CmUC01G014290 (gene) Watermelon (USVL531) v1

Overview
NameCmUC01G014290
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr01: 27728035 .. 27728484 (-)
RNA-Seq ExpressionCmUC01G014290
SyntenyCmUC01G014290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCCTGGTAAAACTGGCTCAAATTCACCGTACTGAACCGCTGATCTTCGTAGAAGGCGTTAACCTCAATAGCGTCGTAGTAGATCCCGATCCTCCGATTCGGATTTCTGGCGGTGATATTCAGAGCGAGATTGTAATGGAGGTTGTTATTGTTAGGCGTAGTGAGATTGAACTGCGTGAGAGAGGCGTCGGTGGCGTGGAATTGGAGGAGATTTGGACGGAAGATGAGCCACAAGAGGAAGACAGCAATGCCGAGGACGATGACGATGGTGATGATGATTTGACAGATGAGGTTGAGGATACAGCCGCAGCAGCAGTTGCAGAGGCAGCCGAGACAGCCGCAACAGCCGCAGCCGCCGTCGCCGCGGCCAGGGCGGTGGTAGGACTTGGAGGAGGGAGGAATGGAAGGGCCATAGTAAGCTCCGTTGAGATGGGACGCCATTGTTGA

mRNA sequence

ATGCCCCTGGTAAAACTGGCTCAAATTCACCGTACTGAACCGCTGATCTTCGTAGAAGGCGTTAACCTCAATAGCGTCGTAGTAGATCCCGATCCTCCGATTCGGATTTCTGGCGGTGATATTCAGAGCGAGATTGTAATGGAGGTTGTTATTGTTAGGCGTAGTGAGATTGAACTGCGTGAGAGAGGCGTCGGTGGCGTGGAATTGGAGGAGATTTGGACGGAAGATGAGCCACAAGAGGAAGACAGCAATGCCGAGGACGATGACGATGGTGATGATGATTTGACAGATGAGGTTGAGGATACAGCCGCAGCAGCAGTTGCAGAGGCAGCCGAGACAGCCGCAACAGCCGCAGCCGCCGTCGCCGCGGCCAGGGCGGTGGTAGGACTTGGAGGAGGGAGGAATGGAAGGGCCATAGTAAGCTCCGTTGAGATGGGACGCCATTGTTGA

Coding sequence (CDS)

ATGCCCCTGGTAAAACTGGCTCAAATTCACCGTACTGAACCGCTGATCTTCGTAGAAGGCGTTAACCTCAATAGCGTCGTAGTAGATCCCGATCCTCCGATTCGGATTTCTGGCGGTGATATTCAGAGCGAGATTGTAATGGAGGTTGTTATTGTTAGGCGTAGTGAGATTGAACTGCGTGAGAGAGGCGTCGGTGGCGTGGAATTGGAGGAGATTTGGACGGAAGATGAGCCACAAGAGGAAGACAGCAATGCCGAGGACGATGACGATGGTGATGATGATTTGACAGATGAGGTTGAGGATACAGCCGCAGCAGCAGTTGCAGAGGCAGCCGAGACAGCCGCAACAGCCGCAGCCGCCGTCGCCGCGGCCAGGGCGGTGGTAGGACTTGGAGGAGGGAGGAATGGAAGGGCCATAGTAAGCTCCGTTGAGATGGGACGCCATTGTTGA

Protein sequence

MPLVKLAQIHRTEPLIFVEGVNLNSVVVDPDPPIRISGGDIQSEIVMEVVIVRRSEIELRERGVGGVELEEIWTEDEPQEEDSNAEDDDDGDDDLTDEVEDTAAAAVAEAAETAATAAAAVAAARAVVGLGGGRNGRAIVSSVEMGRHC
Homology
BLAST of CmUC01G014290 vs. NCBI nr
Match: KAA8516802.1 (hypothetical protein F0562_017088 [Nyssa sinensis])

HSP 1 Score: 70.1 bits (170), Expect = 1.8e-08
Identity = 59/142 (41.55%), Postives = 81/142 (57.04%), Query Frame = 0

Query: 3   LVKLAQIHRTEPLIFVEGVNLNSVVVDPDPPIRISGGDIQSEIVMEVVIVRRSEIELRER 62
           L+K  Q    E L+FVE     ++VV  D  + +  G ++ E+V+E V     E+EL E 
Sbjct: 18  LIKWLQGGDGEALVFVESSGFYAIVVYADALVWVPDGHVEGEVVVEGV-GGGGEVELSEG 77

Query: 63  GVGGVELEEIWTEDEPQEEDSNAEDDDDGDDDLTDEVEDTAAAAVAEAAETAATAAAAVA 122
            VG ++L  +  EDEP++ED NA D DDGDDDL +EVEDTA          AATAA A  
Sbjct: 78  SVGDMKLHLVGAEDEPEDEDGNAYDGDDGDDDLEEEVEDTAT--------EAATAAIAAI 137

Query: 123 AARAVVGLGGGRNGRAIVSSVE 145
           AA AVVG  G +    +V+ ++
Sbjct: 138 AAGAVVGFPGIQRSSVLVTLIK 150

BLAST of CmUC01G014290 vs. NCBI nr
Match: CAD1817939.1 (unnamed protein product [Ananas comosus var. bracteatus])

HSP 1 Score: 65.9 bits (159), Expect = 3.5e-07
Identity = 56/130 (43.08%), Postives = 74/130 (56.92%), Query Frame = 0

Query: 3   LVKLAQIHRTEPLIFVEGVNLNSVVVDPDPPIRISGGDIQSEIVMEVVIVRRSEIELRER 62
           LV+  Q    E +  VE +  + VVVD DP + ++ GD+  E+  EV  VR  E ELRER
Sbjct: 58  LVEGRQQLEAEAVAVVERLAFDVVVVDADPLVAVADGDVDGEV--EVEGVRGGEGELRER 117

Query: 63  GVGGVELEEIWTEDEPQEEDSNAEDDDDGDDDLTDEVEDTAAAAVAEAAETAATAAAAVA 122
           G  GV  E +  +DEP +ED +AEDDDDG+D+L +  E        EA    A  AAA A
Sbjct: 118 GGLGVGFEAVGADDEPDDEDDDAEDDDDGEDELEEGAE--------EAGAGVAAGAAADA 177

Query: 123 AARAVVGLGG 133
           A R + G+GG
Sbjct: 178 AVRVLRGIGG 177

BLAST of CmUC01G014290 vs. NCBI nr
Match: KAF5473491.1 (hypothetical protein F2P56_010099 [Juglans regia])

HSP 1 Score: 62.8 bits (151), Expect = 2.9e-06
Identity = 55/145 (37.93%), Postives = 85/145 (58.62%), Query Frame = 0

Query: 1   MPLVKLAQIHRTEPLIFVEGVNLNSVVVDPDPPIRISGGDIQSEIVMEVVIVRRSEIELR 60
           M LVK  + HRT+PLIF  G   +++VV  D  + +S  D++ ++V+E VIV   E+EL 
Sbjct: 1   MSLVKWGKRHRTKPLIFEIGPGFDAIVVYADLFVGVSNVDVEGKVVVERVIV-GGEVELG 60

Query: 61  ERGVGGVELEEIWTEDEPQEEDSNAEDDDDGDDDLTDEVEDTAAAAVAEAAETAATAAAA 120
           +RGVG ++L+ +  +DEP++ED  A +D D  ++L  +             E A TAAA 
Sbjct: 61  KRGVGDMKLDPVGADDEPEDEDRKAYNDSDAYNELEKQ------------TEKAPTAAAT 120

Query: 121 VAAARAVVGLGGGRNGRAIVSSVEM 146
            AA+ AV+      N RA+V SV++
Sbjct: 121 TAASVAVIVSIRRWNCRAVVCSVQV 132

BLAST of CmUC01G014290 vs. NCBI nr
Match: KCW49000.1 (hypothetical protein EUGRSUZ_K02613 [Eucalyptus grandis])

HSP 1 Score: 61.2 bits (147), Expect = 8.6e-06
Identity = 50/118 (42.37%), Postives = 72/118 (61.02%), Query Frame = 0

Query: 29  DPDPPIRISGGDIQSEIVMEVVIVRRSEIELRERGVGGVELEEIWTEDEPQEEDSNAEDD 88
           DPD  +R+  G+++ E+V E   V   E+EL E  VG VEL+E+  EDEP++E    + D
Sbjct: 4   DPDAAVRVPDGEVELEVVAEG--VGGGEVELGELRVGDVELDEVGAEDEPEDEGEETDGD 63

Query: 89  DDGDDDLTDEVEDTAAAAVAEAAETAATAAAAVAAARAVVGLGGGRNGRAIVSSVEMG 147
             G+D++ DE+E+ AA A          A AA AAA AVVG+  G +G A+V +VE+G
Sbjct: 64  HHGEDEVEDELEEAAATA----------ADAAPAAAGAVVGVLLGGHGGAVVGAVEVG 109

BLAST of CmUC01G014290 vs. NCBI nr
Match: KAE8021745.1 (hypothetical protein FH972_007610 [Carpinus fangiana])

HSP 1 Score: 56.2 bits (134), Expect = 2.8e-04
Identity = 34/83 (40.96%), Postives = 53/83 (63.86%), Query Frame = 0

Query: 1   MPLVKLAQIHRTEPLIFVEGVNLNSVVVDPDPPIRISGGDIQSEIVMEVVIVRRSEIELR 60
           +PLVK  +    E L  V  V+L++VVVD D  + +  GD++ ++V+E V V   E+EL 
Sbjct: 73  VPLVKQRRNLDVESLALVVSVDLDAVVVDADALVGVPDGDVEGKVVVERV-VGGGEVELG 132

Query: 61  ERGVGGVELEEIWTEDEPQEEDS 84
           E+GVG  EL  +  E+EP++ED+
Sbjct: 133 EQGVGDAELHLVGAEEEPEDEDN 154

BLAST of CmUC01G014290 vs. ExPASy TrEMBL
Match: A0A5J4ZGS4 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_017088 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 8.9e-09
Identity = 59/142 (41.55%), Postives = 81/142 (57.04%), Query Frame = 0

Query: 3   LVKLAQIHRTEPLIFVEGVNLNSVVVDPDPPIRISGGDIQSEIVMEVVIVRRSEIELRER 62
           L+K  Q    E L+FVE     ++VV  D  + +  G ++ E+V+E V     E+EL E 
Sbjct: 18  LIKWLQGGDGEALVFVESSGFYAIVVYADALVWVPDGHVEGEVVVEGV-GGGGEVELSEG 77

Query: 63  GVGGVELEEIWTEDEPQEEDSNAEDDDDGDDDLTDEVEDTAAAAVAEAAETAATAAAAVA 122
            VG ++L  +  EDEP++ED NA D DDGDDDL +EVEDTA          AATAA A  
Sbjct: 78  SVGDMKLHLVGAEDEPEDEDGNAYDGDDGDDDLEEEVEDTAT--------EAATAAIAAI 137

Query: 123 AARAVVGLGGGRNGRAIVSSVE 145
           AA AVVG  G +    +V+ ++
Sbjct: 138 AAGAVVGFPGIQRSSVLVTLIK 150

BLAST of CmUC01G014290 vs. ExPASy TrEMBL
Match: A0A6V7NH64 (Uncharacterized protein OS=Ananas comosus var. bracteatus OX=296719 GN=CB5_LOCUS1150 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.7e-07
Identity = 56/130 (43.08%), Postives = 74/130 (56.92%), Query Frame = 0

Query: 3   LVKLAQIHRTEPLIFVEGVNLNSVVVDPDPPIRISGGDIQSEIVMEVVIVRRSEIELRER 62
           LV+  Q    E +  VE +  + VVVD DP + ++ GD+  E+  EV  VR  E ELRER
Sbjct: 58  LVEGRQQLEAEAVAVVERLAFDVVVVDADPLVAVADGDVDGEV--EVEGVRGGEGELRER 117

Query: 63  GVGGVELEEIWTEDEPQEEDSNAEDDDDGDDDLTDEVEDTAAAAVAEAAETAATAAAAVA 122
           G  GV  E +  +DEP +ED +AEDDDDG+D+L +  E        EA    A  AAA A
Sbjct: 118 GGLGVGFEAVGADDEPDDEDDDAEDDDDGEDELEEGAE--------EAGAGVAAGAAADA 177

Query: 123 AARAVVGLGG 133
           A R + G+GG
Sbjct: 178 AVRVLRGIGG 177

BLAST of CmUC01G014290 vs. ExPASy TrEMBL
Match: A0A059A6N3 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_K02613 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 4.1e-06
Identity = 50/118 (42.37%), Postives = 72/118 (61.02%), Query Frame = 0

Query: 29  DPDPPIRISGGDIQSEIVMEVVIVRRSEIELRERGVGGVELEEIWTEDEPQEEDSNAEDD 88
           DPD  +R+  G+++ E+V E   V   E+EL E  VG VEL+E+  EDEP++E    + D
Sbjct: 4   DPDAAVRVPDGEVELEVVAEG--VGGGEVELGELRVGDVELDEVGAEDEPEDEGEETDGD 63

Query: 89  DDGDDDLTDEVEDTAAAAVAEAAETAATAAAAVAAARAVVGLGGGRNGRAIVSSVEMG 147
             G+D++ DE+E+ AA A          A AA AAA AVVG+  G +G A+V +VE+G
Sbjct: 64  HHGEDEVEDELEEAAATA----------ADAAPAAAGAVVGVLLGGHGGAVVGAVEVG 109

BLAST of CmUC01G014290 vs. ExPASy TrEMBL
Match: A0A5N6QYV1 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_007610 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.3e-04
Identity = 34/83 (40.96%), Postives = 53/83 (63.86%), Query Frame = 0

Query: 1   MPLVKLAQIHRTEPLIFVEGVNLNSVVVDPDPPIRISGGDIQSEIVMEVVIVRRSEIELR 60
           +PLVK  +    E L  V  V+L++VVVD D  + +  GD++ ++V+E V V   E+EL 
Sbjct: 73  VPLVKQRRNLDVESLALVVSVDLDAVVVDADALVGVPDGDVEGKVVVERV-VGGGEVELG 132

Query: 61  ERGVGGVELEEIWTEDEPQEEDS 84
           E+GVG  EL  +  E+EP++ED+
Sbjct: 133 EQGVGDAELHLVGAEEEPEDEDN 154

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA8516802.11.8e-0841.55hypothetical protein F0562_017088 [Nyssa sinensis][more]
CAD1817939.13.5e-0743.08unnamed protein product [Ananas comosus var. bracteatus][more]
KAF5473491.12.9e-0637.93hypothetical protein F2P56_010099 [Juglans regia][more]
KCW49000.18.6e-0642.37hypothetical protein EUGRSUZ_K02613 [Eucalyptus grandis][more]
KAE8021745.12.8e-0440.96hypothetical protein FH972_007610 [Carpinus fangiana][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5J4ZGS48.9e-0941.55Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_017088 PE=4 SV=1[more]
A0A6V7NH641.7e-0743.08Uncharacterized protein OS=Ananas comosus var. bracteatus OX=296719 GN=CB5_LOCUS... [more]
A0A059A6N34.1e-0642.37Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_K02613 PE=4 SV... [more]
A0A5N6QYV11.3e-0440.96Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_007610 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..96
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..96

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC01G014290.1CmUC01G014290.1mRNA