CmUC01G007330 (gene) Watermelon (USVL531) v1

Overview
NameCmUC01G007330
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionIleal sodium/bile acid cotransporter, putative
LocationCmU531Chr01: 7888965 .. 7889441 (+)
RNA-Seq ExpressionCmUC01G007330
SyntenyCmUC01G007330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATCAAGTTCACAGCAAATTTCCCTAAATATGAATGAATTTCATTCCTTCATCACAGCAATTAATGAAAGAAATCCTGGAATCAACAGCTTACCAATTTGTATCATAATGCAGAGGCCTCCACCAGCCAACAGCTCTGAGACTCAGAATAATCTTGGGAAGACAATTCTTGGCCTTACTTTTCAGGCAGTTTTAGCCTTGTTCATTAGCACACCCAGTTCATCCCCTCCATTTTTGACACATCTCTTTGGTGCTGCAGTCTTGATTAGCTTTGCAGTTTCATTTGCTGGACTTTTCCTTCAAAATGCATTCCCGAGAATCGCACTTTTGTTTGGAAAGATCGGTGCTCTTATCGCTGCAATTGGTGTGTGCATCATAGCAAGTCTTCTTCTAATCCATCAGAACTTTGCCTGGATCTCTTGGCTGGCATGTGGCTTGTCCTTGATGGCTTTTATTCTATCATTTAAAGGGTAG

mRNA sequence

ATGGAATCAAGTTCACAGCAAATTTCCCTAAATATGAATGAATTTCATTCCTTCATCACAGCAATTAATGAAAGAAATCCTGGAATCAACAGCTTACCAATTTGTATCATAATGCAGAGGCCTCCACCAGCCAACAGCTCTGAGACTCAGAATAATCTTGGGAAGACAATTCTTGGCCTTACTTTTCAGGCAGTTTTAGCCTTGTTCATTAGCACACCCAGTTCATCCCCTCCATTTTTGACACATCTCTTTGGTGCTGCAGTCTTGATTAGCTTTGCAGTTTCATTTGCTGGACTTTTCCTTCAAAATGCATTCCCGAGAATCGCACTTTTGTTTGGAAAGATCGGTGCTCTTATCGCTGCAATTGGTGTGTGCATCATAGCAAGTCTTCTTCTAATCCATCAGAACTTTGCCTGGATCTCTTGGCTGGCATGTGGCTTGTCCTTGATGGCTTTTATTCTATCATTTAAAGGGTAG

Coding sequence (CDS)

ATGGAATCAAGTTCACAGCAAATTTCCCTAAATATGAATGAATTTCATTCCTTCATCACAGCAATTAATGAAAGAAATCCTGGAATCAACAGCTTACCAATTTGTATCATAATGCAGAGGCCTCCACCAGCCAACAGCTCTGAGACTCAGAATAATCTTGGGAAGACAATTCTTGGCCTTACTTTTCAGGCAGTTTTAGCCTTGTTCATTAGCACACCCAGTTCATCCCCTCCATTTTTGACACATCTCTTTGGTGCTGCAGTCTTGATTAGCTTTGCAGTTTCATTTGCTGGACTTTTCCTTCAAAATGCATTCCCGAGAATCGCACTTTTGTTTGGAAAGATCGGTGCTCTTATCGCTGCAATTGGTGTGTGCATCATAGCAAGTCTTCTTCTAATCCATCAGAACTTTGCCTGGATCTCTTGGCTGGCATGTGGCTTGTCCTTGATGGCTTTTATTCTATCATTTAAAGGGTAG

Protein sequence

MESSSQQISLNMNEFHSFITAINERNPGINSLPICIIMQRPPPANSSETQNNLGKTILGLTFQAVLALFISTPSSSPPFLTHLFGAAVLISFAVSFAGLFLQNAFPRIALLFGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGLSLMAFILSFKG
Homology
BLAST of CmUC01G007330 vs. NCBI nr
Match: KGN49803.1 (hypothetical protein Csa_004681 [Cucumis sativus])

HSP 1 Score: 240.0 bits (611), Expect = 1.4e-59
Identity = 127/158 (80.38%), Postives = 142/158 (89.87%), Query Frame = 0

Query: 1   MESSSQQISLNMNEFHSFITAINERNPGINSLPICIIMQRPPPANSSETQNNLGKTILGL 60
           MESSSQQIS++MN  +S IT+INERNP IN LPICIIMQ   PANSS+T+NN+G TILGL
Sbjct: 1   MESSSQQISIDMNHLYSLITSINERNPEINGLPICIIMQTASPANSSKTENNVGTTILGL 60

Query: 61  TFQAVLALFISTPSSSPPFLTHLFGAAVLISFAVSFAGLFLQNAFPRIALLFGKIGALIA 120
           TFQAVLALFI++ +SSPP LTHLFGAAVLISFAVSF G+FLQ+ FPRIALLF KIGALIA
Sbjct: 61  TFQAVLALFITSSTSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPRIALLFEKIGALIA 120

Query: 121 AIGVCIIASLLLIHQNFAWISWLACGLSLMAFILSFKG 159
           AIGVCI+AS LLIHQNFAWISWLACG SLMAF+LSF+G
Sbjct: 121 AIGVCILAS-LLIHQNFAWISWLACGFSLMAFLLSFRG 157

BLAST of CmUC01G007330 vs. NCBI nr
Match: KAA0050246.1 (putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ98160.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa])

HSP 1 Score: 239.2 bits (609), Expect = 2.4e-59
Identity = 125/147 (85.03%), Postives = 136/147 (92.52%), Query Frame = 0

Query: 12  MNEFHSFITAINERNPGINSLPICIIMQRPPPANSSETQNNLGKTILGLTFQAVLALFIS 71
           MNE +SFITAINERNP INSLPICI MQRP PANSS+T+NN+GKTILGLTFQAVLALFI+
Sbjct: 1   MNELYSFITAINERNPEINSLPICITMQRPSPANSSKTENNVGKTILGLTFQAVLALFIT 60

Query: 72  TPSSSPPFLTHLFGAAVLISFAVSFAGLFLQNAFPRIALLFGKIGALIAAIGVCIIASLL 131
           +P+SSPP LTHLF AAVLISFAVSFAG+FLQN FPRIALLF KIGALIAAIGVCI+AS L
Sbjct: 61  SPNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPRIALLFEKIGALIAAIGVCIVAS-L 120

Query: 132 LIHQNFAWISWLACGLSLMAFILSFKG 159
           LIHQNFAWISWLA G SLMAF+LSF+G
Sbjct: 121 LIHQNFAWISWLASGFSLMAFVLSFRG 146

BLAST of CmUC01G007330 vs. NCBI nr
Match: KAG6579137.1 (hypothetical protein SDJN03_23585, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 170.2 bits (430), Expect = 1.4e-38
Identity = 94/157 (59.87%), Postives = 118/157 (75.16%), Query Frame = 0

Query: 1   MESSSQQISLNMNEFHSFITAINERNPGINSLPICIIMQRPPPANSSETQNNLGKTILGL 60
           M S+ Q +S++MN+F   I   ++  P   ++P     + PPP +SS+T+NNLGK + GL
Sbjct: 1   MGSTPQHVSIDMNQFCP-IQGASDGLPPTTAMP-----RPPPPPDSSQTRNNLGKIVFGL 60

Query: 61  TFQAVLALFISTPSSSPPFLTHLFGAAVLISFAVSFAGLFLQNAFPRIALLFGKIGALIA 120
           TFQAVLALFIS P+S PP L H+F AA+LISFA+S A LFLQ A+PRIAL  GKIGAL+A
Sbjct: 61  TFQAVLALFISPPTSCPPLLMHIFAAAMLISFALSLAALFLQIAYPRIALSSGKIGALLA 120

Query: 121 AIGVCIIASLLLIHQNFAWISWLACGLSLMAFILSFK 158
           AIG C I S+LL HQ+F+WI WLACG +LMAFILSFK
Sbjct: 121 AIGACTITSVLLKHQHFSWIPWLACGFALMAFILSFK 151

BLAST of CmUC01G007330 vs. NCBI nr
Match: KGN49808.1 (hypothetical protein Csa_004650 [Cucumis sativus])

HSP 1 Score: 168.3 bits (425), Expect = 5.3e-38
Identity = 97/165 (58.79%), Postives = 117/165 (70.91%), Query Frame = 0

Query: 1   MESSSQQISLNMNEFHSFITAINERNPGI-------NSLPICIIMQRPPPANSSETQNNL 60
           M S+S Q SL+M+ F SFI  I++RN G+       N LP+ I MQ+ P A +  +Q  L
Sbjct: 1   MASTSHQTSLDMSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQSPQATADSSQ-KL 60

Query: 61  GKTILGLTFQAVLALFIST-PSSSPPFLTHLFGAAVLISFAVSFAGLFLQNAFPRIALLF 120
           GK IL L+FQAVLALFIS+ P+S PP L H F AAV ISFAVSFA LFL N+FPR A LF
Sbjct: 61  GKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTAHLF 120

Query: 121 GKIGALIAAIGVCIIASLLLIHQNFAWISWLACGLSLMAFILSFK 158
            K+GAL +A GVC IAS LL+HQNFAWI W+AC  S++ F LSFK
Sbjct: 121 EKVGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK 164

BLAST of CmUC01G007330 vs. NCBI nr
Match: KAG6579136.1 (hypothetical protein SDJN03_23584, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 162.5 bits (410), Expect = 2.9e-36
Identity = 92/157 (58.60%), Postives = 113/157 (71.97%), Query Frame = 0

Query: 1   MESSSQQISLNMNEFHSFITAINERNPGINSLPICIIMQRPPPANSSETQNNLGKTILGL 60
           M S+ Q +S++MN+F S    I   + G++  P              + +NNLGK + GL
Sbjct: 1   MGSTPQHVSIDMNQFSS----IQGASDGLHREP--------------QARNNLGKIVFGL 60

Query: 61  TFQAVLALFISTPSSSPPFLTHLFGAAVLISFAVSFAGLFLQNAFPRIALLFGKIGALIA 120
           TFQAVLALFISTP+S PP L +LF AA+LIS A+S A LFLQ AFPRIAL FGKIGA++A
Sbjct: 61  TFQAVLALFISTPTSFPPLLINLFAAAMLISLALSLAALFLQTAFPRIALSFGKIGAMLA 120

Query: 121 AIGVCIIASLLLIHQNFAWISWLACGLSLMAFILSFK 158
           A+G CI+ASLLL HQNF+WI WLACG +LMAFILSFK
Sbjct: 121 AVGACIMASLLLKHQNFSWIPWLACGFALMAFILSFK 139

BLAST of CmUC01G007330 vs. ExPASy TrEMBL
Match: A0A0A0KJN8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136870 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 6.9e-60
Identity = 127/158 (80.38%), Postives = 142/158 (89.87%), Query Frame = 0

Query: 1   MESSSQQISLNMNEFHSFITAINERNPGINSLPICIIMQRPPPANSSETQNNLGKTILGL 60
           MESSSQQIS++MN  +S IT+INERNP IN LPICIIMQ   PANSS+T+NN+G TILGL
Sbjct: 1   MESSSQQISIDMNHLYSLITSINERNPEINGLPICIIMQTASPANSSKTENNVGTTILGL 60

Query: 61  TFQAVLALFISTPSSSPPFLTHLFGAAVLISFAVSFAGLFLQNAFPRIALLFGKIGALIA 120
           TFQAVLALFI++ +SSPP LTHLFGAAVLISFAVSF G+FLQ+ FPRIALLF KIGALIA
Sbjct: 61  TFQAVLALFITSSTSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPRIALLFEKIGALIA 120

Query: 121 AIGVCIIASLLLIHQNFAWISWLACGLSLMAFILSFKG 159
           AIGVCI+AS LLIHQNFAWISWLACG SLMAF+LSF+G
Sbjct: 121 AIGVCILAS-LLIHQNFAWISWLACGFSLMAFLLSFRG 157

BLAST of CmUC01G007330 vs. ExPASy TrEMBL
Match: A0A5A7U7U1 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00420 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.2e-59
Identity = 125/147 (85.03%), Postives = 136/147 (92.52%), Query Frame = 0

Query: 12  MNEFHSFITAINERNPGINSLPICIIMQRPPPANSSETQNNLGKTILGLTFQAVLALFIS 71
           MNE +SFITAINERNP INSLPICI MQRP PANSS+T+NN+GKTILGLTFQAVLALFI+
Sbjct: 1   MNELYSFITAINERNPEINSLPICITMQRPSPANSSKTENNVGKTILGLTFQAVLALFIT 60

Query: 72  TPSSSPPFLTHLFGAAVLISFAVSFAGLFLQNAFPRIALLFGKIGALIAAIGVCIIASLL 131
           +P+SSPP LTHLF AAVLISFAVSFAG+FLQN FPRIALLF KIGALIAAIGVCI+AS L
Sbjct: 61  SPNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPRIALLFEKIGALIAAIGVCIVAS-L 120

Query: 132 LIHQNFAWISWLACGLSLMAFILSFKG 159
           LIHQNFAWISWLA G SLMAF+LSF+G
Sbjct: 121 LIHQNFAWISWLASGFSLMAFVLSFRG 146

BLAST of CmUC01G007330 vs. ExPASy TrEMBL
Match: A0A0A0KJP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G137410 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 2.5e-38
Identity = 97/165 (58.79%), Postives = 117/165 (70.91%), Query Frame = 0

Query: 1   MESSSQQISLNMNEFHSFITAINERNPGI-------NSLPICIIMQRPPPANSSETQNNL 60
           M S+S Q SL+M+ F SFI  I++RN G+       N LP+ I MQ+ P A +  +Q  L
Sbjct: 1   MASTSHQTSLDMSAFSSFIRTISQRNYGLGCCCTPSNCLPVFIRMQQSPQATADSSQ-KL 60

Query: 61  GKTILGLTFQAVLALFIST-PSSSPPFLTHLFGAAVLISFAVSFAGLFLQNAFPRIALLF 120
           GK IL L+FQAVLALFIS+ P+S PP L H F AAV ISFAVSFA LFL N+FPR A LF
Sbjct: 61  GKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTAHLF 120

Query: 121 GKIGALIAAIGVCIIASLLLIHQNFAWISWLACGLSLMAFILSFK 158
            K+GAL +A GVC IAS LL+HQNFAWI W+AC  S++ F LSFK
Sbjct: 121 EKVGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK 164

BLAST of CmUC01G007330 vs. ExPASy TrEMBL
Match: A0A6J1CY58 (uncharacterized protein LOC111015658 OS=Momordica charantia OX=3673 GN=LOC111015658 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.1e-30
Identity = 86/127 (67.72%), Postives = 94/127 (74.02%), Query Frame = 0

Query: 1   MESSSQQISLNMNEFHSFITAINERNPGINS-------------LPICIIMQRPPPANSS 60
           M S+ QQ S++MN   SFITAINERN GI+S             LPICI MQRPPPA SS
Sbjct: 1   MASTPQQTSVDMNALSSFITAINERNLGISSFTWGGGTSTPSDCLPICIRMQRPPPAKSS 60

Query: 61  ETQNNLGKTILGLTFQAVLALFISTPSSSPPFLTHLFGAAVLISFAVSFAGLFLQNAFPR 115
           +   +LGKTILGLTFQAVLALFIS PSS P   T LFGAAVLISFAVSFAGLFLQ A+PR
Sbjct: 61  Q---SLGKTILGLTFQAVLALFISLPSSPPQLPTLLFGAAVLISFAVSFAGLFLQTAYPR 120

BLAST of CmUC01G007330 vs. ExPASy TrEMBL
Match: A0A5D3BEH8 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00440 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 2.0e-30
Identity = 86/166 (51.81%), Postives = 104/166 (62.65%), Query Frame = 0

Query: 2   ESSSQQISLNMNEFHSFITAINERNPGINS----------LPICIIMQRPPPANSSETQN 61
           E+   +ISL+MNE +SFITA+  RNPGI+S          LPI I MQRP P NS +   
Sbjct: 3   ETKPHEISLDMNELYSFITAVTNRNPGISSCTWGTAASDCLPIYIKMQRPSPVNSPQ--- 62

Query: 62  NLGKTILGLTFQAVLALFISTPSSSPPFLTHLFGAAVLISFAVSFAGLFLQNAFPRIALL 121
             G T +   FQA+L LF++ P S PP L+ L G  +L +F  SF G+ LQ  FP+IA L
Sbjct: 63  -FGNTFVSSNFQAILGLFLNLPPSPPP-LSELIGTVMLTAFVFSFCGVLLQKPFPKIAHL 122

Query: 122 FGKIGALIAAIGVCIIASLLLIHQNFAWISWLACGLSLMAFILSFK 158
               GAL+AAIGVCI+ S LL H N  WI WLACGL L AFI SFK
Sbjct: 123 LQMFGALLAAIGVCIMGSPLL-HPNLTWIRWLACGLILPAFITSFK 162

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN49803.11.4e-5980.38hypothetical protein Csa_004681 [Cucumis sativus][more]
KAA0050246.12.4e-5985.03putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ981... [more]
KAG6579137.11.4e-3859.87hypothetical protein SDJN03_23585, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN49808.15.3e-3858.79hypothetical protein Csa_004650 [Cucumis sativus][more]
KAG6579136.12.9e-3658.60hypothetical protein SDJN03_23584, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KJN86.9e-6080.38Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136870 PE=4 SV=1[more]
A0A5A7U7U11.2e-5985.03Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=119... [more]
A0A0A0KJP22.5e-3858.79Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G137410 PE=4 SV=1[more]
A0A6J1CY581.1e-3067.72uncharacterized protein LOC111015658 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A5D3BEH82.0e-3051.81Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=119... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC01G007330.1CmUC01G007330.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane