CmUC01G006940 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC01G006940
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	protein SLOW GREEN 1, chloroplastic
Location	CmU531Chr01: 7629295 .. 7630314 (-)
RNA-Seq Expression	CmUC01G006940
Synteny	CmUC01G006940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCTCCACATTTGCTTCCATGTCTTCACCTTCTTCTTCATCTCTTTCATCCATCTTCAATTTCAATGCATCTAAATCTAAATCAGTCTCACTCCCGAAGAATCTTCGTTTTGCTGCTCCCCTACCTCGCAATTCTGTTTCCGTGTATCCCTTTAGGGTTAGGGCTTCCTCTGTTCCCGTTCCCAGCAACCACCCTGTTGTTCAATGCCTCCGCAACTACGCCAGAGCTGCGATTCTCGTCGGTGCTGCAGCCACCATGGTTGGGAAATTCTCGCATTTGCCTGCCAGAGCTGAATCTCCAGGGGCGGTAGCTGAGGAAGCTTCAAGAATAGAGGAAGATCAGGGGATTGTTGAGGATTCGGACCAGGATGGGAAGCAATCCTCGCCGTTGAATGACTTTCTCGAATCGAATTCTGAAGCTGTCGAGGCGCTCAAGTCGCTTCTGCAGCAAAAGCTTGAAAATGGTGAGGATGAAGAAGCACTGAAAATTTTGAAGCAATTGGTATCTGCTCAGCCGTCGGTGACGGAGTGGAAATTTCTGATGGCCAGGTTGCTTGGGGAAATGGGCAAAACGGAAAATGCACGAGATGTTTTTGAAGAGATTTTGGCTGTGAATCCATTGTCTTTCGAAGCATTGTTTGAAAACGCATTGTTAATGGATCGTTGTGGGGAAGGGGAGGCTGTGCTCCGGCGATTAGAAGAGGCTTTGAGAATTGCCGAGAATGAAAACAAAAAGAAGGAAGCCAGAGATGTGAGGTTGATAATGGCTCAAATACAATTCTTGCAGAAGAATGTAGAGGAAGCCTTGAAGAGTTACAAAGAATTGGTGAAGGAGGATCCTAATGACTTTAGGCCTTACTTCTGTCAGGGAATGATCTACAGCTTGCTTGATAAGAATGTGGAGGCCAGACAGCAATTCGCCAAGTACAGGGAGCTCTCACCGAAGAAATTCGAGGTTGATGGGTACCTACGAACTCCATTATCAAGGATGAAAATCTTTGGATCAGATGAAAACTAA

mRNA sequence

ATGAGCTCCACATTTGCTTCCATGTCTTCACCTTCTTCTTCATCTCTTTCATCCATCTTCAATTTCAATGCATCTAAATCTAAATCAGTCTCACTCCCGAAGAATCTTCGTTTTGCTGCTCCCCTACCTCGCAATTCTGTTTCCGTGTATCCCTTTAGGGTTAGGGCTTCCTCTGTTCCCGTTCCCAGCAACCACCCTGTTGTTCAATGCCTCCGCAACTACGCCAGAGCTGCGATTCTCGTCGGTGCTGCAGCCACCATGGTTGGGAAATTCTCGCATTTGCCTGCCAGAGCTGAATCTCCAGGGGCGGTAGCTGAGGAAGCTTCAAGAATAGAGGAAGATCAGGGGATTGTTGAGGATTCGGACCAGGATGGGAAGCAATCCTCGCCGTTGAATGACTTTCTCGAATCGAATTCTGAAGCTGTCGAGGCGCTCAAGTCGCTTCTGCAGCAAAAGCTTGAAAATGGTGAGGATGAAGAAGCACTGAAAATTTTGAAGCAATTGGTATCTGCTCAGCCGTCGGTGACGGAGTGGAAATTTCTGATGGCCAGGTTGCTTGGGGAAATGGGCAAAACGGAAAATGCACGAGATGTTTTTGAAGAGATTTTGGCTGTGAATCCATTGTCTTTCGAAGCATTGTTTGAAAACGCATTGTTAATGGATCGTTGTGGGGAAGGGGAGGCTGTGCTCCGGCGATTAGAAGAGGCTTTGAGAATTGCCGAGAATGAAAACAAAAAGAAGGAAGCCAGAGATGTGAGGTTGATAATGGCTCAAATACAATTCTTGCAGAAGAATGTAGAGGAAGCCTTGAAGAGTTACAAAGAATTGGTGAAGGAGGATCCTAATGACTTTAGGCCTTACTTCTGTCAGGGAATGATCTACAGCTTGCTTGATAAGAATGTGGAGGCCAGACAGCAATTCGCCAAGTACAGGGAGCTCTCACCGAAGAAATTCGAGGTTGATGGGTACCTACGAACTCCATTATCAAGGATGAAAATCTTTGGATCAGATGAAAACTAA

Coding sequence (CDS)

