLANWNSSQL 59
           ++R+ T+IGAFLRSPQLKAQIT DIQNTV+L LANWN+SQL
Sbjct: 123 QRRLHTIIGAFLRSPQLKAQITKDIQNTVQLRLANWNNSQL 163

[Close]

BLAST of CmUC01G019340 vs. NCBI nr
Match: XP_004149982.1 (3-epi-6-deoxocathasterone 23-monooxygenase CYP90C1 [Cucumis sativus])

HSP 1 Score: 67.4 bits (163), Expect = 4.7e-08
Identity = 32/41 (78.05%), Postives = 38/41 (92.68%), Query Frame = 0


Query: 18  KQRVQTMIGAFLRSPQLKAQITLDIQNTVKLTLANWNSSQL 59
           ++R+ T+IGAFLRSPQLKAQIT DIQNTV+L LANWN+SQL
Sbjct: 123 QRRLHTIIGAFLRSPQLKAQITKDIQNTVQLRLANWNNSQL 163

[Close]

BLAST of CmUC01G019340 vs. NCBI nr
Match: XP_022963240.1 (3-epi-6-deoxocathasterone 23-monooxygenase [Cucurbita moschata])

HSP 1 Score: 63.9 bits (154), Expect = 5.2e-07
Identity = 28/42 (66.67%), Postives = 38/42 (90.48%), Query Frame = 0


Query: 17  FKQRVQTMIGAFLRSPQLKAQITLDIQNTVKLTLANWNSSQL 59
           F++R+ ++IGAFL+SP LKA+IT DIQNTVKL L+NWN+S+L
Sbjct: 133 FQKRIHSLIGAFLKSPSLKARITTDIQNTVKLRLSNWNTSKL 174

[Close]

BLAST of CmUC01G019340 vs. NCBI nr
Match: KAG7026770.1 (3-epi-6-deoxocathasterone 23-monooxygenase [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 63.5 bits (153), Expect = 6.8e-07
Identity = 28/42 (66.67%), Postives = 38/42 (90.48%), Query Frame = 0


Query: 17  FKQRVQTMIGAFLRSPQLKAQITLDIQNTVKLTLANWNSSQL 59
           F++R+ ++IGAFL+SP LKA+IT DIQNTVKL L+NWN+S+L
Sbjct: 136 FQKRIHSIIGAFLKSPSLKARITTDIQNTVKLRLSNWNTSKL 177

[Close]

BLAST of CmUC01G019340 vs. ExPASy Swiss-Prot
Match: Q9M066 (3-epi-6-deoxocathasterone 23-monooxygenase CYP90C1 OS=Arabidopsis thaliana OX=3702 GN=CYP90C1 PE=1 SV=3)

HSP 1 Score: 47.8 bits (112), Expect = 5.1e-05
Identity = 22/36 (61.11%), Postives = 30/36 (83.33%), Query Frame = 0


Query: 18  KQRVQTMIGAFLRSPQLKAQITLDIQNTVKLTLANW 54
           ++R+ T+IGAFLRSP LK +IT DI+ +V LTLA+W
Sbjct: 163 QKRLHTLIGAFLRSPHLKDRITRDIEASVVLTLASW 198

[Close]

BLAST of CmUC01G019340 vs. ExPASy TrEMBL
Match: A0A0A0KH50 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G504590 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.3e-08
Identity = 32/41 (78.05%), Postives = 38/41 (92.68%), Query Frame = 0


Query: 18  KQRVQTMIGAFLRSPQLKAQITLDIQNTVKLTLANWNSSQL 59
           ++R+ T+IGAFLRSPQLKAQIT DIQNTV+L LANWN+SQL
Sbjct: 123 QRRLHTIIGAFLRSPQLKAQITKDIQNTVQLRLANWNNSQL 163

[Close]

BLAST of CmUC01G019340 vs. ExPASy TrEMBL
Match: A0A6J1HHF1 (3-epi-6-deoxocathasterone 23-monooxygenase OS=Cucurbita moschata OX=3662 GN=LOC111463512 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.5e-07
Identity = 28/42 (66.67%), Postives = 38/42 (90.48%), Query Frame = 0


Query: 17  FKQRVQTMIGAFLRSPQLKAQITLDIQNTVKLTLANWNSSQL 59
           F++R+ ++IGAFL+SP LKA+IT DIQNTVKL L+NWN+S+L
Sbjct: 133 FQKRIHSLIGAFLKSPSLKARITTDIQNTVKLRLSNWNTSKL 174

[Close]

BLAST of CmUC01G019340 vs. ExPASy TrEMBL
Match: A0A6J1KKY8 (3-epi-6-deoxocathasterone 23-monooxygenase OS=Cucurbita maxima OX=3661 GN=LOC111496682 PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.6e-07
Identity = 28/42 (66.67%), Postives = 38/42 (90.48%), Query Frame = 0


Query: 17  FKQRVQTMIGAFLRSPQLKAQITLDIQNTVKLTLANWNSSQL 59
           F++R+ ++IGAFL+SP LKA+IT DIQNTVKL L+NWN+S+L
Sbjct: 135 FQKRIHSIIGAFLKSPGLKARITTDIQNTVKLRLSNWNTSKL 176

[Close]

BLAST of CmUC01G019340 vs. ExPASy TrEMBL
Match: A0A5D3CNC1 (3-epi-6-deoxocathasterone 23-monooxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001660 PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.6e-07
Identity = 29/39 (74.36%), Postives = 36/39 (92.31%), Query Frame = 0


Query: 18 KQRVQTMIGAFLRSPQLKAQITLDIQNTVKLTLANWNSS 57
          ++R+ T+IGAFLRSPQLKAQIT DIQNTV+L LANWN++
Sbjct: 6  QRRLHTIIGAFLRSPQLKAQITKDIQNTVQLRLANWNNN 44

[Close]

BLAST of CmUC01G019340 vs. ExPASy TrEMBL
Match: A0A5A7SKB2 (3-epi-6-deoxocathasterone 23-monooxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold253G002030 PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.6e-07
Identity = 29/39 (74.36%), Postives = 36/39 (92.31%), Query Frame = 0


Query: 18  KQRVQTMIGAFLRSPQLKAQITLDIQNTVKLTLANWNSS 57
           ++R+ T+IGAFLRSPQLKAQIT DIQNTV+L LANWN++
Sbjct: 124 QRRLHTIIGAFLRSPQLKAQITKDIQNTVQLRLANWNNN 162

[Close]

BLAST of CmUC01G019340 vs. TAIR 10
Match: AT4G36380.1 (Cytochrome P450 superfamily protein )

HSP 1 Score: 47.8 bits (112), Expect = 3.6e-06
Identity = 22/36 (61.11%), Postives = 30/36 (83.33%), Query Frame = 0


Query: 18  KQRVQTMIGAFLRSPQLKAQITLDIQNTVKLTLANW 54
           ++R+ T+IGAFLRSP LK +IT DI+ +V LTLA+W
Sbjct: 163 QKRLHTLIGAFLRSPHLKDRITRDIEASVVLTLASW 198

The following BLAST results are available for this feature:

BLAST of CmUC01G019340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881879.1	1.6e-08	80.49	3-epi-6-deoxocathasterone 23-monooxygenase CYP90C1 [Benincasa hispida]	[more]
KAE8647598.1	4.7e-08	78.05	hypothetical protein Csa_003166 [Cucumis sativus]	[more]
XP_004149982.1	4.7e-08	78.05	3-epi-6-deoxocathasterone 23-monooxygenase CYP90C1 [Cucumis sativus]	[more]
XP_022963240.1	5.2e-07	66.67	3-epi-6-deoxocathasterone 23-monooxygenase [Cucurbita moschata]	[more]
KAG7026770.1	6.8e-07	66.67	3-epi-6-deoxocathasterone 23-monooxygenase [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CmUC01G019340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M066	5.1e-05	61.11	3-epi-6-deoxocathasterone 23-monooxygenase CYP90C1 OS=Arabidopsis thaliana OX=37...	[more]

BLAST of CmUC01G019340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KH50	2.3e-08	78.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G504590 PE=3 SV=1	[more]
A0A6J1HHF1	2.5e-07	66.67	3-epi-6-deoxocathasterone 23-monooxygenase OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1KKY8	5.6e-07	66.67	3-epi-6-deoxocathasterone 23-monooxygenase OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A5D3CNC1	5.6e-07	74.36	3-epi-6-deoxocathasterone 23-monooxygenase OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A5A7SKB2	5.6e-07	74.36	3-epi-6-deoxocathasterone 23-monooxygenase OS=Cucumis melo var. makuwa OX=119469...	[more]

BLAST of CmUC01G019340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36380.1	3.6e-06	61.11	Cytochrome P450 superfamily protein	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC01G019340.1	CmUC01G019340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0004497	monooxygenase activity
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen