CmUC01G007470 (gene) Watermelon (USVL531) v1

BLAST of CmUC01G007470 vs. NCBI nr
Match: XP_038874337.1 (DNA-directed RNA polymerase V subunit 1 [Benincasa hispida])

HSP 1 Score: 3605.8 bits (9349), Expect = 0.0e+00
Identity = 1808/1960 (92.24%), Postives = 1850/1960 (94.39%), Query Frame = 0

Query: 130  CIAAISDCPITHASQLSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHI 189
            CIAAISDCPITHASQLSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHI
Sbjct: 29   CIAAISDCPITHASQLSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHI 88

Query: 190  TELKKMLSLLCLKCLKMKKTKFPSKNIGFAERLLSSCCEDASQVSIREAKKPDGASYLQL 249
            TELKKMLSLLCLKCLKMKKTKFPSKNIGFAERLLS+CCEDASQVSIREAKK DGASYLQL
Sbjct: 89   TELKKMLSLLCLKCLKMKKTKFPSKNIGFAERLLSACCEDASQVSIREAKKADGASYLQL 148

Query: 250  KVPSRSSLREGFWDFLERYGFRYGDNLTRTLLPCEVKEMLKKIPNETRKKLAGRGYYPQD 309
            KVPSR+SLREGFWDFLERYGFRYGDNLTRTLLPCEVKEMLKKIPNETRKKLAGRGY PQD
Sbjct: 149  KVPSRTSLREGFWDFLERYGFRYGDNLTRTLLPCEVKEMLKKIPNETRKKLAGRGYCPQD 208

Query: 310  GYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEIIKGSRSGAPNFESHEV 369
            GYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEII+GSRSGAPNFESHEV
Sbjct: 209  GYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEIIRGSRSGAPNFESHEV 268

Query: 370  EANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKAWLEKMRTLFIRKGSGFSS 429
            EANDLQLAVDQYLQVRGTVKASRGIDAR+GVNKELNDPSTKAWLEKMRTLFIRKGSGFSS
Sbjct: 269  EANDLQLAVDQYLQVRGTVKASRGIDARYGVNKELNDPSTKAWLEKMRTLFIRKGSGFSS 328

Query: 430  RSVITGDAYKLVSEIGVPFEVAQRITFEERVSVHNIKYLQELVDKKLCLTYRDGSSAYSL 489
            RSVITGDAYKLV+EIGVPFEVAQRITFEERVSVHNIKYLQELVDKKLCLTYRDGSSAYSL
Sbjct: 329  RSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIKYLQELVDKKLCLTYRDGSSAYSL 388

Query: 490  REGSTGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHTVKINPLICG 549
            REGS GHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHTVKINPLICG
Sbjct: 389  REGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHTVKINPLICG 448

Query: 550  PLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFR 609
            PLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFR
Sbjct: 449  PLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFR 508

Query: 610  KYFLGKAAAQQLAMFVSSYLPPPALLGVHSESLHWTALQILQTVLPACFDCHGDSYLIKN 669
            KYFL KAAAQQLAMFVSSYLPPPALLGV S SLHWTALQILQTVLPACFDCHGDSYLIKN
Sbjct: 509  KYFLDKAAAQQLAMFVSSYLPPPALLGVRSGSLHWTALQILQTVLPACFDCHGDSYLIKN 568

Query: 670  SDFLKFDFERDAMPSLVNEILTSIFFQKGPEEVLRFFDSLQPLLMEHIFSEGFSVGLDDY 729
            SDFLKFDF+RDAMPSL+NEILTSIFFQKGPEEVLRFFDSLQPLLMEHIFSEGFSVGLDDY
Sbjct: 569  SDFLKFDFDRDAMPSLINEILTSIFFQKGPEEVLRFFDSLQPLLMEHIFSEGFSVGLDDY 628

Query: 730  SMPMAFLQALQKNIQVISPLLYQLRSTFNELVELQLENHIRSVKVPFTNFILKLSSLGKL 789
            SMPMAFLQALQKNIQVISPLLYQLRSTFNELVELQLENHIR+VKVPFTNFILKLSSLGKL
Sbjct: 629  SMPMAFLQALQKNIQVISPLLYQLRSTFNELVELQLENHIRAVKVPFTNFILKLSSLGKL 688

Query: 790  FDSKSDSAINKVVQQIGFLGLQLSDKGKFYSKTLIEDVASLFHNRYSSDKIDYPSAEFGL 849
            FDSKSDSA+NKVVQQIGFLGLQLSDKGKFYSKTLIEDVASLFHNRYSSDKIDYPSAEFGL
Sbjct: 689  FDSKSDSAVNKVVQQIGFLGLQLSDKGKFYSKTLIEDVASLFHNRYSSDKIDYPSAEFGL 748

Query: 850  VKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNV 909
            VKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNV
Sbjct: 749  VKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNV 808

Query: 910  CSNSIIQLEYGIKAGMMQPYSLFPPGEPVGVLAATAMSNPAYKAVLDSTPSSNSSWDMMK 969
            CSNSIIQLEYG+KAGMM+PYSLFPPGEPVGVLAATAMSNPAYKAVLDSTPSSNSSWDMMK
Sbjct: 809  CSNSIIQLEYGMKAGMMKPYSLFPPGEPVGVLAATAMSNPAYKAVLDSTPSSNSSWDMMK 868

Query: 970  EILLCKVSFKNEPIDRRVILYLNNCDCGRKYCNENAAYVVKSHLKKVTLKDAAVDFMIEY 1029
            EILLCKVSFKNEPIDRRVILYLNNC CGRKYCNENAAYVVKSHLKKVTLKDAAVDFMIEY
Sbjct: 869  EILLCKVSFKNEPIDRRVILYLNNCACGRKYCNENAAYVVKSHLKKVTLKDAAVDFMIEY 928

Query: 1030 NRQPTPSGLGPGLVGHVHLNKMLLKELKISMTEVLRRCQETISSFKKKKKKIAHALRFSI 1089
            NRQPTPSGLGPGLVGHVHLNKMLLKELKI MTEVLRRCQETISSF+KKKKKIAHALRFSI
Sbjct: 929  NRQPTPSGLGPGLVGHVHLNKMLLKELKIDMTEVLRRCQETISSFRKKKKKIAHALRFSI 988

Query: 1090 SEHCSFHQWNGEESTDMPC----------------------------------DPRISSA 1149
            SE CSFHQWNGEESTDMPC                                  DPRISSA
Sbjct: 989  SEQCSFHQWNGEESTDMPCLIFWHETRDVHLERTAHILADVVFPLLSETIIKGDPRISSA 1048

Query: 1150 NVIWISPDSTSWQKNPSRWQDGELALDVCLEKSAVKQNGDAWRNVLDCCLPVMHLIDTSR 1209
            NVIWISPDSTSWQKNPSRWQDGELALDVCLEKSAVKQNGDAWRNVLDCCLPV+HLIDT R
Sbjct: 1049 NVIWISPDSTSWQKNPSRWQDGELALDVCLEKSAVKQNGDAWRNVLDCCLPVIHLIDTRR 1108

Query: 1210 SVPYAIKQVQELLGISCAFDQMIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNS 1269
            SVPYAIKQVQ+LLGISCAFDQMIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNS
Sbjct: 1109 SVPYAIKQVQDLLGISCAFDQMIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNS 1168

Query: 1270 SGYKALSRALSIQVPFTEATLFTPRKCFERAAEKCHKDSLSSIVASCSWGKHVAVGTGSR 1329
             GYKALSRAL+IQVPFTEATLFTPRKCFERAAEKCHKDSLSSIVASCSWGKHVAVGTGSR
Sbjct: 1169 GGYKALSRALNIQVPFTEATLFTPRKCFERAAEKCHKDSLSSIVASCSWGKHVAVGTGSR 1228

Query: 1330 FDILWDQKELGCKQDEVVDVYNFLHMVRSGKSEESTSACLGEEIEDIMVEDEYGELALSP 1389
            FDILWDQKELGCKQD+VVDVYNFLHMVRS KSEE TSACLGEEIEDIMVEDEYGEL LSP
Sbjct: 1229 FDILWDQKELGCKQDDVVDVYNFLHMVRSSKSEEPTSACLGEEIEDIMVEDEYGELTLSP 1288

Query: 1390 EPFSTSEKPVFEDSAEFEHCLDNYPGESKWEKAPSLGAVSTGGGQWENNENGKATNSSDD 1449
            EP  TSEKPVFEDSAEFEHCLDNYPGESKWEKAPSLGAVSTGGGQWENNENGKATNSSDD
Sbjct: 1289 EPL-TSEKPVFEDSAEFEHCLDNYPGESKWEKAPSLGAVSTGGGQWENNENGKATNSSDD 1348

Query: 1450 NDWSGWGRKAEPDAAITNAPENISNSGWDTTPSWGNKATKTSNNNDWSNVGTKEVERDSI 1509
            NDWSGWGRKAEPD A TNA EN SNS WDTTPSWGNKAT TSN+NDWSN GTKEVERDS 
Sbjct: 1349 NDWSGWGRKAEPDVANTNAQENTSNSAWDTTPSWGNKATNTSNDNDWSNSGTKEVERDSF 1408

Query: 1510 TSMENTPKSGGWDTASTWGTKTKDVDSFKGETAPEKSNSWSGLQNDKTETQDAFHKKVEM 1569
            TSME TPKSGGWDTASTWGTKTKDVD FKG+TAPEKSN WSGLQN+K ETQDAFHKKVEM
Sbjct: 1409 TSMEKTPKSGGWDTASTWGTKTKDVDGFKGDTAPEKSNLWSGLQNEKAETQDAFHKKVEM 1468

Query: 1570 ASKSSGWEDKAWSRETSKTEDSWSSQVKDKAESFQVQVQEVSTKTNGWGSAEGWSKNSGD 1629
             SKS GWEDKAWSR +SKTED+WSSQVKDKAESFQVQVQEVS+KTNGWGSA  W KNSGD
Sbjct: 1469 TSKSRGWEDKAWSRGSSKTEDNWSSQVKDKAESFQVQVQEVSSKTNGWGSAGSWRKNSGD 1528

Query: 1630 DHQSVAGWNDGQASMDREKVSDRWDSRATQRMESQRTSSWGSPTVCDSKDSFSSKAMEHS 1689
            DHQS AGWNDGQASMD +KVSDRWDSRAT RMESQRTSSWGS TVCDSKDSF SKA+EHS
Sbjct: 1529 DHQSEAGWNDGQASMDLDKVSDRWDSRATDRMESQRTSSWGSQTVCDSKDSFPSKAVEHS 1588

Query: 1690 DSIALNHSWDQQKSPEASQGFSNDVWGQQKSREVIKPSHVNNESNRHGWSSQIESHEGSG 1749
            D++ LNHSWDQ KSPEASQGF NDVWGQQKSREVIKPSHVNNESN+ GW SQIES+EGSG
Sbjct: 1589 DAV-LNHSWDQHKSPEASQGFGNDVWGQQKSREVIKPSHVNNESNQRGWGSQIESNEGSG 1648

Query: 1750 HGFDQVTSEHKSSDTGGWDSQEKMDKPWDK----------------------QKSTQASE 1809
            HGFDQVTSEHKSSDTGGWDSQEKMDKPWDK                      QKST+AS+
Sbjct: 1649 HGFDQVTSEHKSSDTGGWDSQEKMDKPWDKQKSTEASQSWGSQEKMDKPWDTQKSTEASQ 1708

Query: 1810 SWGSQNDTQSSWGQPKKAPEEFSWGSQDDSNTQFSQLKPPETSLGWEQQKSPDVSHGWAS 1869
            SWGSQND+  SWGQP++A EEFS GSQDDSNTQFSQLKPPETSLGWE QKSP+VSHGW S
Sbjct: 1709 SWGSQNDSLGSWGQPQRAAEEFSRGSQDDSNTQFSQLKPPETSLGWE-QKSPEVSHGWGS 1768

Query: 1870 HKESSEQTSSQGWDNKKNQGSKGWGGNAGEWKNRKNRPPKSPGILNDDANVRGIYTASGQ 1929
            HKESSEQTSS GWD KKNQGSKGWGGNAGEWKNRKNRPPKSPG+LNDD+N+R I+TASGQ
Sbjct: 1769 HKESSEQTSSHGWD-KKNQGSKGWGGNAGEWKNRKNRPPKSPGVLNDDSNLRAIFTASGQ 1828

Query: 1930 RLDMFTTEEQDILADIEPIMQSIRKVMHQSGYNDGDPLSAEDQSFVLESVFNFHPDKAAK 1989
            RLDMFTTEEQDILADIEPIMQSIRKVMHQSGYNDGDPLSAEDQSFVL+SVFNFHPDKAAK
Sbjct: 1829 RLDMFTTEEQDILADIEPIMQSIRKVMHQSGYNDGDPLSAEDQSFVLQSVFNFHPDKAAK 1888

Query: 1990 MGAGIDHFMVSRHSSFQESRCFYVVTTDGHKEDFSYRKCLDNFIKGKYPDMAEMFVAKYF 2034
            MGAGIDHFMVSRHSSFQESRCFYVVTTDGHKEDFSYRKCLDNFIKGKYPD+AEMFVAKYF
Sbjct: 1889 MGAGIDHFMVSRHSSFQESRCFYVVTTDGHKEDFSYRKCLDNFIKGKYPDLAEMFVAKYF 1948

BLAST of CmUC01G007470 vs. NCBI nr
Match: XP_008465860.1 (PREDICTED: DNA-directed RNA polymerase V subunit 1 [Cucumis melo])

HSP 1 Score: 3550.4 bits (9205), Expect = 0.0e+00
Identity = 1767/1939 (91.13%), Postives = 1831/1939 (94.43%), Query Frame = 0

Query: 130  CIAAISDCPITHASQLSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHI 189
            CIAAISDCPITHASQLSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHI
Sbjct: 29   CIAAISDCPITHASQLSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHI 88

Query: 190  TELKKMLSLLCLKCLKMKKTKFPSKNIGFAERLLSSCCEDASQVSIREAKKPDGASYLQL 249
            TEL+KMLSLLCLKCLKMKKTKFPSKNIGFAERLLSSCCEDASQV+IREAKK DGASYLQL
Sbjct: 89   TELRKMLSLLCLKCLKMKKTKFPSKNIGFAERLLSSCCEDASQVTIREAKKADGASYLQL 148

Query: 250  KVPSRSSLREGFWDFLERYGFRYGDNLTRTLLPCEVKEMLKKIPNETRKKLAGRGYYPQD 309
            KVPSR+SL+E FWDFLERYGFRYGDN TRTLLPCEVKEMLKKIPNETRKKLAGRGYYPQD
Sbjct: 149  KVPSRTSLQERFWDFLERYGFRYGDNFTRTLLPCEVKEMLKKIPNETRKKLAGRGYYPQD 208

Query: 310  GYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEIIKGSRSGAPNFESHEV 369
            GYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEIIKGSRSGAPNFESHEV
Sbjct: 209  GYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEIIKGSRSGAPNFESHEV 268

Query: 370  EANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKAWLEKMRTLFIRKGSGFSS 429
            EANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKAWLEKMRTLFIRKGSGFSS
Sbjct: 269  EANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKAWLEKMRTLFIRKGSGFSS 328

Query: 430  RSVITGDAYKLVSEIGVPFEVAQRITFEERVSVHNIKYLQELVDKKLCLTYRDGSSAYSL 489
            RSVITGDAYKLV+EIGVPFEVAQRITFEERVSVHNI+YLQELVDKKLCLTYRDGSSAYSL
Sbjct: 329  RSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRYLQELVDKKLCLTYRDGSSAYSL 388

Query: 490  REGSTGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHTVKINPLICG 549
            REGS GHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDH VKINPLICG
Sbjct: 389  REGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHVVKINPLICG 448

Query: 550  PLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFR 609
             LSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFR
Sbjct: 449  SLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFR 508

Query: 610  KYFLGKAAAQQLAMFVSSYLPPPALLGVHSESLHWTALQILQTVLPACFDCHGDSYLIKN 669
            KYFLGKAAAQQLAMFVSSYLPPPALLGV S SLHWTALQILQTVLPACFDCHGDSYLIKN
Sbjct: 509  KYFLGKAAAQQLAMFVSSYLPPPALLGVRSGSLHWTALQILQTVLPACFDCHGDSYLIKN 568

Query: 670  SDFLKFDFERDAMPSLVNEILTSIFFQKGPEEVLRFFDSLQPLLMEHIFSEGFSVGLDDY 729
            S+FLKFDF++DAMPSL+NEILTSIFFQKGPEEVL+FFDSLQPLLMEHIFSEGFSVGLDDY
Sbjct: 569  SNFLKFDFDKDAMPSLINEILTSIFFQKGPEEVLKFFDSLQPLLMEHIFSEGFSVGLDDY 628

Query: 730  SMPMAFLQALQKNIQVISPLLYQLRSTFNELVELQLENHIRSVKVPFTNFILKLSSLGKL 789
            SMPMAFLQALQKNIQV+SPLLYQLRSTFNELVELQLENH+RSVKVPFTNFILKLSSLGKL
Sbjct: 629  SMPMAFLQALQKNIQVLSPLLYQLRSTFNELVELQLENHLRSVKVPFTNFILKLSSLGKL 688

Query: 790  FDSKSDSAINKVVQQIGFLGLQLSDKGKFYSKTLIEDVASLFHNRYSSDKIDYPSAEFGL 849
            FDSKS+SAINKVVQQIGFLGLQLSDKG+FYSK+LIEDVASLFHNRYSSDKIDYPSAEFGL
Sbjct: 689  FDSKSESAINKVVQQIGFLGLQLSDKGRFYSKSLIEDVASLFHNRYSSDKIDYPSAEFGL 748

Query: 850  VKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNV 909
            VKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNV
Sbjct: 749  VKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNV 808

Query: 910  CSNSIIQLEYGIKAGMMQPYSLFPPGEPVGVLAATAMSNPAYKAVLDSTPSSNSSWDMMK 969
            CSNSIIQLEYG+KAGMMQPYSLFPPGEPVGVLAATAMS PAYKAVLDSTPSSNSSWDMMK
Sbjct: 809  CSNSIIQLEYGMKAGMMQPYSLFPPGEPVGVLAATAMSTPAYKAVLDSTPSSNSSWDMMK 868

Query: 970  EILLCKVSFKNEPIDRRVILYLNNCDCGRKYCNENAAYVVKSHLKKVTLKDAAVDFMIEY 1029
            EILLCKVSFKNEPIDRRVILYLNNC CGRKYCNENAAYVVKSHLKKVTLKD AVDFMIEY
Sbjct: 869  EILLCKVSFKNEPIDRRVILYLNNCACGRKYCNENAAYVVKSHLKKVTLKDVAVDFMIEY 928

Query: 1030 NRQPTPSGLGPGLVGHVHLNKMLLKELKISMTEVLRRCQETISSFKKKKKKIAHALRFSI 1089
            NRQPTPSGLGPGLVGHVHLN+MLLKEL I+MTEVLRRCQET+SSFKKKKKK+AHALRF+I
Sbjct: 929  NRQPTPSGLGPGLVGHVHLNRMLLKELNINMTEVLRRCQETMSSFKKKKKKVAHALRFAI 988

Query: 1090 SEHCSFHQWNGEESTDMPC----------------------------------DPRISSA 1149
            SEHC+FHQWNG ES DMPC                                  DPRI SA
Sbjct: 989  SEHCAFHQWNGVESIDMPCLIFWHETRDVHLERTAHILADIVFPLLSETIIKGDPRIKSA 1048

Query: 1150 NVIWISPDSTSWQKNPSRWQDGELALDVCLEKSAVKQNGDAWRNVLDCCLPVMHLIDTSR 1209
            +VIWISPDSTSWQKNPSRWQDGELALDVCLEKSA+KQNGDAWRNVLDCCLPV+HLIDT R
Sbjct: 1049 SVIWISPDSTSWQKNPSRWQDGELALDVCLEKSALKQNGDAWRNVLDCCLPVLHLIDTRR 1108

Query: 1210 SVPYAIKQVQELLGISCAFDQMIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNS 1269
            SVPYAIKQVQELLGISCAFDQMIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNS
Sbjct: 1109 SVPYAIKQVQELLGISCAFDQMIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNS 1168

Query: 1270 SGYKALSRALSIQVPFTEATLFTPRKCFERAAEKCHKDSLSSIVASCSWGKHVAVGTGSR 1329
             GYKALSRAL+IQVPFTEATLFTPRKCFE+AAEKCHKDSLSSIVASCSWGKHVAVGTGSR
Sbjct: 1169 GGYKALSRALNIQVPFTEATLFTPRKCFEKAAEKCHKDSLSSIVASCSWGKHVAVGTGSR 1228

Query: 1330 FDILWDQKELGCKQDEVVDVYNFLHMVRSGKSEESTSACLGEEIEDIMVEDEYGELALSP 1389
            FDILWDQKELGCKQD+VVDVYNFLHMVRSGKSEE TSACLGEE+EDIMVEDEYGEL LSP
Sbjct: 1229 FDILWDQKELGCKQDDVVDVYNFLHMVRSGKSEEPTSACLGEEVEDIMVEDEYGELTLSP 1288

Query: 1390 EPFSTSEKPVFEDSAEFEHCLDNYPGESKWEKAPSLGAVSTGGGQWENNENGKATNSSDD 1449
            EPFSTSEKPVFEDSAEFEHCLDN PGESKWEKAPSLGAVSTGGGQWE+N NGKAT SSDD
Sbjct: 1289 EPFSTSEKPVFEDSAEFEHCLDNDPGESKWEKAPSLGAVSTGGGQWESNGNGKATKSSDD 1348

Query: 1450 NDWSGWGRKAEPDAAITNAPENISNSGWDTTPSWGNKATKTSNNNDWSNVGTKEVERDSI 1509
            NDWSGWGRKAEPD  +TNA EN SNS WDTT SWGNKAT TSN+NDWSN  TKEVERDS 
Sbjct: 1349 NDWSGWGRKAEPDVTVTNAQENTSNSAWDTTSSWGNKATITSNDNDWSNCSTKEVERDSF 1408

Query: 1510 TSMENTPKSGGWDTASTWGTKTKDVDSFKGETAPEKSNSWSGLQNDKTETQDAFHKKVEM 1569
            TSME TPKSGGWDTASTWGTKTKD DSF GETAPEKSN WS LQ DK ETQDAFHKK EM
Sbjct: 1409 TSMEKTPKSGGWDTASTWGTKTKD-DSFNGETAPEKSNQWSSLQKDKAETQDAFHKKAEM 1468

Query: 1570 ASKSSGWEDKAWSRETSKTEDSWSSQVKDKAESFQVQVQEVSTKTNGWGSAEGWSKNSGD 1629
            ASKSSGWEDKAWSR TSKTED+WS QVKDKAESFQV VQ+VS+KTNGWGS  GW+KNSG 
Sbjct: 1469 ASKSSGWEDKAWSRGTSKTEDNWSGQVKDKAESFQVPVQKVSSKTNGWGSTGGWTKNSGG 1528

Query: 1630 DHQSVAGWNDGQASMDREKVSDRWDSRATQRMESQRTSSWGSPTVCDSKDSFSSKAMEHS 1689
            DHQ+ AGWNDGQASMDRE+ SDRWD +ATQ++ES +TSSWGSPTVCDSKDSF SKA++H 
Sbjct: 1529 DHQAEAGWNDGQASMDREEASDRWDRKATQKLESHQTSSWGSPTVCDSKDSFPSKAVDHG 1588

Query: 1690 DSIALNHSWDQQKSPEASQGFSNDVWGQQKSREVIKPSHVNNESNRHGWSSQIESHEGSG 1749
            DS+ +NHSWD+QKSPEASQGF ND W QQKS++VIKPSH NNESNR GW SQIES+EGS 
Sbjct: 1589 DSV-VNHSWDRQKSPEASQGFGNDAWQQQKSQDVIKPSHANNESNRSGWGSQIESNEGSD 1648

Query: 1750 HGFDQVTSEHKSSDTGGWDSQEKMDKPWDKQKSTQASESWGSQNDTQSSWGQPKKAPEEF 1809
            HGFDQVTSE KSSDT GWDSQEKMDKPWDKQKS +AS+SWGSQND+  SWGQP++A EEF
Sbjct: 1649 HGFDQVTSEQKSSDTRGWDSQEKMDKPWDKQKSLEASQSWGSQNDSLGSWGQPQRASEEF 1708

Query: 1810 SWGSQDDSNTQFSQLKPPETSLGWEQQKSPDVSHGWASHKESSEQTSSQGWDNKKNQGSK 1869
            S GSQDDS+TQFSQLKPPETSLGWEQQKSP+VSHGW SHKESSEQTSS GWD KKNQGSK
Sbjct: 1709 SRGSQDDSSTQFSQLKPPETSLGWEQQKSPEVSHGWGSHKESSEQTSSHGWD-KKNQGSK 1768

Query: 1870 GWGGNAGEWKNRKNRPPKSPGILNDDANVRGIYTASGQRLDMFTTEEQDILADIEPIMQS 1929
            GWGGNAGEWKNRKNRPPKSPG+ +DDAN+R +YTASGQRLDMFTTEEQDILADIEPIMQS
Sbjct: 1769 GWGGNAGEWKNRKNRPPKSPGMSSDDANLRALYTASGQRLDMFTTEEQDILADIEPIMQS 1828

Query: 1930 IRKVMHQSGYNDGDPLSAEDQSFVLESVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCF 1989
            IRKVMHQSGYNDGDPLSAEDQSFVL+SVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCF
Sbjct: 1829 IRKVMHQSGYNDGDPLSAEDQSFVLQSVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCF 1888

Query: 1990 YVVTTDGHKEDFSYRKCLDNFIKGKYPDMAEMFVAKYFRKPRPNRNRDRNSASEENENKN 2035
            YVVTTDGHKEDFSYRKCLDNFIKGKYPDMAEMFVAKYFRKPRPNRNRDRN ASEENENK+
Sbjct: 1889 YVVTTDGHKEDFSYRKCLDNFIKGKYPDMAEMFVAKYFRKPRPNRNRDRNPASEENENKS 1948

BLAST of CmUC01G007470 vs. NCBI nr
Match: XP_011655250.1 (DNA-directed RNA polymerase V subunit 1 [Cucumis sativus] >XP_031741011.1 DNA-directed RNA polymerase V subunit 1 [Cucumis sativus] >XP_031741012.1 DNA-directed RNA polymerase V subunit 1 [Cucumis sativus] >XP_031741013.1 DNA-directed RNA polymerase V subunit 1 [Cucumis sativus] >XP_031741014.1 DNA-directed RNA polymerase V subunit 1 [Cucumis sativus] >KGN51090.1 hypothetical protein Csa_009187 [Cucumis sativus])

HSP 1 Score: 3548.8 bits (9201), Expect = 0.0e+00
Identity = 1771/1939 (91.34%), Postives = 1833/1939 (94.53%), Query Frame = 0

Query: 130  CIAAISDCPITHASQLSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHI 189
            CIAAISDCPITHASQLSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHI
Sbjct: 29   CIAAISDCPITHASQLSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHI 88

Query: 190  TELKKMLSLLCLKCLKMKKTKFPSKNIGFAERLLSSCCEDASQVSIREAKKPDGASYLQL 249
            TELKKMLSLLCLKCLKMKKTKFPSKNIGFAERLLSSCCEDASQV+IREAKK DGASYLQL
Sbjct: 89   TELKKMLSLLCLKCLKMKKTKFPSKNIGFAERLLSSCCEDASQVTIREAKKADGASYLQL 148

Query: 250  KVPSRSSLREGFWDFLERYGFRYGDNLTRTLLPCEVKEMLKKIPNETRKKLAGRGYYPQD 309
            KVPSR+SL+E FWDFLERYGFRYGDN TRTLLPCEVKEMLKKIPNETRKKLAGRGYYPQD
Sbjct: 149  KVPSRTSLQERFWDFLERYGFRYGDNFTRTLLPCEVKEMLKKIPNETRKKLAGRGYYPQD 208

Query: 310  GYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEIIKGSRSGAPNFESHEV 369
            GYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEIIKGSRSGAPNFESHEV
Sbjct: 209  GYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEIIKGSRSGAPNFESHEV 268

Query: 370  EANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKAWLEKMRTLFIRKGSGFSS 429
            EANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKAWLEKMRTLFIRKGSGFSS
Sbjct: 269  EANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKAWLEKMRTLFIRKGSGFSS 328

Query: 430  RSVITGDAYKLVSEIGVPFEVAQRITFEERVSVHNIKYLQELVDKKLCLTYRDGSSAYSL 489
            RSVITGDAYKLV+EIGVPFEVAQRITFEERVSVHNI+YLQELVDKKLCLTYRDGSSAYSL
Sbjct: 329  RSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRYLQELVDKKLCLTYRDGSSAYSL 388

Query: 490  REGSTGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHTVKINPLICG 549
            REGS GHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDH VKINPLICG
Sbjct: 389  REGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHVVKINPLICG 448

Query: 550  PLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFR 609
            PLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFR
Sbjct: 449  PLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFR 508

Query: 610  KYFLGKAAAQQLAMFVSSYLPPPALLGVHSESLHWTALQILQTVLPACFDCHGDSYLIKN 669
            KYFLGKAAAQQLAMFVSSYLPPPALLGV S SLHWTALQILQTVLPA FDCHGDSYLIKN
Sbjct: 509  KYFLGKAAAQQLAMFVSSYLPPPALLGVRSGSLHWTALQILQTVLPASFDCHGDSYLIKN 568

Query: 670  SDFLKFDFERDAMPSLVNEILTSIFFQKGPEEVLRFFDSLQPLLMEHIFSEGFSVGLDDY 729
            S+FLKFDF+RDAMPSL+NEILTSIFFQKGPEEVL+FFDSLQPLLMEHIFSEGFSVGLDDY
Sbjct: 569  SNFLKFDFDRDAMPSLINEILTSIFFQKGPEEVLKFFDSLQPLLMEHIFSEGFSVGLDDY 628

Query: 730  SMPMAFLQALQKNIQVISPLLYQLRSTFNELVELQLENHIRSVKVPFTNFILKLSSLGKL 789
            SMPMAFLQALQKNIQV+SPLLYQLRSTFNELVELQLENH+RSVKVPFTNFILKLSSLGKL
Sbjct: 629  SMPMAFLQALQKNIQVLSPLLYQLRSTFNELVELQLENHLRSVKVPFTNFILKLSSLGKL 688

Query: 790  FDSKSDSAINKVVQQIGFLGLQLSDKGKFYSKTLIEDVASLFHNRYSSDKIDYPSAEFGL 849
            FDSKS+SAINKVVQQIGFLGLQLSDKG+FYSK+LIEDVASLFHNRYSSDKIDYPSAEFGL
Sbjct: 689  FDSKSESAINKVVQQIGFLGLQLSDKGRFYSKSLIEDVASLFHNRYSSDKIDYPSAEFGL 748

Query: 850  VKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNV 909
            VKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNV
Sbjct: 749  VKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNV 808

Query: 910  CSNSIIQLEYGIKAGMMQPYSLFPPGEPVGVLAATAMSNPAYKAVLDSTPSSNSSWDMMK 969
            CSNSIIQLEYG+KAGMMQPYSLFPPGEPVGVLAATAMS PAYKAVLDSTPSSNSSWDMMK
Sbjct: 809  CSNSIIQLEYGMKAGMMQPYSLFPPGEPVGVLAATAMSTPAYKAVLDSTPSSNSSWDMMK 868

Query: 970  EILLCKVSFKNEPIDRRVILYLNNCDCGRKYCNENAAYVVKSHLKKVTLKDAAVDFMIEY 1029
            EILLCKVSFKNEPIDRRVILYLNNC CGRKYCNENAAYVVKSHLKKVTLKDAA+DFMIEY
Sbjct: 869  EILLCKVSFKNEPIDRRVILYLNNCACGRKYCNENAAYVVKSHLKKVTLKDAAMDFMIEY 928

Query: 1030 NRQPTPSGLGPGLVGHVHLNKMLLKELKISMTEVLRRCQETISSFKKKKKKIAHALRFSI 1089
            NRQPTPSGLGPGLVGHVHLN+MLLKEL I MTEVLRRCQET+SSFKKKKKKIAHALRFSI
Sbjct: 929  NRQPTPSGLGPGLVGHVHLNRMLLKELNIDMTEVLRRCQETMSSFKKKKKKIAHALRFSI 988

Query: 1090 SEHCSFHQWNGEESTDMPC----------------------------------DPRISSA 1149
            SEHC+FHQWNGEES DMPC                                  DPRI SA
Sbjct: 989  SEHCAFHQWNGEESIDMPCLIFWHQTRDVHLERTAHILADIVFPLLSETIIKGDPRIKSA 1048

Query: 1150 NVIWISPDSTSWQKNPSRWQDGELALDVCLEKSAVKQNGDAWRNVLDCCLPVMHLIDTSR 1209
            +VIWISPDSTSWQKNPSRWQDGELALDVCLEKSAVKQNGDAWRNVLDCCLPV+HLIDT R
Sbjct: 1049 SVIWISPDSTSWQKNPSRWQDGELALDVCLEKSAVKQNGDAWRNVLDCCLPVLHLIDTRR 1108

Query: 1210 SVPYAIKQVQELLGISCAFDQMIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNS 1269
            SVPYAIKQVQELLGISCAFDQMIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNS
Sbjct: 1109 SVPYAIKQVQELLGISCAFDQMIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNS 1168

Query: 1270 SGYKALSRALSIQVPFTEATLFTPRKCFERAAEKCHKDSLSSIVASCSWGKHVAVGTGSR 1329
             GYKALSRAL+IQVPFTEATLFTPRKCFE+AAEKCHKDSLSSIVASCSWGKHVAVGTGSR
Sbjct: 1169 GGYKALSRALNIQVPFTEATLFTPRKCFEKAAEKCHKDSLSSIVASCSWGKHVAVGTGSR 1228

Query: 1330 FDILWDQKELGCKQDEVVDVYNFLHMVRSGKSEESTSACLGEEIEDIMVEDEYGELALSP 1389
            FDILWDQKELGCKQD+VVDVYNFLHMVRSGKSEE TSACLGEEIEDIMVEDEYGEL LSP
Sbjct: 1229 FDILWDQKELGCKQDDVVDVYNFLHMVRSGKSEEPTSACLGEEIEDIMVEDEYGELTLSP 1288

Query: 1390 EPFSTSEKPVFEDSAEFEHCLDNYPGESKWEKAPSLGAVSTGGGQWENNENGKATNSSDD 1449
            EPFSTSEKPVFEDSAEFEHCLDNYPGESKWEKAPSLGAVSTGGGQWE+NENGKATNSSD 
Sbjct: 1289 EPFSTSEKPVFEDSAEFEHCLDNYPGESKWEKAPSLGAVSTGGGQWESNENGKATNSSDG 1348

Query: 1450 NDWSGWGRKAEPDAAITNAPENISNSGWDTTPSWGNKATKTSNNNDWSNVGTKEVERDSI 1509
            NDWSGWGRKAEPD  +TNA EN SNS WDTT SWGNKAT +SN+NDWSN  TKEVERDS 
Sbjct: 1349 NDWSGWGRKAEPDVTVTNAQENTSNSAWDTTSSWGNKATNSSNDNDWSNCSTKEVERDSF 1408

Query: 1510 TSMENTPKSGGWDTASTWGTKTKDVDSFKGETAPEKSNSWSGLQNDKTETQDAFHKKVEM 1569
            TSME TPKSGGWD+ASTWGTKTKD DSFK ETAP+KS+ WSGLQ DK ETQDAFHKK EM
Sbjct: 1409 TSMEKTPKSGGWDSASTWGTKTKD-DSFKRETAPKKSSQWSGLQKDKAETQDAFHKKAEM 1468

Query: 1570 ASKSSGWEDKAWSRETSKTEDSWSSQVKDKAESFQVQVQEVSTKTNGWGSAEGWSKNSGD 1629
            ASKS GWEDKAWSR TSKTED+WSSQVKDKAESFQVQVQEVS+KTNGWGS  GW+KNSG 
Sbjct: 1469 ASKSGGWEDKAWSRGTSKTEDNWSSQVKDKAESFQVQVQEVSSKTNGWGSTGGWTKNSGG 1528

Query: 1630 DHQSVAGWNDGQASMDREKVSDRWDSRATQRMESQRTSSWGSPTVCDSKDSFSSKAMEHS 1689
            DHQS AGWNDGQASMDREKVSDRWD +ATQ++ES +TSSWGSPTV DSKDSF SKA++HS
Sbjct: 1529 DHQSEAGWNDGQASMDREKVSDRWDRKATQKLESHQTSSWGSPTVGDSKDSFPSKAVDHS 1588

Query: 1690 DSIALNHSWDQQKSPEASQGFSNDVWGQQKSREVIKPSHVNNESNRHGWSSQIESHEGSG 1749
            DS+ +NHSWD+QKSPEASQGF ND WGQQKSR+VIKPS  NNESN  GW SQIES+EGS 
Sbjct: 1589 DSV-VNHSWDRQKSPEASQGFGNDAWGQQKSRDVIKPSLANNESNLSGWGSQIESNEGSD 1648

Query: 1750 HGFDQVTSEHKSSDTGGWDSQEKMDKPWDKQKSTQASESWGSQNDTQSSWGQPKKAPEEF 1809
            HGFDQVT+E KSSDT GWDSQEK DKPWDKQKS +AS+SWGSQND+  SWGQP++A EE 
Sbjct: 1649 HGFDQVTNEQKSSDTRGWDSQEKTDKPWDKQKSLEASQSWGSQNDSLGSWGQPQRASEEC 1708

Query: 1810 SWGSQDDSNTQFSQLKPPETSLGWEQQKSPDVSHGWASHKESSEQTSSQGWDNKKNQGSK 1869
            S  SQDDS+TQFSQLKPPETSLGWEQQKSP+VSHGW S+KESSEQTSS GWD KKNQGSK
Sbjct: 1709 SRESQDDSSTQFSQLKPPETSLGWEQQKSPEVSHGWGSNKESSEQTSSHGWD-KKNQGSK 1768

Query: 1870 GWGGNAGEWKNRKNRPPKSPGILNDDANVRGIYTASGQRLDMFTTEEQDILADIEPIMQS 1929
            GWGGNAGEWKNRKNRPPKSPG+ NDDAN+R +YTASGQRLDMFT+EEQDILADIEPIMQS
Sbjct: 1769 GWGGNAGEWKNRKNRPPKSPGMSNDDANLRALYTASGQRLDMFTSEEQDILADIEPIMQS 1828

Query: 1930 IRKVMHQSGYNDGDPLSAEDQSFVLESVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCF 1989
            IRKVMHQSGYNDGDPLSAEDQSFVL+SVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCF
Sbjct: 1829 IRKVMHQSGYNDGDPLSAEDQSFVLQSVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCF 1888

Query: 1990 YVVTTDGHKEDFSYRKCLDNFIKGKYPDMAEMFVAKYFRKPRPNRNRDRNSASEENENKN 2035
            YVVTTDGHKEDFSYRKCLDNFIKGKYPD+AEMFVAKYFRKPRPNRNRDRN ASEENENK+
Sbjct: 1889 YVVTTDGHKEDFSYRKCLDNFIKGKYPDLAEMFVAKYFRKPRPNRNRDRNPASEENENKS 1948

BLAST of CmUC01G007470 vs. NCBI nr
Match: XP_022953816.1 (DNA-directed RNA polymerase V subunit 1 [Cucurbita moschata])

HSP 1 Score: 3285.4 bits (8517), Expect = 0.0e+00
Identity = 1660/1997 (83.12%), Postives = 1757/1997 (87.98%), Query Frame = 0

Query: 130  CIAAISDCPITHASQLSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHI 189
            CIAAISDCPITHASQLSNPFLGLPIE+GKCESCGTSEPGKCEGHFGYIELPIPIYHPNHI
Sbjct: 29   CIAAISDCPITHASQLSNPFLGLPIEYGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHI 88

Query: 190  TELKKMLSLLCLKCLKMKKTKFPSKNIGFAERLLSSCCEDASQVSIREAKKPDGASYLQL 249
            TELKKMLSLLCLKCLKMKK KFPSKN+GFAERLL SCCEDASQVSIREAKK DGA+YLQL
Sbjct: 89   TELKKMLSLLCLKCLKMKKNKFPSKNVGFAERLL-SCCEDASQVSIREAKKSDGATYLQL 148

Query: 250  KVPSRSSLREGFWDFLERYGFRYGDNLTRTLLPCEVKEMLKKIPNETRKKLAGRGYYPQD 309
            KVPSR+SLREGFWDFLERYGFRYGDNLTRTLLPCEVKEMLKKIPNETRKKLAG+GYYPQD
Sbjct: 149  KVPSRTSLREGFWDFLERYGFRYGDNLTRTLLPCEVKEMLKKIPNETRKKLAGKGYYPQD 208

Query: 310  GYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEIIKGSRSGAPNFESHEV 369
            GY+LQYLPVPPNCLSVPEISDGVT+MSSDPAV MLKK+LKQVEIIKGSRSGAPNFE+HEV
Sbjct: 209  GYVLQYLPVPPNCLSVPEISDGVTIMSSDPAVLMLKKVLKQVEIIKGSRSGAPNFEAHEV 268

Query: 370  EANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKAWLEKMRTLFIRKGSGFSS 429
            EANDLQ+AVDQYLQVRGTVKASRGIDAR+GVNKELNDPSTKAWLEKMRTLFIRKGSGFSS
Sbjct: 269  EANDLQMAVDQYLQVRGTVKASRGIDARYGVNKELNDPSTKAWLEKMRTLFIRKGSGFSS 328

Query: 430  RSVITGDAYKLVSEIGVPFEVAQRITFEERVSVHNIKYLQELVDKKLCLTYRDGSSAYSL 489
            RSVITGDAYKLV+EIGVPFEVAQRITFEERVSVHNIKYLQELVDKKLCLTYRDGSSAYSL
Sbjct: 329  RSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIKYLQELVDKKLCLTYRDGSSAYSL 388

Query: 490  REGSTGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHTVKINPLICG 549
            REGS GHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHTVKINPLICG
Sbjct: 389  REGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHTVKINPLICG 448

Query: 550  PLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFR 609
            PL ADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFR
Sbjct: 449  PLGADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFR 508

Query: 610  KYFLGKAAAQQLAMFVSSYLPPPALLGVHSESLHWTALQILQTVLPACFDCHGDSYLIKN 669
            KYF GKAAAQQLAMFV+S LPPPALLGV S SLHWTALQILQTVLP+CFDCHGDSYLIKN
Sbjct: 509  KYFFGKAAAQQLAMFVTSSLPPPALLGVRSNSLHWTALQILQTVLPSCFDCHGDSYLIKN 568

Query: 670  SDFLKFDFERDAMPSLVNEILTSIFFQKGPEEVLRFFDSLQPLLMEHIFSEGFSVGLDDY 729
            SDFLKFDF+RDAMPSL+NEI+TSIFFQKGPEEV+RFFDSLQPLLMEH+FSEGFSV LDDY
Sbjct: 569  SDFLKFDFDRDAMPSLINEIVTSIFFQKGPEEVMRFFDSLQPLLMEHVFSEGFSVSLDDY 628

Query: 730  SMPMAFLQALQKNIQVISPLLYQLRSTFNELVELQLENHIRSVKVPFTNFILKLSSLGKL 789
            SMPMAFLQALQKNIQVISPLLYQLRS+FNELVELQLENHIRSVKVPFTNFILKLSSLGKL
Sbjct: 629  SMPMAFLQALQKNIQVISPLLYQLRSSFNELVELQLENHIRSVKVPFTNFILKLSSLGKL 688

Query: 790  FDSKSDSAINKVVQQIGFLGLQLSDKGKFYSKTLIEDVASLFHNRYSSDKIDYPSAEFGL 849
            FDSKSD+AINKVVQQIGFLGLQLSDKGKFYSKTLI+DVASLFHNRYSSDK DYPSAEFGL
Sbjct: 689  FDSKSDAAINKVVQQIGFLGLQLSDKGKFYSKTLIDDVASLFHNRYSSDKNDYPSAEFGL 748

Query: 850  VKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNV 909
            VKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNV
Sbjct: 749  VKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNV 808

Query: 910  CSNSIIQLEYGIKAGMMQPYSLFPPGEPVGVLAATAMSNPAYKAVLDSTPSSNSSWDMMK 969
            CSNSIIQLEYGIKAGMM+PY LFPPGEPVGVLAATAMS PAYKAVLDSTPSSNSSWDMMK
Sbjct: 809  CSNSIIQLEYGIKAGMMKPYGLFPPGEPVGVLAATAMSTPAYKAVLDSTPSSNSSWDMMK 868

Query: 970  EILLCKVSFKNEPIDRRVILYLNNCDCGRKYCNENAAYVVKSHLKKVTLKDAAVDFMIEY 1029
            EILLCKV FKNEP+DRRVILYLNNCDCGRK+CNENAAYVVKSHLKKVTLKD A+DFMIEY
Sbjct: 869  EILLCKVGFKNEPVDRRVILYLNNCDCGRKHCNENAAYVVKSHLKKVTLKDVAMDFMIEY 928

Query: 1030 NRQPTPSGLGPGLVGHVHLNKMLLKELKISMTEVLRRCQETISSFKKKKKKIAHALRFSI 1089
            NRQPTPS LGPGLVGHVHLN++LL+EL+I+M +VLRRCQETISSFKKKKKK+A ALRF I
Sbjct: 929  NRQPTPSALGPGLVGHVHLNQVLLEELRINMADVLRRCQETISSFKKKKKKLAPALRFFI 988

Query: 1090 SEHCSFHQWNGEESTDMPC----------------------------------DPRISSA 1149
            SEHCSFHQ NGEE TDMPC                                  DPRISSA
Sbjct: 989  SEHCSFHQRNGEERTDMPCLTFWLETRDVHLERTSHILADVVFPLLSETIIKGDPRISSA 1048

Query: 1150 NVIWISPDSTSWQKNPSRWQDGELALDVCLEKSAVKQNGDAWRNVLDCCLPVMHLIDTSR 1209
            NVIWIS DSTSW++NPSRWQDGELALDVCLEKSAVK++GDAWRNVLDCCLP++HLIDT R
Sbjct: 1049 NVIWISSDSTSWERNPSRWQDGELALDVCLEKSAVKEDGDAWRNVLDCCLPIIHLIDTRR 1108

Query: 1210 SVPYAIKQVQELLGISCAFDQMIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNS 1269
            SVPYAIKQVQ+LLGISCAFDQ IQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNS
Sbjct: 1109 SVPYAIKQVQKLLGISCAFDQTIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNS 1168

Query: 1270 SGYKALSRALSIQVPFTEATLFTPRKCFERAAEKCHKDSLSSIVASCSWGKHVAVGTGSR 1329
             GYKALSRAL+IQVPFTEATLFTPR+CFERAA KCHKDSLSSIVASCSWGKHVAVGTGS+
Sbjct: 1169 GGYKALSRALNIQVPFTEATLFTPRRCFERAATKCHKDSLSSIVASCSWGKHVAVGTGSK 1228

Query: 1330 FDILWDQKELGCKQDEVVDVYNFLHMVRSGKSEESTSACLGEEIEDIMVEDEYGELALSP 1389
            FDILWDQKELG KQ +VVDVYNFLHMVRSGKSEESTSACLG EI+D+MVEDEYGEL LSP
Sbjct: 1229 FDILWDQKELGSKQADVVDVYNFLHMVRSGKSEESTSACLGVEIDDLMVEDEYGELTLSP 1288

Query: 1390 EPFSTSEKPVFEDSAEFEHCLDNYPGESKWEKAPSLGAVSTGGGQWENNENGKATNSSDD 1449
            EPFSTSEKPVFEDSAEFEHCLDN+          SLGA S GGGQWE+NEN K   +S D
Sbjct: 1289 EPFSTSEKPVFEDSAEFEHCLDNH----------SLGAASAGGGQWESNENSK---TSQD 1348

Query: 1450 NDWSGWGRKAEPDAAITNAPENISNSGWDTTPSWGNKATKTSNNNDWSNVGTKEVERDSI 1509
            NDWSGWG K +PD          S SGWDTTPSWGNKATK SN+N WS   TKEVERDS 
Sbjct: 1349 NDWSGWGTKVDPDV-------TTSKSGWDTTPSWGNKATKASNDNGWS---TKEVERDSF 1408

Query: 1510 TSMENTPKSGGWDTASTWGTKTKDVDSFK-GETAPEKSNSWSGLQNDKTETQDAFHKKVE 1569
            TS +NTPK+GGWD+A+TWG KTKDVDSFK GETAPEKSN WSGLQ++K ETQDAFHKKVE
Sbjct: 1409 TSTKNTPKTGGWDSAATWGMKTKDVDSFKEGETAPEKSNVWSGLQSNKAETQDAFHKKVE 1468

Query: 1570 MASKSSGWEDKAWSRETSKTEDSWSSQVKDKAESFQVQVQEVSTKTNGWGSAEGWSKNSG 1629
            +ASKS GW+DKAWSR TSKTED+WSS+ KDKAE +   VQEVS  +NGWGSA GW KN+G
Sbjct: 1469 IASKSGGWDDKAWSRGTSKTEDNWSSRAKDKAEPWLAHVQEVSPNSNGWGSAGGWGKNAG 1528

Query: 1630 DDHQSVAGWNDGQASMDREKVSDRWDSRATQRMESQRTSSWGSPTVCDSKDSFSSKAMEH 1689
            D  +S AG NDGQASMD EKVSDRWD R  QR               DSKD+F SK +EH
Sbjct: 1529 DGDESEAGRNDGQASMDLEKVSDRWDGRDVQR-------------TGDSKDNFQSKVVEH 1588

Query: 1690 SDSIALNHSWDQQKSPEASQG-FSNDVWGQQKSREVIKPSHVNNESNRHGWSSQIESHEG 1749
             DS+A+NHSWDQQK PE SQG + ND WGQQKS EV KPSHVNNESNRHGW S+IE +EG
Sbjct: 1589 GDSVAINHSWDQQKPPEVSQGEYGNDAWGQQKSWEVKKPSHVNNESNRHGWGSRIELNEG 1648

Query: 1750 SGHGFDQVTSEHKSSDTGGWDSQEKMDKPWDKQKSTQASESWGSQNDTQS---------- 1809
              H  DQVT     +D+GGWDSQ++MDKPW+KQKST+AS+SWGSQ D+QS          
Sbjct: 1649 PNHECDQVT-----NDSGGWDSQKQMDKPWEKQKSTEASQSWGSQKDSQSWGSQKDSQSW 1708

Query: 1810 ----------------------------------------------SWGQPKKAPEEFSW 1869
                                                          SWGQ ++ P+EFS 
Sbjct: 1709 GSQKDSQSWGSQKDSQSWGTQKDSQSWGSQKDSQSWGSLKDSQSQGSWGQLQRTPKEFSQ 1768

