CmUC01G006910 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC01G006910
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Defensin-like protein 6
Location	CmU531Chr01: 7614523 .. 7616079 (+)
RNA-Seq Expression	CmUC01G006910
Synteny	CmUC01G006910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTTCTTTTCAGCTGCAATTTTGCTGTTGCTCCTCATTTTTGGCACTGGTTGGTTTGTTTGTTGTGTATTTTTGATGAATTCTATACTTTTTTGTTTGTTCTATTTGTTGAAGGAATCTTTAGGCATGTTTTTCTTAGCACTTTTAAATCTTAAAGTGCTTTTGAAGTTCTCTTGTGTCCAACTACTTTTGGCTTTTGAGAGTGTTTTCCCCATGTTGAAATTACTCTTTCCTCAACATTATTACCATCCTTGAGAAGTAACATGCAAGCACTGTTTTTTCATAATGGACTGTGCATGGAAATTACGCTCTTTTTTTCTTTTCTTTTTTTTTTTCCTTCCCCCAAAATTAGTTTTATGTTATCAAACAGTAAACCTGATGGTAATTTTGACTCATACTCAAAACATATAGCATATGATCAAAAGTAATTTCCCCTCCATATATAATATCTAGATTCATTAATTATTATTTTGATGGAACTATCCATATATATTTATTTATTTATTTATGTGATTTTTTTTTCTTAAGAAAAATGGCAAAAACCACCCTGAAGTATGGTGGTAACTGCAATTAATCCCTCAAACTTTCTATTGTAAAAATTGAACCCCTAAACTTCTACGAGTATTAAAATTGGACCATCAAGCTAACAATAATCTTAGAAATTGATTACAATTTACACAATTATGTAAGTTTGAAGGTCCAATTTGACCTAATTTTAACACTCATTTAAGTTTGAGAGCTCAATTTTTAAAATCAAAAGTTTAAGGGTATAATTGTCACTACTACCCTACTTTAGAGGTGATTTTTTCAATTTGTACTTTTTTAACATCGGTTGGATGAATCAAATTTTATAATTGATAATACAAGTTTATGCTAATTAATTTCCCTTATGTTTGACACATTAAAAAAATGATTTTTTTTCTTTTTTTTTTCAGAAATTAAATTGGCTAATTAAACTTTTTATCTAAAAAAAACATTAAGAGAAATTCTTTCCAAACAACTTTTAATTATAAAAGAATTAAAAGAATTAAAGCAGTTTTGATATATTGAAACTTATAAGGTTAAGTTTTTGGGTTGATTGATGATTTAACGATCATATTGTGGTTCAGGGATGGAGCCAATTGTTGTGGAGGCAAGGGTATGTGAATCTCTAAGCCACAGTTTCAAGGGTCTGTGCTTTAGTAGCACAAATTGTGGCAACATTTGCAAGACAGAGGGGTTTACCGGTGGCGTCTGCAGGGGCTTCCGCCGTCGCTGCTTTTGCACAAAGCACTGTGTTTGAAATCTCAATAAGTAACTAATTAATTGTCTGTTTCTAGTAGACTACTTATCAACTTGTATGAATAAAGTGGCCAATGCCATCGTCTTTGGAGTTTGGCCTCTCCTTTCCTTTCCTTTACTTTTTATATTTTCCCCTTTTGTCTTATGCTTTAATTACATTTATGCAATCATATTATAAATGTTCGTATGTGTGATGTAATTTGATGCTTCATATTTTAAGGAATGGCAGAGAGTGTTTCTAAAATTGTGTTGAATTACAAGTTTAGTCTTTTG

