CmUC01G013060 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC01G013060
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	50S ribosomal protein L19, chloroplastic-like
Location	CmU531Chr01: 25632011 .. 25636589 (+)
RNA-Seq Expression	CmUC01G013060
Synteny	CmUC01G013060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCATCTTCACGCCACTTCTTCTTCTTCACGCCGTCTCCTCCTCTGTTTCGGCAGCTCGGTGTCGCCGCCGCCGTCGTCTTTCTTCCGCTCGTTCCGTAGCAGGCTCTCTCCTAGCGGTTTTGCACTGGTTTCTTACTACCTCGTTGTTACTGTTATCTCCCAACTTCCATCTACATCTTTCTTCTCACTTGAAAAACACAAATTTGAACTTGTCTAAAGAAACAATGGTGGAGTTATTTGATTTTTCTTAATAACAAAATTGAGACGTGGTTTTTGTTTGGCTATTCTGATTCGGACATGAATCAGTCATCCAATTCTCTACTTTTTTTTTCTTCTTTTTTGGTTTGGTTATTCGAATTCCGTGTTTACTGGTGATCTAGAATAAGCTCTGACATTTCCAGCAATCTTGATCAGTGTAATGTATATTTAAGCTACATTATTTATACGCTGCTTCACTACCATGTTCCTTCTTACCTGCTTGTTTTGGAACAATTCTATGGAGTTTCTTTTGTATGCCTCAACGCTCATGGACTCTCTCTGGGTTATGCAGCTGGAAATCTAGAGCGAAAATGCAAGGTTTTCGCAGAATCAATCAATTGGTACGAAGGCAGAGTCCTGATGCTCATTTCAAATTGATTAGAGGTTATCCTCTGAATGGGGATGCTGGCTGTAGCTGCTCGGCTCCGACGTCGATGGAAAATAGTTTTACTATTCCTTGTCTTTTTGGGAATTCATATGGGTCTTTGAGCGGTTCCCTCTTGAGCTCTTTCTCGAGGTTCGGCAATCAATATCCGGAAGCCTTCGTATGTATTTCTGTTCGTCTAACTATTTTTTTACATTATGGTCGTTTACTAGTATGATTTGTTCTTGTGTTGTTTTCAGAGGTTCTATAACTATTCACTAAATCTACTTTGGTTTTATGCAATTGTTTTCGGAGGTTCTATAACTATTCACTAAATCTACTTTGGTTTTATACATATATAATTGCGACATTTATTCTAGTTCGAATTGGAGGCTTTATGACTTCATTTATGCTTAACGTTTTAGTTCATAAGCAGTGAAACAAGTAAATATCACAATATCGGTCTTGGCCAGCACTCTTGATTGGTGGTAGGGAAATATGTATAGTTTCTTATCAATTGTGTACGTTATGCACGTGTCCCTAATACTGACCAGACATGATTTGTGTTAAATGTCTTATTGCTATAAGGTAACGTAGAGTATGAGTACATCAGCTAGAACTGACTCCTAGTTTAATTATGGATCTGAGCCATTGTTGTGGGTGTGCCGGTTTGCAAAATACCCTTGGTATCGGTGGCAAATTTTTATTTGGAGTTAGTGGGGGATGGGTGTTCTTTGTTGGTGGAAAAGTGGTTTTGCACTCCCCTTCCTTTTAGAGAGAAGAGTGTTGTTGCAAGCGAGCTTCTTTGCTATTTTGTGGAGTATATTGGTTGGAGTGTAATCGTATTTGAGGTGGAGAGAAATCTAGAGAGGAGGTTTGGGAGTTGGTGAGGTTAATCCTTCCATTTGGGTGTCGGTCACTTGATTGTTTTGTACTTTTGATATTGGTCTTGTTCTTTTGGATTGGATTCTTTTTTGTAGTTAGTGTTAGACTCTTGTTTTTTGAAGGCTTGCTTCTTTTCTTTCTTGTATTCTTTCATTTTTCCAACGTAAGTTCGGTTTTCTTGTCAATTTTTGTTTTCTTTTTTGAAAAGCACTTTGCTATTGTCTGACTCATAGTTATTATGTATTCTATTTCCCCTTTCAACAAATTAAGTATAGAGAACCACATATTTATTTTGTAATTAGTCTGTCTGAAATGTAATTAGCTTGCATCAAGCTGATATAACTTTTAAGGGGAAAAAATGTGGTTATAGTTCTTTTCTTCTATGATACTTGCTAATTGGAGGGCCTTTCTGTAATTTCCTTGGCATCTATGGAGATTGGTTATCTTCCTCTTATTACCTCTTTTCTTTCAATATTCCTGCAAAACAGAAAAGCTGTCAACTATCCTAGTGAGAAATGTTTTAAGAAATTGTGTATATGAACTTTCTGTTGGTTTATGGGTACCATTTATTTAAGAGTCTATTTTGTAATTTATCCCTTTGTAACAATTTATACAACTATTTAGCAGAAAAATACGAGCTCCCAAATGGGATTTGTGCCTTCGAGAAAGCATGTATCTTCAACTTGTTCAGCATTCCAAAGTTCTTGGCCACATATATTTCAGTTGGCAGAAATTGCAGCTCCTTTTTCTAGCAGGGGCATTGCTACGACAAGCTCGATGGAATCATCTCTACAAGGATCCACTGCAGTTGATTCTGATATAACTCCTCGTATCAAATTTAAGAGGCTTGATAAAACCTCAAGACACATAATGCAGGTATTCACATTTCTGAGTATTGTTGGAAAAGTAGTTTCATTTCATCTTCCATTTGTTTGCTTTCAATATATTGCTTTCTTTTCCCTACAGATTTTAGATAAGGAAGCTGTTGAGGAGGCAAAAGCACAGAGAGAAATTCCAGATATAAAGCCAGGCTATATTGTGCAGCTCAAAGTGGTAAAGTTCAGTCAAATTATTATAATGTTGCATTACTTTCAGATAATGTTCTTATTCTAAAAAGCAGTTGTAGATGAGGTTATGGAACAGTTTTTTGGCTTTTCTTGTTATGTGTGAACAGGAAGTACCTGAGAACAAGCGGCGTGTCTCAACATTAAAAGGTATTGTAATAGCCAGAAGAAATGCTGGTCTCAACACAACTTTTAGATTAAGGAGGCTAGTTGCTGGTGTTGGGATTGAGTCCCTCTTCCCTCTGTAAGTAATGGTGAATTTTTACTATAATTATTTTCTGCAAAAGTTACATTCCCAATTTCATTGTCTTTGTCCCTGCTCACCTTTGATGAATAACAGGAGAAGCATATTCTGCTTATCTAGGATAGGACACAGATACATCTGAACACGTCTTAGACACAGATATATCTAGACATCCTCTAGACATGTGTTCGACACTCTAAAAAATGTGTCTAGATTAATTTTTCTCTTCTAAGTTTCGACACGACATTGGAAAATATTTAACCTAAAAGTTAGGGGAAAAATAGTGATTTCTAATAGATCGAATTCTTATATATTGAATTATTTGATTAATCCTATTAGGATTGACATTTCTTCCTTTAGTCATAGCCATCTAAATCTTCCTATATCTCCTAAGATTTCAGATCTCCTTACTTGACTTGACTTTGTATGTTTTTATGAAGTAAATTTTGTTTATATGTTAGATTTATATATTTTTATTTATAAAGAAGTGTTCATATTTCATGCATTTTATTTTTAAAAAATGTGTCCCTGCTTCTTTTTTTAGAAATTGATGTGTCACCATGCCCATGTCGTGTCTACGCTTCTTAGGTGTTTTTTTTTTTTTTTTGTTGTTCCGCTTTAGATTAGGTCAAGGAATGTTAAGGGATTTGAAGAATTTTATCAAAAGATTAACCTTAAGGTGCAAGCCTTTATGAGTTTCGAGTCTTTATTGAATTTAGAGAGAAACTGAGCCTTGTGTTGTAAATTTTGCGAGTTCATATAACATCTTATACAAATAAACCACTATAGGCCTCTAGTTCCATGAGTGGTCTAGTAGTTCATAAGAGCCATTTAAATAATCAAAGGGACAGAATTATGGTTTGAAGCCATGGCGGTCACTTTCATAGGGTTTAGTAATCTACGAGTGACCTTGACAATCAAATGTAGTGGAGTCAAGTTGTCTTGTGAGGACAGTCGATGTAGCACGCAAGCTAGTTTGAACACTCACTAATACCAAAAAGAAAAGAGAAAAAACTGATACAAATAAAATAGTACATCATTAACAATATTCTATTTCAATAACAGAGGAACACACTTGTTGAAGTTGGTGTATTAATATGTACATGTACGTATGGTCTTCCTCCATATAGATGTTTCTTTAAATGATATTCGCCTGATTATTTCTGATAGCATTGTGTTTATGACTAAAACAAGTGGTTGATGAATGACAGATACTCACCAAACATTAAAGAGATCAAGGTGTTGGACAAGAAGAAAGTGCGGAGGGCTAAGCTTTACTACCTTAGGGACAAAATGAACGCGCTTAAGAAGCACTAGCAACAAGCTTTCTATTATATTCAGTGGGGTCAGAAGTGCTTCCCTAACATATGGTGCGTTGTAATCCTCTTTTAGCTAGAATCTTATGACTTTTCATGATTATCTTATCCTGTTTTATGCGTGGAGGATCGATCGGAGAAATCTAGTGGAGCACTTATGTTTGGCTGAAATAAGAATAATAGAAAAAATGAATTCACATTGATTGCTTCAAGAGGAAGAACACCGCTCTTTCTTTATATGATTAGTTGCTCAAGCAAACCATGCCATCATTTTATCTTTTTGTTGATCGGTTGCCTAATTTTCCCCCTTCTTTGGAATATCCAAGGGCTTGTTGCGGTTAGGCTGTTTGTAATGTCTGTGGCTGATGTTATACAGTCCATCTATGAATATTATAATTTTTTGAACGAAGGATCAATTGATTATTTTATCATTAGGGGGCTTTTTGG

mRNA sequence

TTCATCTTCACGCCACTTCTTCTTCTTCACGCCGTCTCCTCCTCTGTTTCGGCAGCTCGGTGTCGCCGCCGCCGTCGTCTTTCTTCCGCTCGTTCCGTAGCAGGCTCTCTCCTAGCGGTTTTGCACTGGTTTCTTACTACCTCCTGGAAATCTAGAGCGAAAATGCAAGGTTTTCGCAGAATCAATCAATTGGTACGAAGGCAGAGTCCTGATGCTCATTTCAAATTGATTAGAGGTTATCCTCTGAATGGGGATGCTGGCTGTAGCTGCTCGGCTCCGACGTCGATGGAAAATAGTTTTACTATTCCTTGTCTTTTTGGGAATTCATATGGGTCTTTGAGCGGTTCCCTCTTGAGCTCTTTCTCGAGGTTCGGCAATCAATATCCGGAAGCCTTCTTGGCAGAAATTGCAGCTCCTTTTTCTAGCAGGGGCATTGCTACGACAAGCTCGATGGAATCATCTCTACAAGGATCCACTGCAGTTGATTCTGATATAACTCCTCGTATCAAATTTAAGAGGCTTGATAAAACCTCAAGACACATAATGCAGATTTTAGATAAGGAAGCTGTTGAGGAGGCAAAAGCACAGAGAGAAATTCCAGATATAAAGCCAGGCTATATTGTGCAGCTCAAAGTGGAAGTACCTGAGAACAAGCGGCGTGTCTCAACATTAAAAGGTATTGTAATAGCCAGAAGAAATGCTGGTCTCAACACAACTTTTAGATTAAGGAGGCTAGTTGCTGGTGTTGGGATTGAGTCCCTCTTCCCTCTATACTCACCAAACATTAAAGAGATCAAGGTGTTGGACAAGAAGAAAGTGCGGAGGGCTAAGCTTTACTACCTTAGGGACAAAATGAACGCGCTTAAGAAGCACTAGCAACAAGCTTTCTATTATATTCAGTGGGGTCAGAAGTGCTTCCCTAACATATGGTGCGTTGTAATCCTCTTTTAGCTAGAATCTTATGACTTTTCATGATTATCTTATCCTGTTTTATGCGTGGAGGATCGATCGGAGAAATCTAGTGGAGCACTTATGTTTGGCTGAAATAAGAATAATAGAAAAAATGAATTCACATTGATTGCTTCAAGAGGAAGAACACCGCTCTTTCTTTATATGATTAGTTGCTCAAGCAAACCATGCCATCATTTTATCTTTTTGTTGATCGGTTGCCTAATTTTCCCCCTTCTTTGGAATATCCAAGGGCTTGTTGCGGTTAGGCTGTTTGTAATGTCTGTGGCTGATGTTATACAGTCCATCTATGAATATTATAATTTTTTGAACGAAGGATCAATTGATTATTTTATCATTAGGGGGCTTTTTGG

