CmUC01G008750 (gene) Watermelon (USVL531) v1

Overview
NameCmUC01G008750
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionGAST1 protein-like protein 5
LocationCmU531Chr01: 10177904 .. 10179692 (+)
RNA-Seq ExpressionCmUC01G008750
SyntenyCmUC01G008750
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAACAAGTTATTATTTATGACACACAAAATGGCACCCTCTCCTCCTTCCATTAGCACCTCCTTCTTCTTCTTCTTCATTCTCTTTTTTCTCACTAACTCTCTGCATTTCGCTGAGGTATGTTCTTATATATATGCTATTACTTTTAACCTTCTTTTATCTCCGTTTGTTTATTTGGAAATGTAGATCATTGTTATCTTTGAATGTTACTATATGTTTAGATAACTATGTTTGTTTTGTAAAAATATGCTTTCAAATAATTTAAAATACTTTGATAACTGTACTTGTTTTGTAGGATTTTTACCAGGGAAGGCCGTATTTCATAATGTTCTTATGACTATTCATTAATTTATAATTAATTTAATATAATTTGAAGGAAAATTATTATAAATGAAAAAAATATTAAACTATTTAAAAATATAGAAAAATTTTCAGTGATATCACCGTCTATCGCTGTAAAATTTTTATATATTTTTAAATATTTTGGCCCGTTAATTTTAATCTATACAAGATATTTGTTTTTATTAATTTAAATTTCTTTTAAAGTTAATATAGCAAAATAATTTATATTAATTTAAGATATTTTTATAAACTAAATATTAATTTATGTTTAAATTTGACTTGGAATATCTTTCTAAAAAAATATAAAAACAAACAGATATAACTAAGAAGAATGATAAAAAGGAAGGAAGGGTAAAAGGATATAAAAAAAAAAGTTATGCGCTCAATTGAGAAATCCATGTTTCGACTTTTAGGATGGCATCCAAAATCTTTTAAATGTCCCTCGTAAGGACATTTTATAAACGATGTGTGGGCATGTTACATTACTGCAAAACAAACGCGCAGTTACGCAGTAATCCAAATGCTCATTCCATAAGAATTTTAGATTTTACAAATGCAATCGGTCTTTAAGTTGTATATTTCTTGTCAATTAATTTTTCCCTTTTTTTTTTTTTTTTTAATTTTCATATAATGGGTTTCTTTATTTCTTCAACAGGCTGGTTCAAACTTTCGTCCTTCAGGTACTTATGATAATCAATTTTTTTTTCCTGTTGTTTAGCTACATTTAATGTTTCAAATGCATATGTTAATCAAAAGGAATAACCTTGAATGTTCATATATGATATTATTGTTGAATTTGGTTTTTTTTTTTTTTTTTTTTTTTTAATAAGACTGAGCACTTGAGATGCCTTTTGAAAGTATTACTTTTAAGTGAATCATTCTTTACAATGAATGTATCCATGGAAGAAATATAAGTTTGAATTGAGTTTTGCGGTTAGTATTATTGAGAAGTAGTCAAATTTATTAAGCCAAGCAATGTAAAAACGTGTAAAGGAGGATGTTCATTTGATGTTTTTAAAAGCCATGTCAAACTCACTCTAAGGCCTTGTGAGAACAGATTGCAGGCCGAGGTGCAATTATCGATGCTCAGCGACGTCGCACAGGAAGCCATGCATGTTCTTCTGCCAAAAATGTTGTGCAAAATGCCTGTGTGTGCCTCCAGGGACCTATGGCAACAAGCAAGTTTGTCCATGCTACAATAACTGGAAGACTCAGCAAGGAGGTCCCAAATGCCCTTGAGGAGAATATTACAGTTTTTTCCTACCTTCAGTTTTTGTTTCTCTTGGGAAATTTTCATTAAATATATTTACTCCCTGATTTTAGATTCCCCTTTTTCTTTCTTTTGTATTTTTTTCCTTATTATTATTAATTTTTTAATTTTCTTCCGTTATATATTTCAATTATTGATGGTCATACTAGTAATTTGGAAATATACCAAAAAAATATTTA