ATGAGCTCCACATTTGCTTCCATGTCTTCACCTTCTTCTTCATCTCTTTCATCCATCTTCAATTTCAATGCATCTAAATCTAAATCAGTCTCACTCCCGAAGAATCTTCGTTTTGCTGCTCCCCTACCTCGCAATTCTGTTTCCGTGTATCCCTTTAGGGTTAGGGCTTCCTCTGTTCCCGTTCCCAGCAACCACCCTGTTGTTCAATGCCTCCGCAACTACGCCAGAGCTGCGATTCTCGTCGGTGCTGCAGCCACCATGGTTGGGAAATTCTCGCATTTGCCTGCCAGAGCTGAATCTCCAGGGGCGGTAGCTGAGGAAGCTTCAAGAATAGAGGAAGATCAGGGGATTGTTGAGGATTCGGACCAGGATGGGAAGCAATCCTCGCCGTTGAATGACTTTCTCGAATCGAATTCTGAAGCTGTCGAGGCGCTCAAGTCGCTTCTGCAGCAAAAGCTTGAAAATGGTGAGGATGAAGAAGCACTGAAAATTTTGAAGCAATTGGTATCTGCTCAGCCGTCGGTGACGGAGTGGAAATTTCTGATGGCCAGGTTGCTTGGGGAAATGGGCAAAACGGAAAATGCACGAGATGTTTTTGAAGAGATTTTGGCTGTGAATCCATTGTCTTTCGAAGCATTGTTTGAAAACGCATTGTTAATGGATCGTTGTGGGGAAGGGGAGGCTGTGCTCCGGCGATTAGAAGAGGCTTTGAGAATTGCCGAGAATGAAAACAAAAAGAAGGAAGCCAGAGATGTGAGGTTGATAATGGCTCAAATACAATTCTTGCAGAAGAATGTAGAGGAAGCCTTGAAGAGTTACAAAGAATTGGTGAAGGAGGATCCTAATGACTTTAGGCCTTACTTCTGTCAGGGAATGATCTACAGCTTGCTTGATAAGAATGTGGAGGCCAGACAGCAATTCGCCAAGTACAGGGAGCTCTCACCGAAGAAATTCGAGGTTGATGGGTACCTACGAACTCCATTATCAAGGATGAAAATCTTTGGATCAGATGAAAACTAA

Protein sequence

MSSTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLPRNSVSVYPFRVRASSVPVPSNHPVVQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEEDQGIVEDSDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIAENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSLLDKNVEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN

Homology

[Close]

BLAST of CmUC01G006940 vs. NCBI nr
Match: XP_038876236.1 (protein SLOW GREEN 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 594.3 bits (1531), Expect = 6.4e-166
Identity = 317/339 (93.51%), Postives = 330/339 (97.35%), Query Frame = 0


Query: 1   MSSTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLPRNSVSVYPFRVRASSVP 60
           MSSTFAS+SSP+SSSLSSIFNFNASKSK VSLP NLRFAAPL RNSVSV+PFRVRASSVP
Sbjct: 1   MSSTFASISSPTSSSLSSIFNFNASKSKMVSLPNNLRFAAPLSRNSVSVHPFRVRASSVP 60

Query: 61  VPSNHPVVQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEEDQGIVED 120
           V  NHPVVQCLRNYARAAIL+GAAATMVGKFSHLPARAESP AVAEEASR+EEDQ I ED
Sbjct: 61  VSRNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEEASRMEEDQRIAED 120

Query: 121 SDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKF 180
           SDQ+GKQSSPLNDFLESNSEA+EALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKF
Sbjct: 121 SDQEGKQSSPLNDFLESNSEAIEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKF 180

Query: 181 LMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIA 240
           LMARLLGEMGKTENAR+VFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEAL+IA
Sbjct: 181 LMARLLGEMGKTENAREVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALKIA 240

Query: 241 ENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSLLDKN 300
           ENENK KEARDV+LIMAQIQFLQKNVEEALKSYKELVKEDP+DFRPYFCQGMIYSLLDKN
Sbjct: 241 ENENKVKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDKN 300

Query: 301 VEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 340
           +EA+QQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 MEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 339

[Close]

BLAST of CmUC01G006940 vs. NCBI nr
Match: XP_022146470.1 (protein SLOW GREEN 1, chloroplastic [Momordica charantia])

HSP 1 Score: 570.1 bits (1468), Expect = 1.3e-158
Identity = 311/341 (91.20%), Postives = 324/341 (95.01%), Query Frame = 0


Query: 1   MSSTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLPRNSVSVYPFRVRASSVP 60
           MSSTFA+MSSPSSSSLSSIF+FNASK K VS P NLRFAAPL RNSV V  FRVRASS P
Sbjct: 1   MSSTFAAMSSPSSSSLSSIFHFNASKPKPVS-PPNLRFAAPLSRNSVYVQRFRVRASSAP 60

Query: 61  VPS---NHPVVQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEEDQGI 120
           +P    NHPVVQCLRNYARAAIL+GAAATMVGKFSHLPARAESP AVAEEASR+EED+ +
Sbjct: 61  LPDASRNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEEASRMEEDRQV 120

Query: 121 VEDSDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTE 180
           VEDSD+D +QSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTE
Sbjct: 121 VEDSDRDRQQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTE 180

Query: 181 WKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEAL 240
           WKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEAL
Sbjct: 181 WKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEAL 240

Query: 241 RIAENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSLL 300
           RIAE+ENK KEARDV+LIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSLL
Sbjct: 241 RIAEDENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSLL 300

Query: 301 DKNVEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 339
           DKNVEAR+QF+KYRELSPKKFEVDGYLRTPLSRMKIFGSDE
Sbjct: 301 DKNVEAREQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 340

[Close]

BLAST of CmUC01G006940 vs. NCBI nr
Match: XP_008466719.1 (PREDICTED: protein SLOW GREEN 1, chloroplastic [Cucumis melo])

HSP 1 Score: 562.4 bits (1448), Expect = 2.7e-156
Identity = 306/343 (89.21%), Postives = 324/343 (94.46%), Query Frame = 0


Query: 1   MSSTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLPRNSVSVYPFRVRASSVP 60
           MSSTFASMSSPSSSSLSSIFNFN S SK VS   NLRFAAPL R+S+SV+PFRVRASSVP
Sbjct: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP 60

Query: 61  VP-SNHPVVQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEE---DQG 120
           VP ++HPVVQCLRNYA+AAIL+GAAATMVGKFS+LPARAE+P AVAEEASR+EE   D+ 
Sbjct: 61  VPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAAVAEEASRMEETTPDKR 120

Query: 121 IVEDSDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVT 180
           IVEDSDQDG+QSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSA PSVT
Sbjct: 121 IVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVT 180

Query: 181 EWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEA 240
           EWKFLMARLL EMGKTENAR+VFEEILAV+PLS+EALFENALLMDRCGEGEAVLRRLEEA
Sbjct: 181 EWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEA 240

Query: 241 LRIAENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSL 300
           LRIAE E K KEARDV+LIMAQIQFLQKNVEEALKSYKELVKEDP+DFRPYFCQGMIYSL
Sbjct: 241 LRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL 300

Query: 301 LDKNVEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 340
           LDKN EA+QQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 LDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 343

[Close]

BLAST of CmUC01G006940 vs. NCBI nr
Match: TYJ97188.1 (protein SLOW GREEN 1 [Cucumis melo var. makuwa])

HSP 1 Score: 560.8 bits (1444), Expect = 7.8e-156
Identity = 305/343 (88.92%), Postives = 323/343 (94.17%), Query Frame = 0


Query: 1   MSSTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLPRNSVSVYPFRVRASSVP 60
           MSSTFASMSSPSSSSLSSIFNFN S SK VS   NLRFAAPL R+S+SV+PFRVRASSVP
Sbjct: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP 60

Query: 61  VP-SNHPVVQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEE---DQG 120
           VP ++HPVVQCLRNYA+AAIL+GAAATMVGKFS+LPARAE+P  VAEEASR+EE   D+ 
Sbjct: 61  VPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAVVAEEASRMEETSPDKR 120

Query: 121 IVEDSDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVT 180
           IVEDSDQDG+QSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSA PSVT
Sbjct: 121 IVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVT 180

Query: 181 EWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEA 240
           EWKFLMARLL EMGKTENAR+VFEEILAV+PLS+EALFENALLMDRCGEGEAVLRRLEEA
Sbjct: 181 EWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEA 240

Query: 241 LRIAENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSL 300
           LRIAE E K KEARDV+LIMAQIQFLQKNVEEALKSYKELVKEDP+DFRPYFCQGMIYSL
Sbjct: 241 LRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL 300

Query: 301 LDKNVEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 340
           LDKN EA+QQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 LDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 343

[Close]

BLAST of CmUC01G006940 vs. NCBI nr
Match: XP_004149472.1 (protein SLOW GREEN 1, chloroplastic [Cucumis sativus] >KAE8648295.1 hypothetical protein Csa_017797 [Cucumis sativus])

HSP 1 Score: 560.5 bits (1443), Expect = 1.0e-155
Identity = 305/345 (88.41%), Postives = 322/345 (93.33%), Query Frame = 0


Query: 1   MSSTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLPRNSVSVYPFRVRASSVP 60
           MSSTFAS+SSPSSSS SSIFNFN S SK VS   NLRFAAPL R+SVSV+PFRVRASSVP
Sbjct: 1   MSSTFASISSPSSSSFSSIFNFNPSNSKMVSFSNNLRFAAPLSRSSVSVHPFRVRASSVP 60

Query: 61  VP---SNHPVVQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEE---D 120
           VP   ++HPVV CLRNYA+AAIL+GAAATMVGKFS+LPARAES   VAEEASR+EE   D
Sbjct: 61  VPVPRTHHPVVHCLRNYAKAAILIGAAATMVGKFSNLPARAESSAVVAEEASRVEETTSD 120

Query: 121 QGIVEDSDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPS 180
             I EDSDQDG+QSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSA PS
Sbjct: 121 HRIFEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPS 180

Query: 181 VTEWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLE 240
           VTEWKFLMARLLGEMGKTE+AR+VFEEILAVNPLSFEALFENALLMDRCGEGEAV+RRLE
Sbjct: 181 VTEWKFLMARLLGEMGKTEHAREVFEEILAVNPLSFEALFENALLMDRCGEGEAVIRRLE 240

Query: 241 EALRIAENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIY 300
           EALRIAENENK KEARDV+LIMAQIQFLQKNVEEALKSYKELVKEDP+DFRPYFCQGMIY
Sbjct: 241 EALRIAENENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIY 300

Query: 301 SLLDKNVEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 340
           SLLDKN+EA+QQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 SLLDKNIEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 345

[Close]

BLAST of CmUC01G006940 vs. ExPASy Swiss-Prot
Match: Q9LS48 (protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 3.6e-95
Identity = 201/331 (60.73%), Postives = 247/331 (74.62%), Query Frame = 0


Query: 8   MSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLPRNSVSVYPFRVRASSVPVPSNHPV 67
           M S  S+S S + +F A K+  V+ P        +PR    +   R+RASS    S +  
Sbjct: 1   MISSLSASSSLVSSFVAVKATPVTGPL-------IPRR--DLLSIRIRASSNQNSSGYCF 60

Query: 68  VQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEEDQGIVEDSDQDGKQ 127
            +  +++A++AIL+GAA +M GKFS LP +AESP    E+           E  ++   +
Sbjct: 61  PEKFKSFAKSAILIGAAVSMTGKFSTLPVKAESPVTTIEKTYE--------EVKEEKLSE 120

Query: 128 SSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLG 187
            +PL++ L+S  EAVE L+SLLQQKLE GEDEEALK+L++LV+AQP  TEWKFLMARLLG
Sbjct: 121 ITPLSELLDSTPEAVETLRSLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMARLLG 180

Query: 188 EMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIAENENKKK 247
           EMG+ ENAR +FEEIL  NPLSFEALFENALLMDR GEG AVL+RLE+AL +AE E   K
Sbjct: 181 EMGRPENARQMFEEILQRNPLSFEALFENALLMDRSGEGNAVLQRLEDALAVAEAEYLVK 240

Query: 248 EARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSLLDKNVEARQQF 307
           EARDVRLI+AQI FLQKNV+EALKSY++L KEDP DFRPYFC+GMIYSLLDKNVEA++QF
Sbjct: 241 EARDVRLIIAQIHFLQKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQF 300

Query: 308 AKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 339
           AKYRELSPKKFEV+GYLRTPLS+MK+FG  E
Sbjct: 301 AKYRELSPKKFEVEGYLRTPLSKMKLFGGSE 314

[Close]

BLAST of CmUC01G006940 vs. ExPASy Swiss-Prot
Match: Q58741 (TPR repeat-containing protein MJ1345 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ1345 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 5.3e-06
Identity = 51/184 (27.72%), Postives = 92/184 (50.00%), Query Frame = 0


Query: 135 LESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQP-SVTEWKFLMARLLGEMGKTE 194
           LE +   V+ + + + +KL  GE + ALKI+ +++   P S   W      +L   GK +
Sbjct: 108 LEKSDLPVKYVTAFILKKL--GEYDYALKIIDKILKKYPKSAIAWA-EKGEILYREGKLK 167

Query: 195 NARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIAENENKKKEARDVR 254
            + + F+  L +NP   ++L     ++ + G     L+ L+   ++ E  NK     D+R
Sbjct: 168 KSLECFDNALKINPKDCQSLLYKGEILFKLGRYGEALKCLK---KVFERNNK-----DIR 227

Query: 255 LIMAQIQFL--QKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSLLDKNVEARQQFAKYR 314
            +M  IQ L     + +AL+  K+ +K +P+D   Y  +G+I + L K  EA + F K  
Sbjct: 228 ALMYIIQILIYLGRLNQALEYTKKALKLNPDDPLLYLYKGIILNKLGKYNEAIKYFDKVL 280

Query: 315 ELSP 316
           E++P
Sbjct: 288 EINP 280

[Close]

BLAST of CmUC01G006940 vs. ExPASy Swiss-Prot
Match: O06917 (TPR repeat-containing protein MJ0263 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0263 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.9e-06
Identity = 42/157 (26.75%), Postives = 76/157 (48.41%), Query Frame = 0


Query: 153 LENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEA 212
           +E GE E+AL+ L + +   P++T      A +L  +GK + A D   +IL++      A
Sbjct: 125 IEFGEFEKALEALDEFLKIYPNLTSILRQKASILEILGKLDEALDCVNKILSIKKDDAHA 184

Query: 213 LFENALLMDRCGEGEAVLRRLEEALRIAENENKKKEARDVRLIMAQIQFLQKNVEEALKS 272
            +    ++ + G  +  L  L+ A+ +  NEN     +D+    A ++    N EEAL  
Sbjct: 185 WYLKGRILKKLGNIKEALDALKMAINL--NENLVHVYKDI----AYLELANNNYEEALNY 244

Query: 273 YKELVKEDPNDFRPYFCQGMIYSLLDKNVEARQQFAK 310
             + +++ PND    F   +IY  L+K  +A + + K
Sbjct: 245 ITKYLEKFPNDVEAKFYLALIYENLNKVDDALKIYDK 275

[Close]

BLAST of CmUC01G006940 vs. ExPASy Swiss-Prot
Match: Q3UV71 (Protein O-mannosyl-transferase TMTC1 OS=Mus musculus OX=10090 GN=Tmtc1 PE=2 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 2.0e-05
Identity = 42/184 (22.83%), Postives = 83/184 (45.11%), Query Frame = 0


Query: 139 SEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENARDV 198
           +   E L  L       G  +EAL++ ++ VS QPS  E +  +A++L  MG+T+ A  +
Sbjct: 740 ARTAEVLSPLGALYYNTGRHKEALEVYREAVSLQPSQRELRLALAQVLAVMGQTKEAEKI 799

Query: 199 FEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIAENENKKKEARDVRLIMAQ 258
              I++  P   E     + +  +       L  +E+AL++   + K         ++++
Sbjct: 800 TSHIVSEEPRCLECYRLLSAIHSKQEHHGKALEAIEKALQLKPKDPK---------VISE 859

Query: 259 IQFLQKN-------VEEALKSYKELVKEDPNDFRPYFCQGMIYSLLDKNVEARQQFAKYR 316
           + F + N       +++A +SY+  V  DP+  + +   G I  +    V AR  + +  
Sbjct: 860 LFFTKGNQLREQNLLDKAFESYEAAVTLDPDQAQAWMNMGGIRHIQGSYVSARAYYERAL 914

[Close]

BLAST of CmUC01G006940 vs. ExPASy Swiss-Prot
Match: Q8IUR5 (Protein O-mannosyl-transferase TMTC1 OS=Homo sapiens OX=9606 GN=TMTC1 PE=1 SV=3)

HSP 1 Score: 46.2 bits (108), Expect = 8.5e-04
Identity = 40/180 (22.22%), Postives = 83/180 (46.11%), Query Frame = 0


Query: 143 EALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENARDVFEEI 202
           E L  L       G  EEAL+I ++  + QPS  E +  +A++L  MG+T+ A  +   I
Sbjct: 684 EILSPLGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEKMTNHI 743

Query: 203 LAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIAENENKKKEARDVRLIMAQIQFL 262
           ++      E     + +  +    +  L  +++AL++   + K         +++++ F 
Sbjct: 744 VSEETGCLECYRLLSAIYSKQENHDKALDAIDKALQLKPKDPK---------VISELFFT 803

Query: 263 QKN-------VEEALKSYKELVKEDPNDFRPYFCQGMIYSLLDKNVEARQQFAKYRELSP 316
           + N       +++A +SY+  V+ +P+  + +   G I  +  K V AR  + +  +L P
Sbjct: 804 KGNQLREQNLLDKAFESYRVAVQLNPDQAQAWMNMGGIQHIKGKYVSARAYYERALQLVP 854