mRNA sequence

ATGAAGTTCTTTTCAGCTGCAATTTTGCTGTTGCTCCTCATTTTTGGCACTGGTTGGTTTGTTTGTTGTCATATGATCAAAAGGATGGAGCCAATTGTTGTGGAGGCAAGGGTATGTGAATCTCTAAGCCACAGTTTCAAGGGTCTGTGCTTTAGTAGCACAAATTGTGGCAACATTTGCAAGACAGAGGGGTTTACCGGTGGCGTCTGCAGGGGCTTCCGCCGTCGCTGCTTTTGCACAAAGCACTGTGTTTGAAATCTCAATAAGTAACTAATTAATTGTCTGTTTCTAGTAGACTACTTATCAACTTGTATGAATAAAGTGGCCAATGCCATCGTCTTTGGAGTTTGGCCTCTCCTTTCCTTTCCTTTACTTTTTATATTTTCCCCTTTTGTCTTATGCTTTAATTACATTTATGCAATCATATTATAAATGTTCGTATGTGTGATGTAATTTGATGCTTCATATTTTAAGGAATGGCAGAGAGTGTTTCTAAAATTGTGTTGAATTACAAGTTTAGTCTTTTG

Coding sequence (CDS)

ATGAAGTTCTTTTCAGCTGCAATTTTGCTGTTGCTCCTCATTTTTGGCACTGGTTGGTTTGTTTGTTGTCATATGATCAAAAGGATGGAGCCAATTGTTGTGGAGGCAAGGGTATGTGAATCTCTAAGCCACAGTTTCAAGGGTCTGTGCTTTAGTAGCACAAATTGTGGCAACATTTGCAAGACAGAGGGGTTTACCGGTGGCGTCTGCAGGGGCTTCCGCCGTCGCTGCTTTTGCACAAAGCACTGTGTTTGA

Protein sequence

MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRCFCTKHCV

Homology

[Close]

BLAST of CmUC01G006910 vs. NCBI nr
Match: AHA50473.1 (defensin-like protein 6 [Citrullus lanatus])

HSP 1 Score: 148.7 bits (374), Expect = 2.3e-32
Identity = 74/84 (88.10%), Postives = 74/84 (88.10%), Query Frame = 0


Query: 1  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNIC 60
          MKFFSAAILLLLLIFGTG          MEPIVVEARVCESLSHSFKGLCFSSTNCGNIC
Sbjct: 1  MKFFSAAILLLLLIFGTG----------MEPIVVEARVCESLSHSFKGLCFSSTNCGNIC 60

Query: 61 KTEGFTGGVCRGFRRRCFCTKHCV 85
          KTEGFTGGVCRGFRRRCFCTKHCV
Sbjct: 61 KTEGFTGGVCRGFRRRCFCTKHCV 74

[Close]

BLAST of CmUC01G006910 vs. NCBI nr
Match: AHA50472.1 (defensin-like protein 5 [Citrullus lanatus])

HSP 1 Score: 144.8 bits (364), Expect = 3.3e-31
Identity = 73/84 (86.90%), Postives = 73/84 (86.90%), Query Frame = 0


Query: 1  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNIC 60
          MKFFSAAILLLLLIFGTG          MEPIVVEARVCESLSHSFKGLCFSSTNCGNIC
Sbjct: 1  MKFFSAAILLLLLIFGTG----------MEPIVVEARVCESLSHSFKGLCFSSTNCGNIC 60

Query: 61 KTEGFTGGVCRGFRRRCFCTKHCV 85
          KTEGFTGGVCRGFRRRCFCTK CV
Sbjct: 61 KTEGFTGGVCRGFRRRCFCTKPCV 74

[Close]

BLAST of CmUC01G006910 vs. NCBI nr
Match: XP_016898837.1 (PREDICTED: defensin Ec-AMP-D2-like [Cucumis melo])

HSP 1 Score: 134.0 bits (336), Expect = 5.9e-28
Identity = 65/84 (77.38%), Postives = 69/84 (82.14%), Query Frame = 0


Query: 1  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNIC 60
          MKFFSAAI LLLLIFGTG          M P+V EARVCES SH+FKGLCFS TNCGNIC
Sbjct: 1  MKFFSAAIFLLLLIFGTG----------MAPMVAEARVCESPSHNFKGLCFSDTNCGNIC 60

Query: 61 KTEGFTGGVCRGFRRRCFCTKHCV 85
          KTEGF+GG+CRGFRRRCFCTKHCV
Sbjct: 61 KTEGFSGGLCRGFRRRCFCTKHCV 74

[Close]

BLAST of CmUC01G006910 vs. NCBI nr
Match: XP_004151187.1 (defensin Ec-AMP-D2 [Cucumis sativus])

HSP 1 Score: 131.7 bits (330), Expect = 2.9e-27
Identity = 64/84 (76.19%), Postives = 68/84 (80.95%), Query Frame = 0


Query: 1  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNIC 60
          MKFFSA I LLLLIFG+G          M P+V EARVCES SH+FKGLCFS TNCGNIC
Sbjct: 1  MKFFSAPIFLLLLIFGSG----------MAPMVAEARVCESPSHNFKGLCFSDTNCGNIC 60

Query: 61 KTEGFTGGVCRGFRRRCFCTKHCV 85
          KTEGF+GGVCRGFRRRCFCTKHCV
Sbjct: 61 KTEGFSGGVCRGFRRRCFCTKHCV 74

[Close]

BLAST of CmUC01G006910 vs. NCBI nr
Match: XP_022990901.1 (defensin Ec-AMP-D2-like [Cucurbita maxima])

HSP 1 Score: 127.1 bits (318), Expect = 7.2e-26
Identity = 64/89 (71.91%), Postives = 68/89 (76.40%), Query Frame = 0


Query: 1  MKFFSAAILLLLLIFGTGWFVCCHMIKR-----MEPIVVEARVCESLSHSFKGLCFSSTN 60
          MKFFSAAI LLLLIFGTG        +      M PIV EARVCES SH+FKG+CFS TN
Sbjct: 1  MKFFSAAIFLLLLIFGTGMAPMVSEARAFGGTGMGPIVAEARVCESQSHNFKGVCFSDTN 60

Query: 61 CGNICKTEGFTGGVCRGFRRRCFCTKHCV 85
          CG+ICKTEGF GG CRGFRRRCFCTKHCV
Sbjct: 61 CGSICKTEGFDGGHCRGFRRRCFCTKHCV 89

[Close]

BLAST of CmUC01G006910 vs. ExPASy Swiss-Prot
Match: O65740 (Defensin J1-2 OS=Capsicum annuum OX=4072 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 2.7e-20
Identity = 45/82 (54.88%), Postives = 55/82 (67.07%), Query Frame = 0


Query: 2  KFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICK 61
          K  +   L+++L+F TG             +V EAR CES SH FKGLCFS +NCG++C 
Sbjct: 6  KVIATIFLMMMLVFATG-------------MVAEARTCESQSHRFKGLCFSKSNCGSVCH 65

Query: 62 TEGFTGGVCRGFRRRCFCTKHC 84
          TEGF GG CRGFRRRCFCT+HC
Sbjct: 66 TEGFNGGHCRGFRRRCFCTRHC 74

[Close]

BLAST of CmUC01G006910 vs. ExPASy Swiss-Prot
Match: Q9ZUL7 (Defensin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=PDF2.3 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 8.0e-20
Identity = 45/83 (54.22%), Postives = 55/83 (66.27%), Query Frame = 0


Query: 1  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNIC 60
          ++F SAA+LL ++   TG          M P+ VEAR CES SH FKG C S+ NC N+C
Sbjct: 5  VRFISAALLLFMVFIATG----------MGPVTVEARTCESKSHRFKGPCVSTHNCANVC 64

Query: 61 KTEGFTGGVCRGFRRRCFCTKHC 84
            EGF GG CRGFRRRC+CT+HC
Sbjct: 65 HNEGFGGGKCRGFRRRCYCTRHC 77

[Close]

BLAST of CmUC01G006910 vs. ExPASy Swiss-Prot
Match: Q39182 (Defensin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=PDF2.2 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.0e-19
Identity = 43/83 (51.81%), Postives = 54/83 (65.06%), Query Frame = 0


Query: 1  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNIC 60
          M+  SA +++ ++   TG          M P+ VEAR CES SH FKG C S++NC N+C
Sbjct: 5  MRLISAVLIMFMIFVATG----------MGPVTVEARTCESQSHRFKGTCVSASNCANVC 64

Query: 61 KTEGFTGGVCRGFRRRCFCTKHC 84
            EGF GG CRGFRRRCFCT+HC
Sbjct: 65 HNEGFVGGNCRGFRRRCFCTRHC 77

[Close]

BLAST of CmUC01G006910 vs. ExPASy Swiss-Prot
Match: P82659 (Defensin SD2 OS=Helianthus annuus OX=4232 GN=SD2 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 8.8e-19
Identity = 46/84 (54.76%), Postives = 54/84 (64.29%), Query Frame = 0


Query: 1  MKFFSAAILLLLLIFGTGWFVCCHMIKRM-EPIVVEARVCESLSHSFKGLCFSSTNCGNI 60
          MK F+A +L+          V C +   M  P+VVEAR CES SH FKG C S TNC N+
Sbjct: 5  MKMFAALLLV----------VMCLLANEMGGPLVVEARTCESQSHKFKGTCLSDTNCANV 64

Query: 61 CKTEGFTGGVCRGFRRRCFCTKHC 84
          C +E F+GG CRGFRRRCFCT HC
Sbjct: 65 CHSERFSGGKCRGFRRRCFCTTHC 78

[Close]

BLAST of CmUC01G006910 vs. ExPASy Swiss-Prot
Match: Q41914 (Defensin-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=PDF2.1 PE=2 SV=2)

HSP 1 Score: 89.0 bits (219), Expect = 2.8e-17
Identity = 42/83 (50.60%), Postives = 51/83 (61.45%), Query Frame = 0


Query: 1  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNIC 60
          M+  SA + L+++   TG          M P+ VEAR C S S  FKG C S TNC N+C
Sbjct: 5  MRLISAVLFLVMIFVATG----------MGPVTVEARTCASQSQRFKGKCVSDTNCENVC 64

Query: 61 KTEGFTGGVCRGFRRRCFCTKHC 84
            EGF GG CRGFRRRCFCT++C
Sbjct: 65 HNEGFPGGDCRGFRRRCFCTRNC 77

[Close]

BLAST of CmUC01G006910 vs. ExPASy TrEMBL
Match: V5LF72 (Defensin-like protein 6 OS=Citrullus lanatus OX=3654 GN=PDF2.6 PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.1e-32
Identity = 74/84 (88.10%), Postives = 74/84 (88.10%), Query Frame = 0


Query: 1  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNIC 60
          MKFFSAAILLLLLIFGTG          MEPIVVEARVCESLSHSFKGLCFSSTNCGNIC
Sbjct: 1  MKFFSAAILLLLLIFGTG----------MEPIVVEARVCESLSHSFKGLCFSSTNCGNIC 60

Query: 61 KTEGFTGGVCRGFRRRCFCTKHCV 85
          KTEGFTGGVCRGFRRRCFCTKHCV
Sbjct: 61 KTEGFTGGVCRGFRRRCFCTKHCV 74

[Close]

BLAST of CmUC01G006910 vs. ExPASy TrEMBL
Match: V5LFZ0 (Defensin-like protein 5 OS=Citrullus lanatus OX=3654 GN=PDF2.5 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.6e-31
Identity = 73/84 (86.90%), Postives = 73/84 (86.90%), Query Frame = 0


Query: 1  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNIC 60
          MKFFSAAILLLLLIFGTG          MEPIVVEARVCESLSHSFKGLCFSSTNCGNIC
Sbjct: 1  MKFFSAAILLLLLIFGTG----------MEPIVVEARVCESLSHSFKGLCFSSTNCGNIC 60

Query: 61 KTEGFTGGVCRGFRRRCFCTKHCV 85
          KTEGFTGGVCRGFRRRCFCTK CV
Sbjct: 61 KTEGFTGGVCRGFRRRCFCTKPCV 74

[Close]

BLAST of CmUC01G006910 vs. ExPASy TrEMBL
Match: A0A1S4DS60 (defensin Ec-AMP-D2-like OS=Cucumis melo OX=3656 GN=LOC103483028 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.8e-28
Identity = 65/84 (77.38%), Postives = 69/84 (82.14%), Query Frame = 0


Query: 1  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNIC 60
          MKFFSAAI LLLLIFGTG          M P+V EARVCES SH+FKGLCFS TNCGNIC
Sbjct: 1  MKFFSAAIFLLLLIFGTG----------MAPMVAEARVCESPSHNFKGLCFSDTNCGNIC 60

Query: 61 KTEGFTGGVCRGFRRRCFCTKHCV 85
          KTEGF+GG+CRGFRRRCFCTKHCV
Sbjct: 61 KTEGFSGGLCRGFRRRCFCTKHCV 74

[Close]

BLAST of CmUC01G006910 vs. ExPASy TrEMBL
Match: A0A6J1JP84 (defensin Ec-AMP-D2-like OS=Cucurbita maxima OX=3661 GN=LOC111487651 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 3.5e-26
Identity = 64/89 (71.91%), Postives = 68/89 (76.40%), Query Frame = 0


Query: 1  MKFFSAAILLLLLIFGTGWFVCCHMIKR-----MEPIVVEARVCESLSHSFKGLCFSSTN 60
          MKFFSAAI LLLLIFGTG        +      M PIV EARVCES SH+FKG+CFS TN
Sbjct: 1  MKFFSAAIFLLLLIFGTGMAPMVSEARAFGGTGMGPIVAEARVCESQSHNFKGVCFSDTN 60

Query: 61 CGNICKTEGFTGGVCRGFRRRCFCTKHCV 85
          CG+ICKTEGF GG CRGFRRRCFCTKHCV
Sbjct: 61 CGSICKTEGFDGGHCRGFRRRCFCTKHCV 89

[Close]

BLAST of CmUC01G006910 vs. ExPASy TrEMBL
Match: V5LF08 (Defensin-like protein 4 OS=Citrullus lanatus OX=3654 GN=PDF2.4 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.7e-25
Identity = 58/67 (86.57%), Postives = 58/67 (86.57%), Query Frame = 0


Query: 20 FVCCHMI--KRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVCRGFRRRC 79
          F CC       MEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGG CRGFRRRC
Sbjct: 9  FCCCSSFFGTGMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGHCRGFRRRC 68

Query: 80 FCTKHCV 85
          FCTKHCV
Sbjct: 69 FCTKHCV 75

[Close]

BLAST of CmUC01G006910 vs. TAIR 10
Match: AT2G02130.1 (low-molecular-weight cysteine-rich 68 )

HSP 1 Score: 97.4 bits (241), Expect = 5.7e-21
Identity = 45/83 (54.22%), Postives = 55/83 (66.27%), Query Frame = 0


Query: 1  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNIC 60
          ++F SAA+LL ++   TG          M P+ VEAR CES SH FKG C S+ NC N+C
Sbjct: 5  VRFISAALLLFMVFIATG----------MGPVTVEARTCESKSHRFKGPCVSTHNCANVC 64

Query: 61 KTEGFTGGVCRGFRRRCFCTKHC 84
            EGF GG CRGFRRRC+CT+HC
Sbjct: 65 HNEGFGGGKCRGFRRRCYCTRHC 77

[Close]

BLAST of CmUC01G006910 vs. TAIR 10
Match: AT2G02100.1 (low-molecular-weight cysteine-rich 69 )

HSP 1 Score: 97.1 bits (240), Expect = 7.4e-21
Identity = 43/83 (51.81%), Postives = 54/83 (65.06%), Query Frame = 0


Query: 1  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNIC 60
          M+  SA +++ ++   TG          M P+ VEAR CES SH FKG C S++NC N+C
Sbjct: 5  MRLISAVLIMFMIFVATG----------MGPVTVEARTCESQSHRFKGTCVSASNCANVC 64

Query: 61 KTEGFTGGVCRGFRRRCFCTKHC 84
            EGF GG CRGFRRRCFCT+HC
Sbjct: 65 HNEGFVGGNCRGFRRRCFCTRHC 77

[Close]

BLAST of CmUC01G006910 vs. TAIR 10
Match: AT2G02120.1 (Scorpion toxin-like knottin superfamily protein )

HSP 1 Score: 89.0 bits (219), Expect = 2.0e-18
Identity = 42/83 (50.60%), Postives = 51/83 (61.45%), Query Frame = 0


Query: 1  MKFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNIC 60
          M+  SA + L+++   TG          M P+ VEAR C S S  FKG C S TNC N+C
Sbjct: 5  MRLISAVLFLVMIFVATG----------MGPVTVEARTCASQSQRFKGKCVSDTNCENVC 64

Query: 61 KTEGFTGGVCRGFRRRCFCTKHC 84
            EGF GG CRGFRRRCFCT++C
Sbjct: 65 HNEGFPGGDCRGFRRRCFCTRNC 77

[Close]

BLAST of CmUC01G006910 vs. TAIR 10
Match: AT1G61070.1 (low-molecular-weight cysteine-rich 66 )

HSP 1 Score: 77.4 bits (189), Expect = 6.1e-15
Identity = 38/79 (48.10%), Postives = 49/79 (62.03%), Query Frame = 0


Query: 5  SAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEG 64
          ++A+LLL +I  T           M  + VEAR CE+ S+ F G C SS+NC N+C  EG
Sbjct: 8  NSALLLLFMILAT----------VMGLVTVEARTCETSSNLFNGPCLSSSNCANVCHNEG 67

Query: 65 FTGGVCRGFRRRCFCTKHC 84
          F+ G CRGFRRRC CT+ C
Sbjct: 68 FSDGDCRGFRRRCLCTRPC 76

[Close]

BLAST of CmUC01G006910 vs. TAIR 10
Match: AT5G63660.1 (Scorpion toxin-like knottin superfamily protein )

HSP 1 Score: 72.8 bits (177), Expect = 1.5e-13
Identity = 37/82 (45.12%), Postives = 47/82 (57.32%), Query Frame = 0


Query: 2  KFFSAAILLLLLIFGTGWFVCCHMIKRMEPIVVEARVCESLSHSFKGLCFSSTNCGNICK 61
          KFF+A  LLL+L                E I  E R C+S SH FK +C S+ NC  +C+
Sbjct: 4  KFFAAFFLLLVL------------FSSQEIIGGEGRTCQSKSHHFKYMCTSNHNCAIVCR 63

Query: 62 TEGFTGGVCRGFRRRCFCTKHC 84
           EGF+GG C GF RRC+CT+ C
Sbjct: 64 NEGFSGGRCHGFHRRCYCTRLC 73

The following BLAST results are available for this feature:

BLAST of CmUC01G006910 vs. NCBI nr


Match Name	E-value	Identity	Description
AHA50473.1	2.3e-32	88.10	defensin-like protein 6 [Citrullus lanatus]	[more]
AHA50472.1	3.3e-31	86.90	defensin-like protein 5 [Citrullus lanatus]	[more]
XP_016898837.1	5.9e-28	77.38	PREDICTED: defensin Ec-AMP-D2-like [Cucumis melo]	[more]
XP_004151187.1	2.9e-27	76.19	defensin Ec-AMP-D2 [Cucumis sativus]	[more]
XP_022990901.1	7.2e-26	71.91	defensin Ec-AMP-D2-like [Cucurbita maxima]	[more]

BLAST of CmUC01G006910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65740	2.7e-20	54.88	Defensin J1-2 OS=Capsicum annuum OX=4072 PE=1 SV=1	[more]
Q9ZUL7	8.0e-20	54.22	Defensin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=PDF2.3 PE=2 SV=1	[more]
Q39182	1.0e-19	51.81	Defensin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=PDF2.2 PE=2 SV=1	[more]
P82659	8.8e-19	54.76	Defensin SD2 OS=Helianthus annuus OX=4232 GN=SD2 PE=2 SV=1	[more]
Q41914	2.8e-17	50.60	Defensin-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=PDF2.1 PE=2 SV=2	[more]

BLAST of CmUC01G006910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
V5LF72	1.1e-32	88.10	Defensin-like protein 6 OS=Citrullus lanatus OX=3654 GN=PDF2.6 PE=2 SV=1	[more]
V5LFZ0	1.6e-31	86.90	Defensin-like protein 5 OS=Citrullus lanatus OX=3654 GN=PDF2.5 PE=2 SV=1	[more]
A0A1S4DS60	2.8e-28	77.38	defensin Ec-AMP-D2-like OS=Cucumis melo OX=3656 GN=LOC103483028 PE=4 SV=1	[more]
A0A6J1JP84	3.5e-26	71.91	defensin Ec-AMP-D2-like OS=Cucurbita maxima OX=3661 GN=LOC111487651 PE=4 SV=1	[more]
V5LF08	1.7e-25	86.57	Defensin-like protein 4 OS=Citrullus lanatus OX=3654 GN=PDF2.4 PE=2 SV=1	[more]

BLAST of CmUC01G006910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02130.1	5.7e-21	54.22	low-molecular-weight cysteine-rich 68	[more]
AT2G02100.1	7.4e-21	51.81	low-molecular-weight cysteine-rich 69	[more]
AT2G02120.1	2.0e-18	50.60	Scorpion toxin-like knottin superfamily protein	[more]
AT1G61070.1	6.1e-15	48.10	low-molecular-weight cysteine-rich 66	[more]
AT5G63660.1	1.5e-13	45.12	Scorpion toxin-like knottin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008176	Defensin, plant	PRINTS	PR00288	PUROTHIONIN	coord: 38..53 score: 54.08 coord: 68..82 score: 60.29
IPR008176	Defensin, plant	PROSITE	PS00940	GAMMA_THIONIN	coord: 37..60
IPR003614	Knottin, scorpion toxin-like	SMART	SM00505	gth_4	coord: 38..83 e-value: 2.3E-11 score: 53.8
IPR003614	Knottin, scorpion toxin-like	CDD	cd00107	Knot1	coord: 48..80 e-value: 1.12425E-5 score: 36.5592
None	No IPR available	PFAM	PF00304	Gamma-thionin	coord: 37..83 e-value: 6.7E-17 score: 61.5
None	No IPR available	PANTHER	PTHR33147	DEFENSIN-LIKE PROTEIN 1	coord: 12..83
None	No IPR available	PANTHER	PTHR33147:SF81	DEFENSIN SD2	coord: 12..83
IPR036574	Knottin, scorpion toxin-like superfamily	GENE3D	3.30.30.10		coord: 32..84 e-value: 3.5E-20 score: 73.6
IPR036574	Knottin, scorpion toxin-like superfamily	SUPERFAMILY	57095	Scorpion toxin-like	coord: 37..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC01G006910.1	CmUC01G006910.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0031640	killing of cells of other organism
biological_process	GO:0006952	defense response