Coding sequence (CDS)

TTCATCTTCACGCCACTTCTTCTTCTTCACGCCGTCTCCTCCTCTGTTTCGGCAGCTCGGTGTCGCCGCCGCCGTCGTCTTTCTTCCGCTCGTTCCGTAGCAGGCTCTCTCCTAGCGGTTTTGCACTGGTTTCTTACTACCTCCTGGAAATCTAGAGCGAAAATGCAAGGTTTTCGCAGAATCAATCAATTGGTACGAAGGCAGAGTCCTGATGCTCATTTCAAATTGATTAGAGGTTATCCTCTGAATGGGGATGCTGGCTGTAGCTGCTCGGCTCCGACGTCGATGGAAAATAGTTTTACTATTCCTTGTCTTTTTGGGAATTCATATGGGTCTTTGAGCGGTTCCCTCTTGAGCTCTTTCTCGAGGTTCGGCAATCAATATCCGGAAGCCTTCTTGGCAGAAATTGCAGCTCCTTTTTCTAGCAGGGGCATTGCTACGACAAGCTCGATGGAATCATCTCTACAAGGATCCACTGCAGTTGATTCTGATATAACTCCTCGTATCAAATTTAAGAGGCTTGATAAAACCTCAAGACACATAATGCAGATTTTAGATAAGGAAGCTGTTGAGGAGGCAAAAGCACAGAGAGAAATTCCAGATATAAAGCCAGGCTATATTGTGCAGCTCAAAGTGGAAGTACCTGAGAACAAGCGGCGTGTCTCAACATTAAAAGGTATTGTAATAGCCAGAAGAAATGCTGGTCTCAACACAACTTTTAGATTAAGGAGGCTAGTTGCTGGTGTTGGGATTGAGTCCCTCTTCCCTCTATACTCACCAAACATTAAAGAGATCAAGGTGTTGGACAAGAAGAAAGTGCGGAGGGCTAAGCTTTACTACCTTAGGGACAAAATGAACGCGCTTAAGAAGCACTAG

Protein sequence

FIFTPLLLLHAVSSSVSAARCRRRRRLSSARSVAGSLLAVLHWFLTTSWKSRAKMQGFRRINQLVRRQSPDAHFKLIRGYPLNGDAGCSCSAPTSMENSFTIPCLFGNSYGSLSGSLLSSFSRFGNQYPEAFLAEIAAPFSSRGIATTSSMESSLQGSTAVDSDITPRIKFKRLDKTSRHIMQILDKEAVEEAKAQREIPDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPLYSPNIKEIKVLDKKKVRRAKLYYLRDKMNALKKH

Homology

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BLAST of CmUC01G013060 vs. NCBI nr
Match: XP_011654048.1 (50S ribosomal protein L19-1, chloroplastic isoform X4 [Cucumis sativus])

HSP 1 Score: 412.1 bits (1058), Expect = 3.9e-111
Identity = 215/236 (91.10%), Postives = 223/236 (94.49%), Query Frame = 0


Query: 55  MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDAGCSCSAPTSMENSFTIPCLFGNSYGSLS 114
           MQGFRRINQLVRRQ PDA+FKLIRGYPLNGDAGCSCSAP SMENSFTIP LFG SYGSL 
Sbjct: 1   MQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKSYGSLC 60

Query: 115 GSLLSSFSRFGNQYPEAFLAEIAAPFSSRGIATTSSMESSLQGSTAVDSDITPRIKFKRL 174
           GS L SFSR GNQYPEAFLAE AAPFSSRGIATTSSMES+LQGS AVDS I PRIKFKRL
Sbjct: 61  GSFLRSFSRSGNQYPEAFLAETAAPFSSRGIATTSSMESALQGSPAVDSVIPPRIKFKRL 120

Query: 175 DKTSRHIMQILDKEAVEEAKAQREIPDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNA 234
           DKTSRHIMQILDKEAVEE KA+REIPDIKPGYIVQLKVEVPENKRR+STLKGIVIARRNA
Sbjct: 121 DKTSRHIMQILDKEAVEEVKARREIPDIKPGYIVQLKVEVPENKRRISTLKGIVIARRNA 180

Query: 235 GLNTTFRLRRLVAGVGIESLFPLYSPNIKEIKVLDKKKVRRAKLYYLRDKMNALKK 291
           GLN+TFR+RR+VAGVGIESLFPLYSPNIKEIKVL+KKKVRRAKLYYLRDKMNALKK
Sbjct: 181 GLNSTFRIRRVVAGVGIESLFPLYSPNIKEIKVLEKKKVRRAKLYYLRDKMNALKK 236

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BLAST of CmUC01G013060 vs. NCBI nr
Match: XP_008462642.1 (PREDICTED: 50S ribosomal protein L19, chloroplastic-like isoform X3 [Cucumis melo])

HSP 1 Score: 411.0 bits (1055), Expect = 8.6e-111
Identity = 215/236 (91.10%), Postives = 221/236 (93.64%), Query Frame = 0


Query: 55  MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDAGCSCSAPTSMENSFTIPCLFGNSYGSLS 114
           MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDA CSCSAP  MENSFTIPCLFG SYGSLS
Sbjct: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLS 60

Query: 115 GSLLSSFSRFGNQYPEAFLAEIAAPFSSRGIATTSSMESSLQGSTAVDSDITPRIKFKRL 174
           GSL  SFS  GNQYPEAFLAEIAAPFSSRGIATTSSM S+L GS AVDS I PRIKFKRL
Sbjct: 61  GSLWRSFSWSGNQYPEAFLAEIAAPFSSRGIATTSSMGSALLGSPAVDSVIPPRIKFKRL 120

Query: 175 DKTSRHIMQILDKEAVEEAKAQREIPDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNA 234
           DKTSRHIMQILDKEAVEE KA REIPDIKPGYIVQLKVEVPENKRR+STLKGIVIARRNA
Sbjct: 121 DKTSRHIMQILDKEAVEEVKAHREIPDIKPGYIVQLKVEVPENKRRISTLKGIVIARRNA 180

