CmUC01G014580 (gene) Watermelon (USVL531) v1

Overview
NameCmUC01G014580
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr01: 28001990 .. 28007723 (+)
RNA-Seq ExpressionCmUC01G014580
SyntenyCmUC01G014580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTCTTATAGGAGGCATTGCAGGAAGCGTTACTGGGAGCTTGCAAATTCCGGTGAATTTGGGGGAAAAAATTATCCATGATCTAGCTAATATTGCAGTGAGTCATTACGCCAAGGTGCAAGGGGTTGAAGTGAGCTTGGTAGGTGTGATAGATGCTACTGTTCAGGATGGGCCTAATGGAAAAATATATAGTCTTAAGTTGAAGTTGAAAATCGTTGCCGGTACTGCTCATCTTTATAAGATCTTTTTATTTGAATTGCTTGTTCCGTCCTTGGGCATTCCATACGTCGTGTCTATCAAATATCTCGAAGATGTCGGTATCTAAAAATCATCACACACACACACACACACACACACCATGTATGATGATGCTTCCTTTTGCATCATTCTCACCTTTTATCTATCAATAAATATATGAAAACCTACGTTGTTTGAAATATTTTTATACATATCCTTCCTTTGCCTCTTTCTCCATATTTGAAAATGCATGCCTAAGTTTCAATTCTTCTTTCCTACGTTTTAACACGTTTTTCCATTATATATACTTTTTCTAGACACGCTACTCACTCACACTCATGTGAATATATACATGATTAAAAATATTTGTTGATATATAATGAACTTACAATAATATTTTTAGTGAAAAAAGCAAGAATAATTAGGCTGCCTAGCTATGCATACATTATCAACTTCATTAACACATTTAAAGCAAAAGTTTGAAACTTCTCCCTGGGCAATTAATTTATTATCGACCAATTGTATAATTGAAGAACGTGGTACAACAATAACAGAATTACTAAATCAAAAAGAAAATATTATTGGGACTTTAACATATATTTAGTCTAAAATGACTACCTTATAAACAACATTATTCTTCTTAATTCTACAATTCTATCAAAGTAGCAAAAACATGAATCATTTGGTGATTATTTTTTTTTCTAAATAAGTAAAGAAAAATAATAGAGAAGTAAGAGAGAAGATAGAAAATTGCTCATATTGGGGAAAGTTGTACTACAATATATTCACTTGAGTCTAGGATCTCACTCTAATATTTCATTCATTCAACTCTACACTTAACAAAGTTTATTTTTAAAATAAAACTTGAACGAAAGGTCTTAAATGTTGTTTCATTTATAGAAAAGTTTTAGGGTTTAATTAAGCAATTATTAGTTAATATATCGATTGATCCCACTTGTAAAATTCTGACAGTATAAATAACACACTGAGCAAGTAACTTCTTATATGTATGAAAGATTTTCATTTCCCTCGAGTATGTGAAAATAAAGGGCTTACATATATGTTGGATGTGTAATATCATATAAGATGTATATCTAATAAGGACCTTTCTGGTGTCACTTCTAAAAGATTCAATCAAATAGTATTTATAATTACCGATCTCTACAACTATTATTACTAAAGCGTAGTACTAACGGCAAAACTGGAATGATTCGTAGGGAAGTGCGAAGATTAGTTTCTCAAAGTTAATTTTTTTTGCTAAAGCAAGCATGGGAAAATAAAATGCGGAATGTAAATTGCAAGAAAAGTAAAAGCAGCATATCCTAGTTTTTAGAGATGTCTACAATTGCTTGCTTGATTATAGATTCATCGAATTAGGTTTTATATTGTCTAAGCTTAGCCAACTCACCAAGAAAAGCTAAGTGAGAGTCCAATTTATCAAATTAGTCAATTTAATTAGATGAAAAAACATCCTAATGAATTTAGACTAACCGCATTACAAATGAGGATTACACAAAGGTGAATATCAACCAGGAATTGTCTAAATCAATATTCATCATGATTCTTCCTAGGTTGATAGAGCAATGCTTTTCATCATAGACAATAAATTACAAGTCTAACTAACATTTTGCTACATTTGATCAAATTACAATTTTATGTCACGTATTATAATTTATTGCCTAGCTAATGATCTTATATCCTCAAACAGAAATACAACCACAAACATGTAAAGACAGTAAAAGAATCCGAAGACAACAGAAACAATCAAGATGAAAAGTTTCGCACAAGGTTACAATAGGAGAAAACCTTAAAAACTAGGAATTGAGAATCCTTGCCTTCCCATTGAGATAATAAAGCTCAAACCCGCCATCTTCAACCCGCAACTACGGAGAAATATTGAATTCAAAACCTAACACTAATGTTGTAGATGGATAGAGGGGGAAAAACAAAGAAAACAAGTGTTCATTTACCCAAAACGGCCACTCGAATTCAAAGATATGACCTAAAAATCGATGAGTAGTTTTTATATGGCGAGATAGCACCGCGACGCTACGAAAAAATACAGAATTTGTATCCATGACGAGGTCCTTTAGGGGTGTTTTAGTTTTTTTGGCTTCCACTTGTCCTAATTACTTCGTTAGAACTCTAAATTGATCCGTTTTAGCTTCGTTTTCTTCCTAACGCTCAATTATATCTCCAAATTGCTCGATACCTACAAAATAACATATTTAAGCACATTAAATATTATCAACAGGCAAGATTAAAGATATTAAGATAGCACATTTAGGCACTACAACAAAATTAGGCTTTTATGACTAAAAGACAGTCATTACCACATTTCTTGACTTTTTTTTTTAGTCATTTAATCGCCCATCATCTAAAGAGTATAGATGACACATGAGAAATCAGCCATCATTGTTAGTTTCATGACTTTTAAACACAGTCAACAAAGAACATGTATTGACATTTATTATAAGTCATGGAAACCATTTTTCGTGACAATTTTCTACAGTCATTAAATAATGAAAATGTTGACTTTTTCTGTCAAATAAAGAGTTATCTTGACATTAAAATTCTGTCATCTAGCAACAAATAATGACACATCTAAAGTGTCAATAATACATTAATTATGACATTTTTTTAAGGTCATGGAATTACATACATTGTCACTTATTTATAGTCATAGAAGTCTGATAGATGACTTTTGTCAAATATCAAAGAAACCATTTCAATGATACACGTTATTACACCTATATTTCATACATGTTATTATACCCGTGTTTCCTTCAGTTTCAACACAAAATATGTACACAAACATAAAAAGTAACTTTCATATATAATAATATACTTTCTATCATTACTACAAGGAAACTAACAACAACAACACTAGTAACCATATTTTGGGTACATCATTTACAAATTTAGTATTTAGAACTAAATGTTGGCATAATCCCAAAAAAAATATATACAACACCTATTTAAATATCTTGGTTGGTGGGTTTCCTTACTTCAATGGCTTTGTCCAGGAACCTTGTAAAAAAAAAACATTCATTTCAGAATTTAACTCAATATATAAAGGTGAACAATAATAACAATATGCAGGTTATATATATGTTGATCGTACTGTGACAATATCATGTTGGTATATACATTTGCACTGAAAACCCCACTTTAGTCATACAAGTAAGCTTCAATGAACACTTTCAAACAAAAATTATTCATAGAATCACAATATAACCACATAAATACGCTCAAAATCACATTATAATCTCACTTTTCAACCTTAATAACATGGATAACCTCCAAATTTAACTTATACACTAGTCTACTAGAAAGAATAAGAGTTAATTGAAAAATTTCTTCGTGTAGGGGCGGGGGAACAAGTGAAACATAGTATAGTAGGAGCAAAACAAATATATAATTATTGTAACTTGTCCAACCTTTTAGGAGTATAACTACTAAAAAGTAGAAATACTCATACATTAGTCTATTAGAAAGAATAAGGGTTAAAAGAAAAACTTCTTCATTTAGGGAAGGACAAGTGAAACATAATACAAAAAATATTTATCACAAAAAAAAAAAAAGATATCTCCTTAGAACTCAAGCACATTAATCCAATACGAGCAAAACAAATATATAACTTAAATACTCTCAAACCAACATAAAAAGTATCTAAAAGTTTTTCAAGAAACAATTTAACTCCCCAAACAACCAAAATAGTTCATATGTGCACTTTGATTATCAAAACCAATTAAAAAGTACGTAAAAAATGTCTAAGTGACACATTATCAAAATCAACTCAAGCACATAATAAATGGATGAATTAGCTACCATAATTGCAGGATAGCCACACATAATATACATGCATTTATAAACAGAGTTTGAACTTCTAAAAAATACCTAAGTATTTTAAGGTCTATCCCCTTCCTGTTCTTGCCCCAACAATTTTTTAGTGACCTCTAAACTATGACTTCTAAACTCACAACTATGACCTCTAAACTCAAAACCAACCAAAGAATGGCTAAAAAGTGTCTAAATAACACTTTGACTCCAAAAACAAGTCCAAAATGCACAACTATGACCTCTAAACTCAAAACCAACCAAAGAATGGCTAAAAAGTGTCTAAATGACACTTTGACTCCAAAAACAACTCCATAATGCACAACTATGACCTCTAAACTGAAAACCAACCAAAGAATGACTAAAAAGTGTCTAGATGACACTTTGACTCCAAAAACAACTCCATAAATGCATGAATTGGCTACCGTAACTGCAGGATAGCCACAACACATTATAACTTAAACATATAAAAAAAGGTACTAAATGTATGAACTGGCTACCGTAACTGCAGGATAGCCACAACCATAATTTTGAACTTTAATTTAAAAATAAATAAATACCTAAGAAGTTAAAGGTCCATCGCCTCCATGTCCTTGCCCCAACAATTTTTGAACATCGGTCCATCTATCTTCCTATTTGACAAGTTGATTCATTAACTTCTCATTTTGCTCCACCATCTTTGCGTACTTTTCAATGAGCTCATATCCTAGATAGGTTACTATCATAGCTTGAACTCATTCTCCTTAAATCTAGTACTAAGAAAAATTAGGAATGTTATTTAGGTCGTAATCGTAGTCGAGGCATAGTTATAAATTTTTTAACAAGAAACAAATAGTAGCATGATTGTAATTGTAATATTTCAAGGAAAATACTCACTTGTATAGCCTTCCTCGAGGGCTTTCTCTATCACACACACGGGACTTATTCACAATAATCTAACTAGAATCCAAATCCCCAAATTCCCTTTATTAATAACCACTCTACTGTACTAATATCCTAATAGCATTCCCAATGCTAGGTTGCTAGATGACTAACGGGTTCATAGGCTGGTTTGGATTGGATTGAAAAATACTTCAAATGGGTTGTTCCTGTTCCAATTTTCATTTTGTCCTAGCAAAGTAACCTTTTCACAACTTTTTCCACTTTATTATGAAGAAGAATATCAACTTTCCTACATCAAAAGACGTAGCTCTTTAAAATATTTAACTAAGAACGTTCCAACACTTCAAAATAATTGATTCTCTGGACATGAAAATAAATCGATGAAACATCAATTCCAAAATCATCACAGTTACAAATACGTTAAACGTTAACAATTATTGCAACAAACGATGTCGTGGATCAAAATTAGATGTCAAAATACACATTAAGAATAGAATTATCTAACATGGCCAAATAACACTCACCACTTTTCAAATCGCCAAAGAAATAAAGAATTATCAACAGATGCCCAAGCTCTTCGTATTTCAGGAAATATTCCACATAAGGCAGTTCCTTCCCCTCCAGCAGCATTATATCTTTCTATAAGCACTGGAGGTAACTCCCAAGTATCCACCACTTCCACTAGAGGAGGCAGCAACACCGGCGTCTTGAGGCAGCAGCAGCACCGGCGTCTGGCGGCAGCAACAGGCGGCGTCGGGCAGAGGAGCGGTTGA

