CmUC01G009020 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC01G009020
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	photosystem I subunit F
Location	CmU531Chr01: 10594667 .. 10596377 (+)
RNA-Seq Expression	CmUC01G009020
Synteny	CmUC01G009020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTGGGTTTGTTCTCTTATCCAAGATAGGAAAAGAGAATCAGAAAGAAAAGGTGTGCCAATTACAACAATCCAACTCAGCTTCCCTTACTCTCTTCATCTTATCCAAAACCTTCTTCTCCACCACTAATCTTATGATCCTCTCTGAATCTAAATCCCTTCCCTCCACACTCTTTCCCCAAATCTCCTTCTTCTTCCTCTTCCTCTTTCTCTTTCTGCAATTCCCAAACCCTTCAAACCCATCACATATCTCTCAACAATGTCTCTCACAATCCCCACTAACCTCTCAAAACCCCTCTTGAAGCCCAAATTGAGTTCCCCATTCCCCTTAAAACCAAAACCCTCTTCATCAATCCTCTGCTCCGCCACTCATAATCAAGATCAAAACCCTTCATCTTCTCTTCAGGCCTTCTCCGCCGCCTTGGCTCTCTCCTCCATCCTCCTCTCCGCCCCTCTCCCCGCCGTTGCCGACATCTCCGGCCTCACCCCCTGCAAGGAATCCAAGCAATTCGCCAAGAGGGAGAAGCAGCAGATCAAGAAACTTCAGTCTTCTTTGAAGAATTACGCCCCCGACAGCGCTCCGGCGCTTGCTCTGAAAGCCACGGTTGAGAAGACGAAGAGACGATTCGCATTTTATGGGAATCAAGGGCTTCTTTGTGGGGCTGATGGGTTGCCTCATTTGATTGTGAGTGGTGACCAGAGGCATTGGGGTGAGTTCATAACTCCTGGGTTCTTGTTCCTTTACATTGCTGGGTGGATTGGATGGGTTGGAAGGAGCTACTTAATCGCCATTAGAGATGATAAGAAGCCTACCCAGAAGGAGATTATCATTGATGTGCCTTTGGCTACCGGTTTGGTCTTCAGAGGCTTCAGCTGGCCTGTTGCTGCTTACAGAGAGCTTGTCAATGGTGAACTCATTGCCAAGGATGTCTAATTCTCCTCCTTCAGGTACTACTCCTATATATATATATATATGTATGTATAATATATGTACTGTAACTTTTAGGTCAATAGAGTATTAGGATAAACGGTTATGTGTTTGGATTGCTAGATTGTCATTTATGTTAGATTTGTTAGATGATATAATATTAAATTTGACTTTAGTCATCAGTTTGAGCTTTTAGATTGTGATTTAACAACATTGCTTTATGCTAATTTTCAAATTCATAAGTGAATGAGAGTTTTTTGAATATGAATAGACTTTGCTATGTTTCTTTAGGAGCTCTCTGTTGTTTCTCTGGCCAATCTTCTCAAGTTTGTTTAGTTTAGTGATTCACATAGTATTAGAGCATATGGTTTTGTGTTTTAATTGTCGTAACATCATTTCCTTCTTAATTGATATTGATATTTGTTTGTTGGTATTAGTGATTTTCGAGTCTTTAATGTAATCTATGTGCTTAAGCTTTGTGATTTAACATGGAAAACACAAAATGGTCTTACGTGTTTATTTATGAGATCTCTCTCTATGTTTTTCCAATGGACAATCTTCTGATTTGGTTCATGTTGTTTTGTTTTGGTTTTGACAGAGATAGGGAAAGTGGAAGAGGGATTGACTTTTGGAGGATATTGAGGAATGGGATGGGGTTTGTGAAATATTTGTGTATTTAATTTGGAAACTTGACATGAGTATATGTAATGGTTGGTTGTGCTGGATACAAGGGCAATCTATTCTTTTCACTTTCCCATTCTTTGTATTCAAAATTTTCTAA

mRNA sequence

ATGAAGTGGCCCAAATTGAGTTCCCCATTCCCCTTAAAACCAAAACCCTCTTCATCAATCCTCTGCTCCGCCACTCATAATCAAGATCAAAACCCTTCATCTTCTCTTCAGGCCTTCTCCGCCGCCTTGGCTCTCTCCTCCATCCTCCTCTCCGCCCCTCTCCCCGCCGTTGCCGACATCTCCGGCCTCACCCCCTGCAAGGAATCCAAGCAATTCGCCAAGAGGGAGAAGCAGCAGATCAAGAAACTTCAGTCTTCTTTGAAGAATTACGCCCCCGACAGCGCTCCGGCGCTTGCTCTGAAAGCCACGGTTGAGAAGACGAAGAGACGATTCGCATTTTATGGGAATCAAGGGCTTCTTTGTGGGGCTGATGGGTTGCCTCATTTGATTGTGAGTGGTGACCAGAGGCATTGGGGTGAGTTCATAACTCCTGGGTTCTTGTTCCTTTACATTGCTGGGTGGATTGGATGGGTTGGAAGGAGCTACTTAATCGCCATTAGAGATGATAAGAAGCCTACCCAGAAGGAGATTATCATTGATGTGCCTTTGGCTACCGGTTTGGTCTTCAGAGGCTTCAGCTGGCCTGTTGCTGCTTACAGAGAGCTTGTCAATGGTGAACTCATTGCCAAGGATGATATTGAGGAATGGGATGGGGTTTGTGAAATATTTGTGTATTTAATTTGGAAACTTGACATGAGTATATGTAATGGTTGGTTGTGCTGGATACAAGGGCAATCTATTCTTTTCACTTTCCCATTCTTTGTATTCAAAATTTTCTAA

Coding sequence (CDS)

ATGAAGTGGCCCAAATTGAGTTCCCCATTCCCCTTAAAACCAAAACCCTCTTCATCAATCCTCTGCTCCGCCACTCATAATCAAGATCAAAACCCTTCATCTTCTCTTCAGGCCTTCTCCGCCGCCTTGGCTCTCTCCTCCATCCTCCTCTCCGCCCCTCTCCCCGCCGTTGCCGACATCTCCGGCCTCACCCCCTGCAAGGAATCCAAGCAATTCGCCAAGAGGGAGAAGCAGCAGATCAAGAAACTTCAGTCTTCTTTGAAGAATTACGCCCCCGACAGCGCTCCGGCGCTTGCTCTGAAAGCCACGGTTGAGAAGACGAAGAGACGATTCGCATTTTATGGGAATCAAGGGCTTCTTTGTGGGGCTGATGGGTTGCCTCATTTGATTGTGAGTGGTGACCAGAGGCATTGGGGTGAGTTCATAACTCCTGGGTTCTTGTTCCTTTACATTGCTGGGTGGATTGGATGGGTTGGAAGGAGCTACTTAATCGCCATTAGAGATGATAAGAAGCCTACCCAGAAGGAGATTATCATTGATGTGCCTTTGGCTACCGGTTTGGTCTTCAGAGGCTTCAGCTGGCCTGTTGCTGCTTACAGAGAGCTTGTCAATGGTGAACTCATTGCCAAGGATGATATTGAGGAATGGGATGGGGTTTGTGAAATATTTGTGTATTTAATTTGGAAACTTGACATGAGTATATGTAATGGTTGGTTGTGCTGGATACAAGGGCAATCTATTCTTTTCACTTTCCCATTCTTTGTATTCAAAATTTTCTAA

Protein sequence

MKWPKLSSPFPLKPKPSSSILCSATHNQDQNPSSSLQAFSAALALSSILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLQSSLKNYAPDSAPALALKATVEKTKRRFAFYGNQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIIDVPLATGLVFRGFSWPVAAYRELVNGELIAKDDIEEWDGVCEIFVYLIWKLDMSICNGWLCWIQGQSILFTFPFFVFKIF

Homology

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BLAST of CmUC01G009020 vs. NCBI nr
Match: XP_038895167.1 (photosystem I reaction center subunit III, chloroplastic [Benincasa hispida])

HSP 1 Score: 399.4 bits (1025), Expect = 2.3e-107
Identity = 200/208 (96.15%), Postives = 203/208 (97.60%), Query Frame = 0


Query: 4   PKLSSPFPLKPKPSSSILCSATHNQDQNPSSSLQAFSAALALSSILLSAPLPAVADISGL 63
           PKLSSP P KPKPSSSILCSAT NQ+QNPSSSLQAFSAALALSSILLSAPLPAVADISGL
Sbjct: 16  PKLSSPLPSKPKPSSSILCSATQNQNQNPSSSLQAFSAALALSSILLSAPLPAVADISGL 75

Query: 64  TPCKESKQFAKREKQQIKKLQSSLKNYAPDSAPALALKATVEKTKRRFAFYGNQGLLCGA 123
           TPCKESKQFAKREKQQIKKL+SSLKNYAPDSAPALALKAT+EKTKRRFAFYGNQGLLCGA
Sbjct: 76  TPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALALKATIEKTKRRFAFYGNQGLLCGA 135

Query: 124 DGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIIDVPL 183
           DGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIR DKKPTQKEIIIDVPL
Sbjct: 136 DGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRGDKKPTQKEIIIDVPL 195

Query: 184 ATGLVFRGFSWPVAAYRELVNGELIAKD 212
           AT LVFRGFSWPVAAYRELVNGELIAKD
Sbjct: 196 ATSLVFRGFSWPVAAYRELVNGELIAKD 223

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BLAST of CmUC01G009020 vs. NCBI nr
Match: XP_004150631.1 (photosystem I reaction center subunit III, chloroplastic [Cucumis sativus] >KGN66911.1 hypothetical protein Csa_006875 [Cucumis sativus])

HSP 1 Score: 390.6 bits (1002), Expect = 1.1e-104
Identity = 195/208 (93.75%), Postives = 201/208 (96.63%), Query Frame = 0


Query: 4   PKLSSPFPLKPKPSSSILCSATHNQDQNPSSSLQAFSAALALSSILLSAPLPAVADISGL 63
           PK SSP  LKPKPSSSILCSA+ NQ+QN SSSLQAFSAALALSSILLSAPLPAVADISGL
Sbjct: 16  PKFSSPLALKPKPSSSILCSASQNQNQNTSSSLQAFSAALALSSILLSAPLPAVADISGL 75

Query: 64  TPCKESKQFAKREKQQIKKLQSSLKNYAPDSAPALALKATVEKTKRRFAFYGNQGLLCGA 123
           TPCKESKQFAKREKQQIKKL+SSLKNYAPDSAPALA+KAT+EKTKRRFAFYG QGLLCGA
Sbjct: 76  TPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTKRRFAFYGKQGLLCGA 135

Query: 124 DGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIIDVPL 183
           DGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD+KKPTQKEIIIDVPL
Sbjct: 136 DGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPL 195

Query: 184 ATGLVFRGFSWPVAAYRELVNGELIAKD 212
           AT LVFRGFSWPVAAYRELVNGELIAKD
Sbjct: 196 ATSLVFRGFSWPVAAYRELVNGELIAKD 223

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BLAST of CmUC01G009020 vs. NCBI nr
Match: XP_008459076.1 (PREDICTED: photosystem I reaction center subunit III, chloroplastic [Cucumis melo] >KAA0043281.1 photosystem I reaction center subunit III [Cucumis melo var. makuwa] >TYK29345.1 photosystem I reaction center subunit III [Cucumis melo var. makuwa])

HSP 1 Score: 386.3 bits (991), Expect = 2.0e-103
Identity = 195/210 (92.86%), Postives = 201/210 (95.71%), Query Frame = 0


Query: 4   PKLSSPFPLKPKPSSSILCSA--THNQDQNPSSSLQAFSAALALSSILLSAPLPAVADIS 63
           PKLSSP  LKPKPSSSILCSA    NQ QNPSSSLQAFSAALALSSILLSAPLPAVADIS
Sbjct: 16  PKLSSPLALKPKPSSSILCSAFPNQNQSQNPSSSLQAFSAALALSSILLSAPLPAVADIS 75

Query: 64  GLTPCKESKQFAKREKQQIKKLQSSLKNYAPDSAPALALKATVEKTKRRFAFYGNQGLLC 123
           GLTPCKESKQFAKREKQQIKKL+S+LKNYAPDSAPALA+KAT+EKTKRRFAFYG QGLLC
Sbjct: 76  GLTPCKESKQFAKREKQQIKKLESALKNYAPDSAPALAIKATIEKTKRRFAFYGKQGLLC 135

Query: 124 GADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIIDV 183
           GADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIR++KKPTQKEIIIDV
Sbjct: 136 GADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRNEKKPTQKEIIIDV 195

Query: 184 PLATGLVFRGFSWPVAAYRELVNGELIAKD 212
           PLAT LVFRGFSWPVAAYRELVNGELIAKD
Sbjct: 196 PLATSLVFRGFSWPVAAYRELVNGELIAKD 225

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BLAST of CmUC01G009020 vs. NCBI nr
Match: XP_022994929.1 (photosystem I reaction center subunit III, chloroplastic [Cucurbita maxima])

HSP 1 Score: 375.2 bits (962), Expect = 4.6e-100
Identity = 187/208 (89.90%), Postives = 197/208 (94.71%), Query Frame = 0


Query: 4   PKLSSPFPLKPKPSSSILCSATHNQDQNPSSSLQAFSAALALSSILLSAPLPAVADISGL 63
           PK SS    K +PSSSILCSAT NQ++  SSSLQAFSAALALSSILLSAPLPAVADI+GL
Sbjct: 16  PKFSSSLASKSRPSSSILCSATQNQNETASSSLQAFSAALALSSILLSAPLPAVADIAGL 75

Query: 64  TPCKESKQFAKREKQQIKKLQSSLKNYAPDSAPALALKATVEKTKRRFAFYGNQGLLCGA 123
           TPCK+SKQFAKREKQQIKKL+SSLKNYAPDSAPALA++A+VEKTKRRFAFYG QGLLCGA
Sbjct: 76  TPCKDSKQFAKREKQQIKKLESSLKNYAPDSAPALAIQASVEKTKRRFAFYGKQGLLCGA 135