mRNA sequence

CAACAAGTTATTATTTATGACACACAAAATGGCACCCTCTCCTCCTTCCATTAGCACCTCCTTCTTCTTCTTCTTCATTCTCTTTTTTCTCACTAACTCTCTGCATTTCGCTGAGATTGCAGGCCGAGGTGCAATTATCGATGCTCAGCGACGTCGCACAGGAAGCCATGCATGTTCTTCTGCCAAAAATGTTGTGCAAAATGCCTGTGTGTGCCTCCAGGGACCTATGGCAACAAGCAAGTTTGTCCATGCTACAATAACTGGAAGACTCAGCAAGGAGGTCCCAAATGCCCTTGAGGAGAATATTACAGTTTTTTCCTACCTTCAGTTTTTGTTTCTCTTGGGAAATTTTCATTAAATATATTTACTCCCTGATTTTAGATTCCCCTTTTTCTTTCTTTTGTATTTTTTTCCTTATTATTATTAATTTTTTAATTTTCTTCCGTTATATATTTCAATTATTGATGGTCATACTAGTAATTTGGAAATATACCAAAAAAATATTTA

Coding sequence (CDS)

ATGACACACAAAATGGCACCCTCTCCTCCTTCCATTAGCACCTCCTTCTTCTTCTTCTTCATTCTCTTTTTTCTCACTAACTCTCTGCATTTCGCTGAGATTGCAGGCCGAGGTGCAATTATCGATGCTCAGCGACGTCGCACAGGAAGCCATGCATGTTCTTCTGCCAAAAATGTTGTGCAAAATGCCTGTGTGTGCCTCCAGGGACCTATGGCAACAAGCAAGTTTGTCCATGCTACAATAACTGGAAGACTCAGCAAGGAGGTCCCAAATGCCCTTGAGGAGAATATTACAGTTTTTTCCTACCTTCAGTTTTTGTTTCTCTTGGGAAATTTTCATTAA

Protein sequence

MTHKMAPSPPSISTSFFFFFILFFLTNSLHFAEIAGRGAIIDAQRRRTGSHACSSAKNVVQNACVCLQGPMATSKFVHATITGRLSKEVPNALEENITVFSYLQFLFLLGNFH
Homology
BLAST of CmUC01G008750 vs. NCBI nr
Match: KAE8648434.1 (hypothetical protein Csa_009215 [Cucumis sativus])

HSP 1 Score: 120.6 bits (301), Expect = 9.0e-24
Identity = 64/84 (76.19%), Postives = 71/84 (84.52%), Query Frame = 0

Query: 11 SISTSFFFFFILFFLT-NSLHFAEIAGRGAIIDAQRRRTGSHACSSAKNVVQNACVCLQG 70
          S + SFF F ILF LT ++LH AEIA R A+IDA+R+RTGSHACSSAKNVVQN CVCLQG
Sbjct: 4  SFTYSFFLFSILFLLTISNLHLAEIASRNAVIDARRQRTGSHACSSAKNVVQNVCVCLQG 63

Query: 71 PMATSKFVHATITGRLSKEVPNAL 94
           M TSK VHATITG+LSKEVPNAL
Sbjct: 64 HMETSKNVHATITGKLSKEVPNAL 87

BLAST of CmUC01G008750 vs. NCBI nr
Match: KAF7121314.1 (hypothetical protein RHSIM_Rhsim13G0216800 [Rhododendron simsii])

HSP 1 Score: 79.0 bits (193), Expect = 3.0e-11
Identity = 43/66 (65.15%), Postives = 49/66 (74.24%), Query Frame = 0

Query: 39  AIIDAQRRRTGSHACSSAKNVVQNACVCLQGPMATSKFVHATITGRLSKEVPNALEE-NI 98
           A + AQRRRT SHACSSA++VV NACVCL+ PM TS+F  ATITGR  +E PNALE  N 
Sbjct: 75  ARVGAQRRRTRSHACSSARSVVLNACVCLREPMETSRFALATITGRPREEDPNALESGNT 134