[Close]

BLAST of CmUC01G006940 vs. ExPASy TrEMBL
Match: A0A6J1CXB6 (protein SLOW GREEN 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111015681 PE=4 SV=1)

HSP 1 Score: 570.1 bits (1468), Expect = 6.2e-159
Identity = 311/341 (91.20%), Postives = 324/341 (95.01%), Query Frame = 0


Query: 1   MSSTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLPRNSVSVYPFRVRASSVP 60
           MSSTFA+MSSPSSSSLSSIF+FNASK K VS P NLRFAAPL RNSV V  FRVRASS P
Sbjct: 1   MSSTFAAMSSPSSSSLSSIFHFNASKPKPVS-PPNLRFAAPLSRNSVYVQRFRVRASSAP 60

Query: 61  VPS---NHPVVQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEEDQGI 120
           +P    NHPVVQCLRNYARAAIL+GAAATMVGKFSHLPARAESP AVAEEASR+EED+ +
Sbjct: 61  LPDASRNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEEASRMEEDRQV 120

Query: 121 VEDSDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTE 180
           VEDSD+D +QSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTE
Sbjct: 121 VEDSDRDRQQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTE 180

Query: 181 WKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEAL 240
           WKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEAL
Sbjct: 181 WKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEAL 240

Query: 241 RIAENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSLL 300
           RIAE+ENK KEARDV+LIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSLL
Sbjct: 241 RIAEDENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSLL 300

Query: 301 DKNVEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 339
           DKNVEAR+QF+KYRELSPKKFEVDGYLRTPLSRMKIFGSDE
Sbjct: 301 DKNVEAREQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 340

[Close]

BLAST of CmUC01G006940 vs. ExPASy TrEMBL
Match: A0A1S3CRV7 (protein SLOW GREEN 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103504062 PE=4 SV=1)

HSP 1 Score: 562.4 bits (1448), Expect = 1.3e-156
Identity = 306/343 (89.21%), Postives = 324/343 (94.46%), Query Frame = 0


Query: 1   MSSTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLPRNSVSVYPFRVRASSVP 60
           MSSTFASMSSPSSSSLSSIFNFN S SK VS   NLRFAAPL R+S+SV+PFRVRASSVP
Sbjct: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP 60

Query: 61  VP-SNHPVVQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEE---DQG 120
           VP ++HPVVQCLRNYA+AAIL+GAAATMVGKFS+LPARAE+P AVAEEASR+EE   D+ 
Sbjct: 61  VPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAAVAEEASRMEETTPDKR 120

Query: 121 IVEDSDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVT 180
           IVEDSDQDG+QSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSA PSVT
Sbjct: 121 IVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVT 180

Query: 181 EWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEA 240
           EWKFLMARLL EMGKTENAR+VFEEILAV+PLS+EALFENALLMDRCGEGEAVLRRLEEA
Sbjct: 181 EWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEA 240

Query: 241 LRIAENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSL 300
           LRIAE E K KEARDV+LIMAQIQFLQKNVEEALKSYKELVKEDP+DFRPYFCQGMIYSL
Sbjct: 241 LRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL 300

Query: 301 LDKNVEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 340
           LDKN EA+QQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 LDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 343

[Close]

BLAST of CmUC01G006940 vs. ExPASy TrEMBL
Match: A0A5D3BG83 (Protein SLOW GREEN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold174G00680 PE=4 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 3.8e-156
Identity = 305/343 (88.92%), Postives = 323/343 (94.17%), Query Frame = 0


Query: 1   MSSTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLPRNSVSVYPFRVRASSVP 60
           MSSTFASMSSPSSSSLSSIFNFN S SK VS   NLRFAAPL R+S+SV+PFRVRASSVP
Sbjct: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP 60

Query: 61  VP-SNHPVVQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEE---DQG 120
           VP ++HPVVQCLRNYA+AAIL+GAAATMVGKFS+LPARAE+P  VAEEASR+EE   D+ 
Sbjct: 61  VPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAVVAEEASRMEETSPDKR 120

Query: 121 IVEDSDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVT 180
           IVEDSDQDG+QSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSA PSVT
Sbjct: 121 IVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVT 180

Query: 181 EWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEA 240
           EWKFLMARLL EMGKTENAR+VFEEILAV+PLS+EALFENALLMDRCGEGEAVLRRLEEA
Sbjct: 181 EWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEA 240

Query: 241 LRIAENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSL 300
           LRIAE E K KEARDV+LIMAQIQFLQKNVEEALKSYKELVKEDP+DFRPYFCQGMIYSL
Sbjct: 241 LRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL 300

Query: 301 LDKNVEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 340
           LDKN EA+QQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 LDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 343

[Close]

BLAST of CmUC01G006940 vs. ExPASy TrEMBL
Match: A0A6J1GYL7 (protein SLOW GREEN 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111458452 PE=4 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 3.4e-149
Identity = 298/339 (87.91%), Postives = 310/339 (91.45%), Query Frame = 0


Query: 1   MSSTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLPRNSVSVYPFRVRASSVP 60
           MS TFASMSSPSSSSLSSI  F +SKSK V  P NLRFAAP+ R SVSV+ FRVRASSVP
Sbjct: 1   MSFTFASMSSPSSSSLSSI--FISSKSKPVP-PPNLRFAAPISRTSVSVHRFRVRASSVP 60

Query: 61  VPSNHPVVQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEEDQGIVED 120
           V  NHPVVQC +NYARAAIL+GAAATMVGKFSHLPARAESP  V EEASRIEE+Q IVED
Sbjct: 61  VSRNHPVVQCFKNYARAAILIGAAATMVGKFSHLPARAESPVVVEEEASRIEEEQRIVED 120