Query: 235 GLNTTFRLRRLVAGVGIESLFPLYSPNIKEIKVLDKKKVRRAKLYYLRDKMNALKK 291
           GLN+TFR+RR+VAGVGIESLFPLYSPNIKEIKVL+KKKVRRAKLYYLRDKMNALKK
Sbjct: 181 GLNSTFRIRRVVAGVGIESLFPLYSPNIKEIKVLEKKKVRRAKLYYLRDKMNALKK 236

[Close]

BLAST of CmUC01G013060 vs. NCBI nr
Match: XP_031743858.1 (50S ribosomal protein L19, chloroplastic isoform X3 [Cucumis sativus])

HSP 1 Score: 406.4 bits (1043), Expect = 2.1e-109
Identity = 215/240 (89.58%), Postives = 223/240 (92.92%), Query Frame = 0


Query: 55  MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDAGCSCSAPTSMENSFTIPCLFGNSYGSLS 114
           MQGFRRINQLVRRQ PDA+FKLIRGYPLNGDAGCSCSAP SMENSFTIP LFG SYGSL 
Sbjct: 1   MQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGKSYGSLC 60

Query: 115 GSLLSSFSRFGNQYPEA----FLAEIAAPFSSRGIATTSSMESSLQGSTAVDSDITPRIK 174
           GS L SFSR GNQYPEA    FLAE AAPFSSRGIATTSSMES+LQGS AVDS I PRIK
Sbjct: 61  GSFLRSFSRSGNQYPEAFVCIFLAETAAPFSSRGIATTSSMESALQGSPAVDSVIPPRIK 120

Query: 175 FKRLDKTSRHIMQILDKEAVEEAKAQREIPDIKPGYIVQLKVEVPENKRRVSTLKGIVIA 234
           FKRLDKTSRHIMQILDKEAVEE KA+REIPDIKPGYIVQLKVEVPENKRR+STLKGIVIA
Sbjct: 121 FKRLDKTSRHIMQILDKEAVEEVKARREIPDIKPGYIVQLKVEVPENKRRISTLKGIVIA 180

Query: 235 RRNAGLNTTFRLRRLVAGVGIESLFPLYSPNIKEIKVLDKKKVRRAKLYYLRDKMNALKK 291
           RRNAGLN+TFR+RR+VAGVGIESLFPLYSPNIKEIKVL+KKKVRRAKLYYLRDKMNALKK
Sbjct: 181 RRNAGLNSTFRIRRVVAGVGIESLFPLYSPNIKEIKVLEKKKVRRAKLYYLRDKMNALKK 240

[Close]

BLAST of CmUC01G013060 vs. NCBI nr
Match: KAE8652777.1 (hypothetical protein Csa_022701 [Cucumis sativus])

HSP 1 Score: 406.0 bits (1042), Expect = 2.8e-109
Identity = 220/274 (80.29%), Postives = 228/274 (83.21%), Query Frame = 0


Query: 49  WKSRAKMQGFRRINQLVRRQSPDAHFKLIRGYPLNGDAGCSCSAPTSMENSFTIPCLFGN 108
           WKS AKMQGFRRINQLVRRQ PDA+FKLIRGYPLNGDAGCSCSAP SMENSFTIP LFG 
Sbjct: 226 WKSSAKMQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGK 285

Query: 109 SYGSLSGSLLSSFSRFGNQYPEAF--------------------------------LAEI 168
           SYGSL GS L SFSR GNQYPEAF                                LAE 
Sbjct: 286 SYGSLCGSFLRSFSRSGNQYPEAFKNMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAET 345

Query: 169 AAPFSSRGIATTSSMESSLQGSTAVDSDITPRIKFKRLDKTSRHIMQILDKEAVEEAKAQ 228
           AAPFSSRGIATTSSMES+LQGS AVDS I PRIKFKRLDKTSRHIMQILDKEAVEE KA+
Sbjct: 346 AAPFSSRGIATTSSMESALQGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAR 405

Query: 229 REIPDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFP 288
           REIPDIKPGYIVQLKVEVPENKRR+STLKGIVIARRNAGLN+TFR+RR+VAGVGIESLFP
Sbjct: 406 REIPDIKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFP 465

Query: 289 LYSPNIKEIKVLDKKKVRRAKLYYLRDKMNALKK 291
           LYSPNIKEIKVL+KKKVRRAKLYYLRDKMNALKK
Sbjct: 466 LYSPNIKEIKVLEKKKVRRAKLYYLRDKMNALKK 499

[Close]

BLAST of CmUC01G013060 vs. NCBI nr
Match: XP_038896029.1 (uncharacterized protein LOC120084206 [Benincasa hispida])

HSP 1 Score: 399.4 bits (1025), Expect = 2.6e-107
Identity = 218/268 (81.34%), Postives = 222/268 (82.84%), Query Frame = 0


Query: 55  MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDAGCSCSAPTSMENSFTIPCLFGNSYGSLS 114
           MQGFRRINQLVRRQSPDAHFKLIRGYPLNG+AGCSCS P  MENS  I CLFGNSY S S
Sbjct: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGNAGCSCSTPMLMENSSAISCLFGNSYVSFS 60

Query: 115 GSLLSSFSRFGNQYPEAF--------------------------------LAEIAAPFSS 174
           GSLL SFSR GNQ PEAF                                LAEI APFSS
Sbjct: 61  GSLLRSFSRLGNQDPEAFKNMSSQMEFVPSRKHVSSVCSAFPSSRPHLFQLAEIVAPFSS 120

Query: 175 RGIATTSSMESSLQGSTAVDSDITPRIKFKRLDKTSRHIMQILDKEAVEEAKAQREIPDI 234
           RGIATTSSMES+LQGS AVDSDITPRIKFKRLDKTS+HIMQILDKEAVEE KAQREIPDI
Sbjct: 121 RGIATTSSMESALQGSPAVDSDITPRIKFKRLDKTSKHIMQILDKEAVEEVKAQREIPDI 180

Query: 235 KPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPLYSPNI 291
           +PGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPLYSPNI
Sbjct: 181 RPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPLYSPNI 240

[Close]

BLAST of CmUC01G013060 vs. ExPASy Swiss-Prot
Match: P82413 (50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL19 PE=1 SV=2)

HSP 1 Score: 137.9 bits (346), Expect = 1.8e-31
Identity = 87/210 (41.43%), Postives = 133/210 (63.33%), Query Frame = 0