Query: 99  TVFSYL 104
           T   YL
Sbjct: 135 TTPGYL 140

BLAST of CmUC01G008750 vs. NCBI nr
Match: KAF1877828.1 (hypothetical protein Lal_00038137 [Lupinus albus])

HSP 1 Score: 71.6 bits (174), Expect = 4.8e-09
Identity = 48/100 (48.00%), Postives = 58/100 (58.00%), Query Frame = 0

Query: 1   MTHKMAPSPPSISTSFFFFFILFFLT-NSLHFAEIAGRGAII-----DAQRRRTGSHACS 60
           +T   AP+P   S+     F ++ +T  SL    I     ++     DAQ   T SH CS
Sbjct: 29  VTSNEAPAPSPQSSINGTHFPMYGITEGSLQPQGIEDENNVVHVAQRDAQTHSTRSHVCS 88

Query: 61  SAKNVVQNACVCLQGPMATSKFVHATITGRLSKEVPNALE 95
            AK+VV NACVCL   MATSK VHATITGRL +EVPNA E
Sbjct: 89  FAKSVVPNACVCLLELMATSKSVHATITGRLKREVPNAPE 128

BLAST of CmUC01G008750 vs. NCBI nr
Match: GAY42225.1 (hypothetical protein CUMW_065150 [Citrus unshiu])

HSP 1 Score: 68.9 bits (167), Expect = 3.1e-08
Identity = 39/65 (60.00%), Postives = 46/65 (70.77%), Query Frame = 0

Query: 37  RGAIIDAQRRRTGSHACSSAKNVVQNACVCLQGPMATSKFVHATITGRLSKEVPNALEEN 96
           + AIIDAQ+  T S AC SAKNVVQ+A VC Q  M TSK   ATITGR S+E  NALE  
Sbjct: 46  QNAIIDAQQLHTRSRACFSAKNVVQSAYVCRQAHMGTSKRALATITGRQSEEDQNALELM 105

Query: 97  ITVFS 102
           ++V+S
Sbjct: 106 VSVYS 110

BLAST of CmUC01G008750 vs. NCBI nr
Match: KAF7146350.1 (hypothetical protein RHSIM_Rhsim04G0108900 [Rhododendron simsii])

HSP 1 Score: 66.6 bits (161), Expect = 1.5e-07
Identity = 38/70 (54.29%), Postives = 44/70 (62.86%), Query Frame = 0

Query: 35  AGRGAIIDAQRRRTGSHACSSAKNVVQNACVCLQGPMATSKFVHATITGRLSKEVPNALE 94
           AG  A  DA++RRT S ACSSAKN    AC   Q P ATS F  ATITGR  +E PNALE
Sbjct: 549 AGHNARRDARKRRTRSRACSSAKNAAPCACAYPQEPTATSSFALATITGRPREEDPNALE 608

Query: 95  ENITVFSYLQ 105
               +F+ L+
Sbjct: 609 LPFILFNILK 618

BLAST of CmUC01G008750 vs. ExPASy TrEMBL
Match: A0A6A5N0E8 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00038137 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.3e-09
Identity = 48/100 (48.00%), Postives = 58/100 (58.00%), Query Frame = 0

Query: 1   MTHKMAPSPPSISTSFFFFFILFFLT-NSLHFAEIAGRGAII-----DAQRRRTGSHACS 60
           +T   AP+P   S+     F ++ +T  SL    I     ++     DAQ   T SH CS
Sbjct: 29  VTSNEAPAPSPQSSINGTHFPMYGITEGSLQPQGIEDENNVVHVAQRDAQTHSTRSHVCS 88

Query: 61  SAKNVVQNACVCLQGPMATSKFVHATITGRLSKEVPNALE 95
            AK+VV NACVCL   MATSK VHATITGRL +EVPNA E
Sbjct: 89  FAKSVVPNACVCLLELMATSKSVHATITGRLKREVPNAPE 128

BLAST of CmUC01G008750 vs. ExPASy TrEMBL
Match: A0A2H5NRA8 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_065150 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.5e-08
Identity = 39/65 (60.00%), Postives = 46/65 (70.77%), Query Frame = 0

Query: 37  RGAIIDAQRRRTGSHACSSAKNVVQNACVCLQGPMATSKFVHATITGRLSKEVPNALEEN 96
           + AIIDAQ+  T S AC SAKNVVQ+A VC Q  M TSK   ATITGR S+E  NALE  
Sbjct: 46  QNAIIDAQQLHTRSRACFSAKNVVQSAYVCRQAHMGTSKRALATITGRQSEEDQNALELM 105

Query: 97  ITVFS 102
           ++V+S
Sbjct: 106 VSVYS 110

BLAST of CmUC01G008750 vs. ExPASy TrEMBL
Match: A0A6N2K5W8 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS12695 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 9.8e-08
Identity = 36/63 (57.14%), Postives = 44/63 (69.84%), Query Frame = 0

Query: 39  AIIDAQRRRTGSHACSSAKNVVQNACVCLQGPMATSKFVHATITGRLSKEVPNALEENIT 98
           A+IDA R+ + SHACSSAK+ VQ+ACVC Q  M TS  V AT  GR  +EVP+ALE+   
Sbjct: 37  ALIDAPRQPSRSHACSSAKSAVQSACVCPQELMETSNLVPATTIGRPREEVPSALEDPAH 96

Query: 99  VFS 102
            FS
Sbjct: 97  DFS 99

BLAST of CmUC01G008750 vs. ExPASy TrEMBL
Match: A0A5A7USS3 (GAST1 protein-like protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold257G00480 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.3e-07
Identity = 33/53 (62.26%), Postives = 39/53 (73.58%), Query Frame = 0

Query: 42 DAQRRRTGSHACSSAKNVVQNACVCLQGPMATSKFVHATITGRLSKEVPNALE 95
          D QR+ + SHACS  K+VV NACV L G MAT+K V ATI GRL +E PNAL+
Sbjct: 20 DVQRQHSRSHACSFVKSVVPNACVFLMGLMATNKLVLATINGRLREEAPNALD 72

BLAST of CmUC01G008750 vs. ExPASy TrEMBL
Match: A0A2G9HIR2 (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_09933 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.2e-07
Identity = 34/56 (60.71%), Postives = 38/56 (67.86%), Query Frame = 0

Query: 39 AIIDAQRRRTGSHACSSAKNVVQNACVCLQGPMATSKFVHATITGRLSKEVPNALE 95
          A+ DAQR  T S ACSSA+N VQ+ C CLQ   ATSKF  ATITGR  +   NALE
Sbjct: 31 ALTDAQRPHTRSRACSSARNAVQSVCACLQAHTATSKFAPATITGRPREADQNALE 86

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8648434.19.0e-2476.19hypothetical protein Csa_009215 [Cucumis sativus][more]
KAF7121314.13.0e-1165.15hypothetical protein RHSIM_Rhsim13G0216800 [Rhododendron simsii][more]
KAF1877828.14.8e-0948.00hypothetical protein Lal_00038137 [Lupinus albus][more]
GAY42225.13.1e-0860.00hypothetical protein CUMW_065150 [Citrus unshiu][more]
KAF7146350.11.5e-0754.29hypothetical protein RHSIM_Rhsim04G0108900 [Rhododendron simsii][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6A5N0E82.3e-0948.00Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00038137 PE=4 SV=1[more]
A0A2H5NRA81.5e-0860.00Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_065150 PE=4 SV=1[more]
A0A6N2K5W89.8e-0857.14Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS12695 PE=4 SV=1[more]
A0A5A7USS31.3e-0762.26GAST1 protein-like protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A2G9HIR22.2e-0760.71Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_09933 P... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC01G008750.1CmUC01G008750.1mRNA