Query: 1870 GSQDDSNTQFSQLKPPETSLGWEQQKSPDVSHGWASHKESSEQTSSQGWDNKKNQGSKGW 1929
             SQDDSN  F   KPPETS GWEQQKSP+VSHGW SH +SS+ TSS GWDNKKNQGSK W
Sbjct: 1769 ESQDDSNKHFDNQKPPETSSGWEQQKSPEVSHGWGSHIDSSDSTSSHGWDNKKNQGSKSW 1828

Query: 1930 GGNAGEWKNRKNRPPKSPGILNDDANVRGIYTASGQRLDMFTTEEQDILADIEPIMQSIR 1989
            GGN GEWKNRKNRPPKSPG+ +DDAN+RG+YTASGQRLDMFTTEEQDILADIEPIMQSIR
Sbjct: 1829 GGNVGEWKNRKNRPPKSPGMTSDDANLRGLYTASGQRLDMFTTEEQDILADIEPIMQSIR 1888

Query: 1990 KVMHQSGYNDGDPLSAEDQSFVLESVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCFYV 2035
            K+MHQSGYNDGDPLSAEDQSF+L+SVFNFHPDKA KMGAGIDHFMVSRHSSFQESRCFYV
Sbjct: 1889 KIMHQSGYNDGDPLSAEDQSFILQSVFNFHPDKAVKMGAGIDHFMVSRHSSFQESRCFYV 1948

BLAST of CmUC01G007470 vs. NCBI nr
Match: XP_023517905.1 (DNA-directed RNA polymerase V subunit 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 3281.1 bits (8506), Expect = 0.0e+00
Identity = 1661/2006 (82.80%), Postives = 1757/2006 (87.59%), Query Frame = 0

Query: 130  CIAAISDCPITHASQLSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHI 189
            CIAAISDCPITHASQLSNPFLGLPIE+GKCESCGTSEPGKCEGHFGYIELPIPIYHPNHI
Sbjct: 29   CIAAISDCPITHASQLSNPFLGLPIEYGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHI 88

Query: 190  TELKKMLSLLCLKCLKMKKTKFPSKNIGFAERLLSSCCEDASQVSIREAKKPDGASYLQL 249
            TELKKMLSLLCLKCLKMKK KFPSKN+GFAERLL SCCEDASQVSIREAKK DGA+YLQL
Sbjct: 89   TELKKMLSLLCLKCLKMKKNKFPSKNVGFAERLL-SCCEDASQVSIREAKKSDGATYLQL 148

Query: 250  KVPSRSSLREGFWDFLERYGFRYGDNLTRTLLPCEVKEMLKKIPNETRKKLAGRGYYPQD 309
            KVPSR+SLREGFWDFLERYGFRYGDNLTRTLLPCEVKEMLKKIPNETRKKLAG+GYYPQD
Sbjct: 149  KVPSRTSLREGFWDFLERYGFRYGDNLTRTLLPCEVKEMLKKIPNETRKKLAGKGYYPQD 208

Query: 310  GYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEIIKGSRSGAPNFESHEV 369
            GY+LQYLPVPPNCLSVPEISDGVT+MSSDPAV MLKK+LKQVEIIKGSRSGAPNFE+HEV
Sbjct: 209  GYVLQYLPVPPNCLSVPEISDGVTIMSSDPAVLMLKKVLKQVEIIKGSRSGAPNFEAHEV 268

Query: 370  EANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKAWLEKMRTLFIRKGSGFSS 429
            EANDLQ+AVDQYLQVRGTVKASRGIDAR+GVNKELNDPSTKAWLEKMRTLFIRKGSGFSS
Sbjct: 269  EANDLQMAVDQYLQVRGTVKASRGIDARYGVNKELNDPSTKAWLEKMRTLFIRKGSGFSS 328

Query: 430  RSVITGDAYKLVSEIGVPFEVAQRITFEERVSVHNIKYLQELVDKKLCLTYRDGSSAYSL 489
            RSVITGDAYKLV+EIGVPFEVAQRITFEERVSVHNIKYLQELVDKKLCLTYRDGSSAYSL
Sbjct: 329  RSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIKYLQELVDKKLCLTYRDGSSAYSL 388

Query: 490  REGSTGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHTVKINPLICG 549
            REGS GHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHTVKINPLICG
Sbjct: 389  REGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHTVKINPLICG 448

Query: 550  PLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFR 609
            PL ADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFR
Sbjct: 449  PLGADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFR 508

Query: 610  KYFLGKAAAQQLAMFVSSYLPPPALLGVHSESLHWTALQILQTVLPACFDCHGDSYLIKN 669
            KYFLGKAAAQQLAMFV+S LPPPALLGV S +LHWTALQILQTVLPACFDCHGDSYLIKN
Sbjct: 509  KYFLGKAAAQQLAMFVTSSLPPPALLGVRSNTLHWTALQILQTVLPACFDCHGDSYLIKN 568

Query: 670  SDFLKFDFERDAMPSLVNEILTSIFFQKGPEEVLRFFDSLQPLLMEHIFSEGFSVGLDDY 729
            SDFLKFDF+RDAMPSL+NEI+TSIFFQKGPEEV+RFFDSLQPLLMEH+FSEGFSV LDDY
Sbjct: 569  SDFLKFDFDRDAMPSLINEIVTSIFFQKGPEEVMRFFDSLQPLLMEHVFSEGFSVSLDDY 628

Query: 730  SMPMAFLQALQKNIQVISPLLYQLRSTFNELVELQLENHIRSVKVPFTNFILKLSSLGKL 789
            SMPMAFLQALQKNIQVISPLLYQLRS+FNELVELQLENHIRSVKVPFTNFILKLSSLGKL
Sbjct: 629  SMPMAFLQALQKNIQVISPLLYQLRSSFNELVELQLENHIRSVKVPFTNFILKLSSLGKL 688

Query: 790  FDSKSDSAINKVVQQIGFLGLQLSDKGKFYSKTLIEDVASLFHNRYSSDKIDYPSAEFGL 849
            FDSKSD+AINKVVQQIGFLGLQLSDKGKFYSKTLI+DVASLFHNRYSSDK DYPSAEFGL
Sbjct: 689  FDSKSDAAINKVVQQIGFLGLQLSDKGKFYSKTLIDDVASLFHNRYSSDKNDYPSAEFGL 748

Query: 850  VKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNV 909
            VKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNV
Sbjct: 749  VKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNV 808

Query: 910  CSNSIIQLEYGIKAGMMQPYSLFPPGEPVGVLAATAMSNPAYKAVLDSTPSSNSSWDMMK 969
            CSNSIIQLEYGIKAGMM+PY LFPPGEPVGVLAATAMS PAYKAVLDSTPSSNSSWDMMK
Sbjct: 809  CSNSIIQLEYGIKAGMMKPYGLFPPGEPVGVLAATAMSTPAYKAVLDSTPSSNSSWDMMK 868

Query: 970  EILLCKVSFKNEPIDRRVILYLNNCDCGRKYCNENAAYVVKSHLKKVTLKDAAVDFMIEY 1029
            EILLCKV FKNEP+DRRVILYLNNCDCGRK+CNENAAYVVKSHLKKVTLKD A+DFMIEY
Sbjct: 869  EILLCKVGFKNEPVDRRVILYLNNCDCGRKHCNENAAYVVKSHLKKVTLKDVAMDFMIEY 928

Query: 1030 NRQPTPSGLGPGLVGHVHLNKMLLKELKISMTEVLRRCQETISSFKKKKKKIAHALRFSI 1089
            NRQPTPS LGPGLVGHVHLN++LL+EL+I+M +VLRRCQETISSFKKKKKK+A A+RF I
Sbjct: 929  NRQPTPSALGPGLVGHVHLNQVLLEELRINMADVLRRCQETISSFKKKKKKLAPAVRFFI 988

Query: 1090 SEHCSFHQWNGEESTDMPC----------------------------------DPRISSA 1149
            SEHCSFHQ NGEE TDMPC                                  DPRISSA
Sbjct: 989  SEHCSFHQRNGEERTDMPCLTFWLETRDVHLERTSHILADVVFPLLSETIIKGDPRISSA 1048

Query: 1150 NVIWISPDSTSWQKNPSRWQDGELALDVCLEKSAVKQNGDAWRNVLDCCLPVMHLIDTSR 1209
            NVIWI+ DSTSW++NPSRWQDGELALDVCLEKSAVK++GDAWRNVLDCCLP++HLIDT R
Sbjct: 1049 NVIWITSDSTSWERNPSRWQDGELALDVCLEKSAVKEDGDAWRNVLDCCLPIIHLIDTRR 1108

Query: 1210 SVPYAIKQVQELLGISCAFDQMIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNS 1269
            SVPYAIKQVQ+LLGISCAFDQ IQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNS
Sbjct: 1109 SVPYAIKQVQKLLGISCAFDQTIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNS 1168

Query: 1270 SGYKALSRALSIQVPFTEATLFTPRKCFERAAEKCHKDSLSSIVASCSWGKHVAVGTGSR 1329
             GYKALSRAL+IQVPFTEATLFTPR+CFERAA KCHKDSLSSIVASCSWGKHVAVGTGS+
Sbjct: 1169 GGYKALSRALNIQVPFTEATLFTPRRCFERAATKCHKDSLSSIVASCSWGKHVAVGTGSK 1228

Query: 1330 FDILWDQKELGCKQDEVVDVYNFLHMVRSGKSEESTSACLGEEIEDIMVEDEYGELALSP 1389
            FDILWDQKELG KQ +VVDVYNFLHMVRSGKSEESTSACLG EI+D+MVEDEYGEL LSP
Sbjct: 1229 FDILWDQKELGSKQADVVDVYNFLHMVRSGKSEESTSACLGVEIDDLMVEDEYGELTLSP 1288

Query: 1390 EPFSTSEKPVFEDSAEFEHCLDNYPGESKWEKAPSLGAVSTGGGQWENNENGKATNSSDD 1449
            EPFSTSEKPVFEDSAEFEHCLDN+          SLGA S GGGQWE NEN KA   S D
Sbjct: 1289 EPFSTSEKPVFEDSAEFEHCLDNH----------SLGAASAGGGQWEINENSKA---SQD 1348

Query: 1450 NDWSGWGRKAEPDAAITNAPENISNSGWDTTPSWGNKATKTSNNNDWSNVGTKEVERDSI 1509
            NDWSGWG K +PD          S SGWDTT SWGNKATK SN+N WS   TKEVERDS 
Sbjct: 1349 NDWSGWGTKVDPDV-------TTSKSGWDTTTSWGNKATKASNDNGWS---TKEVERDSF 1408

Query: 1510 TSMENTPKSGGWDTASTWGTKTKDVDSFK-GETAPEKSNSWSGLQNDKTETQDAFHKKVE 1569
            TS +NTPK+GGWD+A+TWGTKTKDVDSFK GETAPEKSN WSGLQ++K ETQDAFHKKVE
Sbjct: 1409 TSTKNTPKTGGWDSAATWGTKTKDVDSFKEGETAPEKSNVWSGLQSNKAETQDAFHKKVE 1468

Query: 1570 MASKSSGWEDKAWSRETSKTEDSWSSQVKDKAESFQVQVQEVSTKTNGWGSAEGWSKNSG 1629
            +ASKS GW+DKAWSR TSKTED+WSS+ KDKAE +Q  VQEVS  +NGWGSA GW KN+G
Sbjct: 1469 IASKSGGWDDKAWSRGTSKTEDNWSSRAKDKAEPWQAHVQEVSPNSNGWGSAGGWGKNAG 1528

Query: 1630 DDHQSVAGWNDGQASMDREKVSDRWDSRATQRMESQRTSSWGSPTVCDSKDSFSSKAMEH 1689
            D  +S AG NDGQASMD EKVSDRWD R  QR               DSKD F SK +EH
Sbjct: 1529 DGDESEAGRNDGQASMDLEKVSDRWDGRDVQR-------------TGDSKDKFQSKMVEH 1588

Query: 1690 SDSIALNHSWDQQKSPEASQG-FSNDVWGQQKSREVIKPSHVNNESNRHGWSSQIESHEG 1749
             DS+A+NHSWDQQK PE SQG + ND WG+QKS EV KPSHVNNESNRHGW S+IE +EG
Sbjct: 1589 GDSVAINHSWDQQKPPEVSQGEYGNDAWGKQKSWEVKKPSHVNNESNRHGWGSRIELNEG 1648

Query: 1750 SGHGFDQVTSEHKSSDTGGWDSQEKMDKPWDKQKSTQASESWGSQNDTQS---------- 1809
              H  DQVT     +D+GGWDSQ+KMDKPW+KQKST+AS+SWGSQ D+QS          
Sbjct: 1649 PNHECDQVT-----NDSGGWDSQKKMDKPWEKQKSTEASQSWGSQKDSQSWGSQKDSQSW 1708

Query: 1810 -------------------------------------------------------SWGQP 1869
                                                                   SWGQ 
Sbjct: 1709 GSQKDSQSRGYQKDSQSRGSQKDSQSWGSQKDSQSWGSQKDSQSWGSQKDSHSQGSWGQL 1768

Query: 1870 KKAPEEFSWGSQDDSNTQFSQLKPPETSLGWEQQKSPDVSHGWASHKESSEQTSSQGWDN 1929
            ++ P+EFS  SQDDSN  F   KPPETS GWEQQKSP+VSHGW SH +SS+ TSS GWDN
Sbjct: 1769 QRTPKEFSQESQDDSNKHFDNQKPPETSSGWEQQKSPEVSHGWGSHIDSSDLTSSHGWDN 1828

Query: 1930 KKNQGSKGWGGNAGEWKNRKNRPPKSPGILNDDANVRGIYTASGQRLDMFTTEEQDILAD 1989
            KKNQGSK WGGN GEWKNRKNRPPKSPG+ +DDAN+RG+YTASGQRLDMFTTEEQDILAD
Sbjct: 1829 KKNQGSKSWGGNVGEWKNRKNRPPKSPGMTSDDANLRGLYTASGQRLDMFTTEEQDILAD 1888

Query: 1990 IEPIMQSIRKVMHQSGYNDGDPLSAEDQSFVLESVFNFHPDKAAKMGAGIDHFMVSRHSS 2035
            IEPIMQSIRK+MHQSGYNDGDPLSAEDQSF+L+SVFNFHPDKA KMGAGIDHFMVSRHSS
Sbjct: 1889 IEPIMQSIRKIMHQSGYNDGDPLSAEDQSFILQSVFNFHPDKAVKMGAGIDHFMVSRHSS 1948

BLAST of CmUC01G007470 vs. ExPASy Swiss-Prot
Match: Q5D869 (DNA-directed RNA polymerase V subunit 1 OS=Arabidopsis thaliana OX=3702 GN=NRPE1 PE=1 SV=1)

HSP 1 Score: 1765.0 bits (4570), Expect = 0.0e+00
Identity = 990/1981 (49.97%), Postives = 1285/1981 (64.87%), Query Frame = 0

Query: 126  NHPQCIAAISDCPITHASQLSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPIYH 185
            +H  CI +IS+  I H SQL+N FLGLP+EFGKCESCG +EP KCEGHFGYI+LP+PIYH
Sbjct: 24   HHEICIQSISESAINHPSQLTNAFLGLPLEFGKCESCGATEPDKCEGHFGYIQLPVPIYH 83

Query: 186  PNHITELKKMLSLLCLKCLKMKKTKFPSKNIGFAERLLSSCCEDASQVSIREAKKPDGAS 245
            P H+ ELK+MLSLLCLKCLK+KK K  S   G A+RLL  CCE+ASQ+SI++ +  DGAS
Sbjct: 84   PAHVNELKQMLSLLCLKCLKIKKAKGTSG--GLADRLLGVCCEEASQISIKD-RASDGAS 143

Query: 246  YLQLKVPSRSSLREGFWDFLERYGFRYGDNLTRTLLPCEVKEMLKKIPNETRKKLAGRGY 305
            YL+LK+PSRS L+ G W+FLERYG+RYG + TR LL  EVKE+L++IP E+RKKL  +G+
Sbjct: 144  YLELKLPSRSRLQPGCWNFLERYGYRYGSDYTRPLLAREVKEILRRIPEESRKKLTAKGH 203

Query: 306  YPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEIIKGSRSGAPNFE 365
             PQ+GYIL+YLPVPPNCLSVPE SDG + MS DP+   LK +LK+V  IK SRSG  NFE
Sbjct: 204  IPQEGYILEYLPVPPNCLSVPEASDGFSTMSVDPSRIELKDVLKKVIAIKSSRSGETNFE 263

Query: 366  SHEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKAWLEKMRTLFIRKGS 425
            SH+ EA+++   VD YLQVRGT KA+R ID R+GV+K  +  S+KAW EKMRTLFIRKGS
Sbjct: 264  SHKAEASEMFRVVDTYLQVRGTAKAARNIDMRYGVSKISDSSSSKAWTEKMRTLFIRKGS 323

Query: 426  GFSSRSVITGDAYKLVSEIGVPFEVAQRITFEERVSVHNIKYLQELVDKKLCLTYRDGSS 485
            GFSSRSVITGDAY+ V+E+G+P E+AQRITFEERVSVHN  YLQ+LVD KLCL+Y  GS+
Sbjct: 324  GFSSRSVITGDAYRHVNEVGIPIEIAQRITFEERVSVHNRGYLQKLVDDKLCLSYTQGST 383

Query: 486  AYSLREGSTGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHTVKINP 545
             YSLR+GS GHT LKPGQ+VHRR+MDGD+VFINRPPTTHKHSLQALRVY+H+D+TVKINP
Sbjct: 384  TYSLRDGSKGHTELKPGQVVHRRVMDGDVVFINRPPTTHKHSLQALRVYVHEDNTVKINP 443

Query: 546  LICGPLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLK 605
            L+C PLSADFDGDC+HLFYPQS++AKAEV+ LFSVEKQLLSSH+G L LQ+ +DSLLSL+
Sbjct: 444  LMCSPLSADFDGDCVHLFYPQSLSAKAEVMELFSVEKQLLSSHTGQLILQMGSDSLLSLR 503

Query: 606  MMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVHSESLHWTALQILQTVLPACFDCHGDSY 665
            +M  + FL KA AQQLAM+ S  LPPPAL         WT  QILQ   P    C GD +
Sbjct: 504  VMLERVFLDKATAQQLAMYGSLSLPPPALRKSSKSGPAWTVFQILQLAFPERLSCKGDRF 563

Query: 666  LIKNSDFLKFDFERDAMPSLVNEILTSIFFQKGPEEVLRFFDSLQPLLMEHIFSEGFSVG 725
            L+  SD LKFDF  DAM S++NEI+TSIF +KGP+E L FFDSLQPLLME +F+EGFS+ 
Sbjct: 564  LVDGSDLLKFDFGVDAMGSIINEIVTSIFLEKGPKETLGFFDSLQPLLMESLFAEGFSLS 623

Query: 726  LDDYSMPMAFLQALQK-NIQVISPLLYQLRSTFNELVELQLENHIRSVKVPFTNFILKLS 785
            L+D SM  A +  +    I+ ISP++ +LR ++ +  ELQLEN I  VK    NF+LK  
Sbjct: 624  LEDLSMSRADMDVIHNLIIREISPMVSRLRLSYRD--ELQLENSIHKVKEVAANFMLKSY 683

Query: 786  SLGKLFDSKSDSAINKVVQQIGFLGLQLSDKGKFYSKTLIEDVASLFHNRYSSDKIDYPS 845
            S+  L D KS+SAI K+VQQ GFLGLQLSDK KFY+KTL+ED+A     +Y        S
Sbjct: 684  SIRNLIDIKSNSAITKLVQQTGFLGLQLSDKKKFYTKTLVEDMAIFCKRKYGRIS---SS 743

Query: 846  AEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDG 905
             +FG+VKGCFFHGLDPYEEM HSI+ REV+VRSSRGL EPGTLFKNLMA+LRD+VI  DG
Sbjct: 744  GDFGIVKGCFFHGLDPYEEMAHSIAAREVIVRSSRGLAEPGTLFKNLMAVLRDIVITNDG 803

Query: 906  TVRNVCSNSIIQLEYGIKAGMMQPYSLFPPGEPVGVLAATAMSNPAYKAVLDSTPSSNSS 965
            TVRN CSNS+IQ +YG+ +       LF  GEPVGVLAATAMSNPAYKAVLDS+P+SNSS
Sbjct: 804  TVRNTCSNSVIQFKYGVDSERGH-QGLFEAGEPVGVLAATAMSNPAYKAVLDSSPNSNSS 863

Query: 966  WDMMKEILLCKVSFKNEPIDRRVILYLNNCDCGRKYCNENAAYVVKSHLKKVTLKDAAVD 1025
            W++MKE+LLCKV+F+N   DRRVILYLN C CG+++C ENAA  V++ L KV+LKD AV+
Sbjct: 864  WELMKEVLLCKVNFQNTTNDRRVILYLNECHCGKRFCQENAACTVRNKLNKVSLKDTAVE 923

Query: 1026 FMIEYNRQPTPS---GLGPGLVGHVHLNKMLLKELKISMTEVLRRCQETISSFKKKKKKI 1085
            F++EY +QPT S   G+   L GH+HLNK LL++  ISM ++ ++C++ I+S  +KKKK 
Sbjct: 924  FLVEYRKQPTISEIFGIDSCLHGHIHLNKTLLQDWNISMQDIHQKCEDVINSLGQKKKKK 983

Query: 1086 A----HALRFSISEHCSFHQWNGEESTDMPC----------------------------- 1145
            A         S+SE CSF    G + +DMPC                             
Sbjct: 984  ATDDFKRTSLSVSECCSFRDPCGSKGSDMPCLTFSYNATDPDLERTLDVLCNTVYPVLLE 1043

Query: 1146 -----DPRISSANVIWISPDSTSWQKNPSRWQDGELALDVCLEKSAVKQNGDAWRNVLDC 1205
                 D RI SAN+IW S D T+W +N    + GE  LDV +EKSAVKQ+GDAWR V+D 
Sbjct: 1044 IVIKGDSRICSANIIWNSSDMTTWIRNRHASRRGEWVLDVTVEKSAVKQSGDAWRVVIDS 1103

Query: 1206 CLPVMHLIDTSRSVPYAIKQVQELLGISCAFDQMIQRLSKSVSMVSKGVLGDHLILLANS 1265
            CL V+HLIDT RS+PY++KQVQELLG+SCAF+Q +QRLS SV MVSKGVL +H+ILLAN+
Sbjct: 1104 CLSVLHLIDTKRSIPYSVKQVQELLGLSCAFEQAVQRLSASVRMVSKGVLKEHIILLANN 1163

Query: 1266 MTCTGNMIGFNSSGYKALSRALSIQVPFTEATLFTPRKCFERAAEKCHKDSLSSIVASCS 1325
            MTC+G M+GFNS GYKAL+R+L+I+ PFTEATL  PRKCFE+AAEKCH DSLS++V SCS
Sbjct: 1164 MTCSGTMLGFNSGGYKALTRSLNIKAPFTEATLIAPRKCFEKAAEKCHTDSLSTVVGSCS 1223

Query: 1326 WGKHVAVGTGSRFDILWDQKELGCKQDEVVDVYNFLHMVRSGKSEESTSACLGEEIEDIM 1385
            WGK V VGTGS+F++LW+QKE G    E  DVY+FL MV S  + ++  +  G ++    
Sbjct: 1224 WGKRVDVGTGSQFELLWNQKETGLDDKEETDVYSFLQMVISTTNADAFVSSPGFDV---- 1283

Query: 1386 VEDEYGELALSPEPFSTSEKPVFEDSAEFEHCLD-NYPGESKWEKAPSLGAVSTGGGQWE 1445
             E+E  E A SPE  S   +P FEDSA+F++  D   P  + WEK+ S     +GG +W 
Sbjct: 1284 TEEEMAEWAESPERDSALGEPKFEDSADFQNLHDEGKPSGANWEKSSSWDNGCSGGSEWG 1343

Query: 1446 NNENGKATNSSDDNDWSGWGRKAEPDAAITNAPENISNSGWDTTPSWGNKATKTSNNNDW 1505
             +++               G +A P+            S W+       K T     + W
Sbjct: 1344 VSKS--------------TGGEANPE------------SNWE-------KTTNVEKEDAW 1403

Query: 1506 SNVGTKEVERDSITSMENTPKSGGWDTASTWGTKTKDVDSF---KGETAPEKSNSWSGLQ 1565
            S+  T++  ++S  S          D+   WG KTKD D+      ET+P   +S     
Sbjct: 1404 SSWNTRKDAQESSKS----------DSGGAWGIKTKDADADTTPNWETSPAPKDSIVPEN 1463

Query: 1566 NDKTETQDAF-HKKVEMASKSSGWEDKAWSRETSK------------TEDSWSSQVKDKA 1625
            N+   T D + HK V        W+ K W  E++             + D  +S+ +  A
Sbjct: 1464 NE--PTSDVWGHKSV----SDKSWDKKNWGTESAPAAWGSTDAAVWGSSDKKNSETESDA 1523

Query: 1626 ESFQVQVQEVSTKTNGWGSAEGWSKNSGDDHQSVAGWNDGQASMDREKVSDRWDSRATQR 1685
             ++  + +  S   +G G    W+K S +   + A W     +       + WD +  + 
Sbjct: 1524 AAWGSRDKNNSDVGSGAGVLGPWNKKSSETESNGATWGSSDKTKSGAAAWNSWDKKNIE- 1583

Query: 1686 MESQRTSSWGSPTVCDSKDSFSSKAMEHSDSIALNHSWDQQKSPEASQGFSNDVWGQQKS 1745
                  ++WGS            K  E     A   +WD++KS E   G +    G +K+
Sbjct: 1584 -TDSEPAAWGSQ---------GKKNSETESGPAAWGAWDKKKS-ETEPGPAGWGMGDKKN 1643

Query: 1746 REV-IKPSHVNNESNRHGWSSQIESHEGSGHGFDQVTSEHKSSDTGGWDSQEKMDKPWDK 1805
             E  + P+ + N      W  + +S   SG       +   S+D   W S +K     + 
Sbjct: 1644 SETELGPAAMGN------WDKK-KSDTKSG------PAAWGSTDAAAWGSSDK-----NN 1703

Query: 1806 QKSTQASESWGSQNDTQS----------SWGQPKKAPEEFSWGSQDDSNTQFSQLKPPET 1865
             ++   + +WGS+N   S          SWGQP    E+       D+N           
Sbjct: 1704 SETESDAAAWGSRNKKTSEIESGAGAWGSWGQPSPTAED------KDTN----------- 1763

Query: 1866 SLGWEQQKSPDVSHGWASHKESSEQTSSQGWDN--KKNQGSKGW-GGNAGEWKNRKNRPP 1925
                E  ++P VS      +E  ++  SQ W N  KK   S GW  G   +WK  +N  P
Sbjct: 1764 ----EDDRNPWVSLKETKSREKDDKERSQ-WGNPAKKFPSSGGWSNGGGADWKGNRNHTP 1823

Query: 1926 KSPGILNDDANVRGIYTASGQRLDMFTTEEQDILADIEPIMQSIRKVMHQSGYNDGDPLS 1985
            + P     + N+  ++TA+ QRLD FT+EEQ++L+D+EP+M+++RK+MH S Y DGDP+S
Sbjct: 1824 RPP---RSEDNLAPMFTATRQRLDSFTSEEQELLSDVEPVMRTLRKIMHPSAYPDGDPIS 1876

Query: 1986 AEDQSFVLESVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCFYVVTTDGHKEDFSYRKC 2034
             +D++FVLE + NFHP K  K+G+G+D   V +H+ F +SRCF+VV+TDG K+DFSYRK 
Sbjct: 1884 DDDKTFVLEKILNFHPQKETKLGSGVDFITVDKHTIFSDSRCFFVVSTDGAKQDFSYRKS 1876

BLAST of CmUC01G007470 vs. ExPASy Swiss-Prot
Match: Q9LQ02 (DNA-directed RNA polymerase IV subunit 1 OS=Arabidopsis thaliana OX=3702 GN=NRPD1 PE=1 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 1.8e-96
Identity = 343/1322 (25.95%), Postives = 565/1322 (42.74%), Query Frame = 0

Query: 143  SQLSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHITELKKMLSLLCLK 202
            +Q+++  LGLP     C +CG+ +   CEGHFG I     I +P  + E+  +L+ +C  
Sbjct: 40   NQVTDSRLGLPNPDSVCRTCGSKDRKVCEGHFGVINFAYSIINPYFLKEVAALLNKICPG 99

Query: 203  CLKMKKTKFP------------SKNIGFAERLLSSCCEDASQVSIREAKKPDG------- 262
            C  ++K +F             + N G+             +V+ +E  +  G       
Sbjct: 100  CKYIRKKQFQITEDQPERCRYCTLNTGYPLMKF--------RVTTKEVFRRSGIVVEVNE 159

Query: 263  ASYLQLKVPSRSSLREGFWDFLERYGFRYGDNL---TRTLLPCEVKEMLKKIPNETRKKL 322
             S ++LK     +L   +W FL +        L    R +   +V  +L  I     KK 
Sbjct: 160  ESLMKLKKRGVLTLPPDYWSFLPQDSNIDESCLKPTRRIITHAQVYALLLGIDQRLIKK- 219

Query: 323  AGRGYYPQDGYI-LQYLPVPPNCLSVPEI---SDGVTVMSSDPAVSMLKKILKQVEIIKG 382
                  P    + L   PV PN   V EI    +G  ++  D    + KK++        
Sbjct: 220  ----DIPMFNSLGLTSFPVTPNGYRVTEIVHQFNGARLI-FDERTRIYKKLV-------- 279

Query: 383  SRSGAPNFESHEVEANDLQLAVDQYLQV-RGTVKASRGIDARFGVNKELNDPSTKAWLEK 442
                   FE + +E +   +   QY ++   TV +S+  D+     K+ + P     L  
Sbjct: 280  ------GFEGNTLELSSRVMECMQYSRLFSETVSSSK--DSANPYQKKSDTPKL-CGLRF 339

Query: 443  MRTLFIRKGSGFSSRSVITGDAYKLVSEIGVPFEVAQRITFEERVSVHN-----IKYLQE 502
            M+ + + K S  + R+V+ GD    ++EIG+P  +A+R+   E ++  N       ++  
Sbjct: 340  MKDVLLGKRSDHTFRTVVVGDPSLKLNEIGIPESIAKRLQVSEHLNQCNKERLVTSFVPT 399

Query: 503  LVDKKLCLTYRDGSSAYSLREGSTGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQA 562
            L+D K  +  R G    +++        L+ G  + R +MDGD V +NRPP+ H+HSL A
Sbjct: 400  LLDNKE-MHVRRGDRLVAIQVND-----LQTGDKIFRSLMDGDTVLMNRPPSIHQHSLIA 459

Query: 563  LRV-YLHDDHTVKINPLICGPLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHS 622
            + V  L     V +NP+ C P   DFDGDC+H + PQSI AK E+  L +++KQL++  +
Sbjct: 460  MTVRILPTTSVVSLNPICCLPFRGDFDGDCLHGYVPQSIQAKVELDELVALDKQLINRQN 519

Query: 623  GNLNLQLANDSLLS--LKMMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVHSESL--HWT 682
            G   L L  DSL +  L  + +  +L +A  QQL M+    LPPPA++     S    WT
Sbjct: 520  GRNLLSLGQDSLTAAYLVNVEKNCYLNRAQMQQLQMYCPFQLPPPAIIKASPSSTEPQWT 579

Query: 683  ALQILQTVLPACFDCHG--DSYLIKNSDFLKFD----FERDAMPSLVNEILTSIFFQKGP 742
             +Q+   + P  FD     ++ ++ N + L F     + RD   + +  +L      KG 
Sbjct: 580  GMQLFGMLFPPGFDYTYPLNNVVVSNGELLSFSEGSAWLRDGEGNFIERLLK---HDKG- 639

Query: 743  EEVLRFFDSLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQKNIQVISPLLYQLR----- 802
             +VL    S Q +L + +   G SV L D    +     LQ    +   + Y LR     
Sbjct: 640  -KVLDIIYSAQEMLSQWLLMRGLSVSLAD----LYLSSDLQSRKNLTEEISYGLREAEQV 699

Query: 803  ----------------------------------------STFNELVELQLENHIRSVKV 862
                                                    +T +EL     ++  R V+ 
Sbjct: 700  CNKQQLMVESWRDFLAVNGEDKEEDSVSDLARFCYERQKSATLSELAVSAFKDAYRDVQA 759

Query: 863  PFTNFILKLSSLGKLFDSKSDSAINKVVQQIGFLGLQLSDKGKFY------SKTLIEDVA 922
                +  + +S   +  + S   I K+VQ    +GLQ S     +      +     D  
Sbjct: 760  LAYRYGDQSNSFLIMSKAGSKGNIGKLVQHSMCIGLQNSAVSLSFGFPRELTCAAWNDPN 819

Query: 923  SLFHNRYSSDKIDYPS-AEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTL 982
            S        D     S   +G+++  F  GL+P E  VHS+++R+     +  L  PGTL
Sbjct: 820  SPLRGAKGKDSTTTESYVPYGVIENSFLTGLNPLESFVHSVTSRDSSFSGNADL--PGTL 879

Query: 983  FKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGIKAGMMQPYSLFPPGEPVGVLAATAMS 1042
             + LM  +RD+   YDGTVRN   N ++Q  Y    G ++  +    GE +G L+A A+S
Sbjct: 880  SRRLMFFMRDIYAAYDGTVRNSFGNQLVQFTYETD-GPVEDIT----GEALGSLSACALS 939

Query: 1043 NPAYKA------VLDSTPSSNSSWDMMKEILLCKVSFKNEPIDRRVILYLNNCDCGRKYC 1102
              AY A      +L+++P  N     +K +L C    K    ++ + LYL+     +K+ 
Sbjct: 940  EAAYSALDQPISLLETSPLLN-----LKNVLEC--GSKKGQREQTMSLYLSEYLSKKKHG 999

Query: 1103 NENAAYVVKSHLKKVTLKDAAVDFMIEYN-RQPTPSGLGPGLVGHVHLNKMLLKELKISM 1162
             E  +  +K+HL+K++  +     MI ++    T   L P  V H H+++ +LK  ++S 
Sbjct: 1000 FEYGSLEIKNHLEKLSFSEIVSTSMIIFSPSSNTKVPLSP-WVCHFHISEKVLKRKQLSA 1059

Query: 1163 TEVLRRCQETISSFKKKKKKIAHALRFSISEHCSFHQWNGEEST---------------- 1222
              V+    E   S  ++ K     L    + HCS      ++                  
Sbjct: 1060 ESVVSSLNEQYKSRNRELKLDIVDLDIQNTNHCSSDDQAMKDDNVCITVTVVEASKHSVL 1119

Query: 1223 --------------DMPC--DPRISSANVIWISPDSTSWQKNPSRWQDGELALDVCLEKS 1282
                          D P   D  I   N++W   D     K       GEL L V +   
Sbjct: 1120 ELDAIRLVLIPFLLDSPVKGDQGIKKVNILW--TDRPKAPKRNGNHLAGELYLKVTMYGD 1179

Query: 1283 AVKQNGDAWRNVLDCCLPVMHLIDTSRSVPYAIKQVQELLGISCAFDQMIQRLSKSVSMV 1331
              K+N   W  +L+ CLP+M +ID  RS P  I+Q   + GI       +  L  +VS  
Sbjct: 1180 RGKRN--CWTALLETCLPIMDMIDWGRSHPDNIRQCCSVYGIDAGRSIFVANLESAVSDT 1239

BLAST of CmUC01G007470 vs. ExPASy Swiss-Prot
Match: P36594 (DNA-directed RNA polymerase II subunit rpb1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpb1 PE=1 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 3.2e-58
Identity = 221/843 (26.22%), Postives = 371/843 (44.01%), Query Frame = 0

Query: 145 LSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHITELKKMLSLLCLKCL 204
           L +P LG      KC++CG +    C GHFG+IEL  P++H   ++++KK+L  +C  C 
Sbjct: 55  LLDPRLGTIDRQFKCQTCGET-MADCPGHFGHIELAKPVFHIGFLSKIKKILECVCWNCG 114

Query: 205 KMK----KTKF-PSKNIGFAERLLSSCCEDASQVSIREAKKPDGASYLQLKVPSRSSLRE 264
           K+K      KF  ++     +  L++         + +     G+    L  PS +    
Sbjct: 115 KLKIDSSNPKFNDTQRYRDPKNRLNAVWNVCKTKMVCDTGLSAGSDNFDLSNPSANMGHG 174

Query: 265 GFW--------DFLERYG-FRYGDNLT-----RTLLPCEVKEMLKKIPNETRKKLA-GRG 324
           G          D L  +G ++ G + +     R L P EV  +   I +E    L     
Sbjct: 175 GCGAAQPTIRKDGLRLWGSWKRGKDESDLPEKRLLSPLEVHTIFTHISSEDLAHLGLNEQ 234

Query: 325 YYPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILK-QVEIIKGSRSGAPN 384
           Y   D  I+  LPVPP  +  P IS   T    D     L  I+K    + +  + GAP 
Sbjct: 235 YARPDWMIITVLPVPPPSVR-PSISVDGTSRGEDDLTHKLSDIIKANANVRRCEQEGAPA 294

Query: 385 FESHEVEANDLQLAVDQYL--QVRGTVKASRGIDARFGVNKELNDPSTKAWLEKMRTLFI 444
               E E   LQ  V  Y+  ++ G  +A +    + G   +      K    ++R   +
Sbjct: 295 HIVSEYE-QLLQFHVATYMDNEIAGQPQALQ----KSGRPLKSIRARLKGKEGRLRGNLM 354

Query: 445 RKGSGFSSRSVITGDAYKLVSEIGVPFEVAQRITFEERVSVHNIKYLQELV----DKKLC 504
            K   FS+R+VITGD    + E+GVP  +A+ +T+ E V+ +NI  LQELV    D+   
Sbjct: 355 GKRVDFSARTVITGDPNLSLDELGVPRSIAKTLTYPETVTPYNIYQLQELVRNGPDEHPG 414

Query: 505 LTY--RDGSSAYSLR-EGSTGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVY 564
             Y  RD      LR     G   L+ G  V R I DGD+V  NR P+ HK S+   R+ 
Sbjct: 415 AKYIIRDTGERIDLRYHKRAGDIPLRYGWRVERHIRDGDVVIFNRQPSLHKMSMMGHRIR 474

Query: 565 LHDDHTVKINPLICGPLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNL 624
           +    T ++N  +  P +ADFDGD +++  PQS   +AE+  +  V KQ++S  S    +
Sbjct: 475 VMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSEETRAEIQEITMVPKQIVSPQSNKPVM 534

Query: 625 QLANDSLLSL-KMMFRKYFLGKAAAQQLAMFVSSY---LPPPALLGVHSESLHWTALQIL 684
            +  D+L  + K   R  FL + A   + ++V  +   LPPP +L      + WT  QIL
Sbjct: 535 GIVQDTLAGVRKFSLRDNFLTRNAVMNIMLWVPDWDGILPPPVIL---KPKVLWTGKQIL 594

Query: 685 QTVLPACFDCHGD------------SYLIKNSDFLKFDFERDAMPSLVNEILTSIFFQKG 744
             ++P   +   D              LI+N + +    ++  + +    ++ +I+ +KG
Sbjct: 595 SLIIPKGINLIRDDDKQSLSNPTDSGMLIENGEIIYGVVDKKTVGASQGGLVHTIWKEKG 654

Query: 745 PEEVLRFFDSLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQKNIQVISPLLYQLRSTFN 804
           PE    FF+ +Q ++   +   GFS+G+ D       ++ + + ++       + R    
Sbjct: 655 PEICKGFFNGIQRVVNYWLLHNGFSIGIGDTIADADTMKEVTRTVK-------EARRQVA 714

Query: 805 ELVELQLENHIRSVKVPFTNFILKLS---SLGKLFDSKSDSA----------INKVVQQI 864
           E ++    N ++    P     L+ S    + ++ +   D+A           N V Q +
Sbjct: 715 ECIQDAQHNRLK----PEPGMTLRESFEAKVSRILNQARDNAGRSAEHSLKDSNNVKQMV 774

Query: 865 --GFLG--LQLSDKGKFYSKTLIEDVASLFHNRYSS----DKIDYPSAEFGLVKGCFFHG 921
             G  G  + +S       + ++E     F  +Y +     K D      G ++  +  G
Sbjct: 775 AAGSKGSFINISQMSACVGQQIVEGKRIPFGFKYRTLPHFPKDDDSPESRGFIENSYLRG 834

BLAST of CmUC01G007470 vs. ExPASy Swiss-Prot
Match: P18616 (DNA-directed RNA polymerase II subunit RPB1 OS=Arabidopsis thaliana OX=3702 GN=NRPB1 PE=1 SV=3)

HSP 1 Score: 202.6 bits (514), Expect = 4.3e-50
Identity = 215/873 (24.63%), Postives = 367/873 (42.04%), Query Frame = 0

Query: 145 LSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHITELKKMLSLLCLKCL 204
           LS+  LG      KCE+C  +   +C GHFGY+EL  P+YH   +  +  ++  +C  C 
Sbjct: 52  LSDTRLGTIDRKVKCETC-MANMAECPGHFGYLELAKPMYHVGFMKTVLSIMRCVCFNCS 111

Query: 205 KM------------KKTKFPSKNIGFAERLLSSC-----CEDASQVS----------IRE 264
           K+             K K P   +   +++L +C     C+    +           +++
Sbjct: 112 KILADEEEHKFKQAMKIKNPKNRL---KKILDACKNKTKCDGGDDIDDVQSHSTDEPVKK 171

Query: 265 AKKPDGASYLQLKVPSRSSLREGFWDFLERYGFRYGDNL------TRTLLPCEVKEMLKK 324
           ++   GA   +L +     + E     ++R      D L       +TL    V  +LK+
Sbjct: 172 SRGGCGAQQPKLTIEGMKMIAE---YKIQRKKNDEPDQLPEPAERKQTLGADRVLSVLKR 231

Query: 325 IPNETRKKLAGRGYYPQ----DGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKI 384
           I +   + L   G+ P+    D  IL+ LP+PP  +  P +    T  S D     L  I
Sbjct: 232 ISDADCQLL---GFNPKFARPDWMILEVLPIPPPPVR-PSVMMDATSRSEDDLTHQLAMI 291

Query: 385 LKQVEIIK-GSRSGAPNFESHEVEANDLQLAVDQYL------QVRGTVKASRGIDARFGV 444
           ++  E +K   ++GAP     E     LQ  +  Y       Q R T K+ R I +    
Sbjct: 292 IRHNENLKRQEKNGAPAHIISEF-TQLLQFHIATYFDNELPGQPRATQKSGRPIKSICS- 351

Query: 445 NKELNDPSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVSEIGVPFEVAQRITFEERV 504
                    KA   ++R   + K   FS+R+VIT D    + E+GVP+ +A  +T+ E V
Sbjct: 352 -------RLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETV 411

Query: 505 SVHNIKYLQELVD-------KKLCLTY--RDGSSAYSLRE-GSTGHTYLKPGQIVHRRIM 564
           + +NI+ L+ELVD        K    Y  RD      LR    +   +L+ G  V R + 
Sbjct: 412 TPYNIERLKELVDYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLQ 471

Query: 565 DGDIVFINRPPTTHKHSLQALRVYLHDDHTVKINPLICGPLSADFDGDCIHLFYPQSIAA 624
           DGD V  NR P+ HK S+   R+ +    T ++N  +  P +ADFDGD +++  PQS   
Sbjct: 472 DGDFVLFNRQPSLHKMSIMGHRIRIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFET 531

Query: 625 KAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSL-KMMFRKYFLGKAAAQQLAMFVSSY- 684
           +AEVL L  V K ++S  +    + +  D+LL   K+  R  F+ K       M+   + 
Sbjct: 532 RAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFD 591

Query: 685 --LPPPALLGVHSESLHWTALQILQTVLP----------------ACFDCHGDSYL-IKN 744
             +P PA+L        WT  Q+   ++P                  F   GD+ + I+ 
Sbjct: 592 GKVPAPAIL---KPRPLWTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIER 651

Query: 745 SDFLKFDFERDAMPSLVNEILTSIFFQKGPEEVLRFFDSLQPLLMEHIFSEGFSVGLDDY 804
            + L     +  + +    ++  I+ + GP+   +F    Q L+   +   GF++G+ D 
Sbjct: 652 GELLAGTLCKKTLGTSNGSLVHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFTIGIGDT 711

Query: 805 SMPMAFLQALQKNIQ----VISPLLYQ-------------LRSTFNELVELQLENHIRSV 864
               + ++ + + I      +  L+ Q             +R TF   V   L       
Sbjct: 712 IADSSTMEKINETISNAKTAVKDLIRQFQGKELDPEPGRTMRDTFENRVNQVLNKARDDA 771

Query: 865 KVPFTNFILKLSSLGKLFDSKSDSAINKVVQQIGFLGLQLSDKGK-----FYSKTLIEDV 921
                  + + ++L  +  + S  +   + Q    +G Q + +GK     F  +TL    
Sbjct: 772 GSSAQKSLAETNNLKAMVTAGSKGSFINISQMTACVG-QQNVEGKRIPFGFDGRTL---- 831

BLAST of CmUC01G007470 vs. ExPASy Swiss-Prot
Match: P04052 (DNA-directed RNA polymerase II subunit RPB1 OS=Drosophila melanogaster OX=7227 GN=RpII215 PE=3 SV=4)

HSP 1 Score: 199.5 bits (506), Expect = 3.6e-49
Identity = 208/858 (24.24%), Postives = 354/858 (41.26%), Query Frame = 0

Query: 145 LSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHITELKKMLSLLCLKCL 204
           L +P  G+     +C++C      +C GHFG+I+L  P++H   IT+  K+L  +C  C 
Sbjct: 53  LMDPRQGVIDRTSRCQTC-AGNMTECPGHFGHIDLAKPVFHIGFITKTIKILRCVCFYCS 112

Query: 205 K--------------MKKTKFPSKNIGFAERLL--SSCCEDASQVSI-REAKKPD----- 264
           K              MK    P K + +   L    + CE    + + +E ++PD     
Sbjct: 113 KMLVSPHNPKIKEIVMKSRGQPRKRLAYVYDLCKGKTICEGGEDMDLTKENQQPDPNKKP 172

Query: 265 ---GASYLQLKVPSRSSLREGFWDFLERYGFRYGDNLTRTLLPC--EVKEMLKKIPNETR 324
              G  + Q       S+R    D    +  +  D+  + ++     V E+LK I +E  
Sbjct: 173 GHGGCGHYQ------PSIRRTGLDLTAEWKHQNEDSQEKKIVVSAERVWEILKHITDEEC 232

Query: 325 KKLAGRGYYPQ-DGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEIIKG 384
             L     Y + D  I+  LPVPP  +    +  G      D    +   I    E+ K 
Sbjct: 233 FILGMDPKYARPDWMIVTVLPVPPLAVRPAVVMFGAAKNQDDLTHKLSDIIKANNELRKN 292

Query: 385 SRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKAWLEKM 444
             SGA    +H ++ N   L       V   +        + G   +      K    ++
Sbjct: 293 EASGA---AAHVIQENIKMLQFHVATLVDNDMPGMPRAMQKSGKPLKAIKARLKGKEGRI 352

Query: 445 RTLFIRKGSGFSSRSVITGDAYKLVSEIGVPFEVAQRITFEERVSVHNIKYLQELVDK-- 504
           R   + K   FS+R+VIT D    + ++GVP  +AQ +TF E V+  NI  +QELV +  
Sbjct: 353 RGNLMGKRVDFSARTVITPDPNLRIDQVGVPRSIAQNLTFPELVTPFNIDRMQELVRRGN 412

Query: 505 ----KLCLTYRDGSSAYSLR-EGSTGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQ 564
                     RD      LR    +   +L+ G  V R + D D+V  NR PT HK S+ 
Sbjct: 413 SQYPGAKYIVRDNGERIDLRFHPKSSDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMM 472

Query: 565 ALRVYLHDDHTVKINPLICGPLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHS 624
             RV +    T ++N     P +ADFDGD ++L  PQS+  +AEV  +    +Q+++  +
Sbjct: 473 GHRVKVLPWSTFRMNLSCTSPYNADFDGDEMNLHVPQSMETRAEVENIHITPRQIITPQA 532

Query: 625 GNLNLQLANDSLLSL-KMMFRKYFLGKAAAQQLAMFVSSY---LPPPALLGVHSESLHWT 684
               + +  D+L ++ KM  R  F+ +     L MF+ ++   +P P +L        WT
Sbjct: 533 NKPVMGIVQDTLTAVRKMTKRDVFITREQVMNLLMFLPTWDAKMPQPCIL---KPRPLWT 592

Query: 685 ALQILQTVLPA------CFDCHGD---------------SYLIKNSDFLKFDFERDAMPS 744
             QI   ++P           H D                 ++++ + +     + ++ +
Sbjct: 593 GKQIFSLIIPGNVNMIRTHSTHPDEEDEGPYKWISPGDTKVMVEHGELIMGILCKKSLGT 652

Query: 745 LVNEILTSIFFQKGPEEVLRFFDSLQPLLMEHIFSEGFSVGL-DDYSMPMAF---LQALQ 804
               +L   F + G +   RF+ ++Q ++   +  EG S+G+ D  + P  +    QA++
Sbjct: 653 SAGSLLHICFLELGHDIAGRFYGNIQTVINNWLLFEGHSIGIGDTIADPQTYNEIQQAIK 712

Query: 805 K-------------NIQVISPLLYQLRSTFNELVELQLENHIRSVKVPFTNFILKLSSLG 864
           K             N+++       LR TF   V   L +            + + ++L 
Sbjct: 713 KAKDDVINVIQKAHNMELEPTPGNTLRQTFENKVNRILNDARDKTGGSAKKSLTEYNNLK 772

Query: 865 KLFDSKSDSAINKVVQQIGFLGLQLSDKGK-----FYSKTLIEDVASLFHNRYSSDKIDY 921
            +  S S  +   + Q I  +G Q + +GK     F  +TL   +           K DY
Sbjct: 773 AMVVSGSKGSNINISQVIACVG-QQNVEGKRIPYGFRKRTLPHFI-----------KDDY 832

BLAST of CmUC01G007470 vs. ExPASy TrEMBL
Match: A0A1S3CPU1 (DNA-directed RNA polymerase subunit OS=Cucumis melo OX=3656 GN=LOC103503449 PE=3 SV=1)

HSP 1 Score: 3550.4 bits (9205), Expect = 0.0e+00
Identity = 1767/1939 (91.13%), Postives = 1831/1939 (94.43%), Query Frame = 0

Query: 130  CIAAISDCPITHASQLSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHI 189
            CIAAISDCPITHASQLSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHI
Sbjct: 29   CIAAISDCPITHASQLSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHI 88

Query: 190  TELKKMLSLLCLKCLKMKKTKFPSKNIGFAERLLSSCCEDASQVSIREAKKPDGASYLQL 249
            TEL+KMLSLLCLKCLKMKKTKFPSKNIGFAERLLSSCCEDASQV+IREAKK DGASYLQL
Sbjct: 89   TELRKMLSLLCLKCLKMKKTKFPSKNIGFAERLLSSCCEDASQVTIREAKKADGASYLQL 148

