Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTACTGTCATCATCCTCTTTATTGCGATCATTGCCGGTTAATCATTTGAATTTGGCATGCAAACCGGCAAATCCACGGACGGGATTGAAGGTTCAGGCCATGGCAAAGGAAGGAAGCGAGAGCGAAGGGGGCATTGCAGAGACGGTGGCTATAGCCGGTGGGTTAGTGGCGACCCCAGTGATCGGTTGGTCGCTGTACACCCTGAAGACAACCGGGTGCGGGCTGCCGCCGGGGCCAGGTGGGTCACTCGGCGCACTGGAAGGCGTCAGCTACTTGGCGGTGGTGGGCATCGTGGGTTGGTCTCTATACACGAAAACGAAAACTGGATCGGGTCTGCCGAACGGCCCTTTCGGGCTACTGGGCGCCGTCGAAGGTCTTTCATACTTGAGTTTGTTGGCCATCTTGGTCGTTTTTGGGTTGCAGTACTTTGAACAGGGCTACATCCCCGGCCCTCTTCCGGCCGATCAGTGCTTTGGTTGA
mRNA sequence
ATGCTACTGTCATCATCCTCTTTATTGCGATCATTGCCGGTTAATCATTTGAATTTGGCATGCAAACCGGCAAATCCACGGACGGGATTGAAGGTTCAGGCCATGGCAAAGGAAGGAAGCGAGAGCGAAGGGGGCATTGCAGAGACGGTGGCTATAGCCGGTGGGTTAGTGGCGACCCCAGTGATCGGTTGGTCGCTGTACACCCTGAAGACAACCGGGTGCGGGCTGCCGCCGGGGCCAGGTGGGTCACTCGGCGCACTGGAAGGCGTCAGCTACTTGGCGGTGGTGGGCATCGTGGGTTGGTCTCTATACACGAAAACGAAAACTGGATCGGGTCTGCCGAACGGCCCTTTCGGGCTACTGGGCGCCGTCGAAGGTCTTTCATACTTGAGTTTGTTGGCCATCTTGGTCGTTTTTGGGTTGCAGTACTTTGAACAGGGCTACATCCCCGGCCCTCTTCCGGCCGATCAGTGCTTTGGTTGA
Coding sequence (CDS)
ATGCTACTGTCATCATCCTCTTTATTGCGATCATTGCCGGTTAATCATTTGAATTTGGCATGCAAACCGGCAAATCCACGGACGGGATTGAAGGTTCAGGCCATGGCAAAGGAAGGAAGCGAGAGCGAAGGGGGCATTGCAGAGACGGTGGCTATAGCCGGTGGGTTAGTGGCGACCCCAGTGATCGGTTGGTCGCTGTACACCCTGAAGACAACCGGGTGCGGGCTGCCGCCGGGGCCAGGTGGGTCACTCGGCGCACTGGAAGGCGTCAGCTACTTGGCGGTGGTGGGCATCGTGGGTTGGTCTCTATACACGAAAACGAAAACTGGATCGGGTCTGCCGAACGGCCCTTTCGGGCTACTGGGCGCCGTCGAAGGTCTTTCATACTTGAGTTTGTTGGCCATCTTGGTCGTTTTTGGGTTGCAGTACTTTGAACAGGGCTACATCCCCGGCCCTCTTCCGGCCGATCAGTGCTTTGGTTGA
Protein sequence
MLLSSSSLLRSLPVNHLNLACKPANPRTGLKVQAMAKEGSESEGGIAETVAIAGGLVATPVIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGLLGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG
Homology
BLAST of CmUC01G018820 vs. NCBI nr
Match:
XP_038882163.1 (uncharacterized protein LOC120073396 [Benincasa hispida])
HSP 1 Score: 308.9 bits (790), Expect = 2.5e-80
Identity = 156/160 (97.50%), Postives = 158/160 (98.75%), Query Frame = 0
Query: 1 MLLSSSSLLRSLPVNHLNLACKPANPRTGLKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
MLLSSSSLLRSLPVN LNLACKPANPRT +KVQAMAKEGSESEGGIAETVAIAGGLVATP
Sbjct: 1 MLLSSSSLLRSLPVNRLNLACKPANPRTRVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
Query: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
VIGWSLYTLKTTGCGLPPGPGGSLGALEG+SYLAVVGIVGWSLYTKTKTGSGLPNGPFGL
Sbjct: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGISYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
Query: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 161
LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160
BLAST of CmUC01G018820 vs. NCBI nr
Match:
XP_008440700.1 (PREDICTED: uncharacterized protein LOC103485040 [Cucumis melo] >KAA0036236.1 uncharacterized protein E6C27_scaffold18G00340 [Cucumis melo var. makuwa] >TYK12631.1 uncharacterized protein E5676_scaffold255G002180 [Cucumis melo var. makuwa])
HSP 1 Score: 307.8 bits (787), Expect = 5.6e-80
Identity = 156/160 (97.50%), Postives = 157/160 (98.12%), Query Frame = 0
Query: 1 MLLSSSSLLRSLPVNHLNLACKPANPRTGLKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
MLLSSSSLLRSLPV NLACKPANPRTG+KVQAMAKEGSESEGGIAETVAIAGGLVATP
Sbjct: 1 MLLSSSSLLRSLPVTRQNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
Query: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL
Sbjct: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
Query: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 161
LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160
BLAST of CmUC01G018820 vs. NCBI nr
Match:
XP_031744055.1 (uncharacterized protein LOC101218070 [Cucumis sativus] >KGN48822.1 hypothetical protein Csa_003134 [Cucumis sativus])
HSP 1 Score: 304.7 bits (779), Expect = 4.8e-79
Identity = 154/160 (96.25%), Postives = 157/160 (98.12%), Query Frame = 0
Query: 1 MLLSSSSLLRSLPVNHLNLACKPANPRTGLKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
MLLSSSSLL+SLPVN NLACKPANPRTG+KVQAMAKEGSESEGGIAETVAIAGGLVATP
Sbjct: 1 MLLSSSSLLQSLPVNRPNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