mRNA sequence

ATGACTCTTATAGGAGGCATTGCAGGAAGCGTTACTGGGAGCTTGCAAATTCCGGTGAATTTGGGGGAAAAAATTATCCATGATCTAGCTAATATTGCAGTGAGTCATTACGCCAAGGTGCAAGGGGTTGAAGTGAGCTTGGTAGGTGTGATAGATGCTACTGTTCAGGATGGGCCTAATGGAAAAATATATAGTCTTAAGTTGAAGTTGAAAATCGTTGCCGGTACTGCTCATCTTTATAAGATCTTTTTATTTGAATTGCTTGTTCCGTCCTTGGGCATTCCATACGTCGTGTCTATCAAATATCTCGAAGATGTCGGAAATATTCCACATAAGGCAGTTCCTTCCCCTCCAGCAGCATTATATCTTTCTATAAGCACTGGAGGTAACTCCCAAGTATCCACCACTTCCACTAGAGGAGGCAGCAACACCGGCGTCTTGAGGCAGCAGCAGCACCGGCGTCTGGCGGCAGCAACAGGCGGCGTCGGGCAGAGGAGCGGTTGA

Coding sequence (CDS)

ATGACTCTTATAGGAGGCATTGCAGGAAGCGTTACTGGGAGCTTGCAAATTCCGGTGAATTTGGGGGAAAAAATTATCCATGATCTAGCTAATATTGCAGTGAGTCATTACGCCAAGGTGCAAGGGGTTGAAGTGAGCTTGGTAGGTGTGATAGATGCTACTGTTCAGGATGGGCCTAATGGAAAAATATATAGTCTTAAGTTGAAGTTGAAAATCGTTGCCGGTACTGCTCATCTTTATAAGATCTTTTTATTTGAATTGCTTGTTCCGTCCTTGGGCATTCCATACGTCGTGTCTATCAAATATCTCGAAGATGTCGGAAATATTCCACATAAGGCAGTTCCTTCCCCTCCAGCAGCATTATATCTTTCTATAAGCACTGGAGGTAACTCCCAAGTATCCACCACTTCCACTAGAGGAGGCAGCAACACCGGCGTCTTGAGGCAGCAGCAGCACCGGCGTCTGGCGGCAGCAACAGGCGGCGTCGGGCAGAGGAGCGGTTGA

Protein sequence

MTLIGGIAGSVTGSLQIPVNLGEKIIHDLANIAVSHYAKVQGVEVSLVGVIDATVQDGPNGKIYSLKLKLKIVAGTAHLYKIFLFELLVPSLGIPYVVSIKYLEDVGNIPHKAVPSPPAALYLSISTGGNSQVSTTSTRGGSNTGVLRQQQHRRLAAATGGVGQRSG
Homology
[Close]
BLAST of CmUC01G014580 vs. NCBI nr
Match: KAE8647454.1 (hypothetical protein Csa_003781 [Cucumis sativus])

HSP 1 Score: 68.9 bits (167), Expect = 4.6e-08
Identity = 41/107 (38.32%), Postives = 63/107 (58.88%), Query Frame = 0 

Query: 1   MTLIGGIAGSVTGSLQIPVNLGEKIIHD-LANIAVSHYAKVQGVEVSLVGVIDATVQDGP 60
           MTL  GI+G   G   +P++L +  + D L    + H   V  ++ +  G+ID  ++ G 
Sbjct: 1   MTLGIGISG---GLQIVPLDLSDNTLCDLLVQHVMKHCQSVLQIDATFEGLIDGKIEIGL 60

Query: 61  NGKIYSLKLKLKIVAGTAHLYKIFLFELLVPSLGIPYVVSIKYLEDV 107
           NGK Y+LKLK+K+  G A++ KI L  L  P +G P VVS +YLE++
Sbjct: 61  NGKTYTLKLKIKVRIGDAYVVKIVLVRLFFPFVGYPSVVSFEYLEEI 104

[Close]
BLAST of CmUC01G014580 vs. NCBI nr
Match: KAA0040704.1 (hypothetical protein E6C27_scaffold529G00200 [Cucumis melo var. makuwa] >TYK00712.1 hypothetical protein E5676_scaffold75352G00010 [Cucumis melo var. makuwa] >TYK14273.1 hypothetical protein E5676_scaffold4170G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 65.1 bits (157), Expect = 6.6e-07
Identity = 32/98 (32.65%), Postives = 59/98 (60.20%), Query Frame = 0 

Query: 10  SVTGSLQIPVNLGEKIIHDLANIAVSHYAKVQGVEVSLVGVIDATVQDGPNGKIYSLKLK 69
           +++G LQI   L   ++     + ++H   + G++    G+ID   + GPNGK Y+LKLK
Sbjct: 6   NISGGLQIVNPLDSLLLEVCVPLVLNHCRAILGIDAQFEGIIDGHFEVGPNGKTYTLKLK 65

Query: 70  LKIVAGTAHLYKIFLFELLVPSLGIP-YVVSIKYLEDV 107
           LK+  G A++ KI + +   P +G+P  ++S +Y+E++
Sbjct: 66  LKVRIGDAYVIKIVVVKFFWPFIGLPTNLLSFEYVEEI 103

[Close]
BLAST of CmUC01G014580 vs. ExPASy TrEMBL
Match: A0A0A0KFK8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483240 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.3e-08
Identity = 41/107 (38.32%), Postives = 64/107 (59.81%), Query Frame = 0 

Query: 1   MTLIGGIAGSVTGSLQIPVNLGEKIIHD-LANIAVSHYAKVQGVEVSLVGVIDATVQDGP 60
           MTL  GI+G   G   +P++L +  + D L    + H   V  ++ +  G+ID  ++ G 
Sbjct: 1   MTLGIGISG---GLQIVPLDLSDNTLCDLLVQHVMKHCQSVLQIDATFEGLIDGKIEIGL 60

Query: 61  NGKIYSLKLKLKIVAGTAHLYKIFLFELLVPSLGIPYVVSIKYLEDV 107
           NGK Y+LKLK+K+  G A++ KI L +L  P +G P VVS +YLE++
Sbjct: 61  NGKTYTLKLKIKVRIGDAYVVKIVLVKLFFPFVGFPSVVSFEYLEEI 104

[Close]
BLAST of CmUC01G014580 vs. ExPASy TrEMBL
Match: A0A0A0KKQ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483230 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.3e-08
Identity = 42/107 (39.25%), Postives = 62/107 (57.94%), Query Frame = 0 

Query: 1   MTLIGGIAGSVTGSLQIPVNLGEKIIHD-LANIAVSHYAKVQGVEVSLVGVIDATVQDGP 60
           MTL  GI G   G   +P++L +  + D L    + H   V  ++ +  G ID +++ G 
Sbjct: 1   MTLGIGIGG---GLQIVPLDLSDNTLCDLLVQHVIKHCQSVLQIDATFEGFIDGSIEIGL 60

Query: 61  NGKIYSLKLKLKIVAGTAHLYKIFLFELLVPSLGIPYVVSIKYLEDV 107
           NGK Y LKLKLK+  G A++ KI L +L  P +G P VVS +YLE++
Sbjct: 61  NGKTYILKLKLKVRIGDAYVVKIVLVKLFFPFVGFPSVVSFEYLEEI 104

[Close]
BLAST of CmUC01G014580 vs. ExPASy TrEMBL
Match: A0A0A0KFL5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483250 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 8.5e-08
Identity = 38/96 (39.58%), Postives = 58/96 (60.42%), Query Frame = 0 

Query: 11  VTGSLQI-PVNLGEKIIHD-LANIAVSHYAKVQGVEVSLVGVIDATVQDGPNGKIYSLKL 70
           + GSLQI P++L +  + D L    + H   V  ++ +  G ID +++ G NGK YS KL
Sbjct: 7   IGGSLQIVPMDLSDNTLCDLLVQHVMKHCQTVLQIDATYEGFIDGSIEIGMNGKTYSFKL 66

Query: 71  KLKIVAGTAHLYKIFLFELLVPSLGIPYVVSIKYLE 105
           KLKI  G A++ K  L ++  P +G+P +VS +YLE
Sbjct: 67  KLKIKVGDAYVIKPVLVKIFFPFIGLPSIVSFEYLE 102

[Close]
BLAST of CmUC01G014580 vs. ExPASy TrEMBL
Match: A0A5D3BPM4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4170G00020 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 3.2e-07
Identity = 32/98 (32.65%), Postives = 59/98 (60.20%), Query Frame = 0 

Query: 10  SVTGSLQIPVNLGEKIIHDLANIAVSHYAKVQGVEVSLVGVIDATVQDGPNGKIYSLKLK 69
           +++G LQI   L   ++     + ++H   + G++    G+ID   + GPNGK Y+LKLK
Sbjct: 6   NISGGLQIVNPLDSLLLEVCVPLVLNHCRAILGIDAQFEGIIDGHFEVGPNGKTYTLKLK 65

Query: 70  LKIVAGTAHLYKIFLFELLVPSLGIP-YVVSIKYLEDV 107
           LK+  G A++ KI + +   P +G+P  ++S +Y+E++
Sbjct: 66  LKVRIGDAYVIKIVVVKFFWPFIGLPTNLLSFEYVEEI 103

The following BLAST results are available for this feature:
BLAST of CmUC01G014580 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647454.14.6e-0838.32hypothetical protein Csa_003781 [Cucumis sativus][more]
KAA0040704.16.6e-0732.65hypothetical protein E6C27_scaffold529G00200 [Cucumis melo var. makuwa] >TYK0071... [more]
BLAST of CmUC01G014580 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CmUC01G014580 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFK81.3e-0838.32Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483240 PE=4 SV=1[more]
A0A0A0KKQ81.3e-0839.25Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483230 PE=4 SV=1[more]
A0A0A0KFL58.5e-0839.58Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483250 PE=4 SV=1[more]
A0A5D3BPM43.2e-0732.65Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of CmUC01G014580 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC01G014580.1CmUC01G014580.1mRNA