CmUC01G012060 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC01G012060
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	RAB6-interacting golgin
Location	CmU531Chr01: 23383089 .. 23389634 (-)
RNA-Seq Expression	CmUC01G012060
Synteny	CmUC01G012060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGACTCATGAATGAGCTAAGAGGACGCATGGAATAATCTAATAGTAATAGTCCATGGAGGACCCAACATTACCATGGAGGTCCTATTAGTAGATTCATGAAAGACATTTGCAAAACCAAGTGCTACTCTTGGAGGTCCTACCAGTACCATGTAGGACTTCTGCAAAAAGACTTAGTAGTAGTCCATAGAGGACCCATGGACCCCTGTAAGAACCCAGGAGGACCTAATGGTACCATGGAAGTCGTAGTGGTGCCATGAAGAAACTTCGTAAAGAACCTCACAATATCATGGACGTCCTAGCAGTACCATAGAAGACCTCTCCAGGATCAATGGAGGACTTAACAATACCGAGCGAGTGAGGGATTGACTGTCGTTTTAGGTAGTGGTGTAGTAACCACCTGAAGAGTAAAGACTCAATGGTTTCATGGTAGTGGCAAGCCTAATTGTCTGTTACAATATACTAAGCCTATATAAATGACATAAATCATTTGTCAAAGGTACGTTAAAAAATATTCTCAGCTACTCTCTACTACCAGTACCCATCTCAACTCGTTACTAACTTGAGCGTCAGAATGTCAATGACTTGACACCACATTTCGGTTCAATTTCCTTTGTTTTGCAAGACACTTATGTTATTTTCTCCCAAAAAAATACAAATTGCTAGTTGGACCATCATTCGGTAGCAACACTTTTAAAAAGGTGACTATTTTCGTTCCTATACTTCTAAAAGGTAACCATTTGGTCCCTTCATCTTCAATTTTTTTTCATTTTTAAAGGACCAAAATGGTCATTTCTTAAAAGTATATGAACCAAAATGAACTAAAGTTAAAGGTATAAGGCCTTATTTTACACTTTAAAAATATGAGGACCAGAATGAATCAAAATCAAAATTATAAGAACGAAAATGAACATTTTAAAAGCAAAATAACCAAAATGAACTAAAATCAACCGTTCATAGACCAAAGCAATATTTAAACCATATTTATATTTCTTGCAAATACAATTTTAAGAAGGTTTGGTGACAGATTCTTTACAAGGTGCTAAAGAAAGGTCTTAATAAGAAAAGGAAAAGGTGAGAGAACTTTCTTGCAAGTAAGTAAAGTAATAATAATAATAATAAGGGGACAAAAAGAGAAGCAGCCTTTTTGCAGTTCTGCTGTTACCCATCTCTCCAACTCAGTCTTGGTTTTTAAGGCTTTTTCCCCCTTATATTCATTTCATTTCATACTCAGTGCAGGTAACACCTTACTCTCCACTCCATGACAAAACTTATATCCCAAGCACCTGCAATTCAATTCCTAGAAAATCCCCAGAAATTATTGCCAGATTCCACTTCTTTGACCCAAAGCAAAAGTAAACTCTCCATCACAATTTGGTAACTCATTGTCAAATGACAGAGACAAAAGCAAGTGCATATATATAGATATATATATAAATTTCCGAACACAATGTGTAAATTGAAATCTAATCAATTAGGCGTTTGAGTAAAGATAAGTGCATTTTGGTTCCAAAAATTCACAACAAAAGCAGAGCAGAGTGCAGAGGTGAAATAAGGTAAACAATTAGGTCGGATGCATAAGGATAACGATGTCTGTTGAGAAGTAATAAGGTAAAGTAAAGAGAGAGGATTGGGTAGGGTTACATACATACATTACATACCTTTAAAGCCATTGCGGCGCTTAGGGTTTGGCTACCTAACTGAGAAAGATAATCATCATTTGCGAGAGAGATTGGGTATGACGACGACGCAGAAACAGAGCTGGGAAGCGCAACAATCGCAGCAGATGCAGAGGGTGAAAAGCTCGGGGATGATAAGCAGCCATGCGAATGCGATTGGGAGTCCGGTGAAGGAGGATCAAGAGGAGGAGCTTTCTCGATCGGCTTTAGCTCTGTTTAGGGCTAAGGAAGAGGAGATCGAGAGGAAGAAGATGGAGATGAGAGAGAAGGTGGAAGCTCGCCTTGGAAGAGCTGAAGAAGCGACGAAGCGATTGGCGGAGATTCGCGAAGTAAGTGTGGAATCCATTGTTGATGATGGTAATAATGGTTGGTTTTAAGGTTCTTCCATTCATTAAGGTTTGTGAAATTGATAGGAACTTGAAGGAATGACGGATCCGATGAGGAAGGAAGTTTCGTTCATACGGAAGAAGATTGATTTGGTGAACAAAGAGTTGAAGCCATTGGGACTCACTTGCCAAAAGAAGGTCACAATTTCAAACTCGAGATACCCTCTTCAATCAATTTCTCATAATAATAACGATAATGATAATAATAATATATATATATTAAAATACTATTATGGTCTCACTATTTCAAGTAGGAGCATTTGTTGGTTAGATTGGGTTGAAATCCTTTCCCAACCCACTATTCTAATGATAAGTTTCTTCAATCCAAATAACTCTTATTAAATTTGAGTAGATACAAATATAACCACAAGCCCAAAATATTTGTAGATATAGCAGAATGTAAAAGAATTTACATATATAACAAAGATTCTACATTTGAACTCTATGAATGATAGACTATATAGTTCGTAGAGTATATGTATATATATATAATTATATCATAACTAAAAGTAATAAGAAGTTCGGATTGGATTGGGTTGAGTTATTTTAGGTAAACCATGAATCAACCCAACCCATAAAATTTCTATTTATTTGAACTCAACCCAACATAAATGAGTTTATGACCCAACCCAAACTGTTTTTCAGGTCATTGGATTTTTTGAACACCCCTACTTTGAATTTGTTAAATTTTTATTTTTAATCGTCCAATTTTAATCTCTGAAATTTTAATAAATCTTAAATTTAGTCTTTATAATTATTTTATTGTTTTTTTTTTAAATAGTATTATTTATTAGCATTTTAACCTTTTTTTTCCATTTAGATTGCATTTGAATTCGTAGGTTTTCAAATTCAACCATTTTATTGTTAGATTTACTTCATTAATTATTTACGAAAATGTCGTTTTAAATTCTAAACTTTAAAAATATGTTGGTTGTAATGTTTGAAATTTCAACATCATTATATTTTGGTGCTAAATTCTTGAAAGAATATTTATCCATGTGTTTGAACTTTCAAATATACAACTTTTCTTAAATTTTTAAACTTTAGTTCAACAACATATTAAGAATGTGAAAATTCAAATCCCTAACATCTCGAAAAAGGTATGTATCTTACCTATTTGAATTATATGCTCACATTTGCAACTTTTAAGTTTTAATATAGCTTGTTTCTATGTTTCATATTTTATATTAATGTATTGAAAACATATTTACATGTGAGGTAGATAGATAACAAATATATTGGGTTGTTAATTTTTTAAAAGCTCATAAATTAATATCAACACTTCTAATGTTCAGATTCAAAGTGTATTTTTTACAATTTATAGTCTAAAATATTTCTTAAAAAAAGTTATAGTCTAAAACTAAAATAAGCTTGAAAATTTAAAAAGTAAATGAAATTTAAAGCTTGTTATTAATATTTATTCATGTGGCAAATAAATAAGCCTCCCCTAATAAAATAGTAATTTATAGTAACGTGATTAAATATGAATGGAATATTTGTTCTATTAATGTTTTTTTTTTTTCCTACTAAGATTTTAATTTATTATTTGGTCCCTACCAGGAGAGAGAATACAAAGAAGTCCTAGATTTATTTAACGAGAAGAACAAAGAGAAATCTCAATTGGTAGCCAAACTAATGGAGGTGAATTTTACTTCTTTCCTTTCCTTAATTATATTGATTATTCTGTTTTTCACAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGCGTTTAGAAATTCTCATAAAACTCCAAGCATAATTATTATTAAATCCTCTAAAATTATCTTACATAATTCTTAATCAGATTAAGATCCGTTTGGTTTATTTAAGAAAAAAATGTTTTTTCAAAAAGGATAATTATTTTAAATGACAAAATTGTTGAAAATATTTACAATTAATAGTAAAATACACCGTCTATCTACAATAAATTGCAATAAATCACGATAGACTACTATCTGTGTCTATCATGACACAGATGATAATCTATCGTGATCTATTGCGGTCTATAGCAGATAGACAGTGAAATTTTGCTATATTTGTAAATATTGTGGTTTCTTTTGCTATATTGGAAAATAGCCTTCAAAAATTTCATTTTTATTTAAATTCTTTTGATAAAAACTATTTAAAATATACTTCAAAATCTATTTGAATAGTTGTCAAATACGTCAATTTTTTCTAAATTAAATTATTTTTTAAATTAAACACTTGAAAATGTATTAAAAAACGTAAGAACCCATTTATGGAAAAAGATTTTCCATAAAAAAAATTTCAAATTTTCCATTTATGTTAAAATTCATTATTTTATTTATTCATTTCATTTAATAAGAAAATCATTTGTCAATAGAAACTTTTTTGGTTTTCCAATTAAAAAATAAAATAAAATTAAAAAAAAAAAAAAAAAAAAAAAACTCCATTAACCTTTCTCATTTCCTCACTTTTTTTTTTCCAACTGGACAAAAGCCATCTGAAGAGAGAGAAAGTGAGAGAAAGTGATGAAAACAACCTTTCGAATAAAATATCTTTATTTTAAATCAATAATGTGTTAAAATTAAATTATCTTAAATGATAAAATTGTTAAAAATATTTATAACTAATAACAAAATACATCGTTTATTTGTGATAAAAAGTGATAGATTGCAATAGACTACTATTTGTATCTATCGTGACACAAATAATAGTTTATCGCAATGTATCGCAGATAGATAGTGAAATTTTATCAATATTTTAATTTATTTTTTTTTTGCTATATTTGAAAAGGATCCTAATGCAAATGTTAATGAATAAAGAAAATATTTCTTCTCTTTTTTCTTCTATGGGTATATTTACTTATTTAGGAACTCTTTAAAAAGAACGTGTTGCTATATTGGATGCTCGAACAATATAATAATATCACTATTATGTATATGTTGATATATTTTTGTTTTAATTATAGTATAGAAAATATATTCTTTTTTTATATTAAATATGTATAGAATACATATCTGTTTTTAATGAATATATACCTTCTAAATAAATAAAAAAAATATTTTAAATAACAAAACTGCTGAAAATATTTACAAATAATGACAAAATATTATAATATATTTGTGATAGACTGCGACAAATTACTATCTATGTCTATCATGACACAGATAGACATGTATAGTAGTATATTGCGGTCTATCGCAAATAAATAATAAAAATTTGCTAAATTATAAATATTTTAGTTATTTTTTTACATTTTAAAACAATCTAAATAAATTTAGAGAATAAATTTTTAACTTTTAACTTCATTAAACATCTCAGTTAAACATCTCAATCAATAGTGAACGAATTATAAAAATCTAAGCCACATAAAATAACTGATGTGATAAAGTACACTTTATGTAAAAACATATTTTAACATATGTTCTACAATTCATTTTAATTGTTTATTTTAAAATTTTGTTTAAGTTTTTCGGAACATTCCTAATTTAATATAATTAATTTTTATTTAATAACATAAAAAGAATGGATTAAATTTAATATTTTTCTGTAAAGAATAAATATAATATGATTGTTTTTAAGTCTTATTTATGCAACTGTCTCATAAGACAAAGATAAATTTATATAGCTAAATTATTAGTTTTTCTATTATTCATTTTTTATAATTAGATTAAAAGTAATGGTTTTAAATAGCAATACTGTTGAAAATATTTTTAGATATATAGTAAAAAAAAAAAATAGCAACAAAAACAAAGACCTTTTTTTAACTAATTATTTATAAACTACTACCACTTATATATAGACATTGATAGACTATTATCATCTATCACTGTCTATCAGACTATCAATGTCTATTATTAATAGAAAATAATAGATTATTTTTAACCATTTTATTATATTTATAAATAAGTTTGTTAATTCTGTTATATGAAAACAACTAAAAGATTAAGTAAATGATTACAATTATTATCCATTTAAAGTTGAAAAAAAATGGTATGAATGGTAGAGTTGATTACTAACATATTTTTATGGTATATTTGAATAATTTGGTCAGTTGGTGAATGAGAGCGAAAAATTGAGGATGAAGAAGCTGGAAGAGCTGAGCAAGAACATTGACATCCTTCATTAAGAAAATTGTTTTTCTAAGTTTTAACTCAAATTAATCACCAACTTTGTTTGTATTTCAACATTTTGTTTCTCCTTCTCATTACAATTTTTTTTCTTAAAGTTTCTCATGGAAAAAAAAAAAAAAAACCGAAGGAGAAAAAAAAGAAAATTTTAACATCACCAAGGTTAATGTGACATTTTGCTTGTATTAATAAGTTTCACGACCACTAGTGCTGTTGATATAGTGTGATCCGTGTTATTTGACAATGATTTTCACATTTCATGTTGCAATTTCTTTTCTTTACTCAAACTTTTCTGAATAATTGAAGACACGTAATTTACTTTGTTAGCTATTAGTTCTTCATATGATAATGG

mRNA sequence

GAAGACTCATGAATGAGCTAAGAGGACGCATGGAATAATCTAATAGTAATAGTCCATGGAGGACCCAACATTACCATGGAGGTCCTATTAGTAGATTCATGAAAGACATTTGCAAAACCAAGTGCTACTCTTGGAGGTCCTACCAGTACCATGTAGGACTTCTGCAAAAAGACTTAGTAGTAGTCCATAGAGGACCCATGGACCCCTGTAAGAACCCAGGAGGACCTAATGGTACCATGGAAGTCGTAGTGGTGCCATGAAGAAACTTCGTAAAGAACCTCACAATATCATGGACGTCCTAGCAGTACCATAGAAGACCTCTCCAGGATCAATGGAGGACTTAACAATACCGAGCGAGTGAGGGATTGACTGTCGTTTTAGGTAGTGGTGTAGTAACCACCTGAAGAGTAAAGACTCAATGGTTTCATGGTAGTGGCAAGCCTAATTGTCTGTTACAATATACTAAGCCTATATAAATGACATAAATCATTTGTCAAAGGTACGTTAAAAAATATTCTCAGCTACTCTCTACTACCAGTACCCATCTCAACTCGTTACTAACTTGAGCGTCAGAATGTCAATGACTTGACACCACATTTCGGTTCAATTTCCTTTGTTTTGCAAGACACTTATGTTATTTTCTCCCAAAAAAATACAAATTGCTAGTTGGACCATCATTCGGTAGCAACACTTTTAAAAAGGTGACTATTTTCGTTCCTATACTTCTAAAAGGTAACCATTTGGTCCCTTCATCTTCAATTTTTTTTCATTTTTAAAGGACCAAAATGGTCATTTCTTAAAAGTATATGAACCAAAATGAACTAAAGTTAAAGGTATAAGGCCTTATTTTACACTTTAAAAATATGAGGACCAGAATGAATCAAAATCAAAATTATAAGAACGAAAATGAACATTTTAAAAGCAAAATAACCAAAATGAACTAAAATCAACCGTTCATAGACCAAAGCAATATTTAAACCATATTTATATTTCTTGCAAATACAATTTTAAGAAGGTTTGGTGACAGATTCTTTACAAGGTGCTAAAGAAAGGTCTTAATAAGAAAAGGAAAAGGTGAGAGAACTTTCTTGCAAGTAAGTAAAGTAATAATAATAATAATAAGGGGACAAAAAGAGAAGCAGCCTTTTTGCAGTTCTGCTGTTACCCATCTCTCCAACTCAGTCTTGGTTTTTAAGGCTTTTTCCCCCTTATATTCATTTCATTTCATACTCAGTGCAGGTAACACCTTACTCTCCACTCCATGACAAAACTTATATCCCAAGCACCTGCAATTCAATTCCTTTAAAGCCATTGCGGCGCTTAGGGTTTGGCTACCTAACTGAGAAAGATAATCATCATTTGCGAGAGAGATTGGGTATGACGACGACGCAGAAACAGAGCTGGGAAGCGCAACAATCGCAGCAGATGCAGAGGGTGAAAAGCTCGGGGATGATAAGCAGCCATGCGAATGCGATTGGGAGTCCGGTGAAGGAGGATCAAGAGGAGGAGCTTTCTCGATCGGCTTTAGCTCTGTTTAGGGCTAAGGAAGAGGAGATCGAGAGGAAGAAGATGGAGATGAGAGAGAAGGTGGAAGCTCGCCTTGGAAGAGCTGAAGAAGCGACGAAGCGATTGGCGGAGATTCGCGAAGAACTTGAAGGAATGACGGATCCGATGAGGAAGGAAGTTTCGTTCATACGGAAGAAGATTGATTTGGTGAACAAAGAGTTGAAGCCATTGGGACTCACTTGCCAAAAGAAGGAGAGAGAATACAAAGAAGTCCTAGATTTATTTAACGAGAAGAACAAAGAGAAATCTCAATTGGTAGCCAAACTAATGGAGTTGGTGAATGAGAGCGAAAAATTGAGGATGAAGAAGCTGGAAGAGCTGAGCAAGAACATTGACATCCTTCATTAAGAAAATTGTTTTTCTAAGTTTTAACTCAAATTAATCACCAACTTTGTTTGTATTTCAACATTTTGTTTCTCCTTCTCATTACAATTTTTTTTCTTAAAGTTTCTCATGGAAAAAAAAAAAAAAAACCGAAGGAGAAAAAAAAGAAAATTTTAACATCACCAAGGTTAATGTGACATTTTGCTTGTATTAATAAGTTTCACGACCACTAGTGCTGTTGATATAGTGTGATCCGTGTTATTTGACAATGATTTTCACATTTCATGTTGCAATTTCTTTTCTTTACTCAAACTTTTCTGAATAATTGAAGACACGTAATTTACTTTGTTAGCTATTAGTTCTTCATATGATAATGG

Coding sequence (CDS)

ATGACGACGACGCAGAAACAGAGCTGGGAAGCGCAACAATCGCAGCAGATGCAGAGGGTGAAAAGCTCGGGGATGATAAGCAGCCATGCGAATGCGATTGGGAGTCCGGTGAAGGAGGATCAAGAGGAGGAGCTTTCTCGATCGGCTTTAGCTCTGTTTAGGGCTAAGGAAGAGGAGATCGAGAGGAAGAAGATGGAGATGAGAGAGAAGGTGGAAGCTCGCCTTGGAAGAGCTGAAGAAGCGACGAAGCGATTGGCGGAGATTCGCGAAGAACTTGAAGGAATGACGGATCCGATGAGGAAGGAAGTTTCGTTCATACGGAAGAAGATTGATTTGGTGAACAAAGAGTTGAAGCCATTGGGACTCACTTGCCAAAAGAAGGAGAGAGAATACAAAGAAGTCCTAGATTTATTTAACGAGAAGAACAAAGAGAAATCTCAATTGGTAGCCAAACTAATGGAGTTGGTGAATGAGAGCGAAAAATTGAGGATGAAGAAGCTGGAAGAGCTGAGCAAGAACATTGACATCCTTCATTAA

Protein sequence

MTTTQKQSWEAQQSQQMQRVKSSGMISSHANAIGSPVKEDQEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH

Homology

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BLAST of CmUC01G012060 vs. NCBI nr
Match: XP_038893849.1 (uncharacterized protein LOC120082661 [Benincasa hispida])

HSP 1 Score: 298.9 bits (764), Expect = 2.9e-77
Identity = 170/177 (96.05%), Postives = 174/177 (98.31%), Query Frame = 0


Query: 3   TTQKQSWEAQQSQQMQRVKSSG-MISSHANAIGSPVKEDQEEELSRSALALFRAKEEEIE 62
           TT KQSWEAQQSQQMQRVK+SG MISS+ NAIGSPVKEDQEEE+SRSALA+FRAKEEEIE
Sbjct: 2   TTPKQSWEAQQSQQMQRVKNSGVMISSNVNAIGSPVKEDQEEEISRSALAVFRAKEEEIE 61

Query: 63  RKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLG 122
           RKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLG
Sbjct: 62  RKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLG 121

Query: 123 LTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH 179
           LTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH
Sbjct: 122 LTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH 178

[Close]

BLAST of CmUC01G012060 vs. NCBI nr
Match: XP_008461743.1 (PREDICTED: probable DNA double-strand break repair Rad50 ATPase [Cucumis melo] >KAA0040914.1 putative DNA double-strand break repair Rad50 ATPase [Cucumis melo var. makuwa] >TYK10622.1 putative DNA double-strand break repair Rad50 ATPase [Cucumis melo var. makuwa])

HSP 1 Score: 287.0 bits (733), Expect = 1.1e-73
Identity = 164/177 (92.66%), Postives = 171/177 (96.61%), Query Frame = 0


Query: 3   TTQKQSWEAQQSQQMQRVKSSGMISSHA-NAIGSPVKEDQEEELSRSALALFRAKEEEIE 62
           TTQKQSWEA   QQMQRVK+SGMISS+  N IGSP+KEDQEEE+SRSALALFRAKEEEIE
Sbjct: 2   TTQKQSWEA---QQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIE 61

Query: 63  RKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLG 122
           RKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLG
Sbjct: 62  RKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLG 121

Query: 123 LTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH 179
           LTCQKKEREYKEVLDLFNEKN+EKSQLV+KLMELVNESEKLRM+KLEELSKNIDILH
Sbjct: 122 LTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH 175

[Close]

BLAST of CmUC01G012060 vs. NCBI nr
Match: XP_004139478.1 (uncharacterized protein LOC101203874 [Cucumis sativus] >KGN64906.1 hypothetical protein Csa_022823 [Cucumis sativus])

HSP 1 Score: 285.0 bits (728), Expect = 4.3e-73
Identity = 165/177 (93.22%), Postives = 170/177 (96.05%), Query Frame = 0


Query: 3   TTQKQSWEAQQSQQMQRVKSSGMISSHAN--AIGSPVKEDQEEELSRSALALFRAKEEEI 62
           TTQKQSWEA   QQMQRVK+SGMISS+ N   IGSP+KEDQEEE+SRSALALFRAKEEEI
Sbjct: 2   TTQKQSWEA---QQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEI 61

Query: 63  ERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPL 122
           ERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPL
Sbjct: 62  ERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPL 121

Query: 123 GLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDIL 178
           GLTCQKKEREYKEVLDLFNEKNKEKSQLV+KLMELVNESEKLRMKKLEELSKNIDIL
Sbjct: 122 GLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL 175

[Close]

BLAST of CmUC01G012060 vs. NCBI nr
Match: XP_022142637.1 (uncharacterized protein LOC111012700 [Momordica charantia])

HSP 1 Score: 283.5 bits (724), Expect = 1.3e-72
Identity = 162/177 (91.53%), Postives = 169/177 (95.48%), Query Frame = 0


Query: 3   TTQKQSWEAQ-QSQQMQRVKSSGMISSHANAIGSPVKEDQEEELSRSALALFRAKEEEIE 62
           TTQKQSWEAQ Q  QMQRV++SGMI SH NAIGSP+KEDQ+EELSRSA ALFRAKEEEIE
Sbjct: 2   TTQKQSWEAQAQQSQMQRVRNSGMI-SHVNAIGSPLKEDQDEELSRSAFALFRAKEEEIE 61

Query: 63  RKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLG 122
           RKKMEMR+KVEARLGRAEEATKRLAEIREELE M DPMRKEVSFIRKKIDLVNKELKPLG
Sbjct: 62  RKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRKEVSFIRKKIDLVNKELKPLG 121

Query: 123 LTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH 179
           LTCQKKEREYKEVL+LFNEKN+EKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH
Sbjct: 122 LTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH 177

[Close]

BLAST of CmUC01G012060 vs. NCBI nr
Match: XP_022970344.1 (uncharacterized protein LOC111469338 [Cucurbita maxima])

HSP 1 Score: 270.0 bits (689), Expect = 1.4e-68
Identity = 156/176 (88.64%), Postives = 159/176 (90.34%), Query Frame = 0


Query: 3   TTQKQSWEAQQSQQMQRVKSSGMISSHANAIGSPVKEDQEEELSRSALALFRAKEEEIER 62
           TTQKQSWEAQQSQ  QRVK          AIGSP +EDQEEELSRSALALFRAKEEEIER
Sbjct: 2   TTQKQSWEAQQSQMQQRVK---------KAIGSPAREDQEEELSRSALALFRAKEEEIER 61

Query: 63  KKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGL 122
           KKMEMREKVE RLGRAEEATKRLAEIREELEGMTDPMRKEVS IRKKIDLVNKELKPLG+
Sbjct: 62  KKMEMREKVENRLGRAEEATKRLAEIREELEGMTDPMRKEVSLIRKKIDLVNKELKPLGI 121

Query: 123 TCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH 179
           TCQKKEREYKEVL+L NEKNKEKSQLVAKLMELVNESEKLRMKKLEELS NIDILH
Sbjct: 122 TCQKKEREYKEVLELLNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSNNIDILH 168

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BLAST of CmUC01G012060 vs. ExPASy TrEMBL
Match: A0A5D3CH78 (RAB6-interacting golgin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G001010 PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 5.5e-74
Identity = 164/177 (92.66%), Postives = 171/177 (96.61%), Query Frame = 0


Query: 3   TTQKQSWEAQQSQQMQRVKSSGMISSHA-NAIGSPVKEDQEEELSRSALALFRAKEEEIE 62
           TTQKQSWEA   QQMQRVK+SGMISS+  N IGSP+KEDQEEE+SRSALALFRAKEEEIE
Sbjct: 2   TTQKQSWEA---QQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIE 61

Query: 63  RKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLG 122
           RKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLG
Sbjct: 62  RKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLG 121

Query: 123 LTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH 179
           LTCQKKEREYKEVLDLFNEKN+EKSQLV+KLMELVNESEKLRM+KLEELSKNIDILH
Sbjct: 122 LTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH 175

[Close]

BLAST of CmUC01G012060 vs. ExPASy TrEMBL
Match: A0A1S3CFV6 (RAB6-interacting golgin OS=Cucumis melo OX=3656 GN=LOC103500274 PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 5.5e-74
Identity = 164/177 (92.66%), Postives = 171/177 (96.61%), Query Frame = 0


Query: 3   TTQKQSWEAQQSQQMQRVKSSGMISSHA-NAIGSPVKEDQEEELSRSALALFRAKEEEIE 62
           TTQKQSWEA   QQMQRVK+SGMISS+  N IGSP+KEDQEEE+SRSALALFRAKEEEIE
Sbjct: 2   TTQKQSWEA---QQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIE 61

Query: 63  RKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLG 122
           RKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLG
Sbjct: 62  RKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLG 121

Query: 123 LTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH 179
           LTCQKKEREYKEVLDLFNEKN+EKSQLV+KLMELVNESEKLRM+KLEELSKNIDILH
Sbjct: 122 LTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH 175

[Close]

BLAST of CmUC01G012060 vs. ExPASy TrEMBL
Match: A0A0A0LY59 (RAB6-interacting golgin OS=Cucumis sativus OX=3659 GN=Csa_1G153510 PE=3 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.1e-73
Identity = 165/177 (93.22%), Postives = 170/177 (96.05%), Query Frame = 0


Query: 3   TTQKQSWEAQQSQQMQRVKSSGMISSHAN--AIGSPVKEDQEEELSRSALALFRAKEEEI 62
           TTQKQSWEA   QQMQRVK+SGMISS+ N   IGSP+KEDQEEE+SRSALALFRAKEEEI
Sbjct: 2   TTQKQSWEA---QQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEI 61

Query: 63  ERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPL 122
           ERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPL
Sbjct: 62  ERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPL 121

Query: 123 GLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDIL 178
           GLTCQKKEREYKEVLDLFNEKNKEKSQLV+KLMELVNESEKLRMKKLEELSKNIDIL
Sbjct: 122 GLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL 175

[Close]

BLAST of CmUC01G012060 vs. ExPASy TrEMBL
Match: A0A6J1CNF1 (RAB6-interacting golgin OS=Momordica charantia OX=3673 GN=LOC111012700 PE=3 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 6.1e-73
Identity = 162/177 (91.53%), Postives = 169/177 (95.48%), Query Frame = 0


Query: 3   TTQKQSWEAQ-QSQQMQRVKSSGMISSHANAIGSPVKEDQEEELSRSALALFRAKEEEIE 62
           TTQKQSWEAQ Q  QMQRV++SGMI SH NAIGSP+KEDQ+EELSRSA ALFRAKEEEIE
Sbjct: 2   TTQKQSWEAQAQQSQMQRVRNSGMI-SHVNAIGSPLKEDQDEELSRSAFALFRAKEEEIE 61

Query: 63  RKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLG 122
           RKKMEMR+KVEARLGRAEEATKRLAEIREELE M DPMRKEVSFIRKKIDLVNKELKPLG
Sbjct: 62  RKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRKEVSFIRKKIDLVNKELKPLG 121

Query: 123 LTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH 179
           LTCQKKEREYKEVL+LFNEKN+EKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH
Sbjct: 122 LTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH 177

[Close]

BLAST of CmUC01G012060 vs. ExPASy TrEMBL
Match: A0A6J1I589 (RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111469338 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 7.0e-69
Identity = 156/176 (88.64%), Postives = 159/176 (90.34%), Query Frame = 0


Query: 3   TTQKQSWEAQQSQQMQRVKSSGMISSHANAIGSPVKEDQEEELSRSALALFRAKEEEIER 62
           TTQKQSWEAQQSQ  QRVK          AIGSP +EDQEEELSRSALALFRAKEEEIER
Sbjct: 2   TTQKQSWEAQQSQMQQRVK---------KAIGSPAREDQEEELSRSALALFRAKEEEIER 61

Query: 63  KKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGL 122
           KKMEMREKVE RLGRAEEATKRLAEIREELEGMTDPMRKEVS IRKKIDLVNKELKPLG+
Sbjct: 62  KKMEMREKVENRLGRAEEATKRLAEIREELEGMTDPMRKEVSLIRKKIDLVNKELKPLGI 121

Query: 123 TCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH 179
           TCQKKEREYKEVL+L NEKNKEKSQLVAKLMELVNESEKLRMKKLEELS NIDILH
Sbjct: 122 TCQKKEREYKEVLELLNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSNNIDILH 168

[Close]

BLAST of CmUC01G012060 vs. TAIR 10
Match: AT2G27740.1 (Family of unknown function (DUF662) )

HSP 1 Score: 195.3 bits (495), Expect = 4.2e-50
Identity = 111/173 (64.16%), Postives = 146/173 (84.39%), Query Frame = 0


Query: 4   TQKQSWEAQQSQQMQRVKSSGMISSHANAIGSPVKEDQEEELSRSALALFRAKEEEIERK 63
           T +Q  E  QS  +QR+KSSG IS +    GSP+ +++EEELS+SA ALF+AKE+EIER+
Sbjct: 3   TTRQILEQPQSPFIQRIKSSGNISMN----GSPMIDEKEEELSQSAFALFKAKEDEIERR 62

Query: 64  KMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLT 123
           KME++++V+ +LG AEEAT+RLAEIREELE +TDPMRKE+S IRK++D +N+ELKPLG +
Sbjct: 63  KMEVKDRVQKKLGLAEEATRRLAEIREELEALTDPMRKEISAIRKRVDAINRELKPLGQS 122

Query: 124 CQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDI 177
           CQ+KERE+KE L+ +NEKNKEK+  V+KL+ELV ESEKLRM KLEELSK+I+I
Sbjct: 123 CQRKEREFKEALEAYNEKNKEKAIFVSKLVELVTESEKLRMTKLEELSKSIEI 171

[Close]

BLAST of CmUC01G012060 vs. TAIR 10
Match: AT3G09980.1 (Family of unknown function (DUF662) )

HSP 1 Score: 192.2 bits (487), Expect = 3.6e-49
Identity = 104/138 (75.36%), Postives = 123/138 (89.13%), Query Frame = 0


Query: 41  QEEELSRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMR 100
           ++EE+SR+AL+ FRAKEEEIE+KKME+RE+V+A+LGR EE TKRLA IREELEG+ DPMR
Sbjct: 41  EDEEMSRTALSAFRAKEEEIEKKKMEIRERVQAQLGRVEEETKRLALIREELEGLADPMR 100

Query: 101 KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESE 160
           KEV+ +RKKID VNKELKPLG T QKKEREYKE L+ FNEKN+EK QL+ +LMELV ESE
Sbjct: 101 KEVAMVRKKIDSVNKELKPLGHTVQKKEREYKEALEAFNEKNREKVQLITRLMELVGESE 160

Query: 161 KLRMKKLEELSKNIDILH 179
           K+RMKKLEELSKNID +H
Sbjct: 161 KMRMKKLEELSKNIDSIH 178

[Close]

BLAST of CmUC01G012060 vs. TAIR 10
Match: AT3G52920.2 (Family of unknown function (DUF662) )

HSP 1 Score: 181.8 bits (460), Expect = 4.8e-46
Identity = 112/175 (64.00%), Postives = 136/175 (77.71%), Query Frame = 0


Query: 1   MTTTQKQSWEAQQSQQMQRVKSSGMISSHANAIGSPVKEDQEEELSRSALALFRAKEEEI 60
           MTTT + +   Q  QQM  +  S  +S          KED  EE++RSAL+ FRAKE+EI
Sbjct: 1   MTTTNEAT--TQPPQQMMSLSFSSQMS----------KED--EEMARSALSAFRAKEDEI 60

Query: 61  ERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPL 120
           E++KME+RE+V+A+LGR EE T+RLA IREELE M DPMRKEV+++RKKID VNKELKPL
Sbjct: 61  EKRKMEVRERVKAQLGRVEEETRRLASIREELETMADPMRKEVNWVRKKIDSVNKELKPL 120

Query: 121 GLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNID 176
           G T QKKEREYKE LD FNEKN+EK QL+ KLMELV ESEKLR+KKL+ELS++ID
Sbjct: 121 GSTVQKKEREYKEALDTFNEKNREKVQLITKLMELVGESEKLRLKKLDELSRSID 161

[Close]

BLAST of CmUC01G012060 vs. TAIR 10
Match: AT2G36410.2 (Family of unknown function (DUF662) )

HSP 1 Score: 179.9 bits (455), Expect = 1.8e-45
Identity = 108/172 (62.79%), Postives = 132/172 (76.74%), Query Frame = 0


Query: 4   TQKQSWEAQQSQQMQRVKSSGMISSHANAIGSPVKEDQEEELSRSALALFRAKEEEIERK 63
           +Q Q    QQS +M     S   SSH +         ++EE++RSAL+ FRAKE+EIE++
Sbjct: 27  SQPQPQPQQQSNEMVLHTGSLSFSSHMSR--------EDEEMTRSALSAFRAKEDEIEKR 86

Query: 64  KMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLT 123
           +ME+RE+++A+LGR E+ TKRL+ IREELE M DPMRKEVS +RKKID VNKELKPLG T
Sbjct: 87  RMEVRERIQAQLGRVEQETKRLSTIREELESMADPMRKEVSVVRKKIDSVNKELKPLGST 146

Query: 124 CQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNID 176
            QKKEREYKE LD FNEKN+EK QL+ KLMELV ESEKLRM KLEELSK+I+
Sbjct: 147 VQKKEREYKEALDTFNEKNREKVQLITKLMELVGESEKLRMIKLEELSKSIE 190

[Close]

BLAST of CmUC01G012060 vs. TAIR 10
Match: AT3G52920.1 (Family of unknown function (DUF662) )

HSP 1 Score: 176.4 bits (446), Expect = 2.0e-44
Identity = 112/178 (62.92%), Postives = 136/178 (76.40%), Query Frame = 0


Query: 1   MTTTQKQSWEAQQSQQMQRVKSSGMISSHANAIGSPVKEDQEEELSRSALALFRAKEEEI 60
           MTTT + +   Q  QQM  +  S  +S          KED  EE++RSAL+ FRAKE+EI
Sbjct: 1   MTTTNEAT--TQPPQQMMSLSFSSQMS----------KED--EEMARSALSAFRAKEDEI 60

Query: 61  ERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPL 120
           E++KME+RE+V+A+LGR EE T+RLA IREELE M DPMRKEV+++RKKID VNKELKPL
Sbjct: 61  EKRKMEVRERVKAQLGRVEEETRRLASIREELETMADPMRKEVNWVRKKIDSVNKELKPL 120

Query: 121 GLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLME---LVNESEKLRMKKLEELSKNID 176
           G T QKKEREYKE LD FNEKN+EK QL+ KLME   LV ESEKLR+KKL+ELS++ID
Sbjct: 121 GSTVQKKEREYKEALDTFNEKNREKVQLITKLMEMGQLVGESEKLRLKKLDELSRSID 164

The following BLAST results are available for this feature:

BLAST of CmUC01G012060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893849.1	2.9e-77	96.05	uncharacterized protein LOC120082661 [Benincasa hispida]	[more]
XP_008461743.1	1.1e-73	92.66	PREDICTED: probable DNA double-strand break repair Rad50 ATPase [Cucumis melo] >...	[more]
XP_004139478.1	4.3e-73	93.22	uncharacterized protein LOC101203874 [Cucumis sativus] >KGN64906.1 hypothetical ...	[more]
XP_022142637.1	1.3e-72	91.53	uncharacterized protein LOC111012700 [Momordica charantia]	[more]
XP_022970344.1	1.4e-68	88.64	uncharacterized protein LOC111469338 [Cucurbita maxima]	[more]

BLAST of CmUC01G012060 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC01G012060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CH78	5.5e-74	92.66	RAB6-interacting golgin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CFV6	5.5e-74	92.66	RAB6-interacting golgin OS=Cucumis melo OX=3656 GN=LOC103500274 PE=3 SV=1	[more]
A0A0A0LY59	2.1e-73	93.22	RAB6-interacting golgin OS=Cucumis sativus OX=3659 GN=Csa_1G153510 PE=3 SV=1	[more]
A0A6J1CNF1	6.1e-73	91.53	RAB6-interacting golgin OS=Momordica charantia OX=3673 GN=LOC111012700 PE=3 SV=1	[more]
A0A6J1I589	7.0e-69	88.64	RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111469338 PE=3 SV=1	[more]

BLAST of CmUC01G012060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27740.1	4.2e-50	64.16	Family of unknown function (DUF662)	[more]
AT3G09980.1	3.6e-49	75.36	Family of unknown function (DUF662)	[more]
AT3G52920.2	4.8e-46	64.00	Family of unknown function (DUF662)	[more]
AT2G36410.2	1.8e-45	62.79	Family of unknown function (DUF662)	[more]
AT3G52920.1	2.0e-44	62.92	Family of unknown function (DUF662)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 50..91
None	No IPR available	COILS	Coil	Coil	coord: 124..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	PANTHER	PTHR21470:SF16	SUBFAMILY NOT NAMED	coord: 10..177
IPR007033	RAB6-interacting golgin	PFAM	PF04949	Transcrip_act	coord: 32..175 e-value: 1.3E-70 score: 236.2
IPR007033	RAB6-interacting golgin	PANTHER	PTHR21470	RAB6-INTERACTING PROTEIN GORAB	coord: 10..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC01G012060.1	CmUC01G012060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005794	Golgi apparatus