Query: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL
Sbjct: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
Query: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 161
LGAVEGLSYLSLLAILVVFGLQY +QGYIPGPLPADQCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYLDQGYIPGPLPADQCFG 160
BLAST of CmUC01G018820 vs. NCBI nr
Match:
XP_022950150.1 (uncharacterized protein LOC111453326 [Cucurbita moschata] >XP_023544302.1 uncharacterized protein LOC111803919 [Cucurbita pepo subsp. pepo] >KAG7034154.1 hypothetical protein SDJN02_03881, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 299.7 bits (766), Expect = 1.5e-77
Identity = 150/160 (93.75%), Postives = 155/160 (96.88%), Query Frame = 0
Query: 1 MLLSSSSLLRSLPVNHLNLACKPANPRTGLKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
MLLSSSSL+R+LPVN LN CKPANPRT +K+QAMAKEGSESEGGIAET+AIAGGLVATP
Sbjct: 1 MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60
Query: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWS YTKTKTGSGLPNGPFGL
Sbjct: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSAYTKTKTGSGLPNGPFGL 120
Query: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 161
LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160
BLAST of CmUC01G018820 vs. NCBI nr
Match:
KAG6603983.1 (hypothetical protein SDJN03_04592, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 299.3 bits (765), Expect = 2.0e-77
Identity = 150/160 (93.75%), Postives = 154/160 (96.25%), Query Frame = 0
Query: 1 MLLSSSSLLRSLPVNHLNLACKPANPRTGLKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
MLLSSSSL+R LPVN LN CKPANPRT +K+QAMAKEGSESEGGIAET+AIAGGLVATP
Sbjct: 1 MLLSSSSLVRELPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60
Query: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWS YTKTKTGSGLPNGPFGL
Sbjct: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSAYTKTKTGSGLPNGPFGL 120
Query: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 161
LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160
BLAST of CmUC01G018820 vs. ExPASy TrEMBL
Match:
A0A5A7T239 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002180 PE=4 SV=1)
HSP 1 Score: 307.8 bits (787), Expect = 2.7e-80
Identity = 156/160 (97.50%), Postives = 157/160 (98.12%), Query Frame = 0
Query: 1 MLLSSSSLLRSLPVNHLNLACKPANPRTGLKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
MLLSSSSLLRSLPV NLACKPANPRTG+KVQAMAKEGSESEGGIAETVAIAGGLVATP
Sbjct: 1 MLLSSSSLLRSLPVTRQNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
Query: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL
Sbjct: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
Query: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 161
LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160
BLAST of CmUC01G018820 vs. ExPASy TrEMBL
Match:
A0A1S3B1A0 (uncharacterized protein LOC103485040 OS=Cucumis melo OX=3656 GN=LOC103485040 PE=4 SV=1)
HSP 1 Score: 307.8 bits (787), Expect = 2.7e-80
Identity = 156/160 (97.50%), Postives = 157/160 (98.12%), Query Frame = 0
Query: 1 MLLSSSSLLRSLPVNHLNLACKPANPRTGLKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
MLLSSSSLLRSLPV NLACKPANPRTG+KVQAMAKEGSESEGGIAETVAIAGGLVATP
Sbjct: 1 MLLSSSSLLRSLPVTRQNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
Query: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL
Sbjct: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
Query: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 161
LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160
BLAST of CmUC01G018820 vs. ExPASy TrEMBL
Match:
A0A0A0KKC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502600 PE=4 SV=1)
HSP 1 Score: 304.7 bits (779), Expect = 2.3e-79
Identity = 154/160 (96.25%), Postives = 157/160 (98.12%), Query Frame = 0
Query: 1 MLLSSSSLLRSLPVNHLNLACKPANPRTGLKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
MLLSSSSLL+SLPVN NLACKPANPRTG+KVQAMAKEGSESEGGIAETVAIAGGLVATP
Sbjct: 1 MLLSSSSLLQSLPVNRPNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
Query: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL
Sbjct: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
Query: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 161
LGAVEGLSYLSLLAILVVFGLQY +QGYIPGPLPADQCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYLDQGYIPGPLPADQCFG 160
BLAST of CmUC01G018820 vs. ExPASy TrEMBL
Match:
A0A6J1GEW2 (uncharacterized protein LOC111453326 OS=Cucurbita moschata OX=3662 GN=LOC111453326 PE=4 SV=1)
HSP 1 Score: 299.7 bits (766), Expect = 7.4e-78
Identity = 150/160 (93.75%), Postives = 155/160 (96.88%), Query Frame = 0
Query: 1 MLLSSSSLLRSLPVNHLNLACKPANPRTGLKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
MLLSSSSL+R+LPVN LN CKPANPRT +K+QAMAKEGSESEGGIAET+AIAGGLVATP
Sbjct: 1 MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60
Query: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWS YTKTKTGSGLPNGPFGL
Sbjct: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSAYTKTKTGSGLPNGPFGL 120
Query: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 161
LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160
BLAST of CmUC01G018820 vs. ExPASy TrEMBL
Match:
A0A6J1IN27 (uncharacterized protein LOC111478511 OS=Cucurbita maxima OX=3661 GN=LOC111478511 PE=4 SV=1)
HSP 1 Score: 297.4 bits (760), Expect = 3.7e-77
Identity = 149/160 (93.12%), Postives = 155/160 (96.88%), Query Frame = 0
Query: 1 MLLSSSSLLRSLPVNHLNLACKPANPRTGLKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
MLLSSSSL+R+LPVN LN CKPANPRT +K+QAMAKEGSESEGGIAET+AIAGGLVATP
Sbjct: 1 MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60
Query: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWS+YTKTKTGSGLPNGPFGL
Sbjct: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSVYTKTKTGSGLPNGPFGL 120
Query: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 161
LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPA QCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPAAQCFG 160
BLAST of CmUC01G018820 vs. TAIR 10
Match:
AT3G50685.1 (unknown protein; Has 52 Blast hits to 46 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )
HSP 1 Score: 211.8 bits (538), Expect = 3.9e-55
Identity = 103/130 (79.23%), Postives = 116/130 (89.23%), Query Frame = 0
Query: 31 KVQAMAKEGSESEGGIAETVAIAGGLVATPVIGWSLYTLKTTGCGLPPGPGGSLGALEGV 90
+V A AK+ +++ GG ET AIAG LV+TPVIGWSLYTLKTTGCGLPPGP G +GALEGV
Sbjct: 30 RVVAKAKDNTDT-GGFLETAAIAGSLVSTPVIGWSLYTLKTTGCGLPPGPAGLIGALEGV 89
Query: 91 SYLAVVGIVGWSLYTKTKTGSGLPNGPFGLLGAVEGLSYLSLLAILVVFGLQYFEQGYIP 150
SYL VVGIVGWSLYTKTKTGSGLPNGPFGLLGAVEGLSYLS+LAILVVFG+Q+ + G +P
Sbjct: 90 SYLVVVGIVGWSLYTKTKTGSGLPNGPFGLLGAVEGLSYLSVLAILVVFGIQFLDNGSVP 149
Query: 151 GPLPADQCFG 161
GPLP+DQCFG
Sbjct: 150 GPLPSDQCFG 158
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038882163.1 | 2.5e-80 | 97.50 | uncharacterized protein LOC120073396 [Benincasa hispida] | [more] |
XP_008440700.1 | 5.6e-80 | 97.50 | PREDICTED: uncharacterized protein LOC103485040 [Cucumis melo] >KAA0036236.1 unc... | [more] |
XP_031744055.1 | 4.8e-79 | 96.25 | uncharacterized protein LOC101218070 [Cucumis sativus] >KGN48822.1 hypothetical ... | [more] |
XP_022950150.1 | 1.5e-77 | 93.75 | uncharacterized protein LOC111453326 [Cucurbita moschata] >XP_023544302.1 unchar... | [more] |
KAG6603983.1 | 2.0e-77 | 93.75 | hypothetical protein SDJN03_04592, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7T239 | 2.7e-80 | 97.50 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3B1A0 | 2.7e-80 | 97.50 | uncharacterized protein LOC103485040 OS=Cucumis melo OX=3656 GN=LOC103485040 PE=... | [more] |
A0A0A0KKC0 | 2.3e-79 | 96.25 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502600 PE=4 SV=1 | [more] |
A0A6J1GEW2 | 7.4e-78 | 93.75 | uncharacterized protein LOC111453326 OS=Cucurbita moschata OX=3662 GN=LOC1114533... | [more] |
A0A6J1IN27 | 3.7e-77 | 93.13 | uncharacterized protein LOC111478511 OS=Cucurbita maxima OX=3661 GN=LOC111478511... | [more] |
Match Name | E-value | Identity | Description | |
AT3G50685.1 | 3.9e-55 | 79.23 | unknown protein; Has 52 Blast hits to 46 proteins in 20 species: Archae - 0; Bac... | [more] |