Query: 124 DGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIIDVPL 183
           DGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIIDVPL
Sbjct: 136 DGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIIDVPL 195

Query: 184 ATGLVFRGFSWPVAAYRELVNGELIAKD 212
           AT LVFRGFSWP+AAYRELVNGELIAKD
Sbjct: 196 ATSLVFRGFSWPIAAYRELVNGELIAKD 223

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BLAST of CmUC01G009020 vs. NCBI nr
Match: XP_023542340.1 (photosystem I reaction center subunit III, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372.1 bits (954), Expect = 3.9e-99
Identity = 188/211 (89.10%), Postives = 198/211 (93.84%), Query Frame = 0


Query: 4   PKLSSPFPLKPKPSSSILCSATHNQD---QNPSSSLQAFSAALALSSILLSAPLPAVADI 63
           PK SS    K +PSSSILCSAT NQ+   +N SSSLQAFSAALALSSILLSAPLPAVADI
Sbjct: 16  PKFSSSLASKSRPSSSILCSATQNQNGSPENASSSLQAFSAALALSSILLSAPLPAVADI 75

Query: 64  SGLTPCKESKQFAKREKQQIKKLQSSLKNYAPDSAPALALKATVEKTKRRFAFYGNQGLL 123
           +GLTPCK+SKQFAKREKQQIKKL+SSLKNYAPDSAPALA++A+VEKTKRRFAFYG QGLL
Sbjct: 76  AGLTPCKDSKQFAKREKQQIKKLESSLKNYAPDSAPALAIQASVEKTKRRFAFYGKQGLL 135

Query: 124 CGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIID 183
           CGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIID
Sbjct: 136 CGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIID 195

Query: 184 VPLATGLVFRGFSWPVAAYRELVNGELIAKD 212
           VPLAT LVFRGFSWP+AAYRELVNGELIAKD
Sbjct: 196 VPLATSLVFRGFSWPIAAYRELVNGELIAKD 226

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BLAST of CmUC01G009020 vs. ExPASy Swiss-Prot
Match: P46486 (Photosystem I reaction center subunit III, chloroplastic OS=Flaveria trinervia OX=4227 GN=PSAF PE=2 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 1.8e-83
Identity = 164/209 (78.47%), Postives = 181/209 (86.60%), Query Frame = 0


Query: 7   SSPFPLKPK-PSSSILCSATHNQDQNPS---SSLQAFSAALALSSILLSA---PLPAVAD 66
           SSP   K K  S+SI+CS + ++  N +   SSL+A SAALALSSIL+S+    LPA AD
Sbjct: 20  SSPITSKSKVTSTSIVCSGSTDEKINNADGKSSLKALSAALALSSILVSSTVPALPASAD 79

Query: 67  ISGLTPCKESKQFAKREKQQIKKLQSSLKNYAPDSAPALALKATVEKTKRRFAFYGNQGL 126
           ISGLTPCKESKQFAKREKQ +KKL+SSLK YAPDSAPALA+KAT+EKTKRRF  YG QGL
Sbjct: 80  ISGLTPCKESKQFAKREKQSLKKLESSLKLYAPDSAPALAIKATMEKTKRRFDNYGKQGL 139

Query: 127 LCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIII 186
           LCG+DGLPHLIVSGDQRHWGEFITPG LFLYIAGWIGWVGRSYLIAIRD+KKPTQKEIII
Sbjct: 140 LCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIII 199

Query: 187 DVPLATGLVFRGFSWPVAAYRELVNGELI 209
           DVPLAT L+FRGFSWPVAAYRE +NGELI
Sbjct: 200 DVPLATKLLFRGFSWPVAAYREYLNGELI 228

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BLAST of CmUC01G009020 vs. ExPASy Swiss-Prot
Match: Q9SHE8 (Photosystem I reaction center subunit III, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAF PE=1 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 9.2e-83
Identity = 152/198 (76.77%), Postives = 171/198 (86.36%), Query Frame = 0


Query: 14  PKPSSSILCSATHNQDQNPSSSLQAFSAALALSSILLSAPLPAVADISGLTPCKESKQFA 73
           PK S+  +CS   +    P  S++AFSAA+ALSSILLSAP+PAVADISGLTPCK+SKQFA
Sbjct: 24  PKSSARFVCSDDKSSSSTP-QSMKAFSAAVALSSILLSAPMPAVADISGLTPCKDSKQFA 83