Query: 121 SDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKF 180
           SDQDG+QSSPLNDFLESNSEAVEALKSLLQQKLEN EDEEALKIL QLVSAQ SVTEWKF
Sbjct: 121 SDQDGQQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKF 180

Query: 181 LMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIA 240
           L ARLLGEMGKTENAR+VFEEILA NPLSFEALFENALLMDRCGEGEAVL RLE+ALRIA
Sbjct: 181 LKARLLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLEQALRIA 240

Query: 241 ENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSLLDKN 300
           ENE K KEARDVRLIMAQIQFLQKNVE AL SYKEL+KEDP+DFRPYFCQGMIYSLLDKN
Sbjct: 241 ENEKKAKEARDVRLIMAQIQFLQKNVEGALTSYKELIKEDPSDFRPYFCQGMIYSLLDKN 300

Query: 301 VEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 340
            EARQQF+KYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 EEARQQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 336

[Close]

BLAST of CmUC01G006940 vs. ExPASy TrEMBL
Match: A0A6J1JQU3 (protein SLOW GREEN 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111487518 PE=4 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 8.5e-148
Identity = 298/340 (87.65%), Postives = 310/340 (91.18%), Query Frame = 0


Query: 1   MSSTFASMSSP-SSSSLSSIFNFNASKSKSVSLPKNLRFAAPLPRNSVSVYPFRVRASSV 60
           MS TFASMSSP SSSSLSSI  F++SKSK V  P NLRFAAPL R SVSVY FRVRASSV
Sbjct: 1   MSFTFASMSSPSSSSSLSSI--FSSSKSKPVP-PPNLRFAAPLSRTSVSVYRFRVRASSV 60

Query: 61  PVPSNHPVVQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEEDQGIVE 120
           PV  NHPVVQC +NYARAAIL+GAAATMVGKFSHLPARAESP AV EEASR+EE+Q IVE
Sbjct: 61  PVSRNHPVVQCFKNYARAAILIGAAATMVGKFSHLPARAESPVAVEEEASRMEEEQRIVE 120

Query: 121 DSDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWK 180
           DSDQD +QSSPLNDFLESNSEAVEALKSLLQQKLEN EDEEALKIL QLVSAQ SVTEWK
Sbjct: 121 DSDQDRQQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWK 180

Query: 181 FLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRI 240
           FL ARLLGEMGKTENAR+VFEEILA NPLSFEALFENALLMDRCGEGEAVL RLE+ALRI
Sbjct: 181 FLKARLLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLEQALRI 240

Query: 241 AENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSLLDK 300
           AENE K KEARDVRLIMAQIQFLQKNVE AL SYKEL+KEDP+DFRPYFCQGMIYSLLDK
Sbjct: 241 AENEKKAKEARDVRLIMAQIQFLQKNVEGALTSYKELIKEDPSDFRPYFCQGMIYSLLDK 300

Query: 301 NVEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 340
           N EARQQF KYRELSPKK+EVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 NEEARQQFGKYRELSPKKYEVDGYLRTPLSRMKIFGSDEN 337

[Close]

BLAST of CmUC01G006940 vs. TAIR 10
Match: AT3G18420.1 (Protein prenylyltransferase superfamily protein )

HSP 1 Score: 349.7 bits (896), Expect = 2.6e-96
Identity = 201/331 (60.73%), Postives = 247/331 (74.62%), Query Frame = 0


Query: 8   MSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLPRNSVSVYPFRVRASSVPVPSNHPV 67
           M S  S+S S + +F A K+  V+ P        +PR    +   R+RASS    S +  
Sbjct: 1   MISSLSASSSLVSSFVAVKATPVTGPL-------IPRR--DLLSIRIRASSNQNSSGYCF 60

Query: 68  VQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEEDQGIVEDSDQDGKQ 127
            +  +++A++AIL+GAA +M GKFS LP +AESP    E+           E  ++   +
Sbjct: 61  PEKFKSFAKSAILIGAAVSMTGKFSTLPVKAESPVTTIEKTYE--------EVKEEKLSE 120

Query: 128 SSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLG 187
            +PL++ L+S  EAVE L+SLLQQKLE GEDEEALK+L++LV+AQP  TEWKFLMARLLG
Sbjct: 121 ITPLSELLDSTPEAVETLRSLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMARLLG 180

Query: 188 EMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIAENENKKK 247
           EMG+ ENAR +FEEIL  NPLSFEALFENALLMDR GEG AVL+RLE+AL +AE E   K
Sbjct: 181 EMGRPENARQMFEEILQRNPLSFEALFENALLMDRSGEGNAVLQRLEDALAVAEAEYLVK 240

Query: 248 EARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSLLDKNVEARQQF 307
           EARDVRLI+AQI FLQKNV+EALKSY++L KEDP DFRPYFC+GMIYSLLDKNVEA++QF
Sbjct: 241 EARDVRLIIAQIHFLQKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQF 300

Query: 308 AKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 339
           AKYRELSPKKFEV+GYLRTPLS+MK+FG  E
Sbjct: 301 AKYRELSPKKFEVEGYLRTPLSKMKLFGGSE 314

[Close]

BLAST of CmUC01G006940 vs. TAIR 10
Match: AT2G37400.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 140.6 bits (353), Expect = 2.4e-33
Identity = 97/295 (32.88%), Postives = 159/295 (53.90%), Query Frame = 0


Query: 42  LPRNSVSVYPFRVRASSVPVPSNHPVVQCLRNYARAAILVGAAATMVGKFSHLPARA-ES 101
           LPR++ S     ++ASS    S    +  L+  +       AAA  +      P+ A  +
Sbjct: 37  LPRSTSSFKCISIKASS--SKSQDSKLSILK--STCVSFTAAAALFLVNLQLKPSPAIAA 96