Query: 79  GYPLNGDAGCSCSAPTSMENSFTIPCLFGNSYGSLSGSLLSSFSRFGNQYPEAFLAEIAA 138
           G+P++ +   S S  ++  ++  +     N + S   S+ S  +R  N +     AE ++
Sbjct: 29  GFPIDSNRRFSLS--SNCRSNLMVSRASSNLFSSNFSSIFSFPAR--NSFVVRSEAEDSS 88

Query: 139 PFSSRGIATTSSMESSLQGSTAVDSDITPRIKFKRLDKTSRHIMQILDKEAVEEAKAQRE 198
              +  +A  +  E  ++ S A   +  PR +  +L      IM IL+K+AV  A+  R 
Sbjct: 89  DAPAESVAVVAEEELPVE-SEAEAEERPPRQQRVKLG----DIMGILNKKAVHAAEELRP 148

Query: 199 IPDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPLY 258
           +P I+ G IVQ+++EVPENKRR+S  KGIVI+R+NAG++TT R+RR++AGVG+E +FPLY
Sbjct: 149 VPGIRTGDIVQIRLEVPENKRRLSVYKGIVISRQNAGIHTTIRIRRIIAGVGVEIVFPLY 208

Query: 259 SPNIKEIKVLDKKKVRRAKLYYLRDKMNAL 289
           SPNIKEIKV+  +KVR+A+LYYLRDK+  L
Sbjct: 209 SPNIKEIKVVSHRKVRKARLYYLRDKLPRL 229

[Close]

BLAST of CmUC01G013060 vs. ExPASy Swiss-Prot
Match: Q8RXX5 (50S ribosomal protein L19-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g47190 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.4e-31
Identity = 64/108 (59.26%), Postives = 92/108 (85.19%), Query Frame = 0


Query: 181 IMQILDKEAVEEAKAQREIPDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTF 240
           IM +L+K+A+E A+  R +P ++ G IV++K+EVPENKRR+S  KGIV++R+NAG++TT 
Sbjct: 118 IMGLLNKKAIEVAETVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTI 177

Query: 241 RLRRLVAGVGIESLFPLYSPNIKEIKVLDKKKVRRAKLYYLRDKMNAL 289
           R+RR++AG+G+E +FP+YSPNIKEIKV+  +KVRRA+LYYLRDK+  L
Sbjct: 178 RIRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRL 225

[Close]

BLAST of CmUC01G013060 vs. ExPASy Swiss-Prot
Match: Q8W463 (50S ribosomal protein L19-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g17560 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 5.4e-31
Identity = 82/198 (41.41%), Postives = 123/198 (62.12%), Query Frame = 0


Query: 91  SAPTSMENSFTIPCLFGNSYGSLSGSLLSSFSRFGNQYPEAFLAEIAAPFSSRGIATTSS 150
           S   SM++  ++  L  N  GS  G  L   +R  N++            S   +A  + 
Sbjct: 33  SCAPSMDSRISVSRLSLNHPGSKFGFSLD--TRVRNEFIVRAEEGNTEAESEEFVAEIAD 92

Query: 151 MESSLQGSTAVDSDITPRIKFKRLDKTSRHIMQILDKEAVEEAKAQREIPDIKPGYIVQL 210
            E +++          PRIK          +M IL+++A+E A+  R +P+I+ G IV++
Sbjct: 93  TEGNVEEVVEAKPTRKPRIKL-------GDVMGILNQKAIEVAEKVRPVPEIRTGDIVEI 152

Query: 211 KVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPLYSPNIKEIKVLDK 270
           K+EVPENKRR+S  KGIV++R+NAG++TT R+RR++AG+G+E +FP+YSPNIKEIKV+  
Sbjct: 153 KLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPIYSPNIKEIKVVSH 212

Query: 271 KKVRRAKLYYLRDKMNAL 289
           +KVRRA+LYYLRDK+  L
Sbjct: 213 RKVRRARLYYLRDKLPRL 221

[Close]

BLAST of CmUC01G013060 vs. ExPASy Swiss-Prot
Match: Q2VZV5 (50S ribosomal protein L19 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) OX=342108 GN=rplS PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 9.5e-20
Identity = 50/106 (47.17%), Postives = 76/106 (71.70%), Query Frame = 0


Query: 180 HIMQILDKEAVEEAKAQREIPDIKPGYIVQLKVEVPE-NKRRVSTLKGIVIARRNAGLNT 239
           +I++ L+KE +E+  A R +P   PG  +++ V+V E N+ RV   +G+ IAR+N GLN+
Sbjct: 3   NIIEQLEKEQIEKLTADRGVPSFAPGDTLKVNVKVIEGNRERVQAYEGVCIARKNDGLNS 62

Query: 240 TFRLRRLVAGVGIESLFPLYSPNIKEIKVLDKKKVRRAKLYYLRDK 285
           +F +R++  G G+E +FPLYSPNI  I+V+ +  VRRAKLYYLRD+
Sbjct: 63  SFVVRKISYGEGVERIFPLYSPNIASIEVVRRGDVRRAKLYYLRDR 108

[Close]

BLAST of CmUC01G013060 vs. ExPASy Swiss-Prot
Match: Q2G8H1 (50S ribosomal protein L19 OS=Novosphingobium aromaticivorans (strain ATCC 700278 / DSM 12444 / CCUG 56034 / CIP 105152 / NBRC 16084 / F199) OX=279238 GN=rplS PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.0e-18
Identity = 51/106 (48.11%), Postives = 73/106 (68.87%), Query Frame = 0


Query: 180 HIMQILDKEAVEEAKAQREIPDIKPGYIVQLKVEVPENKR-RVSTLKGIVIARRNAGLNT 239
           +++Q L+ EA+ E KA++EIPD + G  V++ V V E +R RV   +G+ IAR N GL +
Sbjct: 2   NLIQQLEAEAIAEFKAKKEIPDFRAGDTVRVGVRVVEGERTRVQAYEGVCIARSNRGLGS 61

Query: 240 TFRLRRLVAGVGIESLFPLYSPNIKEIKVLDKKKVRRAKLYYLRDK 285
            F +R++  G G+E +FPLYSPNI  I V+ +  VRRAKLYYLR +
Sbjct: 62  NFTVRKISFGEGVERVFPLYSPNIDSITVVRRGVVRRAKLYYLRGR 107

[Close]

BLAST of CmUC01G013060 vs. ExPASy TrEMBL
Match: A0A1S3CHY3 (50S ribosomal protein L19, chloroplastic-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103500938 PE=3 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 4.2e-111
Identity = 215/236 (91.10%), Postives = 221/236 (93.64%), Query Frame = 0


Query: 55  MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDAGCSCSAPTSMENSFTIPCLFGNSYGSLS 114
           MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDA CSCSAP  MENSFTIPCLFG SYGSLS
Sbjct: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLS 60

Query: 115 GSLLSSFSRFGNQYPEAFLAEIAAPFSSRGIATTSSMESSLQGSTAVDSDITPRIKFKRL 174
           GSL  SFS  GNQYPEAFLAEIAAPFSSRGIATTSSM S+L GS AVDS I PRIKFKRL
Sbjct: 61  GSLWRSFSWSGNQYPEAFLAEIAAPFSSRGIATTSSMGSALLGSPAVDSVIPPRIKFKRL 120

Query: 175 DKTSRHIMQILDKEAVEEAKAQREIPDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNA 234
           DKTSRHIMQILDKEAVEE KA REIPDIKPGYIVQLKVEVPENKRR+STLKGIVIARRNA
Sbjct: 121 DKTSRHIMQILDKEAVEEVKAHREIPDIKPGYIVQLKVEVPENKRRISTLKGIVIARRNA 180

Query: 235 GLNTTFRLRRLVAGVGIESLFPLYSPNIKEIKVLDKKKVRRAKLYYLRDKMNALKK 291
           GLN+TFR+RR+VAGVGIESLFPLYSPNIKEIKVL+KKKVRRAKLYYLRDKMNALKK
Sbjct: 181 GLNSTFRIRRVVAGVGIESLFPLYSPNIKEIKVLEKKKVRRAKLYYLRDKMNALKK 236

[Close]

BLAST of CmUC01G013060 vs. ExPASy TrEMBL
Match: A0A0A0LV41 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G126060 PE=3 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 1.3e-109
Identity = 220/274 (80.29%), Postives = 228/274 (83.21%), Query Frame = 0


Query: 49  WKSRAKMQGFRRINQLVRRQSPDAHFKLIRGYPLNGDAGCSCSAPTSMENSFTIPCLFGN 108
           WKS AKMQGFRRINQLVRRQ PDA+FKLIRGYPLNGDAGCSCSAP SMENSFTIP LFG 
Sbjct: 132 WKSSAKMQGFRRINQLVRRQIPDANFKLIRGYPLNGDAGCSCSAPMSMENSFTIPYLFGK 191

Query: 109 SYGSLSGSLLSSFSRFGNQYPEAF--------------------------------LAEI 168
           SYGSL GS L SFSR GNQYPEAF                                LAE 
Sbjct: 192 SYGSLCGSFLRSFSRSGNQYPEAFKNMSSQMEFVPLRKHASSTFSAFQSSRPHFFQLAET 251

Query: 169 AAPFSSRGIATTSSMESSLQGSTAVDSDITPRIKFKRLDKTSRHIMQILDKEAVEEAKAQ 228
           AAPFSSRGIATTSSMES+LQGS AVDS I PRIKFKRLDKTSRHIMQILDKEAVEE KA+
Sbjct: 252 AAPFSSRGIATTSSMESALQGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAR 311

Query: 229 REIPDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFP 288
           REIPDIKPGYIVQLKVEVPENKRR+STLKGIVIARRNAGLN+TFR+RR+VAGVGIESLFP
Sbjct: 312 REIPDIKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFP 371

Query: 289 LYSPNIKEIKVLDKKKVRRAKLYYLRDKMNALKK 291
           LYSPNIKEIKVL+KKKVRRAKLYYLRDKMNALKK
Sbjct: 372 LYSPNIKEIKVLEKKKVRRAKLYYLRDKMNALKK 405

[Close]

BLAST of CmUC01G013060 vs. ExPASy TrEMBL
Match: A0A1S3CHF9 (50S ribosomal protein L19-2, chloroplastic-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500938 PE=3 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 4.0e-106
Identity = 215/268 (80.22%), Postives = 221/268 (82.46%), Query Frame = 0


Query: 55  MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDAGCSCSAPTSMENSFTIPCLFGNSYGSLS 114
           MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDA CSCSAP  MENSFTIPCLFG SYGSLS
Sbjct: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLS 60

Query: 115 GSLLSSFSRFGNQYPEAF--------------------------------LAEIAAPFSS 174
           GSL  SFS  GNQYPEAF                                LAEIAAPFSS
Sbjct: 61  GSLWRSFSWSGNQYPEAFKNMSSQMEFVALRKHASSTFSVIQSSRPHFFQLAEIAAPFSS 120

Query: 175 RGIATTSSMESSLQGSTAVDSDITPRIKFKRLDKTSRHIMQILDKEAVEEAKAQREIPDI 234
           RGIATTSSM S+L GS AVDS I PRIKFKRLDKTSRHIMQILDKEAVEE KA REIPDI
Sbjct: 121 RGIATTSSMGSALLGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPDI 180

Query: 235 KPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPLYSPNI 291
           KPGYIVQLKVEVPENKRR+STLKGIVIARRNAGLN+TFR+RR+VAGVGIESLFPLYSPNI
Sbjct: 181 KPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPNI 240

[Close]

BLAST of CmUC01G013060 vs. ExPASy TrEMBL
Match: A0A1S3CHC3 (50S ribosomal protein L19-2, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500938 PE=3 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 5.3e-106
Identity = 215/269 (79.93%), Postives = 221/269 (82.16%), Query Frame = 0


Query: 55  MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDAGCSCSAPTSMENSFTIPCLFGNSYGSLS 114
           MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDA CSCSAP  MENSFTIPCLFG SYGSLS
Sbjct: 1   MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDASCSCSAPMLMENSFTIPCLFGKSYGSLS 60

Query: 115 GSLLSSFSRFGNQYPEAF---------------------------------LAEIAAPFS 174
           GSL  SFS  GNQYPEAF                                 LAEIAAPFS
Sbjct: 61  GSLWRSFSWSGNQYPEAFQKNMSSQMEFVALRKHASSTFSVIQSSRPHFFQLAEIAAPFS 120

Query: 175 SRGIATTSSMESSLQGSTAVDSDITPRIKFKRLDKTSRHIMQILDKEAVEEAKAQREIPD 234
           SRGIATTSSM S+L GS AVDS I PRIKFKRLDKTSRHIMQILDKEAVEE KA REIPD
Sbjct: 121 SRGIATTSSMGSALLGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKAHREIPD 180