Query: 250  KVPSRSSLREGFWDFLERYGFRYGDNLTRTLLPCEVKEMLKKIPNETRKKLAGRGYYPQD 309
            KVPSR+SL+E FWDFLERYGFRYGDN TRTLLPCEVKEMLKKIPNETRKKLAGRGYYPQD
Sbjct: 149  KVPSRTSLQERFWDFLERYGFRYGDNFTRTLLPCEVKEMLKKIPNETRKKLAGRGYYPQD 208

Query: 310  GYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEIIKGSRSGAPNFESHEV 369
            GYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEIIKGSRSGAPNFESHEV
Sbjct: 209  GYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEIIKGSRSGAPNFESHEV 268

Query: 370  EANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKAWLEKMRTLFIRKGSGFSS 429
            EANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKAWLEKMRTLFIRKGSGFSS
Sbjct: 269  EANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKAWLEKMRTLFIRKGSGFSS 328

Query: 430  RSVITGDAYKLVSEIGVPFEVAQRITFEERVSVHNIKYLQELVDKKLCLTYRDGSSAYSL 489
            RSVITGDAYKLV+EIGVPFEVAQRITFEERVSVHNI+YLQELVDKKLCLTYRDGSSAYSL
Sbjct: 329  RSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRYLQELVDKKLCLTYRDGSSAYSL 388

Query: 490  REGSTGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHTVKINPLICG 549
            REGS GHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDH VKINPLICG
Sbjct: 389  REGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHVVKINPLICG 448

Query: 550  PLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFR 609
             LSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFR
Sbjct: 449  SLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFR 508

Query: 610  KYFLGKAAAQQLAMFVSSYLPPPALLGVHSESLHWTALQILQTVLPACFDCHGDSYLIKN 669
            KYFLGKAAAQQLAMFVSSYLPPPALLGV S SLHWTALQILQTVLPACFDCHGDSYLIKN
Sbjct: 509  KYFLGKAAAQQLAMFVSSYLPPPALLGVRSGSLHWTALQILQTVLPACFDCHGDSYLIKN 568

Query: 670  SDFLKFDFERDAMPSLVNEILTSIFFQKGPEEVLRFFDSLQPLLMEHIFSEGFSVGLDDY 729
            S+FLKFDF++DAMPSL+NEILTSIFFQKGPEEVL+FFDSLQPLLMEHIFSEGFSVGLDDY
Sbjct: 569  SNFLKFDFDKDAMPSLINEILTSIFFQKGPEEVLKFFDSLQPLLMEHIFSEGFSVGLDDY 628

Query: 730  SMPMAFLQALQKNIQVISPLLYQLRSTFNELVELQLENHIRSVKVPFTNFILKLSSLGKL 789
            SMPMAFLQALQKNIQV+SPLLYQLRSTFNELVELQLENH+RSVKVPFTNFILKLSSLGKL
Sbjct: 629  SMPMAFLQALQKNIQVLSPLLYQLRSTFNELVELQLENHLRSVKVPFTNFILKLSSLGKL 688

Query: 790  FDSKSDSAINKVVQQIGFLGLQLSDKGKFYSKTLIEDVASLFHNRYSSDKIDYPSAEFGL 849
            FDSKS+SAINKVVQQIGFLGLQLSDKG+FYSK+LIEDVASLFHNRYSSDKIDYPSAEFGL
Sbjct: 689  FDSKSESAINKVVQQIGFLGLQLSDKGRFYSKSLIEDVASLFHNRYSSDKIDYPSAEFGL 748

Query: 850  VKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNV 909
            VKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNV
Sbjct: 749  VKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNV 808

Query: 910  CSNSIIQLEYGIKAGMMQPYSLFPPGEPVGVLAATAMSNPAYKAVLDSTPSSNSSWDMMK 969
            CSNSIIQLEYG+KAGMMQPYSLFPPGEPVGVLAATAMS PAYKAVLDSTPSSNSSWDMMK
Sbjct: 809  CSNSIIQLEYGMKAGMMQPYSLFPPGEPVGVLAATAMSTPAYKAVLDSTPSSNSSWDMMK 868

Query: 970  EILLCKVSFKNEPIDRRVILYLNNCDCGRKYCNENAAYVVKSHLKKVTLKDAAVDFMIEY 1029
            EILLCKVSFKNEPIDRRVILYLNNC CGRKYCNENAAYVVKSHLKKVTLKD AVDFMIEY
Sbjct: 869  EILLCKVSFKNEPIDRRVILYLNNCACGRKYCNENAAYVVKSHLKKVTLKDVAVDFMIEY 928

Query: 1030 NRQPTPSGLGPGLVGHVHLNKMLLKELKISMTEVLRRCQETISSFKKKKKKIAHALRFSI 1089
            NRQPTPSGLGPGLVGHVHLN+MLLKEL I+MTEVLRRCQET+SSFKKKKKK+AHALRF+I
Sbjct: 929  NRQPTPSGLGPGLVGHVHLNRMLLKELNINMTEVLRRCQETMSSFKKKKKKVAHALRFAI 988

Query: 1090 SEHCSFHQWNGEESTDMPC----------------------------------DPRISSA 1149
            SEHC+FHQWNG ES DMPC                                  DPRI SA
Sbjct: 989  SEHCAFHQWNGVESIDMPCLIFWHETRDVHLERTAHILADIVFPLLSETIIKGDPRIKSA 1048

Query: 1150 NVIWISPDSTSWQKNPSRWQDGELALDVCLEKSAVKQNGDAWRNVLDCCLPVMHLIDTSR 1209
            +VIWISPDSTSWQKNPSRWQDGELALDVCLEKSA+KQNGDAWRNVLDCCLPV+HLIDT R
Sbjct: 1049 SVIWISPDSTSWQKNPSRWQDGELALDVCLEKSALKQNGDAWRNVLDCCLPVLHLIDTRR 1108

Query: 1210 SVPYAIKQVQELLGISCAFDQMIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNS 1269
            SVPYAIKQVQELLGISCAFDQMIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNS
Sbjct: 1109 SVPYAIKQVQELLGISCAFDQMIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNS 1168

Query: 1270 SGYKALSRALSIQVPFTEATLFTPRKCFERAAEKCHKDSLSSIVASCSWGKHVAVGTGSR 1329
             GYKALSRAL+IQVPFTEATLFTPRKCFE+AAEKCHKDSLSSIVASCSWGKHVAVGTGSR
Sbjct: 1169 GGYKALSRALNIQVPFTEATLFTPRKCFEKAAEKCHKDSLSSIVASCSWGKHVAVGTGSR 1228

Query: 1330 FDILWDQKELGCKQDEVVDVYNFLHMVRSGKSEESTSACLGEEIEDIMVEDEYGELALSP 1389
            FDILWDQKELGCKQD+VVDVYNFLHMVRSGKSEE TSACLGEE+EDIMVEDEYGEL LSP
Sbjct: 1229 FDILWDQKELGCKQDDVVDVYNFLHMVRSGKSEEPTSACLGEEVEDIMVEDEYGELTLSP 1288

Query: 1390 EPFSTSEKPVFEDSAEFEHCLDNYPGESKWEKAPSLGAVSTGGGQWENNENGKATNSSDD 1449
            EPFSTSEKPVFEDSAEFEHCLDN PGESKWEKAPSLGAVSTGGGQWE+N NGKAT SSDD
Sbjct: 1289 EPFSTSEKPVFEDSAEFEHCLDNDPGESKWEKAPSLGAVSTGGGQWESNGNGKATKSSDD 1348

Query: 1450 NDWSGWGRKAEPDAAITNAPENISNSGWDTTPSWGNKATKTSNNNDWSNVGTKEVERDSI 1509
            NDWSGWGRKAEPD  +TNA EN SNS WDTT SWGNKAT TSN+NDWSN  TKEVERDS 
Sbjct: 1349 NDWSGWGRKAEPDVTVTNAQENTSNSAWDTTSSWGNKATITSNDNDWSNCSTKEVERDSF 1408

Query: 1510 TSMENTPKSGGWDTASTWGTKTKDVDSFKGETAPEKSNSWSGLQNDKTETQDAFHKKVEM 1569
            TSME TPKSGGWDTASTWGTKTKD DSF GETAPEKSN WS LQ DK ETQDAFHKK EM
Sbjct: 1409 TSMEKTPKSGGWDTASTWGTKTKD-DSFNGETAPEKSNQWSSLQKDKAETQDAFHKKAEM 1468

Query: 1570 ASKSSGWEDKAWSRETSKTEDSWSSQVKDKAESFQVQVQEVSTKTNGWGSAEGWSKNSGD 1629
            ASKSSGWEDKAWSR TSKTED+WS QVKDKAESFQV VQ+VS+KTNGWGS  GW+KNSG 
Sbjct: 1469 ASKSSGWEDKAWSRGTSKTEDNWSGQVKDKAESFQVPVQKVSSKTNGWGSTGGWTKNSGG 1528

Query: 1630 DHQSVAGWNDGQASMDREKVSDRWDSRATQRMESQRTSSWGSPTVCDSKDSFSSKAMEHS 1689
            DHQ+ AGWNDGQASMDRE+ SDRWD +ATQ++ES +TSSWGSPTVCDSKDSF SKA++H 
Sbjct: 1529 DHQAEAGWNDGQASMDREEASDRWDRKATQKLESHQTSSWGSPTVCDSKDSFPSKAVDHG 1588

Query: 1690 DSIALNHSWDQQKSPEASQGFSNDVWGQQKSREVIKPSHVNNESNRHGWSSQIESHEGSG 1749
            DS+ +NHSWD+QKSPEASQGF ND W QQKS++VIKPSH NNESNR GW SQIES+EGS 
Sbjct: 1589 DSV-VNHSWDRQKSPEASQGFGNDAWQQQKSQDVIKPSHANNESNRSGWGSQIESNEGSD 1648

Query: 1750 HGFDQVTSEHKSSDTGGWDSQEKMDKPWDKQKSTQASESWGSQNDTQSSWGQPKKAPEEF 1809
            HGFDQVTSE KSSDT GWDSQEKMDKPWDKQKS +AS+SWGSQND+  SWGQP++A EEF
Sbjct: 1649 HGFDQVTSEQKSSDTRGWDSQEKMDKPWDKQKSLEASQSWGSQNDSLGSWGQPQRASEEF 1708

Query: 1810 SWGSQDDSNTQFSQLKPPETSLGWEQQKSPDVSHGWASHKESSEQTSSQGWDNKKNQGSK 1869
            S GSQDDS+TQFSQLKPPETSLGWEQQKSP+VSHGW SHKESSEQTSS GWD KKNQGSK
Sbjct: 1709 SRGSQDDSSTQFSQLKPPETSLGWEQQKSPEVSHGWGSHKESSEQTSSHGWD-KKNQGSK 1768

Query: 1870 GWGGNAGEWKNRKNRPPKSPGILNDDANVRGIYTASGQRLDMFTTEEQDILADIEPIMQS 1929
            GWGGNAGEWKNRKNRPPKSPG+ +DDAN+R +YTASGQRLDMFTTEEQDILADIEPIMQS
Sbjct: 1769 GWGGNAGEWKNRKNRPPKSPGMSSDDANLRALYTASGQRLDMFTTEEQDILADIEPIMQS 1828

Query: 1930 IRKVMHQSGYNDGDPLSAEDQSFVLESVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCF 1989
            IRKVMHQSGYNDGDPLSAEDQSFVL+SVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCF
Sbjct: 1829 IRKVMHQSGYNDGDPLSAEDQSFVLQSVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCF 1888

Query: 1990 YVVTTDGHKEDFSYRKCLDNFIKGKYPDMAEMFVAKYFRKPRPNRNRDRNSASEENENKN 2035
            YVVTTDGHKEDFSYRKCLDNFIKGKYPDMAEMFVAKYFRKPRPNRNRDRN ASEENENK+
Sbjct: 1889 YVVTTDGHKEDFSYRKCLDNFIKGKYPDMAEMFVAKYFRKPRPNRNRDRNPASEENENKS 1948

BLAST of CmUC01G007470 vs. ExPASy TrEMBL
Match: A0A0A0KN85 (DNA-directed RNA polymerase subunit OS=Cucumis sativus OX=3659 GN=Csa_5G435050 PE=3 SV=1)

HSP 1 Score: 3548.8 bits (9201), Expect = 0.0e+00
Identity = 1771/1939 (91.34%), Postives = 1833/1939 (94.53%), Query Frame = 0

Query: 130  CIAAISDCPITHASQLSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHI 189
            CIAAISDCPITHASQLSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHI
Sbjct: 29   CIAAISDCPITHASQLSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHI 88

Query: 190  TELKKMLSLLCLKCLKMKKTKFPSKNIGFAERLLSSCCEDASQVSIREAKKPDGASYLQL 249
            TELKKMLSLLCLKCLKMKKTKFPSKNIGFAERLLSSCCEDASQV+IREAKK DGASYLQL
Sbjct: 89   TELKKMLSLLCLKCLKMKKTKFPSKNIGFAERLLSSCCEDASQVTIREAKKADGASYLQL 148

Query: 250  KVPSRSSLREGFWDFLERYGFRYGDNLTRTLLPCEVKEMLKKIPNETRKKLAGRGYYPQD 309
            KVPSR+SL+E FWDFLERYGFRYGDN TRTLLPCEVKEMLKKIPNETRKKLAGRGYYPQD
Sbjct: 149  KVPSRTSLQERFWDFLERYGFRYGDNFTRTLLPCEVKEMLKKIPNETRKKLAGRGYYPQD 208

Query: 310  GYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEIIKGSRSGAPNFESHEV 369
            GYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEIIKGSRSGAPNFESHEV
Sbjct: 209  GYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEIIKGSRSGAPNFESHEV 268

Query: 370  EANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKAWLEKMRTLFIRKGSGFSS 429
            EANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKAWLEKMRTLFIRKGSGFSS
Sbjct: 269  EANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKAWLEKMRTLFIRKGSGFSS 328

Query: 430  RSVITGDAYKLVSEIGVPFEVAQRITFEERVSVHNIKYLQELVDKKLCLTYRDGSSAYSL 489
            RSVITGDAYKLV+EIGVPFEVAQRITFEERVSVHNI+YLQELVDKKLCLTYRDGSSAYSL
Sbjct: 329  RSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIRYLQELVDKKLCLTYRDGSSAYSL 388

Query: 490  REGSTGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHTVKINPLICG 549
            REGS GHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDH VKINPLICG
Sbjct: 389  REGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHVVKINPLICG 448

Query: 550  PLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFR 609
            PLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFR
Sbjct: 449  PLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFR 508

Query: 610  KYFLGKAAAQQLAMFVSSYLPPPALLGVHSESLHWTALQILQTVLPACFDCHGDSYLIKN 669
            KYFLGKAAAQQLAMFVSSYLPPPALLGV S SLHWTALQILQTVLPA FDCHGDSYLIKN
Sbjct: 509  KYFLGKAAAQQLAMFVSSYLPPPALLGVRSGSLHWTALQILQTVLPASFDCHGDSYLIKN 568

Query: 670  SDFLKFDFERDAMPSLVNEILTSIFFQKGPEEVLRFFDSLQPLLMEHIFSEGFSVGLDDY 729
            S+FLKFDF+RDAMPSL+NEILTSIFFQKGPEEVL+FFDSLQPLLMEHIFSEGFSVGLDDY
Sbjct: 569  SNFLKFDFDRDAMPSLINEILTSIFFQKGPEEVLKFFDSLQPLLMEHIFSEGFSVGLDDY 628

Query: 730  SMPMAFLQALQKNIQVISPLLYQLRSTFNELVELQLENHIRSVKVPFTNFILKLSSLGKL 789
            SMPMAFLQALQKNIQV+SPLLYQLRSTFNELVELQLENH+RSVKVPFTNFILKLSSLGKL
Sbjct: 629  SMPMAFLQALQKNIQVLSPLLYQLRSTFNELVELQLENHLRSVKVPFTNFILKLSSLGKL 688

Query: 790  FDSKSDSAINKVVQQIGFLGLQLSDKGKFYSKTLIEDVASLFHNRYSSDKIDYPSAEFGL 849
            FDSKS+SAINKVVQQIGFLGLQLSDKG+FYSK+LIEDVASLFHNRYSSDKIDYPSAEFGL
Sbjct: 689  FDSKSESAINKVVQQIGFLGLQLSDKGRFYSKSLIEDVASLFHNRYSSDKIDYPSAEFGL 748

Query: 850  VKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNV 909
            VKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNV
Sbjct: 749  VKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNV 808

Query: 910  CSNSIIQLEYGIKAGMMQPYSLFPPGEPVGVLAATAMSNPAYKAVLDSTPSSNSSWDMMK 969
            CSNSIIQLEYG+KAGMMQPYSLFPPGEPVGVLAATAMS PAYKAVLDSTPSSNSSWDMMK
Sbjct: 809  CSNSIIQLEYGMKAGMMQPYSLFPPGEPVGVLAATAMSTPAYKAVLDSTPSSNSSWDMMK 868

Query: 970  EILLCKVSFKNEPIDRRVILYLNNCDCGRKYCNENAAYVVKSHLKKVTLKDAAVDFMIEY 1029
            EILLCKVSFKNEPIDRRVILYLNNC CGRKYCNENAAYVVKSHLKKVTLKDAA+DFMIEY
Sbjct: 869  EILLCKVSFKNEPIDRRVILYLNNCACGRKYCNENAAYVVKSHLKKVTLKDAAMDFMIEY 928

Query: 1030 NRQPTPSGLGPGLVGHVHLNKMLLKELKISMTEVLRRCQETISSFKKKKKKIAHALRFSI 1089
            NRQPTPSGLGPGLVGHVHLN+MLLKEL I MTEVLRRCQET+SSFKKKKKKIAHALRFSI
Sbjct: 929  NRQPTPSGLGPGLVGHVHLNRMLLKELNIDMTEVLRRCQETMSSFKKKKKKIAHALRFSI 988

Query: 1090 SEHCSFHQWNGEESTDMPC----------------------------------DPRISSA 1149
            SEHC+FHQWNGEES DMPC                                  DPRI SA
Sbjct: 989  SEHCAFHQWNGEESIDMPCLIFWHQTRDVHLERTAHILADIVFPLLSETIIKGDPRIKSA 1048

Query: 1150 NVIWISPDSTSWQKNPSRWQDGELALDVCLEKSAVKQNGDAWRNVLDCCLPVMHLIDTSR 1209
            +VIWISPDSTSWQKNPSRWQDGELALDVCLEKSAVKQNGDAWRNVLDCCLPV+HLIDT R
Sbjct: 1049 SVIWISPDSTSWQKNPSRWQDGELALDVCLEKSAVKQNGDAWRNVLDCCLPVLHLIDTRR 1108

Query: 1210 SVPYAIKQVQELLGISCAFDQMIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNS 1269
            SVPYAIKQVQELLGISCAFDQMIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNS
Sbjct: 1109 SVPYAIKQVQELLGISCAFDQMIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNS 1168

Query: 1270 SGYKALSRALSIQVPFTEATLFTPRKCFERAAEKCHKDSLSSIVASCSWGKHVAVGTGSR 1329
             GYKALSRAL+IQVPFTEATLFTPRKCFE+AAEKCHKDSLSSIVASCSWGKHVAVGTGSR
Sbjct: 1169 GGYKALSRALNIQVPFTEATLFTPRKCFEKAAEKCHKDSLSSIVASCSWGKHVAVGTGSR 1228

Query: 1330 FDILWDQKELGCKQDEVVDVYNFLHMVRSGKSEESTSACLGEEIEDIMVEDEYGELALSP 1389
            FDILWDQKELGCKQD+VVDVYNFLHMVRSGKSEE TSACLGEEIEDIMVEDEYGEL LSP
Sbjct: 1229 FDILWDQKELGCKQDDVVDVYNFLHMVRSGKSEEPTSACLGEEIEDIMVEDEYGELTLSP 1288

Query: 1390 EPFSTSEKPVFEDSAEFEHCLDNYPGESKWEKAPSLGAVSTGGGQWENNENGKATNSSDD 1449
            EPFSTSEKPVFEDSAEFEHCLDNYPGESKWEKAPSLGAVSTGGGQWE+NENGKATNSSD 
Sbjct: 1289 EPFSTSEKPVFEDSAEFEHCLDNYPGESKWEKAPSLGAVSTGGGQWESNENGKATNSSDG 1348

Query: 1450 NDWSGWGRKAEPDAAITNAPENISNSGWDTTPSWGNKATKTSNNNDWSNVGTKEVERDSI 1509
            NDWSGWGRKAEPD  +TNA EN SNS WDTT SWGNKAT +SN+NDWSN  TKEVERDS 
Sbjct: 1349 NDWSGWGRKAEPDVTVTNAQENTSNSAWDTTSSWGNKATNSSNDNDWSNCSTKEVERDSF 1408

Query: 1510 TSMENTPKSGGWDTASTWGTKTKDVDSFKGETAPEKSNSWSGLQNDKTETQDAFHKKVEM 1569
            TSME TPKSGGWD+ASTWGTKTKD DSFK ETAP+KS+ WSGLQ DK ETQDAFHKK EM
Sbjct: 1409 TSMEKTPKSGGWDSASTWGTKTKD-DSFKRETAPKKSSQWSGLQKDKAETQDAFHKKAEM 1468

Query: 1570 ASKSSGWEDKAWSRETSKTEDSWSSQVKDKAESFQVQVQEVSTKTNGWGSAEGWSKNSGD 1629
            ASKS GWEDKAWSR TSKTED+WSSQVKDKAESFQVQVQEVS+KTNGWGS  GW+KNSG 
Sbjct: 1469 ASKSGGWEDKAWSRGTSKTEDNWSSQVKDKAESFQVQVQEVSSKTNGWGSTGGWTKNSGG 1528

Query: 1630 DHQSVAGWNDGQASMDREKVSDRWDSRATQRMESQRTSSWGSPTVCDSKDSFSSKAMEHS 1689
            DHQS AGWNDGQASMDREKVSDRWD +ATQ++ES +TSSWGSPTV DSKDSF SKA++HS
Sbjct: 1529 DHQSEAGWNDGQASMDREKVSDRWDRKATQKLESHQTSSWGSPTVGDSKDSFPSKAVDHS 1588

Query: 1690 DSIALNHSWDQQKSPEASQGFSNDVWGQQKSREVIKPSHVNNESNRHGWSSQIESHEGSG 1749
            DS+ +NHSWD+QKSPEASQGF ND WGQQKSR+VIKPS  NNESN  GW SQIES+EGS 
Sbjct: 1589 DSV-VNHSWDRQKSPEASQGFGNDAWGQQKSRDVIKPSLANNESNLSGWGSQIESNEGSD 1648

Query: 1750 HGFDQVTSEHKSSDTGGWDSQEKMDKPWDKQKSTQASESWGSQNDTQSSWGQPKKAPEEF 1809
            HGFDQVT+E KSSDT GWDSQEK DKPWDKQKS +AS+SWGSQND+  SWGQP++A EE 
Sbjct: 1649 HGFDQVTNEQKSSDTRGWDSQEKTDKPWDKQKSLEASQSWGSQNDSLGSWGQPQRASEEC 1708

Query: 1810 SWGSQDDSNTQFSQLKPPETSLGWEQQKSPDVSHGWASHKESSEQTSSQGWDNKKNQGSK 1869
            S  SQDDS+TQFSQLKPPETSLGWEQQKSP+VSHGW S+KESSEQTSS GWD KKNQGSK
Sbjct: 1709 SRESQDDSSTQFSQLKPPETSLGWEQQKSPEVSHGWGSNKESSEQTSSHGWD-KKNQGSK 1768

Query: 1870 GWGGNAGEWKNRKNRPPKSPGILNDDANVRGIYTASGQRLDMFTTEEQDILADIEPIMQS 1929
            GWGGNAGEWKNRKNRPPKSPG+ NDDAN+R +YTASGQRLDMFT+EEQDILADIEPIMQS
Sbjct: 1769 GWGGNAGEWKNRKNRPPKSPGMSNDDANLRALYTASGQRLDMFTSEEQDILADIEPIMQS 1828

Query: 1930 IRKVMHQSGYNDGDPLSAEDQSFVLESVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCF 1989
            IRKVMHQSGYNDGDPLSAEDQSFVL+SVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCF
Sbjct: 1829 IRKVMHQSGYNDGDPLSAEDQSFVLQSVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCF 1888

Query: 1990 YVVTTDGHKEDFSYRKCLDNFIKGKYPDMAEMFVAKYFRKPRPNRNRDRNSASEENENKN 2035
            YVVTTDGHKEDFSYRKCLDNFIKGKYPD+AEMFVAKYFRKPRPNRNRDRN ASEENENK+
Sbjct: 1889 YVVTTDGHKEDFSYRKCLDNFIKGKYPDLAEMFVAKYFRKPRPNRNRDRNPASEENENKS 1948

BLAST of CmUC01G007470 vs. ExPASy TrEMBL
Match: A0A6J1GP51 (DNA-directed RNA polymerase subunit OS=Cucurbita moschata OX=3662 GN=LOC111456230 PE=3 SV=1)

HSP 1 Score: 3285.4 bits (8517), Expect = 0.0e+00
Identity = 1660/1997 (83.12%), Postives = 1757/1997 (87.98%), Query Frame = 0

Query: 130  CIAAISDCPITHASQLSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHI 189
            CIAAISDCPITHASQLSNPFLGLPIE+GKCESCGTSEPGKCEGHFGYIELPIPIYHPNHI
Sbjct: 29   CIAAISDCPITHASQLSNPFLGLPIEYGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHI 88

Query: 190  TELKKMLSLLCLKCLKMKKTKFPSKNIGFAERLLSSCCEDASQVSIREAKKPDGASYLQL 249
            TELKKMLSLLCLKCLKMKK KFPSKN+GFAERLL SCCEDASQVSIREAKK DGA+YLQL
Sbjct: 89   TELKKMLSLLCLKCLKMKKNKFPSKNVGFAERLL-SCCEDASQVSIREAKKSDGATYLQL 148

Query: 250  KVPSRSSLREGFWDFLERYGFRYGDNLTRTLLPCEVKEMLKKIPNETRKKLAGRGYYPQD 309
            KVPSR+SLREGFWDFLERYGFRYGDNLTRTLLPCEVKEMLKKIPNETRKKLAG+GYYPQD
Sbjct: 149  KVPSRTSLREGFWDFLERYGFRYGDNLTRTLLPCEVKEMLKKIPNETRKKLAGKGYYPQD 208

Query: 310  GYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEIIKGSRSGAPNFESHEV 369
            GY+LQYLPVPPNCLSVPEISDGVT+MSSDPAV MLKK+LKQVEIIKGSRSGAPNFE+HEV
Sbjct: 209  GYVLQYLPVPPNCLSVPEISDGVTIMSSDPAVLMLKKVLKQVEIIKGSRSGAPNFEAHEV 268

Query: 370  EANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKAWLEKMRTLFIRKGSGFSS 429
            EANDLQ+AVDQYLQVRGTVKASRGIDAR+GVNKELNDPSTKAWLEKMRTLFIRKGSGFSS
Sbjct: 269  EANDLQMAVDQYLQVRGTVKASRGIDARYGVNKELNDPSTKAWLEKMRTLFIRKGSGFSS 328

Query: 430  RSVITGDAYKLVSEIGVPFEVAQRITFEERVSVHNIKYLQELVDKKLCLTYRDGSSAYSL 489
            RSVITGDAYKLV+EIGVPFEVAQRITFEERVSVHNIKYLQELVDKKLCLTYRDGSSAYSL
Sbjct: 329  RSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIKYLQELVDKKLCLTYRDGSSAYSL 388

Query: 490  REGSTGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHTVKINPLICG 549
            REGS GHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHTVKINPLICG
Sbjct: 389  REGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHTVKINPLICG 448

Query: 550  PLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFR 609
            PL ADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFR
Sbjct: 449  PLGADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFR 508

Query: 610  KYFLGKAAAQQLAMFVSSYLPPPALLGVHSESLHWTALQILQTVLPACFDCHGDSYLIKN 669
            KYF GKAAAQQLAMFV+S LPPPALLGV S SLHWTALQILQTVLP+CFDCHGDSYLIKN
Sbjct: 509  KYFFGKAAAQQLAMFVTSSLPPPALLGVRSNSLHWTALQILQTVLPSCFDCHGDSYLIKN 568

Query: 670  SDFLKFDFERDAMPSLVNEILTSIFFQKGPEEVLRFFDSLQPLLMEHIFSEGFSVGLDDY 729
            SDFLKFDF+RDAMPSL+NEI+TSIFFQKGPEEV+RFFDSLQPLLMEH+FSEGFSV LDDY
Sbjct: 569  SDFLKFDFDRDAMPSLINEIVTSIFFQKGPEEVMRFFDSLQPLLMEHVFSEGFSVSLDDY 628

Query: 730  SMPMAFLQALQKNIQVISPLLYQLRSTFNELVELQLENHIRSVKVPFTNFILKLSSLGKL 789
            SMPMAFLQALQKNIQVISPLLYQLRS+FNELVELQLENHIRSVKVPFTNFILKLSSLGKL
Sbjct: 629  SMPMAFLQALQKNIQVISPLLYQLRSSFNELVELQLENHIRSVKVPFTNFILKLSSLGKL 688

Query: 790  FDSKSDSAINKVVQQIGFLGLQLSDKGKFYSKTLIEDVASLFHNRYSSDKIDYPSAEFGL 849
            FDSKSD+AINKVVQQIGFLGLQLSDKGKFYSKTLI+DVASLFHNRYSSDK DYPSAEFGL
Sbjct: 689  FDSKSDAAINKVVQQIGFLGLQLSDKGKFYSKTLIDDVASLFHNRYSSDKNDYPSAEFGL 748

Query: 850  VKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNV 909
            VKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNV
Sbjct: 749  VKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNV 808

Query: 910  CSNSIIQLEYGIKAGMMQPYSLFPPGEPVGVLAATAMSNPAYKAVLDSTPSSNSSWDMMK 969
            CSNSIIQLEYGIKAGMM+PY LFPPGEPVGVLAATAMS PAYKAVLDSTPSSNSSWDMMK
Sbjct: 809  CSNSIIQLEYGIKAGMMKPYGLFPPGEPVGVLAATAMSTPAYKAVLDSTPSSNSSWDMMK 868

Query: 970  EILLCKVSFKNEPIDRRVILYLNNCDCGRKYCNENAAYVVKSHLKKVTLKDAAVDFMIEY 1029
            EILLCKV FKNEP+DRRVILYLNNCDCGRK+CNENAAYVVKSHLKKVTLKD A+DFMIEY
Sbjct: 869  EILLCKVGFKNEPVDRRVILYLNNCDCGRKHCNENAAYVVKSHLKKVTLKDVAMDFMIEY 928

Query: 1030 NRQPTPSGLGPGLVGHVHLNKMLLKELKISMTEVLRRCQETISSFKKKKKKIAHALRFSI 1089
            NRQPTPS LGPGLVGHVHLN++LL+EL+I+M +VLRRCQETISSFKKKKKK+A ALRF I
Sbjct: 929  NRQPTPSALGPGLVGHVHLNQVLLEELRINMADVLRRCQETISSFKKKKKKLAPALRFFI 988

Query: 1090 SEHCSFHQWNGEESTDMPC----------------------------------DPRISSA 1149
            SEHCSFHQ NGEE TDMPC                                  DPRISSA
Sbjct: 989  SEHCSFHQRNGEERTDMPCLTFWLETRDVHLERTSHILADVVFPLLSETIIKGDPRISSA 1048

Query: 1150 NVIWISPDSTSWQKNPSRWQDGELALDVCLEKSAVKQNGDAWRNVLDCCLPVMHLIDTSR 1209
            NVIWIS DSTSW++NPSRWQDGELALDVCLEKSAVK++GDAWRNVLDCCLP++HLIDT R
Sbjct: 1049 NVIWISSDSTSWERNPSRWQDGELALDVCLEKSAVKEDGDAWRNVLDCCLPIIHLIDTRR 1108

Query: 1210 SVPYAIKQVQELLGISCAFDQMIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNS 1269
            SVPYAIKQVQ+LLGISCAFDQ IQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNS
Sbjct: 1109 SVPYAIKQVQKLLGISCAFDQTIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNS 1168

Query: 1270 SGYKALSRALSIQVPFTEATLFTPRKCFERAAEKCHKDSLSSIVASCSWGKHVAVGTGSR 1329
             GYKALSRAL+IQVPFTEATLFTPR+CFERAA KCHKDSLSSIVASCSWGKHVAVGTGS+
Sbjct: 1169 GGYKALSRALNIQVPFTEATLFTPRRCFERAATKCHKDSLSSIVASCSWGKHVAVGTGSK 1228

Query: 1330 FDILWDQKELGCKQDEVVDVYNFLHMVRSGKSEESTSACLGEEIEDIMVEDEYGELALSP 1389
            FDILWDQKELG KQ +VVDVYNFLHMVRSGKSEESTSACLG EI+D+MVEDEYGEL LSP
Sbjct: 1229 FDILWDQKELGSKQADVVDVYNFLHMVRSGKSEESTSACLGVEIDDLMVEDEYGELTLSP 1288

Query: 1390 EPFSTSEKPVFEDSAEFEHCLDNYPGESKWEKAPSLGAVSTGGGQWENNENGKATNSSDD 1449
            EPFSTSEKPVFEDSAEFEHCLDN+          SLGA S GGGQWE+NEN K   +S D
Sbjct: 1289 EPFSTSEKPVFEDSAEFEHCLDNH----------SLGAASAGGGQWESNENSK---TSQD 1348

Query: 1450 NDWSGWGRKAEPDAAITNAPENISNSGWDTTPSWGNKATKTSNNNDWSNVGTKEVERDSI 1509
            NDWSGWG K +PD          S SGWDTTPSWGNKATK SN+N WS   TKEVERDS 
Sbjct: 1349 NDWSGWGTKVDPDV-------TTSKSGWDTTPSWGNKATKASNDNGWS---TKEVERDSF 1408

Query: 1510 TSMENTPKSGGWDTASTWGTKTKDVDSFK-GETAPEKSNSWSGLQNDKTETQDAFHKKVE 1569
            TS +NTPK+GGWD+A+TWG KTKDVDSFK GETAPEKSN WSGLQ++K ETQDAFHKKVE
Sbjct: 1409 TSTKNTPKTGGWDSAATWGMKTKDVDSFKEGETAPEKSNVWSGLQSNKAETQDAFHKKVE 1468

Query: 1570 MASKSSGWEDKAWSRETSKTEDSWSSQVKDKAESFQVQVQEVSTKTNGWGSAEGWSKNSG 1629
            +ASKS GW+DKAWSR TSKTED+WSS+ KDKAE +   VQEVS  +NGWGSA GW KN+G
Sbjct: 1469 IASKSGGWDDKAWSRGTSKTEDNWSSRAKDKAEPWLAHVQEVSPNSNGWGSAGGWGKNAG 1528

Query: 1630 DDHQSVAGWNDGQASMDREKVSDRWDSRATQRMESQRTSSWGSPTVCDSKDSFSSKAMEH 1689
            D  +S AG NDGQASMD EKVSDRWD R  QR               DSKD+F SK +EH
Sbjct: 1529 DGDESEAGRNDGQASMDLEKVSDRWDGRDVQR-------------TGDSKDNFQSKVVEH 1588

Query: 1690 SDSIALNHSWDQQKSPEASQG-FSNDVWGQQKSREVIKPSHVNNESNRHGWSSQIESHEG 1749
             DS+A+NHSWDQQK PE SQG + ND WGQQKS EV KPSHVNNESNRHGW S+IE +EG
Sbjct: 1589 GDSVAINHSWDQQKPPEVSQGEYGNDAWGQQKSWEVKKPSHVNNESNRHGWGSRIELNEG 1648

Query: 1750 SGHGFDQVTSEHKSSDTGGWDSQEKMDKPWDKQKSTQASESWGSQNDTQS---------- 1809
              H  DQVT     +D+GGWDSQ++MDKPW+KQKST+AS+SWGSQ D+QS          
Sbjct: 1649 PNHECDQVT-----NDSGGWDSQKQMDKPWEKQKSTEASQSWGSQKDSQSWGSQKDSQSW 1708

Query: 1810 ----------------------------------------------SWGQPKKAPEEFSW 1869
                                                          SWGQ ++ P+EFS 
Sbjct: 1709 GSQKDSQSWGSQKDSQSWGTQKDSQSWGSQKDSQSWGSLKDSQSQGSWGQLQRTPKEFSQ 1768

Query: 1870 GSQDDSNTQFSQLKPPETSLGWEQQKSPDVSHGWASHKESSEQTSSQGWDNKKNQGSKGW 1929
             SQDDSN  F   KPPETS GWEQQKSP+VSHGW SH +SS+ TSS GWDNKKNQGSK W
Sbjct: 1769 ESQDDSNKHFDNQKPPETSSGWEQQKSPEVSHGWGSHIDSSDSTSSHGWDNKKNQGSKSW 1828

Query: 1930 GGNAGEWKNRKNRPPKSPGILNDDANVRGIYTASGQRLDMFTTEEQDILADIEPIMQSIR 1989
            GGN GEWKNRKNRPPKSPG+ +DDAN+RG+YTASGQRLDMFTTEEQDILADIEPIMQSIR
Sbjct: 1829 GGNVGEWKNRKNRPPKSPGMTSDDANLRGLYTASGQRLDMFTTEEQDILADIEPIMQSIR 1888

Query: 1990 KVMHQSGYNDGDPLSAEDQSFVLESVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCFYV 2035
            K+MHQSGYNDGDPLSAEDQSF+L+SVFNFHPDKA KMGAGIDHFMVSRHSSFQESRCFYV
Sbjct: 1889 KIMHQSGYNDGDPLSAEDQSFILQSVFNFHPDKAVKMGAGIDHFMVSRHSSFQESRCFYV 1948

BLAST of CmUC01G007470 vs. ExPASy TrEMBL
Match: A0A6J1JRG8 (DNA-directed RNA polymerase subunit OS=Cucurbita maxima OX=3661 GN=LOC111486902 PE=3 SV=1)

HSP 1 Score: 3281.1 bits (8506), Expect = 0.0e+00
Identity = 1658/1988 (83.40%), Postives = 1757/1988 (88.38%), Query Frame = 0

Query: 130  CIAAISDCPITHASQLSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHI 189
            CIAAISDCPITHASQLSNPFLGLPIE+GKCESCGTSEPGKCEGHFGYIELPIPIYHPNHI
Sbjct: 29   CIAAISDCPITHASQLSNPFLGLPIEYGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHI 88

Query: 190  TELKKMLSLLCLKCLKMKKTKFPSKNIGFAERLLSSCCEDASQVSIREAKKPDGASYLQL 249
            TELKKMLSLLCLKCLKMKK KFPSKN+GFAERLL SCCEDASQVSIREAKK DGASYLQL
Sbjct: 89   TELKKMLSLLCLKCLKMKKNKFPSKNVGFAERLL-SCCEDASQVSIREAKKSDGASYLQL 148

Query: 250  KVPSRSSLREGFWDFLERYGFRYGDNLTRTLLPCEVKEMLKKIPNETRKKLAGRGYYPQD 309
            KVPSR+SLREGFWDFLERYGFRYGDNLTRTLLPCEVKEMLKKIPNETRKKLAG+GYYPQD
Sbjct: 149  KVPSRTSLREGFWDFLERYGFRYGDNLTRTLLPCEVKEMLKKIPNETRKKLAGKGYYPQD 208

Query: 310  GYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEIIKGSRSGAPNFESHEV 369
            GY+LQYLPVPPNCLSVPEISDGVT+MSSDPAV MLKK+LKQVEIIKGSRSGAPNFE+HEV
Sbjct: 209  GYVLQYLPVPPNCLSVPEISDGVTIMSSDPAVLMLKKVLKQVEIIKGSRSGAPNFEAHEV 268

Query: 370  EANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKAWLEKMRTLFIRKGSGFSS 429
            EANDLQ+AVDQYLQVRGTVKASRGIDAR+GVNKELNDPSTKAWLEKMRTLFIRKGSGFSS
Sbjct: 269  EANDLQMAVDQYLQVRGTVKASRGIDARYGVNKELNDPSTKAWLEKMRTLFIRKGSGFSS 328

Query: 430  RSVITGDAYKLVSEIGVPFEVAQRITFEERVSVHNIKYLQELVDKKLCLTYRDGSSAYSL 489
            RSVITGDAYKLV+EIGVPFEVAQRITFEERVSVHNIKYLQELVD KLCLTYRDGSSAYSL
Sbjct: 329  RSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNIKYLQELVDNKLCLTYRDGSSAYSL 388

Query: 490  REGSTGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHTVKINPLICG 549
            REGS GHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHTVKINPLICG
Sbjct: 389  REGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHTVKINPLICG 448

Query: 550  PLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFR 609
            PL ADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFR
Sbjct: 449  PLGADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFR 508

Query: 610  KYFLGKAAAQQLAMFVSSYLPPPALLGVHSESLHWTALQILQTVLPACFDCHGDSYLIKN 669
            KYFLGKAAAQQLAMFV+S LPPPALLGV S +LHWTALQILQTVLPACFDCHGDSYLIKN
Sbjct: 509  KYFLGKAAAQQLAMFVTSSLPPPALLGVRSNTLHWTALQILQTVLPACFDCHGDSYLIKN 568

Query: 670  SDFLKFDFERDAMPSLVNEILTSIFFQKGPEEVLRFFDSLQPLLMEHIFSEGFSVGLDDY 729
            SDFLKFDF+RDAMPSL+NEI+TSIFFQKG EEV+RFFDSLQPLLMEH+FSEGFSV LDDY
Sbjct: 569  SDFLKFDFDRDAMPSLINEIVTSIFFQKGSEEVMRFFDSLQPLLMEHVFSEGFSVSLDDY 628

Query: 730  SMPMAFLQALQKNIQVISPLLYQLRSTFNELVELQLENHIRSVKVPFTNFILKLSSLGKL 789
            SMPMAFLQALQKNIQVISPLLYQLRS+FNELVELQLENHIRSVKVPFTNFILKLSSLGKL
Sbjct: 629  SMPMAFLQALQKNIQVISPLLYQLRSSFNELVELQLENHIRSVKVPFTNFILKLSSLGKL 688

Query: 790  FDSKSDSAINKVVQQIGFLGLQLSDKGKFYSKTLIEDVASLFHNRYSSDKIDYPSAEFGL 849
            FDSKSD+AINKVVQQIGFLGLQLSDKGKFYSKTLI+DVASLFHNRYSSDK DYPSAEFGL
Sbjct: 689  FDSKSDAAINKVVQQIGFLGLQLSDKGKFYSKTLIDDVASLFHNRYSSDKNDYPSAEFGL 748

Query: 850  VKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNV 909
            VKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNV
Sbjct: 749  VKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNV 808

Query: 910  CSNSIIQLEYGIKAGMMQPYSLFPPGEPVGVLAATAMSNPAYKAVLDSTPSSNSSWDMMK 969
            CSNSIIQLEYGIKAGMM+PY LFPPGEPVGVLAATAMS PAYKAVLDSTPSSNSSWDMMK
Sbjct: 809  CSNSIIQLEYGIKAGMMKPYGLFPPGEPVGVLAATAMSTPAYKAVLDSTPSSNSSWDMMK 868

Query: 970  EILLCKVSFKNEPIDRRVILYLNNCDCGRKYCNENAAYVVKSHLKKVTLKDAAVDFMIEY 1029
            EILLCKV FKNEP+DRRVILYLNNCDCGRK+CNENAAYVVKSHLKKVTLKD A+DFMIEY
Sbjct: 869  EILLCKVGFKNEPVDRRVILYLNNCDCGRKHCNENAAYVVKSHLKKVTLKDVAMDFMIEY 928

Query: 1030 NRQPTPSGLGPGLVGHVHLNKMLLKELKISMTEVLRRCQETISSFKKKKKKIAHALRFSI 1089
            NRQPTPS LGPGLVGHVHLN++LL+EL+I+M +VLRRCQETISSFKKKKKK+A  LRF I
Sbjct: 929  NRQPTPSALGPGLVGHVHLNQVLLEELRINMADVLRRCQETISSFKKKKKKLAPTLRFFI 988

Query: 1090 SEHCSFHQWNGEESTDMPC----------------------------------DPRISSA 1149
            SEHCSFHQ NGEE TDMPC                                  DPRISSA
Sbjct: 989  SEHCSFHQRNGEERTDMPCLTFWLETRDVHLERTSHILADVVFPLLSETIIKGDPRISSA 1048

Query: 1150 NVIWISPDSTSWQKNPSRWQDGELALDVCLEKSAVKQNGDAWRNVLDCCLPVMHLIDTSR 1209
            NVIWIS DSTSW++NPSRWQDGELALDVCLEKSAVK++GDAWRNVLDCCLP++HLIDT R
Sbjct: 1049 NVIWISSDSTSWERNPSRWQDGELALDVCLEKSAVKEDGDAWRNVLDCCLPIIHLIDTRR 1108

Query: 1210 SVPYAIKQVQELLGISCAFDQMIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNS 1269
            SVPYAIKQVQ+LLGISCAFDQ IQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNS
Sbjct: 1109 SVPYAIKQVQKLLGISCAFDQTIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNS 1168

Query: 1270 SGYKALSRALSIQVPFTEATLFTPRKCFERAAEKCHKDSLSSIVASCSWGKHVAVGTGSR 1329
             GYKALSRAL+IQVPFTEATLFTPR+CFERAA KCHKDSLSSIVASCSWGKHVAVGTGS+
Sbjct: 1169 GGYKALSRALNIQVPFTEATLFTPRRCFERAATKCHKDSLSSIVASCSWGKHVAVGTGSK 1228

Query: 1330 FDILWDQKELGCKQDEVVDVYNFLHMVRSGKSEESTSACLGEEIEDIMVEDEYGELALSP 1389
            FDILWDQKELG KQ +VVDVYNFLHMVRSGKSEESTSACLG EI+D+MVEDEYGEL LSP
Sbjct: 1229 FDILWDQKELGSKQADVVDVYNFLHMVRSGKSEESTSACLGVEIDDLMVEDEYGELTLSP 1288

Query: 1390 EPFSTSEKPVFEDSAEFEHCLDNYPGESKWEKAPSLGAVSTGGGQWENNENGKATNSSDD 1449
            +PFSTSEKPVFEDSAEFEHCLDN+          SLGA S GGGQWE+NEN K   +S D
Sbjct: 1289 DPFSTSEKPVFEDSAEFEHCLDNH----------SLGAASAGGGQWESNENCK---TSQD 1348

Query: 1450 NDWSGWGRKAEPDAAITNAPENISNSGWDTTPSWGNKATKTSNNNDWSNVGTKEVERDSI 1509
            NDWSGWG K +PD          S SGWDTTPSWGNKATK SN+N WS   +KEVE+DS 
Sbjct: 1349 NDWSGWGTKVDPDV-------TTSKSGWDTTPSWGNKATKASNDNGWS---SKEVEQDSF 1408

Query: 1510 TSMENTPKSGGWDTASTWGTKTKDVDSFK-GETAPEKSNSWSGLQNDKTETQDAFHKKVE 1569
            TS +NTPK+GGWD+A+TWGTKTKDVDSFK GETAPEKSN WSGLQ++K ETQDAFHKKVE
Sbjct: 1409 TSTKNTPKTGGWDSAATWGTKTKDVDSFKEGETAPEKSNVWSGLQSNKAETQDAFHKKVE 1468

Query: 1570 MASKSSGWEDKAWSRETSKTEDSWSSQVKDKAESFQVQVQEVSTKTNGWGSAEGWSKNSG 1629
            +ASKS GW+DKAWSR TSKTED+WSS+ KDKAE +Q  VQEVS  +NGWGSA GW KN+G
Sbjct: 1469 IASKSGGWDDKAWSRGTSKTEDNWSSRAKDKAEPWQAHVQEVSPNSNGWGSAGGWGKNAG 1528

Query: 1630 DDHQSVAGWNDGQASMDREKVSDRWDSRATQRMESQRTSSWGSPTVCDSKDSFSSKAMEH 1689
            D  +S AGWNDGQ SMD EKVSDRWD R  QR               DS+D+F SK +E 
Sbjct: 1529 DG-ESGAGWNDGQTSMDLEKVSDRWDGRDVQR-------------TGDSEDNFQSKVVEL 1588

Query: 1690 SDSIALNHSWDQQKSPEASQG-FSNDVWGQQKSREVIKPSHVNNESNRHGWSSQIESHEG 1749
             DS+A+NHSWDQQK PE SQG + ND WGQQKS EV KPSHVNNESNRHGW S+IE +EG
Sbjct: 1589 GDSVAINHSWDQQKPPEVSQGEYGNDAWGQQKSWEVKKPSHVNNESNRHGWGSRIELNEG 1648

Query: 1750 SGHGFDQVTSEHKSSDTGGWDSQEKMDKPWDKQKSTQASESWGSQNDTQS---------- 1809
              H  DQVT     SD+GGWDSQ+KMDKPW+KQKST+AS+SWGSQ D+QS          
Sbjct: 1649 PNHECDQVT-----SDSGGWDSQKKMDKPWEKQKSTEASQSWGSQKDSQSWGSQKDSQSW 1708

Query: 1810 -------------------------------------SWGQPKKAPEEFSWGSQDDSNTQ 1869
                                                 SWGQ ++ P+EFS  SQDDSN  
Sbjct: 1709 GSQKDSQSWGSQKDSQSWGSQKDSQSWGSQKDSHSQGSWGQLQRTPKEFSQESQDDSNKH 1768

Query: 1870 FSQLKPPETSLGWEQQKSPDVSHGWASHKESSEQTSSQGWDNKKNQGSKGWGGNAGEWKN 1929
            F   KPPETS GWEQQKSP+VSHGW SH +SS+ TSS GWDNKKNQGSK WGGN GEWKN
Sbjct: 1769 FDNQKPPETSSGWEQQKSPEVSHGWGSHIDSSDSTSSHGWDNKKNQGSKSWGGNVGEWKN 1828

Query: 1930 RKNRPPKSPGILNDDANVRGIYTASGQRLDMFTTEEQDILADIEPIMQSIRKVMHQSGYN 1989
            RKNRPPKSPG+ +DDAN+RG+YTASGQRLDMFTTEEQDILADIEPIMQSIRK+MHQSGYN
Sbjct: 1829 RKNRPPKSPGMTSDDANLRGLYTASGQRLDMFTTEEQDILADIEPIMQSIRKIMHQSGYN 1888

Query: 1990 DGDPLSAEDQSFVLESVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCFYVVTTDGHKED 2035
            DGDPLSAEDQSF+L+SVFNFHPDKA KMGAGIDHFMVSRHSSFQESRCFYVV+TDGHKED
Sbjct: 1889 DGDPLSAEDQSFILQSVFNFHPDKAVKMGAGIDHFMVSRHSSFQESRCFYVVSTDGHKED 1948

BLAST of CmUC01G007470 vs. ExPASy TrEMBL
Match: A0A6J1CY08 (DNA-directed RNA polymerase subunit OS=Momordica charantia OX=3673 GN=LOC111015618 PE=3 SV=1)

HSP 1 Score: 3264.2 bits (8462), Expect = 0.0e+00
Identity = 1661/1972 (84.23%), Postives = 1744/1972 (88.44%), Query Frame = 0

Query: 130  CIAAISDCPITHASQLSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHI 189
            CIAAISDCPITHASQLSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPI+HPNHI
Sbjct: 29   CIAAISDCPITHASQLSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPIFHPNHI 88

Query: 190  TELKKMLSLLCLKCLKMKKTKFPSKNIGFAERLLSSCCEDASQVSIREAKKPDGASYLQL 249
            TELKKMLSLLCLKCLKMKK KFPSKNIGFAERLLSSCCEDASQVSIRE KK DGASYLQL
Sbjct: 89   TELKKMLSLLCLKCLKMKKNKFPSKNIGFAERLLSSCCEDASQVSIREMKKADGASYLQL 148

Query: 250  KVPSRSSLREGFWDFLERYGFRYGDNLTRTLLPCEVKEMLKKIPNETRKKLAGRGYYPQD 309
            KVPSR+ LREGFWDFLERYGFRYGDNLTRTLLPCEVKEMLKKIPNE RKKLAG+GYYPQD
Sbjct: 149  KVPSRTPLREGFWDFLERYGFRYGDNLTRTLLPCEVKEMLKKIPNEARKKLAGKGYYPQD 208

Query: 310  GYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEIIKGSRSGAPNFESHEV 369
            GYILQYLPVPPNCLSVPEISDGVT+MSSDPAVSMLKKILKQVEIIKGSRSGAPNFESHEV
Sbjct: 209  GYILQYLPVPPNCLSVPEISDGVTIMSSDPAVSMLKKILKQVEIIKGSRSGAPNFESHEV 268

Query: 370  EANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKAWLEKMRTLFIRKGSGFSS 429
            EANDLQLAVDQYLQVRGTVKASRGIDAR+GVNKELNDPSTKAWLEKMRTLFIRKGSGFSS
Sbjct: 269  EANDLQLAVDQYLQVRGTVKASRGIDARYGVNKELNDPSTKAWLEKMRTLFIRKGSGFSS 328

Query: 430  RSVITGDAYKLVSEIGVPFEVAQRITFEERVSVHNIKYLQELVDKKLCLTYRDGSSAYSL 489
            RSVITGDAYKLV+EIGVPFEVAQRITFEERVSVHNI YLQELVDKKLCLTYRDGSSAYSL
Sbjct: 329  RSVITGDAYKLVNEIGVPFEVAQRITFEERVSVHNINYLQELVDKKLCLTYRDGSSAYSL 388

Query: 490  REGSTGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHTVKINPLICG 549
            REGS GHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHTVKINPLICG
Sbjct: 389  REGSMGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHTVKINPLICG 448

Query: 550  PLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFR 609
            PLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQL  DSLLSLKMMFR
Sbjct: 449  PLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLGTDSLLSLKMMFR 508

Query: 610  KYFLGKAAAQQLAMFVSSYLPPPALLGVHSESLHWTALQILQTVLPACFDCHGDSYLIKN 669
             YFLGKAAAQQLAMFVSS LP PA+LG  S+S HWTALQILQTVLPA FDCHGDSYLIKN
Sbjct: 509  TYFLGKAAAQQLAMFVSSSLPSPAILGARSDSPHWTALQILQTVLPAYFDCHGDSYLIKN 568

Query: 670  SDFLKFDFERDAMPSLVNEILTSIFFQKGPEEVLRFFDSLQPLLMEHIFSEGFSVGLDDY 729
            SDFLKFDF+RDAMPSL+NEI+TSIFFQ GPEEVLRFFDSLQPLLMEHIFSEGFSVGLDDY
Sbjct: 569  SDFLKFDFDRDAMPSLINEIVTSIFFQNGPEEVLRFFDSLQPLLMEHIFSEGFSVGLDDY 628

Query: 730  SMPMAFLQALQKNIQVISPLLYQLRSTFNELVELQLENHIRSVKVPFTNFILKLSSLGKL 789
            SMPMA LQALQKNIQVISPLLYQLRSTFNELVELQLENHIRSVKVPFTNFILKLSSLGKL
Sbjct: 629  SMPMALLQALQKNIQVISPLLYQLRSTFNELVELQLENHIRSVKVPFTNFILKLSSLGKL 688

Query: 790  FDSKSDSAINKVVQQIGFLGLQLSDKGKFYSKTLIEDVASLFHNRYSSDKIDYPSAEFGL 849
            FDSKSDSAINKVVQQIGFLGLQLSDKGKFYSKTLIEDVASLFHNRY SDKIDYPSAEFGL
Sbjct: 689  FDSKSDSAINKVVQQIGFLGLQLSDKGKFYSKTLIEDVASLFHNRYVSDKIDYPSAEFGL 748

Query: 850  VKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNV 909
            VKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNV
Sbjct: 749  VKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNV 808

Query: 910  CSNSIIQLEYGIKAGMMQPYSLFPPGEPVGVLAATAMSNPAYKAVLDSTPSSNSSWDMMK 969
            CSNSIIQLEYG+KAGMM+P++LFPPGEPVGVLAATAMSNPAYKAVLDSTPSS SSWDMMK
Sbjct: 809  CSNSIIQLEYGVKAGMMKPHNLFPPGEPVGVLAATAMSNPAYKAVLDSTPSSTSSWDMMK 868

Query: 970  EILLCKVSFKNEPIDRRVILYLNNCDCGRKYCNENAAYVVKSHLKKVTLKDAAVDFMIEY 1029
            EILLCKVSFKNEPIDRRVILYLNNC CGRK+CNENAAY+VKSHLKKVTLKDA VDFMIEY
Sbjct: 869  EILLCKVSFKNEPIDRRVILYLNNCACGRKHCNENAAYLVKSHLKKVTLKDATVDFMIEY 928

Query: 1030 NRQPTPSGLGPGLVGHVHLNKMLLKELKISMTEVLRRCQETISSF-KKKKKKIAHALRFS 1089
            NRQ T SG GPGLVGHVHLNKMLLKELKI+M +V RRC+ETISSF KKKKKK AHALRFS
Sbjct: 929  NRQLTLSGFGPGLVGHVHLNKMLLKELKINMADVSRRCEETISSFRKKKKKKFAHALRFS 988

Query: 1090 ISEHCSFHQWNGEESTDMPC----------------------------------DPRISS 1149
             SE+CSFHQ NGE+STDMPC                                  DPRIS+
Sbjct: 989  FSENCSFHQSNGEDSTDMPCLIFWHETRDSHLERTAHIFADIVFPLLSETIIKGDPRISA 1048

Query: 1150 ANVIWISPDSTSWQKNPSRWQDGELALDVCLEKSAVKQNGDAWRNVLDCCLPVMHLIDTS 1209
            ANVIWISPDSTSWQ+NPSRWQDGELALD+CLEKSAVKQNGDAWRNV+DCCLPV+HLIDT 
Sbjct: 1049 ANVIWISPDSTSWQRNPSRWQDGELALDICLEKSAVKQNGDAWRNVMDCCLPVIHLIDTR 1108

Query: 1210 RSVPYAIKQVQELLGISCAFDQMIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFN 1269
            RS+PYAIKQVQELLGISCAFDQ +QRL+KSVSMVSKGVLGDHLILLANSMTCTGNMIGFN
Sbjct: 1109 RSIPYAIKQVQELLGISCAFDQTVQRLAKSVSMVSKGVLGDHLILLANSMTCTGNMIGFN 1168

Query: 1270 SSGYKALSRALSIQVPFTEATLFTPRKCFERAAEKCHKDSLSSIVASCSWGKHVAVGTGS 1329
            S GYKALSRAL+IQVPFTEATLFTPR+CFERAAEKCHKDSLSSIVASCSWGKHVAVGTGS
Sbjct: 1169 SGGYKALSRALNIQVPFTEATLFTPRRCFERAAEKCHKDSLSSIVASCSWGKHVAVGTGS 1228

Query: 1330 RFDILWDQKELGCKQDEVVDVYNFLHMVRSGKSEESTSACLGEEIEDIMVEDEYGELALS 1389
            RFDILWDQKELGCKQD+V+DVYNFLHMVRS KSEE TSACLGEEIED+MVEDEY EL LS
Sbjct: 1229 RFDILWDQKELGCKQDDVLDVYNFLHMVRSAKSEEFTSACLGEEIEDLMVEDEYRELTLS 1288

Query: 1390 PEPFSTSEKPVFEDSAEFEHCLDNYPGESKWEKAPSLGAVSTGGGQWENNENGKATNSSD 1449
            PEPFSTSEKPVFEDSAEFE+CLDNYPGESKWEKAP  GA STG GQWENNEN KATNSS+
Sbjct: 1289 PEPFSTSEKPVFEDSAEFENCLDNYPGESKWEKAPPSGAGSTGSGQWENNENTKATNSSN 1348

Query: 1450 DNDWSGWGRKAEPDAAITNAPENISNSGWDTTPSWGNKATK-TSNNNDWSNVGTKEVERD 1509
            D+DWSGWGRK EPD   T A EN S SGWD+TPSWGNKAT  T+N+NDWSN  TKEVE D
Sbjct: 1349 DHDWSGWGRKVEPDVVTTKAQENTSKSGWDSTPSWGNKATNTTTNDNDWSNSATKEVEPD 1408

Query: 1510 SITSMENTPKSGGWDTASTWGTKTKDVDSFKGETAPEKSNSWSGLQNDKTETQDAFHKKV 1569
            S  SMENTPKSGGWDTA+TWGTK KDVD+FKGET PEK+N WSG QNDK ETQDAF KK+
Sbjct: 1409 SFNSMENTPKSGGWDTAATWGTKAKDVDNFKGETEPEKANVWSGWQNDKAETQDAFIKKI 1468

Query: 1570 EMASKSSGWEDKAWSRETSKTEDSWSSQVKDKAESFQVQVQEVSTKTNGWGSAEGWSKNS 1629
               S+S G EDKAWS  TSKT D+WS+QVKDKAES QVQVQEV +KTNGW SA GW KNS
Sbjct: 1469 N--SRSCGSEDKAWSTGTSKTYDNWSNQVKDKAESCQVQVQEVPSKTNGWDSAGGWQKNS 1528

Query: 1630 GDDHQSVAGWNDGQASMDREKVSDRWDSRATQRMESQRTSSWGSPTVCDSKDSFSSKAME 1689
            GD  QS A  ND QASMD E V+DRW SRATQR               DSKD+F SKA+E
Sbjct: 1529 GDADQSEACRNDDQASMDLETVADRWGSRATQRK--------------DSKDNFPSKAVE 1588

Query: 1690 HSDSIALNHSWDQQKSPEASQGFS-NDVWGQQKSREVIKPSHVNNESNRHGWSSQIESHE 1749
            H DS  +NHSW+Q KS E  +G S ND WGQ+KS++VIKPS         GW SQ++S+E
Sbjct: 1589 HGDSPLINHSWNQHKSSEVFRGESGNDFWGQRKSQDVIKPS--------QGWGSQVKSNE 1648

Query: 1750 GSGHG------------FDQVTSEHKSSDTGGWDSQEKMDKPWDKQKSTQASESWGSQND 1809
            GS                DQV SEHKSSD+ GWDSQEK++KPWDKQKS +AS+SW SQND
Sbjct: 1649 GSSQNTQVERLWSSQNESDQVASEHKSSDSRGWDSQEKLNKPWDKQKSLEASQSWSSQND 1708

Query: 1810 TQSSWGQPKKAPEEFSWGSQDDSNTQFSQL-KPPETSLGWEQQKSPD---VSHGWASHKE 1869
            +  SWGQ ++  EEFS GSQDDSN QFSQ+ K PE S GW   K       SHGW SHKE
Sbjct: 1709 SMGSWGQLQRESEEFSQGSQDDSNKQFSQVQKSPEVSHGWGSHKESSELTTSHGWGSHKE 1768

Query: 1870 SSEQTSSQGWDN--------------KKNQGSKGWGGNAGEWKNRKNRPPKSPGILNDDA 1929
            SSE  +S GW +              KKNQGSKGWG N GEWKNRKNRPPKSPGILNDDA
Sbjct: 1769 SSELATSHGWGSHKESSELTTSHAWEKKNQGSKGWGANVGEWKNRKNRPPKSPGILNDDA 1828

Query: 1930 NVRGIYTASGQRLDMFTTEEQDILADIEPIMQSIRKVMHQSGYNDGDPLSAEDQSFVLES 1989
             +R IYTASGQRLDMFTTEEQDILADIEPIMQSIRK+MHQSGYNDGDPLSAEDQSF+L++
Sbjct: 1829 GLRAIYTASGQRLDMFTTEEQDILADIEPIMQSIRKIMHQSGYNDGDPLSAEDQSFILQN 1888

Query: 1990 VFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCFYVVTTDGHKEDFSYRKCLDNFIKGKYP 2035
            VFNFHPDKA KMGAGIDHFMVSRHSSFQESRCFYVV+TDGHKEDFSYRKCLDNF+KGKYP
Sbjct: 1889 VFNFHPDKAVKMGAGIDHFMVSRHSSFQESRCFYVVSTDGHKEDFSYRKCLDNFVKGKYP 1948

BLAST of CmUC01G007470 vs. TAIR 10
Match: AT2G40030.1 (nuclear RNA polymerase D1B )

HSP 1 Score: 1765.0 bits (4570), Expect = 0.0e+00
Identity = 990/1981 (49.97%), Postives = 1285/1981 (64.87%), Query Frame = 0

Query: 126  NHPQCIAAISDCPITHASQLSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPIYH 185
            +H  CI +IS+  I H SQL+N FLGLP+EFGKCESCG +EP KCEGHFGYI+LP+PIYH
Sbjct: 24   HHEICIQSISESAINHPSQLTNAFLGLPLEFGKCESCGATEPDKCEGHFGYIQLPVPIYH 83

Query: 186  PNHITELKKMLSLLCLKCLKMKKTKFPSKNIGFAERLLSSCCEDASQVSIREAKKPDGAS 245
            P H+ ELK+MLSLLCLKCLK+KK K  S   G A+RLL  CCE+ASQ+SI++ +  DGAS
Sbjct: 84   PAHVNELKQMLSLLCLKCLKIKKAKGTSG--GLADRLLGVCCEEASQISIKD-RASDGAS 143

Query: 246  YLQLKVPSRSSLREGFWDFLERYGFRYGDNLTRTLLPCEVKEMLKKIPNETRKKLAGRGY 305
            YL+LK+PSRS L+ G W+FLERYG+RYG + TR LL  EVKE+L++IP E+RKKL  +G+
Sbjct: 144  YLELKLPSRSRLQPGCWNFLERYGYRYGSDYTRPLLAREVKEILRRIPEESRKKLTAKGH 203

Query: 306  YPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEIIKGSRSGAPNFE 365
             PQ+GYIL+YLPVPPNCLSVPE SDG + MS DP+   LK +LK+V  IK SRSG  NFE
Sbjct: 204  IPQEGYILEYLPVPPNCLSVPEASDGFSTMSVDPSRIELKDVLKKVIAIKSSRSGETNFE 263

Query: 366  SHEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKAWLEKMRTLFIRKGS 425
            SH+ EA+++   VD YLQVRGT KA+R ID R+GV+K  +  S+KAW EKMRTLFIRKGS
Sbjct: 264  SHKAEASEMFRVVDTYLQVRGTAKAARNIDMRYGVSKISDSSSSKAWTEKMRTLFIRKGS 323

Query: 426  GFSSRSVITGDAYKLVSEIGVPFEVAQRITFEERVSVHNIKYLQELVDKKLCLTYRDGSS 485
            GFSSRSVITGDAY+ V+E+G+P E+AQRITFEERVSVHN  YLQ+LVD KLCL+Y  GS+
Sbjct: 324  GFSSRSVITGDAYRHVNEVGIPIEIAQRITFEERVSVHNRGYLQKLVDDKLCLSYTQGST 383

Query: 486  AYSLREGSTGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALRVYLHDDHTVKINP 545
             YSLR+GS GHT LKPGQ+VHRR+MDGD+VFINRPPTTHKHSLQALRVY+H+D+TVKINP
Sbjct: 384  TYSLRDGSKGHTELKPGQVVHRRVMDGDVVFINRPPTTHKHSLQALRVYVHEDNTVKINP 443

Query: 546  LICGPLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSLK 605
            L+C PLSADFDGDC+HLFYPQS++AKAEV+ LFSVEKQLLSSH+G L LQ+ +DSLLSL+
Sbjct: 444  LMCSPLSADFDGDCVHLFYPQSLSAKAEVMELFSVEKQLLSSHTGQLILQMGSDSLLSLR 503

Query: 606  MMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVHSESLHWTALQILQTVLPACFDCHGDSY 665
            +M  + FL KA AQQLAM+ S  LPPPAL         WT  QILQ   P    C GD +
Sbjct: 504  VMLERVFLDKATAQQLAMYGSLSLPPPALRKSSKSGPAWTVFQILQLAFPERLSCKGDRF 563

Query: 666  LIKNSDFLKFDFERDAMPSLVNEILTSIFFQKGPEEVLRFFDSLQPLLMEHIFSEGFSVG 725
            L+  SD LKFDF  DAM S++NEI+TSIF +KGP+E L FFDSLQPLLME +F+EGFS+ 
Sbjct: 564  LVDGSDLLKFDFGVDAMGSIINEIVTSIFLEKGPKETLGFFDSLQPLLMESLFAEGFSLS 623

Query: 726  LDDYSMPMAFLQALQK-NIQVISPLLYQLRSTFNELVELQLENHIRSVKVPFTNFILKLS 785
            L+D SM  A +  +    I+ ISP++ +LR ++ +  ELQLEN I  VK    NF+LK  
Sbjct: 624  LEDLSMSRADMDVIHNLIIREISPMVSRLRLSYRD--ELQLENSIHKVKEVAANFMLKSY 683

Query: 786  SLGKLFDSKSDSAINKVVQQIGFLGLQLSDKGKFYSKTLIEDVASLFHNRYSSDKIDYPS 845
            S+  L D KS+SAI K+VQQ GFLGLQLSDK KFY+KTL+ED+A     +Y        S
Sbjct: 684  SIRNLIDIKSNSAITKLVQQTGFLGLQLSDKKKFYTKTLVEDMAIFCKRKYGRIS---SS 743

Query: 846  AEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICYDG 905
             +FG+VKGCFFHGLDPYEEM HSI+ REV+VRSSRGL EPGTLFKNLMA+LRD+VI  DG
Sbjct: 744  GDFGIVKGCFFHGLDPYEEMAHSIAAREVIVRSSRGLAEPGTLFKNLMAVLRDIVITNDG 803

Query: 906  TVRNVCSNSIIQLEYGIKAGMMQPYSLFPPGEPVGVLAATAMSNPAYKAVLDSTPSSNSS 965
            TVRN CSNS+IQ +YG+ +       LF  GEPVGVLAATAMSNPAYKAVLDS+P+SNSS
Sbjct: 804  TVRNTCSNSVIQFKYGVDSERGH-QGLFEAGEPVGVLAATAMSNPAYKAVLDSSPNSNSS 863

Query: 966  WDMMKEILLCKVSFKNEPIDRRVILYLNNCDCGRKYCNENAAYVVKSHLKKVTLKDAAVD 1025
            W++MKE+LLCKV+F+N   DRRVILYLN C CG+++C ENAA  V++ L KV+LKD AV+
Sbjct: 864  WELMKEVLLCKVNFQNTTNDRRVILYLNECHCGKRFCQENAACTVRNKLNKVSLKDTAVE 923

Query: 1026 FMIEYNRQPTPS---GLGPGLVGHVHLNKMLLKELKISMTEVLRRCQETISSFKKKKKKI 1085
            F++EY +QPT S   G+   L GH+HLNK LL++  ISM ++ ++C++ I+S  +KKKK 
Sbjct: 924  FLVEYRKQPTISEIFGIDSCLHGHIHLNKTLLQDWNISMQDIHQKCEDVINSLGQKKKKK 983

Query: 1086 A----HALRFSISEHCSFHQWNGEESTDMPC----------------------------- 1145
            A         S+SE CSF    G + +DMPC                             
Sbjct: 984  ATDDFKRTSLSVSECCSFRDPCGSKGSDMPCLTFSYNATDPDLERTLDVLCNTVYPVLLE 1043

Query: 1146 -----DPRISSANVIWISPDSTSWQKNPSRWQDGELALDVCLEKSAVKQNGDAWRNVLDC 1205
                 D RI SAN+IW S D T+W +N    + GE  LDV +EKSAVKQ+GDAWR V+D 
Sbjct: 1044 IVIKGDSRICSANIIWNSSDMTTWIRNRHASRRGEWVLDVTVEKSAVKQSGDAWRVVIDS 1103

Query: 1206 CLPVMHLIDTSRSVPYAIKQVQELLGISCAFDQMIQRLSKSVSMVSKGVLGDHLILLANS 1265
            CL V+HLIDT RS+PY++KQVQELLG+SCAF+Q +QRLS SV MVSKGVL +H+ILLAN+
Sbjct: 1104 CLSVLHLIDTKRSIPYSVKQVQELLGLSCAFEQAVQRLSASVRMVSKGVLKEHIILLANN 1163

Query: 1266 MTCTGNMIGFNSSGYKALSRALSIQVPFTEATLFTPRKCFERAAEKCHKDSLSSIVASCS 1325
            MTC+G M+GFNS GYKAL+R+L+I+ PFTEATL  PRKCFE+AAEKCH DSLS++V SCS
Sbjct: 1164 MTCSGTMLGFNSGGYKALTRSLNIKAPFTEATLIAPRKCFEKAAEKCHTDSLSTVVGSCS 1223

Query: 1326 WGKHVAVGTGSRFDILWDQKELGCKQDEVVDVYNFLHMVRSGKSEESTSACLGEEIEDIM 1385
            WGK V VGTGS+F++LW+QKE G    E  DVY+FL MV S  + ++  +  G ++    
Sbjct: 1224 WGKRVDVGTGSQFELLWNQKETGLDDKEETDVYSFLQMVISTTNADAFVSSPGFDV---- 1283

Query: 1386 VEDEYGELALSPEPFSTSEKPVFEDSAEFEHCLD-NYPGESKWEKAPSLGAVSTGGGQWE 1445
             E+E  E A SPE  S   +P FEDSA+F++  D   P  + WEK+ S     +GG +W 
Sbjct: 1284 TEEEMAEWAESPERDSALGEPKFEDSADFQNLHDEGKPSGANWEKSSSWDNGCSGGSEWG 1343

Query: 1446 NNENGKATNSSDDNDWSGWGRKAEPDAAITNAPENISNSGWDTTPSWGNKATKTSNNNDW 1505
             +++               G +A P+            S W+       K T     + W
Sbjct: 1344 VSKS--------------TGGEANPE------------SNWE-------KTTNVEKEDAW 1403

Query: 1506 SNVGTKEVERDSITSMENTPKSGGWDTASTWGTKTKDVDSF---KGETAPEKSNSWSGLQ 1565
            S+  T++  ++S  S          D+   WG KTKD D+      ET+P   +S     
Sbjct: 1404 SSWNTRKDAQESSKS----------DSGGAWGIKTKDADADTTPNWETSPAPKDSIVPEN 1463

Query: 1566 NDKTETQDAF-HKKVEMASKSSGWEDKAWSRETSK------------TEDSWSSQVKDKA 1625
            N+   T D + HK V        W+ K W  E++             + D  +S+ +  A
Sbjct: 1464 NE--PTSDVWGHKSV----SDKSWDKKNWGTESAPAAWGSTDAAVWGSSDKKNSETESDA 1523

Query: 1626 ESFQVQVQEVSTKTNGWGSAEGWSKNSGDDHQSVAGWNDGQASMDREKVSDRWDSRATQR 1685
             ++  + +  S   +G G    W+K S +   + A W     +       + WD +  + 
Sbjct: 1524 AAWGSRDKNNSDVGSGAGVLGPWNKKSSETESNGATWGSSDKTKSGAAAWNSWDKKNIE- 1583

Query: 1686 MESQRTSSWGSPTVCDSKDSFSSKAMEHSDSIALNHSWDQQKSPEASQGFSNDVWGQQKS 1745
                  ++WGS            K  E     A   +WD++KS E   G +    G +K+
Sbjct: 1584 -TDSEPAAWGSQ---------GKKNSETESGPAAWGAWDKKKS-ETEPGPAGWGMGDKKN 1643

Query: 1746 REV-IKPSHVNNESNRHGWSSQIESHEGSGHGFDQVTSEHKSSDTGGWDSQEKMDKPWDK 1805
             E  + P+ + N      W  + +S   SG       +   S+D   W S +K     + 
Sbjct: 1644 SETELGPAAMGN------WDKK-KSDTKSG------PAAWGSTDAAAWGSSDK-----NN 1703

Query: 1806 QKSTQASESWGSQNDTQS----------SWGQPKKAPEEFSWGSQDDSNTQFSQLKPPET 1865
             ++   + +WGS+N   S          SWGQP    E+       D+N           
Sbjct: 1704 SETESDAAAWGSRNKKTSEIESGAGAWGSWGQPSPTAED------KDTN----------- 1763

Query: 1866 SLGWEQQKSPDVSHGWASHKESSEQTSSQGWDN--KKNQGSKGW-GGNAGEWKNRKNRPP 1925
                E  ++P VS      +E  ++  SQ W N  KK   S GW  G   +WK  +N  P
Sbjct: 1764 ----EDDRNPWVSLKETKSREKDDKERSQ-WGNPAKKFPSSGGWSNGGGADWKGNRNHTP 1823

Query: 1926 KSPGILNDDANVRGIYTASGQRLDMFTTEEQDILADIEPIMQSIRKVMHQSGYNDGDPLS 1985
            + P     + N+  ++TA+ QRLD FT+EEQ++L+D+EP+M+++RK+MH S Y DGDP+S
Sbjct: 1824 RPP---RSEDNLAPMFTATRQRLDSFTSEEQELLSDVEPVMRTLRKIMHPSAYPDGDPIS 1876

Query: 1986 AEDQSFVLESVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCFYVVTTDGHKEDFSYRKC 2034
             +D++FVLE + NFHP K  K+G+G+D   V +H+ F +SRCF+VV+TDG K+DFSYRK 
Sbjct: 1884 DDDKTFVLEKILNFHPQKETKLGSGVDFITVDKHTIFSDSRCFFVVSTDGAKQDFSYRKS 1876

BLAST of CmUC01G007470 vs. TAIR 10
Match: AT1G63020.1 (nuclear RNA polymerase D1A )

HSP 1 Score: 356.7 bits (914), Expect = 1.3e-97
Identity = 343/1322 (25.95%), Postives = 565/1322 (42.74%), Query Frame = 0

Query: 143  SQLSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHITELKKMLSLLCLK 202
            +Q+++  LGLP     C +CG+ +   CEGHFG I     I +P  + E+  +L+ +C  
Sbjct: 40   NQVTDSRLGLPNPDSVCRTCGSKDRKVCEGHFGVINFAYSIINPYFLKEVAALLNKICPG 99

Query: 203  CLKMKKTKFP------------SKNIGFAERLLSSCCEDASQVSIREAKKPDG------- 262
            C  ++K +F             + N G+             +V+ +E  +  G       
Sbjct: 100  CKYIRKKQFQITEDQPERCRYCTLNTGYPLMKF--------RVTTKEVFRRSGIVVEVNE 159

Query: 263  ASYLQLKVPSRSSLREGFWDFLERYGFRYGDNL---TRTLLPCEVKEMLKKIPNETRKKL 322
             S ++LK     +L   +W FL +        L    R +   +V  +L  I     KK 
Sbjct: 160  ESLMKLKKRGVLTLPPDYWSFLPQDSNIDESCLKPTRRIITHAQVYALLLGIDQRLIKK- 219

Query: 323  AGRGYYPQDGYI-LQYLPVPPNCLSVPEI---SDGVTVMSSDPAVSMLKKILKQVEIIKG 382
                  P    + L   PV PN   V EI    +G  ++  D    + KK++        
Sbjct: 220  ----DIPMFNSLGLTSFPVTPNGYRVTEIVHQFNGARLI-FDERTRIYKKLV-------- 279

Query: 383  SRSGAPNFESHEVEANDLQLAVDQYLQV-RGTVKASRGIDARFGVNKELNDPSTKAWLEK 442
                   FE + +E +   +   QY ++   TV +S+  D+     K+ + P     L  
Sbjct: 280  ------GFEGNTLELSSRVMECMQYSRLFSETVSSSK--DSANPYQKKSDTPKL-CGLRF 339

Query: 443  MRTLFIRKGSGFSSRSVITGDAYKLVSEIGVPFEVAQRITFEERVSVHN-----IKYLQE 502
            M+ + + K S  + R+V+ GD    ++EIG+P  +A+R+   E ++  N       ++  
Sbjct: 340  MKDVLLGKRSDHTFRTVVVGDPSLKLNEIGIPESIAKRLQVSEHLNQCNKERLVTSFVPT 399

Query: 503  LVDKKLCLTYRDGSSAYSLREGSTGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQA 562
            L+D K  +  R G    +++        L+ G  + R +MDGD V +NRPP+ H+HSL A
Sbjct: 400  LLDNKE-MHVRRGDRLVAIQVND-----LQTGDKIFRSLMDGDTVLMNRPPSIHQHSLIA 459

Query: 563  LRV-YLHDDHTVKINPLICGPLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHS 622
            + V  L     V +NP+ C P   DFDGDC+H + PQSI AK E+  L +++KQL++  +
Sbjct: 460  MTVRILPTTSVVSLNPICCLPFRGDFDGDCLHGYVPQSIQAKVELDELVALDKQLINRQN 519

Query: 623  GNLNLQLANDSLLS--LKMMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVHSESL--HWT 682
            G   L L  DSL +  L  + +  +L +A  QQL M+    LPPPA++     S    WT
Sbjct: 520  GRNLLSLGQDSLTAAYLVNVEKNCYLNRAQMQQLQMYCPFQLPPPAIIKASPSSTEPQWT 579

Query: 683  ALQILQTVLPACFDCHG--DSYLIKNSDFLKFD----FERDAMPSLVNEILTSIFFQKGP 742
             +Q+   + P  FD     ++ ++ N + L F     + RD   + +  +L      KG 
Sbjct: 580  GMQLFGMLFPPGFDYTYPLNNVVVSNGELLSFSEGSAWLRDGEGNFIERLLK---HDKG- 639

Query: 743  EEVLRFFDSLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQKNIQVISPLLYQLR----- 802
             +VL    S Q +L + +   G SV L D    +     LQ    +   + Y LR     
Sbjct: 640  -KVLDIIYSAQEMLSQWLLMRGLSVSLAD----LYLSSDLQSRKNLTEEISYGLREAEQV 699

Query: 803  ----------------------------------------STFNELVELQLENHIRSVKV 862
                                                    +T +EL     ++  R V+ 
Sbjct: 700  CNKQQLMVESWRDFLAVNGEDKEEDSVSDLARFCYERQKSATLSELAVSAFKDAYRDVQA 759

Query: 863  PFTNFILKLSSLGKLFDSKSDSAINKVVQQIGFLGLQLSDKGKFY------SKTLIEDVA 922
                +  + +S   +  + S   I K+VQ    +GLQ S     +      +     D  
Sbjct: 760  LAYRYGDQSNSFLIMSKAGSKGNIGKLVQHSMCIGLQNSAVSLSFGFPRELTCAAWNDPN 819

Query: 923  SLFHNRYSSDKIDYPS-AEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTL 982
            S        D     S   +G+++  F  GL+P E  VHS+++R+     +  L  PGTL
Sbjct: 820  SPLRGAKGKDSTTTESYVPYGVIENSFLTGLNPLESFVHSVTSRDSSFSGNADL--PGTL 879

Query: 983  FKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGIKAGMMQPYSLFPPGEPVGVLAATAMS 1042
             + LM  +RD+   YDGTVRN   N ++Q  Y    G ++  +    GE +G L+A A+S
Sbjct: 880  SRRLMFFMRDIYAAYDGTVRNSFGNQLVQFTYETD-GPVEDIT----GEALGSLSACALS 939

Query: 1043 NPAYKA------VLDSTPSSNSSWDMMKEILLCKVSFKNEPIDRRVILYLNNCDCGRKYC 1102
              AY A      +L+++P  N     +K +L C    K    ++ + LYL+     +K+ 
Sbjct: 940  EAAYSALDQPISLLETSPLLN-----LKNVLEC--GSKKGQREQTMSLYLSEYLSKKKHG 999

Query: 1103 NENAAYVVKSHLKKVTLKDAAVDFMIEYN-RQPTPSGLGPGLVGHVHLNKMLLKELKISM 1162
             E  +  +K+HL+K++  +     MI ++    T   L P  V H H+++ +LK  ++S 
Sbjct: 1000 FEYGSLEIKNHLEKLSFSEIVSTSMIIFSPSSNTKVPLSP-WVCHFHISEKVLKRKQLSA 1059

Query: 1163 TEVLRRCQETISSFKKKKKKIAHALRFSISEHCSFHQWNGEEST---------------- 1222
              V+    E   S  ++ K     L    + HCS      ++                  
Sbjct: 1060 ESVVSSLNEQYKSRNRELKLDIVDLDIQNTNHCSSDDQAMKDDNVCITVTVVEASKHSVL 1119

Query: 1223 --------------DMPC--DPRISSANVIWISPDSTSWQKNPSRWQDGELALDVCLEKS 1282
                          D P   D  I   N++W   D     K       GEL L V +   
Sbjct: 1120 ELDAIRLVLIPFLLDSPVKGDQGIKKVNILW--TDRPKAPKRNGNHLAGELYLKVTMYGD 1179

Query: 1283 AVKQNGDAWRNVLDCCLPVMHLIDTSRSVPYAIKQVQELLGISCAFDQMIQRLSKSVSMV 1331
              K+N   W  +L+ CLP+M +ID  RS P  I+Q   + GI       +  L  +VS  
Sbjct: 1180 RGKRN--CWTALLETCLPIMDMIDWGRSHPDNIRQCCSVYGIDAGRSIFVANLESAVSDT 1239

BLAST of CmUC01G007470 vs. TAIR 10
Match: AT1G63020.2 (nuclear RNA polymerase D1A )

HSP 1 Score: 356.7 bits (914), Expect = 1.3e-97
Identity = 343/1322 (25.95%), Postives = 565/1322 (42.74%), Query Frame = 0

Query: 143  SQLSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHITELKKMLSLLCLK 202
            +Q+++  LGLP     C +CG+ +   CEGHFG I     I +P  + E+  +L+ +C  
Sbjct: 40   NQVTDSRLGLPNPDSVCRTCGSKDRKVCEGHFGVINFAYSIINPYFLKEVAALLNKICPG 99

Query: 203  CLKMKKTKFP------------SKNIGFAERLLSSCCEDASQVSIREAKKPDG------- 262
            C  ++K +F             + N G+             +V+ +E  +  G       
Sbjct: 100  CKYIRKKQFQITEDQPERCRYCTLNTGYPLMKF--------RVTTKEVFRRSGIVVEVNE 159

Query: 263  ASYLQLKVPSRSSLREGFWDFLERYGFRYGDNL---TRTLLPCEVKEMLKKIPNETRKKL 322
             S ++LK     +L   +W FL +        L    R +   +V  +L  I     KK 
Sbjct: 160  ESLMKLKKRGVLTLPPDYWSFLPQDSNIDESCLKPTRRIITHAQVYALLLGIDQRLIKK- 219

Query: 323  AGRGYYPQDGYI-LQYLPVPPNCLSVPEI---SDGVTVMSSDPAVSMLKKILKQVEIIKG 382
                  P    + L   PV PN   V EI    +G  ++  D    + KK++        
Sbjct: 220  ----DIPMFNSLGLTSFPVTPNGYRVTEIVHQFNGARLI-FDERTRIYKKLV-------- 279

Query: 383  SRSGAPNFESHEVEANDLQLAVDQYLQV-RGTVKASRGIDARFGVNKELNDPSTKAWLEK 442
                   FE + +E +   +   QY ++   TV +S+  D+     K+ + P     L  
Sbjct: 280  ------GFEGNTLELSSRVMECMQYSRLFSETVSSSK--DSANPYQKKSDTPKL-CGLRF 339

Query: 443  MRTLFIRKGSGFSSRSVITGDAYKLVSEIGVPFEVAQRITFEERVSVHN-----IKYLQE 502
            M+ + + K S  + R+V+ GD    ++EIG+P  +A+R+   E ++  N       ++  
Sbjct: 340  MKDVLLGKRSDHTFRTVVVGDPSLKLNEIGIPESIAKRLQVSEHLNQCNKERLVTSFVPT 399

Query: 503  LVDKKLCLTYRDGSSAYSLREGSTGHTYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQA 562
            L+D K  +  R G    +++        L+ G  + R +MDGD V +NRPP+ H+HSL A
Sbjct: 400  LLDNKE-MHVRRGDRLVAIQVND-----LQTGDKIFRSLMDGDTVLMNRPPSIHQHSLIA 459

Query: 563  LRV-YLHDDHTVKINPLICGPLSADFDGDCIHLFYPQSIAAKAEVLGLFSVEKQLLSSHS 622
            + V  L     V +NP+ C P   DFDGDC+H + PQSI AK E+  L +++KQL++  +
Sbjct: 460  MTVRILPTTSVVSLNPICCLPFRGDFDGDCLHGYVPQSIQAKVELDELVALDKQLINRQN 519

Query: 623  GNLNLQLANDSLLS--LKMMFRKYFLGKAAAQQLAMFVSSYLPPPALLGVHSESL--HWT 682
            G   L L  DSL +  L  + +  +L +A  QQL M+    LPPPA++     S    WT
Sbjct: 520  GRNLLSLGQDSLTAAYLVNVEKNCYLNRAQMQQLQMYCPFQLPPPAIIKASPSSTEPQWT 579

Query: 683  ALQILQTVLPACFDCHG--DSYLIKNSDFLKFD----FERDAMPSLVNEILTSIFFQKGP 742
             +Q+   + P  FD     ++ ++ N + L F     + RD   + +  +L      KG 
Sbjct: 580  GMQLFGMLFPPGFDYTYPLNNVVVSNGELLSFSEGSAWLRDGEGNFIERLLK---HDKG- 639

Query: 743  EEVLRFFDSLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQKNIQVISPLLYQLR----- 802
             +VL    S Q +L + +   G SV L D    +     LQ    +   + Y LR     
Sbjct: 640  -KVLDIIYSAQEMLSQWLLMRGLSVSLAD----LYLSSDLQSRKNLTEEISYGLREAEQV 699

Query: 803  ----------------------------------------STFNELVELQLENHIRSVKV 862
                                                    +T +EL     ++  R V+ 
Sbjct: 700  CNKQQLMVESWRDFLAVNGEDKEEDSVSDLARFCYERQKSATLSELAVSAFKDAYRDVQA 759

Query: 863  PFTNFILKLSSLGKLFDSKSDSAINKVVQQIGFLGLQLSDKGKFY------SKTLIEDVA 922
                +  + +S   +  + S   I K+VQ    +GLQ S     +      +     D  
Sbjct: 760  LAYRYGDQSNSFLIMSKAGSKGNIGKLVQHSMCIGLQNSAVSLSFGFPRELTCAAWNDPN 819

Query: 923  SLFHNRYSSDKIDYPS-AEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTL 982
            S        D     S   +G+++  F  GL+P E  VHS+++R+     +  L  PGTL
Sbjct: 820  SPLRGAKGKDSTTTESYVPYGVIENSFLTGLNPLESFVHSVTSRDSSFSGNADL--PGTL 879

Query: 983  FKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGIKAGMMQPYSLFPPGEPVGVLAATAMS 1042
             + LM  +RD+   YDGTVRN   N ++Q  Y    G ++  +    GE +G L+A A+S
Sbjct: 880  SRRLMFFMRDIYAAYDGTVRNSFGNQLVQFTYETD-GPVEDIT----GEALGSLSACALS 939

Query: 1043 NPAYKA------VLDSTPSSNSSWDMMKEILLCKVSFKNEPIDRRVILYLNNCDCGRKYC 1102
              AY A      +L+++P  N     +K +L C    K    ++ + LYL+     +K+ 
Sbjct: 940  EAAYSALDQPISLLETSPLLN-----LKNVLEC--GSKKGQREQTMSLYLSEYLSKKKHG 999

Query: 1103 NENAAYVVKSHLKKVTLKDAAVDFMIEYN-RQPTPSGLGPGLVGHVHLNKMLLKELKISM 1162
             E  +  +K+HL+K++  +     MI ++    T   L P  V H H+++ +LK  ++S 
Sbjct: 1000 FEYGSLEIKNHLEKLSFSEIVSTSMIIFSPSSNTKVPLSP-WVCHFHISEKVLKRKQLSA 1059

Query: 1163 TEVLRRCQETISSFKKKKKKIAHALRFSISEHCSFHQWNGEEST---------------- 1222
              V+    E   S  ++ K     L    + HCS      ++                  
Sbjct: 1060 ESVVSSLNEQYKSRNRELKLDIVDLDIQNTNHCSSDDQAMKDDNVCITVTVVEASKHSVL 1119

Query: 1223 --------------DMPC--DPRISSANVIWISPDSTSWQKNPSRWQDGELALDVCLEKS 1282
                          D P   D  I   N++W   D     K       GEL L V +   
Sbjct: 1120 ELDAIRLVLIPFLLDSPVKGDQGIKKVNILW--TDRPKAPKRNGNHLAGELYLKVTMYGD 1179

Query: 1283 AVKQNGDAWRNVLDCCLPVMHLIDTSRSVPYAIKQVQELLGISCAFDQMIQRLSKSVSMV 1331
              K+N   W  +L+ CLP+M +ID  RS P  I+Q   + GI       +  L  +VS  
Sbjct: 1180 RGKRN--CWTALLETCLPIMDMIDWGRSHPDNIRQCCSVYGIDAGRSIFVANLESAVSDT 1239

BLAST of CmUC01G007470 vs. TAIR 10
Match: AT4G35800.1 (RNA polymerase II large subunit )

HSP 1 Score: 202.6 bits (514), Expect = 3.0e-51
Identity = 215/873 (24.63%), Postives = 367/873 (42.04%), Query Frame = 0

Query: 145 LSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHITELKKMLSLLCLKCL 204
           LS+  LG      KCE+C  +   +C GHFGY+EL  P+YH   +  +  ++  +C  C 
Sbjct: 52  LSDTRLGTIDRKVKCETC-MANMAECPGHFGYLELAKPMYHVGFMKTVLSIMRCVCFNCS 111

Query: 205 KM------------KKTKFPSKNIGFAERLLSSC-----CEDASQVS----------IRE 264
           K+             K K P   +   +++L +C     C+    +           +++
Sbjct: 112 KILADEEEHKFKQAMKIKNPKNRL---KKILDACKNKTKCDGGDDIDDVQSHSTDEPVKK 171

Query: 265 AKKPDGASYLQLKVPSRSSLREGFWDFLERYGFRYGDNL------TRTLLPCEVKEMLKK 324
           ++   GA   +L +     + E     ++R      D L       +TL    V  +LK+
Sbjct: 172 SRGGCGAQQPKLTIEGMKMIAE---YKIQRKKNDEPDQLPEPAERKQTLGADRVLSVLKR 231

Query: 325 IPNETRKKLAGRGYYPQ----DGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKI 384
           I +   + L   G+ P+    D  IL+ LP+PP  +  P +    T  S D     L  I
Sbjct: 232 ISDADCQLL---GFNPKFARPDWMILEVLPIPPPPVR-PSVMMDATSRSEDDLTHQLAMI 291

Query: 385 LKQVEIIK-GSRSGAPNFESHEVEANDLQLAVDQYL------QVRGTVKASRGIDARFGV 444
           ++  E +K   ++GAP     E     LQ  +  Y       Q R T K+ R I +    
Sbjct: 292 IRHNENLKRQEKNGAPAHIISEF-TQLLQFHIATYFDNELPGQPRATQKSGRPIKSICS- 351

Query: 445 NKELNDPSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVSEIGVPFEVAQRITFEERV 504
                    KA   ++R   + K   FS+R+VIT D    + E+GVP+ +A  +T+ E V
Sbjct: 352 -------RLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETV 411

Query: 505 SVHNIKYLQELVD-------KKLCLTY--RDGSSAYSLRE-GSTGHTYLKPGQIVHRRIM 564
           + +NI+ L+ELVD        K    Y  RD      LR    +   +L+ G  V R + 
Sbjct: 412 TPYNIERLKELVDYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLQ 471

Query: 565 DGDIVFINRPPTTHKHSLQALRVYLHDDHTVKINPLICGPLSADFDGDCIHLFYPQSIAA 624
           DGD V  NR P+ HK S+   R+ +    T ++N  +  P +ADFDGD +++  PQS   
Sbjct: 472 DGDFVLFNRQPSLHKMSIMGHRIRIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFET 531

Query: 625 KAEVLGLFSVEKQLLSSHSGNLNLQLANDSLLSL-KMMFRKYFLGKAAAQQLAMFVSSY- 684
           +AEVL L  V K ++S  +    + +  D+LL   K+  R  F+ K       M+   + 
Sbjct: 532 RAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNTLMWWEDFD 591

Query: 685 --LPPPALLGVHSESLHWTALQILQTVLP----------------ACFDCHGDSYL-IKN 744
             +P PA+L        WT  Q+   ++P                  F   GD+ + I+ 
Sbjct: 592 GKVPAPAIL---KPRPLWTGKQVFNLIIPKQINLLRYSAWHADTETGFITPGDTQVRIER 651

Query: 745 SDFLKFDFERDAMPSLVNEILTSIFFQKGPEEVLRFFDSLQPLLMEHIFSEGFSVGLDDY 804
            + L     +  + +    ++  I+ + GP+   +F    Q L+   +   GF++G+ D 
Sbjct: 652 GELLAGTLCKKTLGTSNGSLVHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFTIGIGDT 711

Query: 805 SMPMAFLQALQKNIQ----VISPLLYQ-------------LRSTFNELVELQLENHIRSV 864
               + ++ + + I      +  L+ Q             +R TF   V   L       
Sbjct: 712 IADSSTMEKINETISNAKTAVKDLIRQFQGKELDPEPGRTMRDTFENRVNQVLNKARDDA 771

Query: 865 KVPFTNFILKLSSLGKLFDSKSDSAINKVVQQIGFLGLQLSDKGK-----FYSKTLIEDV 921
                  + + ++L  +  + S  +   + Q    +G Q + +GK     F  +TL    
Sbjct: 772 GSSAQKSLAETNNLKAMVTAGSKGSFINISQMTACVG-QQNVEGKRIPFGFDGRTL---- 831

BLAST of CmUC01G007470 vs. TAIR 10
Match: AT5G60040.1 (nuclear RNA polymerase C1 )

HSP 1 Score: 129.0 bits (323), Expect = 4.2e-29
Identity = 140/560 (25.00%), Postives = 240/560 (42.86%), Query Frame = 0

Query: 145 LSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHITELKKMLSLLCLKC- 204
           L +P +G P +   C +C       C GH+GY++L +P+Y+  +   +  +L  +C +C 
Sbjct: 61  LLDPRMGPPNKKSICTTC-EGNFQNCPGHYGYLKLDLPVYNVGYFNFILDILKCICKRCS 120

Query: 205 -------------LKMKKTKF-PSKNIGFAERLLSSCCEDASQVSIREAKKPDGASYLQL 264
                         KM+  +  P K    A+ ++  C   ASQ  I   KK    + +  
Sbjct: 121 NMLLDEKLYEDHLRKMRNPRMEPLKKTELAKAVVKKCSTMASQ-RIITCKKCGYLNGMVK 180

Query: 265 KVPS---------RSSLREGFWDFLE------RYGFRYGDNLTRTLLPCEVKEMLKKIPN 324
           K+ +         RS +  G  D  +      +      + LT  L P  V  + K++ +
Sbjct: 181 KIAAQFGIGISHDRSKIHGGEIDECKSAISHTKQSTAAINPLTYVLDPNLVLGLFKRMSD 240

Query: 325 ETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEII 384
           +  + L     Y  +  I+  + VPP  +    +  G+    +D    + + IL    + 
Sbjct: 241 KDCELLYIA--YRPENLIITCMLVPPLSIRPSVMIGGIQSNENDLTARLKQIILGNASLH 300

Query: 385 KGSRSGAPNFESHEVEANDLQLAVDQYL--QVRGTVKASRGIDARFGVNKELNDPSTKAW 444
           K       + ++ +V  + +Q+ V +Y+  +VRG            G+ + L     K  
Sbjct: 301 KILSQPTSSPKNMQV-WDTVQIEVARYINSEVRGCQNQPEE-HPLSGILQRL-----KGK 360

Query: 445 LEKMRTLFIRKGSGFSSRSVITGDAYKLVSEIGVPFEVAQRITFEERVSVHNIKYLQELV 504
             + R     K   F+ R+VI+ D    ++E+G+P  +AQ +TF E VS HNI+ L++ V
Sbjct: 361 GGRFRANLSGKRVEFTGRTVISPDPNLKITEVGIPILMAQILTFPECVSRHNIEKLRQCV 420

Query: 505 DK-------KLCLTYRDGSSA-----YSLREGSTGHTYLKPGQIVHRRIMDGDIVFINRP 564
                       + Y DGSS      Y  R        L  G IV R + +GD+V  NR 
Sbjct: 421 RNGPNKYPGARNVRYPDGSSRTLVGDYRKRIADE----LAIGCIVDRHLQEGDVVLFNRQ 480

Query: 565 PTTHKHSLQALRVYLHDDHTVKINPLICGPLSADFDGDCIHLFYPQSIAAKAEVLGLFSV 624
           P+ H+ S+   R  +    T++ N  +C P +ADFDGD +++  PQ+  A+ E + L  V
Sbjct: 481 PSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGV 540

Query: 625 EKQLLSSHSGNLNLQLANDSLLSLKMMFRK-YFLGKAAAQQLAMFV-----SSYLPPPAL 655
           +  L +  +G + +    D L S  ++ RK  F  +AA   +  ++     S  LP P +
Sbjct: 541 QNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLICSYMGDGMDSIDLPTPTI 600

HSP 2 Score: 49.7 bits (117), Expect = 3.3e-05
Identity = 28/78 (35.90%), Postives = 42/78 (53.85%), Query Frame = 0

Query: 843 PSAEFGLVKGCFFHGLDPYEEMVHSISTREVMVRSSRGLTEPGTLFKNLMAILRDVVICY 902
           P+A+ G V   F+ GL   E   H++  RE +V ++      G + + LM  L D+++ Y
Sbjct: 829 PAAK-GFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHY 888

Query: 903 DGTVRNVCSNSIIQLEYG 921
           D TVRN  S  I+Q  YG
Sbjct: 889 DNTVRN-ASGCILQFTYG 904