Query: 74  KREKQQIKKLQSSLKNYAPDSAPALALKATVEKTKRRFAFYGNQGLLCGADGLPHLIVSG 133
           KREKQQIKKL+SSLK YAP+SAPALAL A +EKTKRRF  YG  GLLCG+DGLPHLIV+G
Sbjct: 84  KREKQQIKKLESSLKLYAPESAPALALNAQIEKTKRRFDNYGKYGLLCGSDGLPHLIVNG 143

Query: 134 DQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIIDVPLATGLVFRGFS 193
           DQRHWGEFITPG LFLYIAGWIGWVGRSYLIAI  +KKP  KEIIIDVPLA+ ++FRGF 
Sbjct: 144 DQRHWGEFITPGILFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRIIFRGFI 203

Query: 194 WPVAAYRELVNGELIAKD 212
           WPVAAYRE +NG+LIAKD
Sbjct: 204 WPVAAYREFLNGDLIAKD 220

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BLAST of CmUC01G009020 vs. ExPASy Swiss-Prot
Match: P12355 (Photosystem I reaction center subunit III, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSAF PE=1 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 2.3e-78
Identity = 155/219 (70.78%), Postives = 173/219 (79.00%), Query Frame = 0


Query: 6   LSSPFPLKPK--------PSSSILCSATHNQDQNPSSSLQAF----SAALALSSILLS-- 65
           L  P   KPK        P S I+C   ++Q Q     L       +AALALSS+LLS  
Sbjct: 9   LYKPLATKPKHLSSSSFAPRSKIVCQQENDQQQPKKLELAKVGANAAAALALSSVLLSSW 68

Query: 66  --APLPAVADISGLTPCKESKQFAKREKQQIKKLQSSLKNYAPDSAPALALKATVEKTKR 125
             AP  A+ADI+GLTPCKESKQFAKREKQ +KKLQ+SLK YA DSAPALA+KAT+EKTK+
Sbjct: 69  SVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIKATMEKTKK 128

Query: 126 RFAFYGNQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDD 185
           RF  YG  GLLCG+DGLPHLIVSGDQRHWGEFITPG LFLYIAGWIGWVGRSYLIAIRD+
Sbjct: 129 RFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDE 188

Query: 186 KKPTQKEIIIDVPLATGLVFRGFSWPVAAYRELVNGELI 209
           KKPTQKEIIIDVPLA+ L+FRGFSWPVAAYREL+NGEL+
Sbjct: 189 KKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELV 227

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BLAST of CmUC01G009020 vs. ExPASy Swiss-Prot
Match: P13192 (Photosystem I reaction center subunit III, chloroplastic OS=Hordeum vulgare OX=4513 GN=PSAF PE=1 SV=2)

HSP 1 Score: 283.9 bits (725), Expect = 1.8e-75
Identity = 146/220 (66.36%), Postives = 171/220 (77.73%), Query Frame = 0


Query: 7   SSPFPLKPKPSS-----SILCSATHNQDQNP------SSSLQAFSAALALSSILLS---- 66
           S+ F  KP+ S      S+ CSA+   + N       S+S++ FSAALALSS+LLS    
Sbjct: 11  STAFAAKPRLSRPPARLSVSCSASSGDNNNSTATPSLSASIKTFSAALALSSVLLSSAAT 70

Query: 67  APLPAVADISGLTPCKESKQFAKREKQQIKKLQSSLKNYAPDSAPALALKATVEKTKRRF 126
           +P PA ADI+GLTPCKESK FAKREKQ +KKL SSLK YAPDSAPALA++AT++KTKRRF
Sbjct: 71  SPPPAAADIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRF 130

Query: 127 AFYGNQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDDKK 186
             YG  GLLCG+DGLPHLIVSGDQRHWGEFITPG LFLYIAGWIGWVGRSYLIA+  +KK
Sbjct: 131 ENYGKFGLLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKK 190

Query: 187 PTQKEIIIDVPLATGLVFRGFSWPVAAYRELVNGELIAKD 212
           P  +EIIIDV LA  ++ RGF WPVAAYREL+NG+L+  D
Sbjct: 191 PAMREIIIDVELAARIIPRGFIWPVAAYRELINGDLVVDD 230

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BLAST of CmUC01G009020 vs. ExPASy Swiss-Prot
Match: P12356 (Photosystem I reaction center subunit III, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=PSAF PE=1 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.3e-49
Identity = 104/216 (48.15%), Postives = 144/216 (66.67%), Query Frame = 0


Query: 1   MKWPKLSSPFPLKPKPSSSILCSATHNQDQNPSSSLQAFSAALALSSILLSAPLPAVADI 60
           M+ P + +   + P    ++  +    +++  S    A +A+   +++ LSAP  A+ADI
Sbjct: 5   MRNPAVKASSRVAPSSRRALRVACQAQKNETASKVGTALAASALAAAVSLSAPSAAMADI 64

Query: 61  SGLTPCKESKQFAKREKQQIKKLQSSLKNYAPDSAPALALKATVEKTKRRFAFYGNQGLL 120
           +GLTPC ESK +AK EK+++K L+  LK Y  DSAPA+ALKAT+E+TK RFA Y   GLL
Sbjct: 65  AGLTPCSESKAYAKLEKKELKTLEKRLKQYEADSAPAVALKATMERTKARFANYAKAGLL 124

Query: 121 CGADGLPHLI----VSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDDKKPTQKE 180
           CG DGLPHLI    ++    H GE   P F FLY+AG+IG+VGR YLIA++ + KPT KE
Sbjct: 125 CGNDGLPHLIADPGLALKYGHAGEVFIPTFGFLYVAGYIGYVGRQYLIAVKGEAKPTDKE 184

Query: 181 IIIDVPLATGLVFRGFSWPVAAYRELVNGELIAKDD 213
           IIIDVPLAT L ++G  WP+AA +EL  G L+ K++
Sbjct: 185 IIIDVPLATKLAWQGAGWPLAAVQELQRGTLLEKEE 220

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BLAST of CmUC01G009020 vs. ExPASy TrEMBL
Match: A0A0A0M3X2 (PSI-F OS=Cucumis sativus OX=3659 GN=Csa_1G714680 PE=3 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 5.2e-105
Identity = 195/208 (93.75%), Postives = 201/208 (96.63%), Query Frame = 0


Query: 4   PKLSSPFPLKPKPSSSILCSATHNQDQNPSSSLQAFSAALALSSILLSAPLPAVADISGL 63
           PK SSP  LKPKPSSSILCSA+ NQ+QN SSSLQAFSAALALSSILLSAPLPAVADISGL
Sbjct: 16  PKFSSPLALKPKPSSSILCSASQNQNQNTSSSLQAFSAALALSSILLSAPLPAVADISGL 75

Query: 64  TPCKESKQFAKREKQQIKKLQSSLKNYAPDSAPALALKATVEKTKRRFAFYGNQGLLCGA 123
           TPCKESKQFAKREKQQIKKL+SSLKNYAPDSAPALA+KAT+EKTKRRFAFYG QGLLCGA
Sbjct: 76  TPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTKRRFAFYGKQGLLCGA 135

Query: 124 DGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIIDVPL 183
           DGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD+KKPTQKEIIIDVPL
Sbjct: 136 DGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPL 195

Query: 184 ATGLVFRGFSWPVAAYRELVNGELIAKD 212
           AT LVFRGFSWPVAAYRELVNGELIAKD
Sbjct: 196 ATSLVFRGFSWPVAAYRELVNGELIAKD 223

[Close]

BLAST of CmUC01G009020 vs. ExPASy TrEMBL
Match: A0A5D3E1S6 (PSI-F OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold129G00570 PE=3 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 9.8e-104
Identity = 195/210 (92.86%), Postives = 201/210 (95.71%), Query Frame = 0


Query: 4   PKLSSPFPLKPKPSSSILCSA--THNQDQNPSSSLQAFSAALALSSILLSAPLPAVADIS 63
           PKLSSP  LKPKPSSSILCSA    NQ QNPSSSLQAFSAALALSSILLSAPLPAVADIS
Sbjct: 16  PKLSSPLALKPKPSSSILCSAFPNQNQSQNPSSSLQAFSAALALSSILLSAPLPAVADIS 75

Query: 64  GLTPCKESKQFAKREKQQIKKLQSSLKNYAPDSAPALALKATVEKTKRRFAFYGNQGLLC 123
           GLTPCKESKQFAKREKQQIKKL+S+LKNYAPDSAPALA+KAT+EKTKRRFAFYG QGLLC
Sbjct: 76  GLTPCKESKQFAKREKQQIKKLESALKNYAPDSAPALAIKATIEKTKRRFAFYGKQGLLC 135

Query: 124 GADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIIDV 183
           GADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIR++KKPTQKEIIIDV
Sbjct: 136 GADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRNEKKPTQKEIIIDV 195

Query: 184 PLATGLVFRGFSWPVAAYRELVNGELIAKD 212
           PLAT LVFRGFSWPVAAYRELVNGELIAKD
Sbjct: 196 PLATSLVFRGFSWPVAAYRELVNGELIAKD 225

[Close]

BLAST of CmUC01G009020 vs. ExPASy TrEMBL
Match: A0A1S3C8V6 (PSI-F OS=Cucumis melo OX=3656 GN=LOC103498296 PE=3 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 9.8e-104
Identity = 195/210 (92.86%), Postives = 201/210 (95.71%), Query Frame = 0


Query: 4   PKLSSPFPLKPKPSSSILCSA--THNQDQNPSSSLQAFSAALALSSILLSAPLPAVADIS 63
           PKLSSP  LKPKPSSSILCSA    NQ QNPSSSLQAFSAALALSSILLSAPLPAVADIS
Sbjct: 16  PKLSSPLALKPKPSSSILCSAFPNQNQSQNPSSSLQAFSAALALSSILLSAPLPAVADIS 75

Query: 64  GLTPCKESKQFAKREKQQIKKLQSSLKNYAPDSAPALALKATVEKTKRRFAFYGNQGLLC 123
           GLTPCKESKQFAKREKQQIKKL+S+LKNYAPDSAPALA+KAT+EKTKRRFAFYG QGLLC
Sbjct: 76  GLTPCKESKQFAKREKQQIKKLESALKNYAPDSAPALAIKATIEKTKRRFAFYGKQGLLC 135

Query: 124 GADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIIDV 183
           GADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIR++KKPTQKEIIIDV
Sbjct: 136 GADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRNEKKPTQKEIIIDV 195

Query: 184 PLATGLVFRGFSWPVAAYRELVNGELIAKD 212
           PLAT LVFRGFSWPVAAYRELVNGELIAKD
Sbjct: 196 PLATSLVFRGFSWPVAAYRELVNGELIAKD 225

[Close]

BLAST of CmUC01G009020 vs. ExPASy TrEMBL
Match: A0A6J1K487 (PSI-F OS=Cucurbita maxima OX=3661 GN=LOC111490506 PE=3 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 2.3e-100
Identity = 187/208 (89.90%), Postives = 197/208 (94.71%), Query Frame = 0


Query: 4   PKLSSPFPLKPKPSSSILCSATHNQDQNPSSSLQAFSAALALSSILLSAPLPAVADISGL 63
           PK SS    K +PSSSILCSAT NQ++  SSSLQAFSAALALSSILLSAPLPAVADI+GL
Sbjct: 16  PKFSSSLASKSRPSSSILCSATQNQNETASSSLQAFSAALALSSILLSAPLPAVADIAGL 75

Query: 64  TPCKESKQFAKREKQQIKKLQSSLKNYAPDSAPALALKATVEKTKRRFAFYGNQGLLCGA 123
           TPCK+SKQFAKREKQQIKKL+SSLKNYAPDSAPALA++A+VEKTKRRFAFYG QGLLCGA
Sbjct: 76  TPCKDSKQFAKREKQQIKKLESSLKNYAPDSAPALAIQASVEKTKRRFAFYGKQGLLCGA 135

Query: 124 DGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIIDVPL 183
           DGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIIDVPL
Sbjct: 136 DGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIIDVPL 195

Query: 184 ATGLVFRGFSWPVAAYRELVNGELIAKD 212
           AT LVFRGFSWP+AAYRELVNGELIAKD
Sbjct: 196 ATSLVFRGFSWPIAAYRELVNGELIAKD 223

[Close]

BLAST of CmUC01G009020 vs. ExPASy TrEMBL
Match: A0A6J1GT12 (PSI-F OS=Cucurbita moschata OX=3662 GN=LOC111457171 PE=3 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 4.2e-99
Identity = 187/211 (88.63%), Postives = 198/211 (93.84%), Query Frame = 0


Query: 4   PKLSSPFPLKPKPSSSILCSATHNQD---QNPSSSLQAFSAALALSSILLSAPLPAVADI 63
           PK SS    K +PSSSILCSAT NQ+   +N SSSLQAFSAALALSSILLSAPLPAVADI
Sbjct: 16  PKFSSSLASKSRPSSSILCSATQNQNGSPENASSSLQAFSAALALSSILLSAPLPAVADI 75

Query: 64  SGLTPCKESKQFAKREKQQIKKLQSSLKNYAPDSAPALALKATVEKTKRRFAFYGNQGLL 123
           +GLTPCK+SKQFAKREKQQIKKL+SSLKNYAPDSAPALA++A+VEKTKRRFAFYG QGLL
Sbjct: 76  AGLTPCKDSKQFAKREKQQIKKLESSLKNYAPDSAPALAIQASVEKTKRRFAFYGKQGLL 135

Query: 124 CGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIID 183
           CGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIID
Sbjct: 136 CGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIID 195

Query: 184 VPLATGLVFRGFSWPVAAYRELVNGELIAKD 212
           VPLAT LVFRGFSWP+AAYRELVNG+LIAKD
Sbjct: 196 VPLATSLVFRGFSWPIAAYRELVNGDLIAKD 226

[Close]

BLAST of CmUC01G009020 vs. TAIR 10
Match: AT1G31330.1 (photosystem I subunit F )

HSP 1 Score: 308.1 bits (788), Expect = 6.5e-84
Identity = 152/198 (76.77%), Postives = 171/198 (86.36%), Query Frame = 0


Query: 14  PKPSSSILCSATHNQDQNPSSSLQAFSAALALSSILLSAPLPAVADISGLTPCKESKQFA 73
           PK S+  +CS   +    P  S++AFSAA+ALSSILLSAP+PAVADISGLTPCK+SKQFA
Sbjct: 24  PKSSARFVCSDDKSSSSTP-QSMKAFSAAVALSSILLSAPMPAVADISGLTPCKDSKQFA 83

Query: 74  KREKQQIKKLQSSLKNYAPDSAPALALKATVEKTKRRFAFYGNQGLLCGADGLPHLIVSG 133
           KREKQQIKKL+SSLK YAP+SAPALAL A +EKTKRRF  YG  GLLCG+DGLPHLIV+G
Sbjct: 84  KREKQQIKKLESSLKLYAPESAPALALNAQIEKTKRRFDNYGKYGLLCGSDGLPHLIVNG 143

Query: 134 DQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIIDVPLATGLVFRGFS 193
           DQRHWGEFITPG LFLYIAGWIGWVGRSYLIAI  +KKP  KEIIIDVPLA+ ++FRGF 
Sbjct: 144 DQRHWGEFITPGILFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRIIFRGFI 203

Query: 194 WPVAAYRELVNGELIAKD 212
           WPVAAYRE +NG+LIAKD
Sbjct: 204 WPVAAYREFLNGDLIAKD 220

The following BLAST results are available for this feature:

BLAST of CmUC01G009020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895167.1	2.3e-107	96.15	photosystem I reaction center subunit III, chloroplastic [Benincasa hispida]	[more]
XP_004150631.1	1.1e-104	93.75	photosystem I reaction center subunit III, chloroplastic [Cucumis sativus] >KGN6...	[more]
XP_008459076.1	2.0e-103	92.86	PREDICTED: photosystem I reaction center subunit III, chloroplastic [Cucumis mel...	[more]
XP_022994929.1	4.6e-100	89.90	photosystem I reaction center subunit III, chloroplastic [Cucurbita maxima]	[more]
XP_023542340.1	3.9e-99	89.10	photosystem I reaction center subunit III, chloroplastic [Cucurbita pepo subsp. ...	[more]

BLAST of CmUC01G009020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46486	1.8e-83	78.47	Photosystem I reaction center subunit III, chloroplastic OS=Flaveria trinervia O...	[more]
Q9SHE8	9.2e-83	76.77	Photosystem I reaction center subunit III, chloroplastic OS=Arabidopsis thaliana...	[more]
P12355	2.3e-78	70.78	Photosystem I reaction center subunit III, chloroplastic OS=Spinacia oleracea OX...	[more]
P13192	1.8e-75	66.36	Photosystem I reaction center subunit III, chloroplastic OS=Hordeum vulgare OX=4...	[more]
P12356	2.3e-49	48.15	Photosystem I reaction center subunit III, chloroplastic OS=Chlamydomonas reinha...	[more]

BLAST of CmUC01G009020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M3X2	5.2e-105	93.75	PSI-F OS=Cucumis sativus OX=3659 GN=Csa_1G714680 PE=3 SV=1	[more]
A0A5D3E1S6	9.8e-104	92.86	PSI-F OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold129G00570 PE=3 SV=...	[more]
A0A1S3C8V6	9.8e-104	92.86	PSI-F OS=Cucumis melo OX=3656 GN=LOC103498296 PE=3 SV=1	[more]
A0A6J1K487	2.3e-100	89.90	PSI-F OS=Cucurbita maxima OX=3661 GN=LOC111490506 PE=3 SV=1	[more]
A0A6J1GT12	4.2e-99	88.63	PSI-F OS=Cucurbita moschata OX=3662 GN=LOC111457171 PE=3 SV=1	[more]

BLAST of CmUC01G009020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31330.1	6.5e-84	76.77	photosystem I subunit F	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036577	Photosystem I PsaF, reaction centre subunit III superfamily	GENE3D	1.10.8.110	Photosystem I PsaF, reaction centre subunit III	coord: 59..212 e-value: 1.4E-72 score: 244.3
IPR036577	Photosystem I PsaF, reaction centre subunit III superfamily	SUPERFAMILY	81536	Subunit III of photosystem I reaction centre, PsaF	coord: 59..212
IPR003666	Photosystem I PsaF, reaction centre subunit III	PFAM	PF02507	PSI_PsaF	coord: 46..211 e-value: 3.2E-80 score: 268.0
IPR003666	Photosystem I PsaF, reaction centre subunit III	PANTHER	PTHR34939	PHOTOSYSTEM I REACTION CENTER SUBUNIT III, CHLOROPLASTIC	coord: 13..212

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC01G009020.1	CmUC01G009020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009538	photosystem I reaction center
cellular_component	GO:0009522	photosystem I