Query: 235 IKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPLYSPN 291
           IKPGYIVQLKVEVPENKRR+STLKGIVIARRNAGLN+TFR+RR+VAGVGIESLFPLYSPN
Sbjct: 181 IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN 240

[Close]

BLAST of CmUC01G013060 vs. ExPASy TrEMBL
Match: A0A6J1GUP7 (54S ribosomal protein subunit img1, mitochondrial-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457281 PE=3 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 7.9e-102
Identity = 207/269 (76.95%), Postives = 217/269 (80.67%), Query Frame = 0


Query: 55  MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDAGCSCSAPTSMENSFTIPCLFGNSYGSLS 114
           MQ FRRINQLVRRQSPDAHFK IRGYPLNGDA C CSA  SME SFT   LFGN Y SL+
Sbjct: 1   MQNFRRINQLVRRQSPDAHFKSIRGYPLNGDASCCCSASMSMEKSFTSLRLFGNPYESLN 60

Query: 115 GSLLSSFSRFGNQYPEAF--------------------------------LAEIAAPFSS 174
           GSL  SFS+ GNQYPEAF                                LAEIAAPFSS
Sbjct: 61  GSLFRSFSKLGNQYPEAFKDMGSQMEFLPSVKRVSSTCPAFQSPKKHLFQLAEIAAPFSS 120

Query: 175 RGIATTSSMESSLQGSTAVDSDITPRIKFKRLDKTSRHIMQILDKEAVEEAKAQREIPDI 234
           RGIATTSSMES+ QGS+ +D+DITPRIKFKRLDKTS+HIMQILDKEAVEE KA+REIPDI
Sbjct: 121 RGIATTSSMESAPQGSSGIDTDITPRIKFKRLDKTSKHIMQILDKEAVEEVKAKREIPDI 180

Query: 235 KPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPLYSPNI 292
           KPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRR+VAGVGIESLFPLYSPNI
Sbjct: 181 KPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRVVAGVGIESLFPLYSPNI 240

[Close]

BLAST of CmUC01G013060 vs. TAIR 10
Match: AT4G11630.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 223.8 bits (569), Expect = 1.8e-58
Identity = 115/152 (75.66%), Postives = 137/152 (90.13%), Query Frame = 0


Query: 140 FSSRGIATTSSMESSLQGSTAVDSDITPRIKFKRLDKTSRHIMQILDKEAVEEAKAQREI 199
           ++SR  +TT   +SS+QGS   D  +  RIKFKRLDKT++HIMQI+DKEAVEE ++ REI
Sbjct: 76  YASRCFSTTG--DSSVQGSPESDCVVPQRIKFKRLDKTAKHIMQIVDKEAVEEVRSLREI 135

Query: 200 PDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPLYS 259
           P+IKPGYIVQLKVEVPENKRRVS +KG+VIARRNAGLN+TFR+RRLVAGVG+ES+FPLYS
Sbjct: 136 PEIKPGYIVQLKVEVPENKRRVSIVKGVVIARRNAGLNSTFRIRRLVAGVGVESMFPLYS 195

Query: 260 PNIKEIKVLDKKKVRRAKLYYLRDKMNALKKH 292
           PN++EIKV+DKKKVRRAKLYYLRDK+NALKKH
Sbjct: 196 PNLREIKVVDKKKVRRAKLYYLRDKVNALKKH 225

[Close]

BLAST of CmUC01G013060 vs. TAIR 10
Match: AT5G11750.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 221.5 bits (563), Expect = 9.0e-58
Identity = 130/238 (54.62%), Postives = 165/238 (69.33%), Query Frame = 0


Query: 55  MQGFRRINQLVRRQSPDAHFKLIRGYPLNGDAGCSCSAPTSMENSFTIPCLFGNSYGSLS 114
           MQ  R   +L++R         +R    +  +G      + M    + PC    +Y    
Sbjct: 1   MQSIRSSTRLLQRHRFSIS-NTLRFTSSSSSSGSWSENESRMVGFDSFPCTRAATY---- 60

Query: 115 GSLLSSFSRFGNQYPEAFLAEIAAPFSSRGIATT-SSMESSLQGSTAVDSDITPRIKFKR 174
             L+SS    G  +  + + +    +S R  +TT  S++S+ QGS   D  +  RIKFKR
Sbjct: 61  --LISSLKNVG--FSSSAIPKQDFKYSLRCFSTTGDSVQSTPQGSPESDCVVPQRIKFKR 120

Query: 175 LDKTSRHIMQILDKEAVEEAKAQREIPDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRN 234
           LDKT++HIMQI+DKEAVEE +  REIP+IKPGYIVQLKVEVPENKRRVS +KG+VIARRN
Sbjct: 121 LDKTAKHIMQIVDKEAVEEVRNLREIPEIKPGYIVQLKVEVPENKRRVSIVKGVVIARRN 180

Query: 235 AGLNTTFRLRRLVAGVGIESLFPLYSPNIKEIKVLDKKKVRRAKLYYLRDKMNALKKH 292
           AGLN+TFR+RRLVAGVG+ES+FPLYSPN++EIKV+DKKKVRRAKLYYLRDK+NALKKH
Sbjct: 181 AGLNSTFRIRRLVAGVGVESMFPLYSPNLREIKVVDKKKVRRAKLYYLRDKVNALKKH 229

[Close]

BLAST of CmUC01G013060 vs. TAIR 10
Match: AT1G24240.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 218.8 bits (556), Expect = 5.8e-57
Identity = 114/152 (75.00%), Postives = 133/152 (87.50%), Query Frame = 0


Query: 140 FSSRGIATTSSMESSLQGSTAVDSDITPRIKFKRLDKTSRHIMQILDKEAVEEAKAQREI 199
           FSSR  +TT     S+QGS   D  +  RIKFKRLDKT++HIMQI+DKEAVEE +  REI
Sbjct: 74  FSSRCFSTTG---DSVQGSPESDCVVPQRIKFKRLDKTAKHIMQIVDKEAVEEVRTLREI 133

Query: 200 PDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPLYS 259
           P+IKPGYIVQLKVEVPENKRRVS +KG+VIARRNAGLN+TFR+RRLVAGVG+ES+FPLYS
Sbjct: 134 PEIKPGYIVQLKVEVPENKRRVSIVKGVVIARRNAGLNSTFRIRRLVAGVGVESMFPLYS 193