Query: 102 PGAVAEEASRIEEDQGIVEDSDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEE 161
           P A       +++  G V   +++      L ++L S+ + VEAL+SL++ ++++ +  E
Sbjct: 97  PVAATPLMESLKQSNGNVSFEEEE----RSLEEYLASHPDDVEALRSLMEVRIKSRKLLE 156

Query: 162 ALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLM 221
           A++++ +L+  +P   EW  L A +    G  E+A+  FEEIL  +PL  EA     +  
Sbjct: 157 AIELIDRLIELEPEEKEWPMLKANIFSYSGDLESAKTGFEEILVKDPLRVEAYHGLVMAY 216

Query: 222 DRCGEG-EAVLRRLEEALRIAENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKE 281
              G+   AV +R+EEA+   + E  +K+ RD +L++AQI+ ++    EALK Y+ELVKE
Sbjct: 217 SDSGDDLNAVEKRIEEAMVRCKKEKNRKDLRDFKLLVAQIRVIEGKHNEALKLYEELVKE 276

Query: 282 DPNDFRPYFCQGMIYSLLDKNVEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIF 335
           +P DFRPY CQG+IY++L K  EA +QF K+R L PK      Y    +   K+F
Sbjct: 277 EPRDFRPYLCQGIIYTVLKKENEAEKQFEKFRRLVPKNHPYREYFMDNMVASKLF 323

[Close]

BLAST of CmUC01G006940 vs. TAIR 10
Match: AT3G53560.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 135.6 bits (340), Expect = 7.6e-32
Identity = 102/325 (31.38%), Postives = 172/325 (52.92%), Query Frame = 0


Query: 20  FNFNASKSKSVSLPKNLRFAAPLPRNSVSVYPFRVRASS-----VPVPSNHPVVQCLRNY 79
           F+ + + + S + PKNL  ++  P +S+     +  +S       P+P + P     R +
Sbjct: 14  FHLSFTHTSSSTFPKNLFKSSIQPISSLKSASIKASSSKFQNSITPLPKSTP----FRLF 73

Query: 80  ARAAILVGAAATMVGKFSHLPARAESPGAVAEEA--SRIEEDQGIVEDSDQDGKQSSPLN 139
               I +  AA ++    HL    +SP   A  A    +E  + +  + ++       L+
Sbjct: 74  KSTCITLTTAAALLLANLHL----KSPAIAAPIAPPPSVESKENVTLEEEE-----RALD 133

Query: 140 DFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKT 199
           + L ++   V+AL+SL++ K+++ +  EA++++ +L+  +P   EW  L A +    G  
Sbjct: 134 EHLITHPSDVDALRSLMEVKIKSRKLTEAVEVIDRLIKLEPEEKEWPVLKANIFTYSGDL 193

Query: 200 ENARDVFEEILAVNPLSFEALFENALLMDRCGEG---EAVLRRLEEALRIAENENKKKEA 259
           + A+  FEEILA +PL  EA   + LLM     G   + V  R+EEA+   + EN + + 
Sbjct: 194 DLAKTGFEEILAKDPLRVEAY--HGLLMAYSDAGLDLKEVESRIEEAMLKCKKENNQNDF 253

Query: 260 RDVRLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSLLDKNVEARQQFAK 319
           RD +L++AQI+ ++    EALK Y+ELVKE+P DFRPY CQG+IY+LL K  +A +QF  
Sbjct: 254 RDFKLLVAQIRVIEGKHSEALKLYQELVKEEPRDFRPYLCQGIIYTLLKKKDKAEEQFDN 313

Query: 320 YRELSPKKFEVDGYLRTPLSRMKIF 335
           +R+L PK      Y    +   K+F
Sbjct: 314 FRKLVPKNHPYREYFMDNMIATKLF 323

[Close]

BLAST of CmUC01G006940 vs. TAIR 10
Match: AT4G39470.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 134.0 bits (336), Expect = 2.2e-31
Identity = 96/305 (31.48%), Postives = 161/305 (52.79%), Query Frame = 0


Query: 20  FNFNASKSKSVSLPKNLRFAAPLPRNSVSVYPFRVRASSVPVPSNHPVVQCLRNYARAAI 79
           F +  S+  +  L +   FA PLP          +  SS  + S+   VQ L    +AAI
Sbjct: 38  FRWRKSRPFAPRLAQPDNFAPPLP----------LIRSSTSLLSSKDFVQMLAR--KAAI 97

Query: 80  LVGAAATMVGKFSHLPARAESPGAVAEEASRIEEDQGIVEDSDQDGKQSSPLNDFLESNS 139
           L+  +   +G  S  PA A     V  +A    ED+ + E               LE+  
Sbjct: 98  LLVGSFVFLGFCSSKPALALPTATVVSQAEL--EDEKMFE-------------KLLENEP 157

Query: 140 EAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENARDVF 199
           E +EA+K+++ +K+  G++E+A+K +++L+  +P   EWK L A     MG+   A+ ++
Sbjct: 158 ENMEAMKAVVYKKMRRGKNEDAVKYVEKLMKLEPHEVEWKLLEALCYETMGELSKAKRLY 217

Query: 200 EEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIAENENKKKEARDVRLIMAQI 259
           ++IL   PL   AL   A++M +  +  +V   L EA+ +A   N+  E R++++++ Q+
Sbjct: 218 KDILKEQPLLIRALHGLAMVMHKTHD-TSVFDMLIEAMEVARQGNRVTEERNIQVLIGQM 277

Query: 260 QFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSLLDKNVEARQQFAKYRELSPKKFE 319
             ++   EE LK ++++V ++P DFRPY CQG++YSL+DK  EA QQF  Y  L P +F 
Sbjct: 278 HIVEGQFEEGLKIFQQMVNDNPRDFRPYLCQGIVYSLMDKKEEAAQQFEIYWSLVPGEFP 314

Query: 320 VDGYL 325
             G+L
Sbjct: 338 QKGFL 314

[Close]

BLAST of CmUC01G006940 vs. TAIR 10
Match: AT5G02590.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 129.4 bits (324), Expect = 5.4e-30
Identity = 100/296 (33.78%), Postives = 159/296 (53.72%), Query Frame = 0


Query: 54  VRASSVPVPSNHPVVQCLRNYARAAILVGAAATMVGKFSHL------PARAESPGAVAEE 113
           +RASS    S++P    L+      + +  AA ++    HL       A   SP      
Sbjct: 43  IRASSF---SSNPKPSFLKT---TCVTLTTAAALLSASLHLSTKPVTAATLVSPPPPPST 102

Query: 114 ASRIEEDQGIVEDSDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQ 173
           A+ +  DQ  +    ++ ++ + L   L  N   VEAL+SL++ K +    + AL+IL +
Sbjct: 103 AADLTSDQ--ISSRPKEEEEEAALEKHLTKNPNDVEALQSLMKIKFQTKNIDHALEILNR 162

Query: 174 LVSAQPSVTEWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGE 233
           L+  QP   EW+ L A++    G  ++A   FEE+L+ +P   EA   + L+M    E E
Sbjct: 163 LIEIQPEEQEWRILKAQVQTYGGDFDSATKGFEEVLSKDPFRVEAY--HGLVM-AYSESE 222

Query: 234 AVL----RRLEEALRIAENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPND 293
           + L     R+ EA+   + EN KK+ RD  L++AQI+ ++ N  EAL+ Y+ELVK++P D
Sbjct: 223 SKLSEIESRINEAIEKCKKEN-KKDFRDFMLLIAQIRVIKGNPIEALRVYQELVKDEPKD 282

Query: 294 FRPYFCQGMIYSLLDKNVEARQQFAKYRELSPKKFEVDGYL-RTPLSRMKIFGSDE 339
           FRPY CQG+IY+L+ K  EA +QFA++R L P+      YL    L+  K+F  ++
Sbjct: 283 FRPYLCQGLIYTLMKKKDEAEKQFAEFRRLVPENHPYKEYLDANVLNTNKLFAKNQ 326

The following BLAST results are available for this feature:

BLAST of CmUC01G006940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876236.1	6.4e-166	93.51	protein SLOW GREEN 1, chloroplastic [Benincasa hispida]	[more]
XP_022146470.1	1.3e-158	91.20	protein SLOW GREEN 1, chloroplastic [Momordica charantia]	[more]
XP_008466719.1	2.7e-156	89.21	PREDICTED: protein SLOW GREEN 1, chloroplastic [Cucumis melo]	[more]
TYJ97188.1	7.8e-156	88.92	protein SLOW GREEN 1 [Cucumis melo var. makuwa]	[more]
XP_004149472.1	1.0e-155	88.41	protein SLOW GREEN 1, chloroplastic [Cucumis sativus] >KAE8648295.1 hypothetical...	[more]

BLAST of CmUC01G006940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LS48	3.6e-95	60.73	protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 ...	[more]
Q58741	5.3e-06	27.72	TPR repeat-containing protein MJ1345 OS=Methanocaldococcus jannaschii (strain AT...	[more]
O06917	6.9e-06	26.75	TPR repeat-containing protein MJ0263 OS=Methanocaldococcus jannaschii (strain AT...	[more]
Q3UV71	2.0e-05	22.83	Protein O-mannosyl-transferase TMTC1 OS=Mus musculus OX=10090 GN=Tmtc1 PE=2 SV=2	[more]
Q8IUR5	8.5e-04	22.22	Protein O-mannosyl-transferase TMTC1 OS=Homo sapiens OX=9606 GN=TMTC1 PE=1 SV=3	[more]

BLAST of CmUC01G006940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CXB6	6.2e-159	91.20	protein SLOW GREEN 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1110156...	[more]
A0A1S3CRV7	1.3e-156	89.21	protein SLOW GREEN 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103504062 PE=4...	[more]
A0A5D3BG83	3.8e-156	88.92	Protein SLOW GREEN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold174...	[more]
A0A6J1GYL7	3.4e-149	87.91	protein SLOW GREEN 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11145845...	[more]
A0A6J1JQU3	8.5e-148	87.65	protein SLOW GREEN 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111487518 ...	[more]

BLAST of CmUC01G006940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18420.1	2.6e-96	60.73	Protein prenylyltransferase superfamily protein	[more]
AT2G37400.1	2.4e-33	32.88	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G53560.1	7.6e-32	31.38	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G39470.1	2.2e-31	31.48	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G02590.1	5.4e-30	33.78	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 223..250
None	No IPR available	COILS	Coil	Coil	coord: 139..159
None	No IPR available	COILS	Coil	Coil	coord: 259..279
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 90..338
None	No IPR available	PANTHER	PTHR26312:SF138	PROTEIN SLOW GREEN 1, CHLOROPLASTIC	coord: 90..338
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 176..209 e-value: 46.0 score: 9.1 coord: 284..317 e-value: 120.0 score: 5.6 coord: 142..175 e-value: 310.0 score: 1.8 coord: 250..283 e-value: 0.48 score: 19.5
IPR019734	Tetratricopeptide repeat	PFAM	PF13174	TPR_6	coord: 180..208 e-value: 0.11 score: 13.1 coord: 251..282 e-value: 0.0036 score: 17.8
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 250..283 score: 8.4374
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 120..326 e-value: 4.1E-25 score: 90.5
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 136..317

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC01G006940.1	CmUC01G006940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
molecular_function	GO:0005515	protein binding