CmUC01G009560 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCGTGAGTGAACATAAATCGAACACACCACCCACTGTGGAATCAAAAGACTCATCTGTGCATTTAAGATATGTCTTTCTAGGAGAGTCTTCTACTTATCCAGTCATAATTTCTTCAAAATTGAATGAAGTATACGAGGCAAAATTATTAAGAGTCTTGCAGGAGCATGAGTGAGCTTTAGGGCGGTGATCAATTAGCGATTTGAAAGGTATCAGTCCATCTATTGTGATGCACAAAATACTAGTGGATGATTCCTATAGTCCTTCAATTGAGCATCGGAGAAGGCTTAATCCGACAATGAAAGAGGTAGTAAAGGCCGAAGTTCTTAAATTGCTAAATGCAAGAATTATTTATGCTATATATGATAGTTTCTTGGTGAGTCTAGTGCAGGTAGTACTAAAAGAAGGGTGGGAAGACAGTAGTGAAAAATGAGAATAATGAAAGTGTTCCCACCAGAATGGTGTCACACCCCCTTCTAGATTAATCTCTTTAACCCAAAAGAAGGTGTAAAGACAACAAATATCACCCTTTTGTGACGCTTACTGCCTGTCTCATAATATTCTCATACAATCACCTATACCAAAGCTTAAGAAGCAAGTATGGAACAACCAACAATTCTTTTAAACAATTATACAAGTCCATATTACAACATATTTTGTAGCCCAATTGTATCTGGTCAAAGAAAAACTATCCTATGCATACCTCGACTGTAAGCCCTACCTTCATTCCCAAGAACTTAACTTTCTTGGGAGAGTTGGCGAGCAAGTAGGCGGGTAGTTGAGATGGGAAGTAGCCAAGAGCCTTGTTATGAAATAATCGAGTGGTGTATTATAGGTGTGGCTGGCAAGAAAATTGGCTAAGTGTTGGAGCATGTGTTTAAGACCTTGAGTAGTCGAGCCACCAAAAGTGTGAGTGATGCGGGCTTAGAGGATGGGCTGAAGGATGCGTCTTTCTTGGTGAAGGATGCGTCCATAGTGAGTTGGTTGAAGGCTTTTGACGCATTGCTTGATGGGCAAGTTGGGCTAGGCGTCCATGGCTTGGATGCGTTGGTTGAGGTAGTAAGAGGGCATGGTACATTGAGGCTATATGTCCAAGGAAGGCTTGTGAGGCTGAAGCATGGGGCAATGCGTCCAAGTCAACAACCATCAGCCAAGGGGTTGTGTGCAATGGATAGCTGAGAAGACTAGGTTGTACGTGCAGCCAAGCTAAACCAGTGGCCGAAAGTAAGAATCTATTGAGGTTATTTTGTGTTTTGCACTCCCAGGAGGTGGGCTAACACGCTTCCGGCTATGCGACCATGCATGCTGA ATGTCCGTGAGTGAACATAAATCGAACACACCACCCACTGTGGAATCAAAAGACTCATCTGTGCATTTAAGATATGTCTTTCTAGGAGAGTCTTCTACTTATCCAGTCATAATTTCTTCAAAATTGAATGAAGTATACGAGGCAAAATTATTAAGAGTCTTGCAGGAGCATGATCCATCTATTGTGATGCACAAAATACTAGTGGATGATTCCTATAGTCCTTCAATTGAGCATCGGAGAAGGCTTAATCCGACAATGAAAGAGGTAGTAAAGGCCGAAGTTCTTAAATTGCTAAATGCAAGAATTATTTATGCTATATATGATAGTTTCTTGGTGAGTCTAGTGCAGATTAATCTCTTTAACCCAAAAGAAGGTGTAAAGACAACAAATATCACCCTTTTTAGGCGGGTAGTTGAGATGGGAAGTAGCCAAGAGCCTTGTTATGAAATAATCGAGTGGTGTATTATAGGTACCTTGAGTAGTCGAGCCACCAAAAGTGTGAGTGATGCGGGCTTAGAGGATGGGCTGAAGGATGCGTCTTTCTTGGTGAAGGATGCGTCCATAGTGAGTTGGTTGAAGGCTTTTGACGCATTGCTTGATGGGCAAGTTGGGCTAGGCGTCCATGGCTTGGATGCGTTGGTTGAGGTAGTAAGAGGGCATGGTACATTGAGGCTATATGTCCAAGGAAGGCTTGTGAGGCTGAAGCATGGGGCAATGCGTCCAAGTCAACAACCATCAGCCAAGGGCCAAGCTAAACCAGTGGCCGAAAGAGGTGGGCTAACACGCTTCCGGCTATGCGACCATGCATGCTGA ATGTCCGTGAGTGAACATAAATCGAACACACCACCCACTGTGGAATCAAAAGACTCATCTGTGCATTTAAGATATGTCTTTCTAGGAGAGTCTTCTACTTATCCAGTCATAATTTCTTCAAAATTGAATGAAGTATACGAGGCAAAATTATTAAGAGTCTTGCAGGAGCATGATCCATCTATTGTGATGCACAAAATACTAGTGGATGATTCCTATAGTCCTTCAATTGAGCATCGGAGAAGGCTTAATCCGACAATGAAAGAGGTAGTAAAGGCCGAAGTTCTTAAATTGCTAAATGCAAGAATTATTTATGCTATATATGATAGTTTCTTGGTGAGTCTAGTGCAGATTAATCTCTTTAACCCAAAAGAAGGTGTAAAGACAACAAATATCACCCTTTTTAGGCGGGTAGTTGAGATGGGAAGTAGCCAAGAGCCTTGTTATGAAATAATCGAGTGGTGTATTATAGGTACCTTGAGTAGTCGAGCCACCAAAAGTGTGAGTGATGCGGGCTTAGAGGATGGGCTGAAGGATGCGTCTTTCTTGGTGAAGGATGCGTCCATAGTGAGTTGGTTGAAGGCTTTTGACGCATTGCTTGATGGGCAAGTTGGGCTAGGCGTCCATGGCTTGGATGCGTTGGTTGAGGTAGTAAGAGGGCATGGTACATTGAGGCTATATGTCCAAGGAAGGCTTGTGAGGCTGAAGCATGGGGCAATGCGTCCAAGTCAACAACCATCAGCCAAGGGCCAAGCTAAACCAGTGGCCGAAAGAGGTGGGCTAACACGCTTCCGGCTATGCGACCATGCATGCTGA MSVSEHKSNTPPTVESKDSSVHLRYVFLGESSTYPVIISSKLNEVYEAKLLRVLQEHDPSIVMHKILVDDSYSPSIEHRRRLNPTMKEVVKAEVLKLLNARIIYAIYDSFLVSLVQINLFNPKEGVKTTNITLFRRVVEMGSSQEPCYEIIEWCIIGTLSSRATKSVSDAGLEDGLKDASFLVKDASIVSWLKAFDALLDGQVGLGVHGLDALVEVVRGHGTLRLYVQGRLVRLKHGAMRPSQQPSAKGQAKPVAERGGLTRFRLCDHAC Homology
BLAST of CmUC01G009560 vs. NCBI nr
Match: PON94567.1 (LOW QUALITY PROTEIN: hypothetical protein TorRG33x02_096020 [Trema orientale]) HSP 1 Score: 130.2 bits (326), Expect = 2.7e-26 Identity = 77/132 (58.33%), Postives = 88/132 (66.67%), Query Frame = 0
BLAST of CmUC01G009560 vs. NCBI nr
Match: XP_023874613.1 (uncharacterized protein LOC111987139 [Quercus suber]) HSP 1 Score: 123.2 bits (308), Expect = 3.3e-24 Identity = 73/140 (52.14%), Postives = 89/140 (63.57%), Query Frame = 0
BLAST of CmUC01G009560 vs. NCBI nr
Match: XP_022865871.1 (uncharacterized protein LOC111385680 [Olea europaea var. sylvestris]) HSP 1 Score: 122.9 bits (307), Expect = 4.3e-24 Identity = 72/129 (55.81%), Postives = 88/129 (68.22%), Query Frame = 0
BLAST of CmUC01G009560 vs. NCBI nr
Match: XP_024022388.1 (uncharacterized protein LOC112091888 [Morus notabilis]) HSP 1 Score: 122.9 bits (307), Expect = 4.3e-24 Identity = 74/139 (53.24%), Postives = 91/139 (65.47%), Query Frame = 0
BLAST of CmUC01G009560 vs. NCBI nr
Match: XP_022851722.1 (uncharacterized protein K02A2.6-like, partial [Olea europaea var. sylvestris]) HSP 1 Score: 120.9 bits (302), Expect = 1.6e-23 Identity = 70/129 (54.26%), Postives = 88/129 (68.22%), Query Frame = 0
BLAST of CmUC01G009560 vs. ExPASy TrEMBL
Match: A0A2P5F9V5 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_096020 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 1.3e-26 Identity = 77/132 (58.33%), Postives = 88/132 (66.67%), Query Frame = 0
BLAST of CmUC01G009560 vs. ExPASy TrEMBL
Match: A0A1R3GXK0 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_22658 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.0e-23 Identity = 69/129 (53.49%), Postives = 89/129 (68.99%), Query Frame = 0
BLAST of CmUC01G009560 vs. ExPASy TrEMBL
Match: A0A1R3FZW6 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_29836 PE=4 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 2.3e-23 Identity = 69/129 (53.49%), Postives = 88/129 (68.22%), Query Frame = 0
BLAST of CmUC01G009560 vs. ExPASy TrEMBL
Match: A0A6P5U2U9 (uncharacterized protein LOC110774242 OS=Prunus avium OX=42229 GN=LOC110774242 PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 4.0e-23 Identity = 67/128 (52.34%), Postives = 87/128 (67.97%), Query Frame = 0
BLAST of CmUC01G009560 vs. ExPASy TrEMBL
Match: A0A438G8J7 (Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_063695 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 1.2e-22 Identity = 67/131 (51.15%), Postives = 87/131 (66.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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