Query: 260 PNIKEIKVLDKKKVRRAKLYYLRDKMNALKKH 292
           PN++ IKV+DKKKVRRAKLYYLR+K+NALKKH
Sbjct: 194 PNLRVIKVVDKKKVRRAKLYYLREKVNALKKH 222

[Close]

BLAST of CmUC01G013060 vs. TAIR 10
Match: AT5G47190.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 137.5 bits (345), Expect = 1.7e-32
Identity = 64/108 (59.26%), Postives = 92/108 (85.19%), Query Frame = 0


Query: 181 IMQILDKEAVEEAKAQREIPDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTF 240
           IM +L+K+A+E A+  R +P ++ G IV++K+EVPENKRR+S  KGIV++R+NAG++TT 
Sbjct: 118 IMGLLNKKAIEVAETVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTI 177

Query: 241 RLRRLVAGVGIESLFPLYSPNIKEIKVLDKKKVRRAKLYYLRDKMNAL 289
           R+RR++AG+G+E +FP+YSPNIKEIKV+  +KVRRA+LYYLRDK+  L
Sbjct: 178 RIRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRL 225

[Close]

BLAST of CmUC01G013060 vs. TAIR 10
Match: AT4G17560.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 136.3 bits (342), Expect = 3.8e-32
Identity = 82/198 (41.41%), Postives = 123/198 (62.12%), Query Frame = 0


Query: 91  SAPTSMENSFTIPCLFGNSYGSLSGSLLSSFSRFGNQYPEAFLAEIAAPFSSRGIATTSS 150
           S   SM++  ++  L  N  GS  G  L   +R  N++            S   +A  + 
Sbjct: 33  SCAPSMDSRISVSRLSLNHPGSKFGFSLD--TRVRNEFIVRAEEGNTEAESEEFVAEIAD 92

Query: 151 MESSLQGSTAVDSDITPRIKFKRLDKTSRHIMQILDKEAVEEAKAQREIPDIKPGYIVQL 210
            E +++          PRIK          +M IL+++A+E A+  R +P+I+ G IV++
Sbjct: 93  TEGNVEEVVEAKPTRKPRIKL-------GDVMGILNQKAIEVAEKVRPVPEIRTGDIVEI 152

Query: 211 KVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPLYSPNIKEIKVLDK 270
           K+EVPENKRR+S  KGIV++R+NAG++TT R+RR++AG+G+E +FP+YSPNIKEIKV+  
Sbjct: 153 KLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPIYSPNIKEIKVVSH 212

Query: 271 KKVRRAKLYYLRDKMNAL 289
           +KVRRA+LYYLRDK+  L
Sbjct: 213 RKVRRARLYYLRDKLPRL 221

The following BLAST results are available for this feature:

BLAST of CmUC01G013060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011654048.1	3.9e-111	91.10	50S ribosomal protein L19-1, chloroplastic isoform X4 [Cucumis sativus]	[more]
XP_008462642.1	8.6e-111	91.10	PREDICTED: 50S ribosomal protein L19, chloroplastic-like isoform X3 [Cucumis mel...	[more]
XP_031743858.1	2.1e-109	89.58	50S ribosomal protein L19, chloroplastic isoform X3 [Cucumis sativus]	[more]
KAE8652777.1	2.8e-109	80.29	hypothetical protein Csa_022701 [Cucumis sativus]	[more]
XP_038896029.1	2.6e-107	81.34	uncharacterized protein LOC120084206 [Benincasa hispida]	[more]

BLAST of CmUC01G013060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P82413	1.8e-31	41.43	50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL19 P...	[more]
Q8RXX5	2.4e-31	59.26	50S ribosomal protein L19-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At...	[more]
Q8W463	5.4e-31	41.41	50S ribosomal protein L19-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At...	[more]
Q2VZV5	9.5e-20	47.17	50S ribosomal protein L19 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 70...	[more]
Q2G8H1	1.0e-18	48.11	50S ribosomal protein L19 OS=Novosphingobium aromaticivorans (strain ATCC 700278...	[more]

BLAST of CmUC01G013060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CHY3	4.2e-111	91.10	50S ribosomal protein L19, chloroplastic-like isoform X3 OS=Cucumis melo OX=3656...	[more]
A0A0A0LV41	1.3e-109	80.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G126060 PE=3 SV=1	[more]
A0A1S3CHF9	4.0e-106	80.22	50S ribosomal protein L19-2, chloroplastic-like isoform X2 OS=Cucumis melo OX=36...	[more]
A0A1S3CHC3	5.3e-106	79.93	50S ribosomal protein L19-2, chloroplastic-like isoform X1 OS=Cucumis melo OX=36...	[more]
A0A6J1GUP7	7.9e-102	76.95	54S ribosomal protein subunit img1, mitochondrial-like isoform X2 OS=Cucurbita m...	[more]

BLAST of CmUC01G013060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G11630.1	1.8e-58	75.66	Ribosomal protein L19 family protein	[more]
AT5G11750.1	9.0e-58	54.62	Ribosomal protein L19 family protein	[more]
AT1G24240.1	5.8e-57	75.00	Ribosomal protein L19 family protein	[more]
AT5G47190.1	1.7e-32	59.26	Ribosomal protein L19 family protein	[more]
AT4G17560.1	3.8e-32	41.41	Ribosomal protein L19 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001857	Ribosomal protein L19	PRINTS	PR00061	RIBOSOMALL19	coord: 186..215 score: 20.69 coord: 245..268 score: 39.58
IPR001857	Ribosomal protein L19	PFAM	PF01245	Ribosomal_L19	coord: 189..285 e-value: 2.1E-31 score: 108.1
IPR001857	Ribosomal protein L19	TIGRFAM	TIGR01024	TIGR01024	coord: 190..285 e-value: 4.1E-29 score: 99.0
IPR001857	Ribosomal protein L19	PANTHER	PTHR15680	RIBOSOMAL PROTEIN L19	coord: 134..288
IPR038657	Ribosomal protein L19 superfamily	GENE3D	2.30.30.790		coord: 171..291 e-value: 3.0E-35 score: 122.8
None	No IPR available	PANTHER	PTHR15680:SF9	39S RIBOSOMAL PROTEIN L19, MITOCHONDRIAL	coord: 134..288
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 188..286

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC01G013060.1	CmUC01G013060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome