CmUC01G004060 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGCGGCACGTGTTTTGCTCCTCCCTTCTCTTGTCCGCAGCACGTTCGCCATTGTCGCTCCTCTCTTTTCTCGATCTGTTCGCGAAACTTGCTCTCAAGCAAACTCATTTCCAGATTCTCTTCTCTTCAATCTCTTCAATTTCATCTTCCCTTTTTTGATCCTGCTTCACTCTTCTCAACAATGAGTACGGGAGAACTCCTCAGCATCGAACCTCTCGAGCTCAAGTTTCCCTGTGAGTTCATCTTTTTTTTTTTTCTTTTCTTTTCTGGGAGATTTCCTTCTTGTGGATCTGTTTTCAGGGTTCTTTTTTGTCTTTTGTTTTGATTTCATTTCTGCTTAATTTGTTTTTGTTTTCTTTGTTTCTTTCTCGTTAGTCGAATTGAAGAAGCAGATCTCTTGTTCCCTTCAATTGTCTAACAAGACCGAGAGCTACGTTGCATTTAAGGTGTGTGTTTTGTTTCTTTCTGTTTGAATCCTTCTGGGTTTGATTCAATTTGTTTGATTTGCGTAATTGATCTTTTCTACTGTGAAATGCTTTGGTACTCGTAGTATTAAGCTGTTCTGTATTTGGAATGTAGGCGTCTGCACTCTTTTTTCTCATTTCTTTCGCCCTTCTCTCTTGATGTATCTGTCTGGCGTCAGATCATGTTGTGAAATTTGTTAATTTCGTCCATTTTCAATTAGCTTGTATTTGAATACTTTGTTCTATGTGTTTTGTCCACTTAAATTAAATTGATCCTTTTCTAGGTGAAAACTACGAACCCTAAAAAGTACTGCGTTCGCCCAAACACTGGAATTGTCTCTCCACGGTCAACATGTGACGTTATAGGTGCCAAATGCCAATATCACTTATTGTCATTCGTAGTTTTAAATTTTCAAATTAGTTTTTTGGTTACTGATATAGAGAGTACTTTGTTGTCTAGTCACCATGCAAGCCCAGAAAGAGGCTCCTGCTGATATGCAATGCAAAGACAAATTCCTTCTTCAGAGTGTTAAAACAGTTGATGGCGCAACTGCAAAGGATATCAACGCAGAAATGGTATATTTAGTGTGAATGTTTAAAGCTTCTGGTTAGTATTAGCATTCTACTTTTATTTATGGGCGTGGGGTTTGCAGTTCAATAAGGAGGCTGGGCATGTGGTTGAGGAATTCAAATTGAAAGTCGTTTATGTTTCTCCACCTCAACCACCTTCTCCAGTACCAGAAGGTTCTGAAGAAGGGTCCTCTCCAAGAGGTTCTGTTTCAGAGAATGGAAACTTCAATGATGCTGACTTGAATACTGTGAGTAGTTGGGTTCTCTTTTTTTCCTATTCGTTCTTCTGCACAGTTGATTGACACACCTTCACCTTCTGTTTGTAGGCTACAAGGGGATATGTTGAACGGTCGGAGCCGCAGGATAAATCTGCAGAGGTAAAATAATAGGAAGATTGTTGGTTTTCTATAGGTGTAAAGTTTTATGTCTGCAGATAATATAGATGATTCTCTCTTTTCTTTTTGGTAATTCTGATGCCTGATTTATGTGCTCTCTCTTTTCTATTCGGTAATTCTGATGCCTGATTTATGTGCATAGCTTGTGATGTAATTAAAATTTTCTCCTCCAAATTTCCATTTCTCTTATTATTATTATTATTATTTTTTATTAGATAGAACTCAATGCTAATGTGTGACCTTGTGATTGAAGTGTCACTCTGAGCAGTGAACAATAAAATTTTCTCGGGGCAGTATTCTATAGTAGTTAACTGTACACTTGTGAAGTTTTGGGTGAACTTGTTACATGATAGAAGTATTTGTTTTGTAAAGACTGCTCAAAATGGTTAGCTATACTTTAAGCATATTTTGTTGCATTCTAATCTTAAATGAAATCATTATGTTTCATTGTAGTTCTTAGTGTTAACATACAGGTGGATGCAACTTCCTTGGCATAATATTTGTAATACTTGAAGATTTACTTTTGAAATTTTGTTTAAACATGCTGAGTGCTTATTTTGTATGGATTTCTTATAATGGTTCGGTCATGTATATGATCTTTGATCATATTTCCTAACTTTAACGGAACCAGTATTACATGATAACAGTATTTTCATCACAAAACAATAAATTTAACATGATACTGCTATTGTTAATCTATGCATGGATACTGTTGGCATAATCTCGTCCCCAAGTATTGCAATATTGGGATAGAACTACCAAGAATTGCCTAGCAGGAAGAGGTAAAAGTGGATATTTTTGATGTCATAAGTTCAAGCCAGGATTATTTTACCTTTTCTCCAGTGCCAAATAAAGAGTTAGGATAGGATACATCCACTTGGAGAGAACCTTCCTGAACTGTTGACTTGAACGATCCTTTACCTATGAAAGAATGATGCTATATTCTTGTTTTGCTGCTGTGTATTAAACTCTTTCCAAAGTTTCCTGGCAACTAATCGATTCTCCAAAGTATGTTTTATGCATTCAGTTCGGTTTGCTTCTTCGATGAATGTTGTAAAATTCCCCATCTGTTCCTTGGCATGACTATCCAGTTAAATTTTCTAACACAGCTAATCAATCAGTTCTCTTTGCCAAAAGATAACTAAGCTAAGCTCAGGACCACCACACCCCCCCCCCCCCCCCCCCCCACCCAATAATAGACAGAAACTGCTTCAATCTTTCAAGATATAATTCCTTTTATGTGGTACTTCGTCCCTTTCCTGCAGAACTTTTTGTTGATACCTGAAAGTACTGTAATTCACAAGTCCAGTGACCCATGGATCTCTCGTTCTTGTTTCTTTAAACAAAAATGTTGATTTTCTTCTTTGTTTGTGCAATGTCCTCAAACTTTTATCATGGTTCTCAGATGTTTTTAAATTATTCGGCACTATGAAGATGGTTTGATTGACTAAATCCTGGGCCACTGCAGCTATTTGTGTACGTGTGTGTGCGTTTTCATGTATGCATATACTGTACTTTTTACTTCTAGCAGGATGCTTATTGACGGCTACTTAATATGTGCAGGCTAGAGCCCTCATAGCGAAACTCACAGAGGAAAAGAATAATGCCATACAACAGAATAACAAACTTCGTCAGGAATTGGTAAGAAGAATGATTTGAAGCTTCACTAGATGCAGTTTTGCTCAAGAAGTTTCATATATGATTCCATTGGAAACAACGCCTTTACTTTTGAGATATACTTGCTAAATCTCTAGCTCTCATTGCCTGAATAATACCACCTTTTGACGATTACGCAAAGGAAATATTTACTATAACATTTAACTTTCTTTGTACGGTTTCAAATAAGATTATACTCAATGATTCTCATTTTCTTGGAATATTAGAATAACAGGGTTGCATTAGTTTCTTATGGTCGAGGTTTGCATTTTGCAGGAACTCTTAAAGCATGATGGCAGGAAAAATGCCGGTGGCGTCTCGTTCCTGTTCGTCATATTAGTCGGATTGATCGGAATCTTCTTTGGCTATATTATTAAGAAGACTTGAGTATCTCTTTGCAGCAATCTGGATTTATATCATTATATTTTCTATGATGAAAGGAAAGGGAACTACTAATGTTCAGTGGGTGGATCTGTAGCAAGTTTTAATTTGTTGAAGTAGCAAAATTGTTAGGTGGTGTTCAAGAATTTGTAGTTGCTGAATTTGCAAGGTAGCACACTCTTTCTGTAACTTAAAAGAGTTTTTTTTTTTTTTTTTCTTTCCTTTTTTTTTTCTTTTCCATTTTTTCTCCCTCTGCCTCTCTTGCCATCCAACTTGTTATATTTTGTGAAACTGTTGATTTAATAATTTTACATCCCCAATTGTTCAGCATT GGCGGCACGTGTTTTGCTCCTCCCTTCTCTTGTCCGCAGCACGTTCGCCATTGTCGCTCCTCTCTTTTCTCGATCTGTTCGCGAAACTTGCTCTCAAGCAAACTCATTTCCAGATTCTCTTCTCTTCAATCTCTTCAATTTCATCTTCCCTTTTTTGATCCTGCTTCACTCTTCTCAACAATGAGTACGGGAGAACTCCTCAGCATCGAACCTCTCGAGCTCAAGTTTCCCTTCGAATTGAAGAAGCAGATCTCTTGTTCCCTTCAATTGTCTAACAAGACCGAGAGCTACGTTGCATTTAAGGTGAAAACTACGAACCCTAAAAAGTACTGCGTTCGCCCAAACACTGGAATTGTCTCTCCACGGTCAACATGTGACGTTATAGTCACCATGCAAGCCCAGAAAGAGGCTCCTGCTGATATGCAATGCAAAGACAAATTCCTTCTTCAGAGTGTTAAAACAGTTGATGGCGCAACTGCAAAGGATATCAACGCAGAAATGTTCAATAAGGAGGCTGGGCATGTGGTTGAGGAATTCAAATTGAAAGTCGTTTATGTTTCTCCACCTCAACCACCTTCTCCAGTACCAGAAGGTTCTGAAGAAGGGTCCTCTCCAAGAGGTTCTGTTTCAGAGAATGGAAACTTCAATGATGCTGACTTGAATACTGCTACAAGGGGATATGTTGAACGGTCGGAGCCGCAGGATAAATCTGCAGAGGCTAGAGCCCTCATAGCGAAACTCACAGAGGAAAAGAATAATGCCATACAACAGAATAACAAACTTCGTCAGGAATTGGAACTCTTAAAGCATGATGGCAGGAAAAATGCCGGTGGCGTCTCGTTCCTGTTCGTCATATTAGTCGGATTGATCGGAATCTTCTTTGGCTATATTATTAAGAAGACTTGAGTATCTCTTTGCAGCAATCTGGATTTATATCATTATATTTTCTATGATGAAAGGAAAGGGAACTACTAATGTTCAGTGGGTGGATCTGTAGCAAGTTTTAATTTGTTGAAGTAGCAAAATTGTTAGGTGGTGTTCAAGAATTTGTAGTTGCTGAATTTGCAAGGTAGCACACTCTTTCTGTAACTTAAAAGAGTTTTTTTTTTTTCTTTTCCATTTTTTCTCCCTCTGCCTCTCTTGCCATCCAACTTGTTATATTTTGTGAAACTGTTGATTTAATAATTTTACATCCCCAATTGTTCAGCATT ATGAGTACGGGAGAACTCCTCAGCATCGAACCTCTCGAGCTCAAGTTTCCCTTCGAATTGAAGAAGCAGATCTCTTGTTCCCTTCAATTGTCTAACAAGACCGAGAGCTACGTTGCATTTAAGGTGAAAACTACGAACCCTAAAAAGTACTGCGTTCGCCCAAACACTGGAATTGTCTCTCCACGGTCAACATGTGACGTTATAGTCACCATGCAAGCCCAGAAAGAGGCTCCTGCTGATATGCAATGCAAAGACAAATTCCTTCTTCAGAGTGTTAAAACAGTTGATGGCGCAACTGCAAAGGATATCAACGCAGAAATGTTCAATAAGGAGGCTGGGCATGTGGTTGAGGAATTCAAATTGAAAGTCGTTTATGTTTCTCCACCTCAACCACCTTCTCCAGTACCAGAAGGTTCTGAAGAAGGGTCCTCTCCAAGAGGTTCTGTTTCAGAGAATGGAAACTTCAATGATGCTGACTTGAATACTGCTACAAGGGGATATGTTGAACGGTCGGAGCCGCAGGATAAATCTGCAGAGGCTAGAGCCCTCATAGCGAAACTCACAGAGGAAAAGAATAATGCCATACAACAGAATAACAAACTTCGTCAGGAATTGGAACTCTTAAAGCATGATGGCAGGAAAAATGCCGGTGGCGTCTCGTTCCTGTTCGTCATATTAGTCGGATTGATCGGAATCTTCTTTGGCTATATTATTAAGAAGACTTGA MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTESYVAFKVKTTNPKKYCVRPNTGIVSPRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNFNDADLNTATRGYVERSEPQDKSAEARALIAKLTEEKNNAIQQNNKLRQELELLKHDGRKNAGGVSFLFVILVGLIGIFFGYIIKKT Homology
BLAST of CmUC01G004060 vs. NCBI nr
Match: XP_038874712.1 (vesicle-associated protein 1-2 [Benincasa hispida]) HSP 1 Score: 450.3 bits (1157), Expect = 1.1e-122 Identity = 235/241 (97.51%), Postives = 236/241 (97.93%), Query Frame = 0
BLAST of CmUC01G004060 vs. NCBI nr
Match: XP_008437092.1 (PREDICTED: vesicle-associated protein 1-2 [Cucumis melo] >KAA0039712.1 vesicle-associated protein 1-2 [Cucumis melo var. makuwa]) HSP 1 Score: 446.4 bits (1147), Expect = 1.5e-121 Identity = 231/241 (95.85%), Postives = 236/241 (97.93%), Query Frame = 0
BLAST of CmUC01G004060 vs. NCBI nr
Match: XP_022154809.1 (vesicle-associated protein 1-2 isoform X2 [Momordica charantia]) HSP 1 Score: 443.0 bits (1138), Expect = 1.7e-120 Identity = 229/241 (95.02%), Postives = 235/241 (97.51%), Query Frame = 0
BLAST of CmUC01G004060 vs. NCBI nr
Match: XP_004152405.1 (vesicle-associated protein 1-2 [Cucumis sativus] >KGN50249.1 hypothetical protein Csa_000538 [Cucumis sativus]) HSP 1 Score: 440.3 bits (1131), Expect = 1.1e-119 Identity = 229/240 (95.42%), Postives = 232/240 (96.67%), Query Frame = 0
BLAST of CmUC01G004060 vs. NCBI nr
Match: XP_022154808.1 (vesicle-associated protein 1-2 isoform X1 [Momordica charantia]) HSP 1 Score: 438.3 bits (1126), Expect = 4.2e-119 Identity = 229/242 (94.63%), Postives = 235/242 (97.11%), Query Frame = 0
BLAST of CmUC01G004060 vs. ExPASy Swiss-Prot
Match: Q9SHC8 (Vesicle-associated protein 1-2 OS=Arabidopsis thaliana OX=3702 GN=PVA12 PE=1 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 1.3e-83 Identity = 160/240 (66.67%), Postives = 199/240 (82.92%), Query Frame = 0
BLAST of CmUC01G004060 vs. ExPASy Swiss-Prot
Match: Q8VZ95 (Vesicle-associated protein 1-1 OS=Arabidopsis thaliana OX=3702 GN=PVA11 PE=1 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 2.3e-80 Identity = 157/243 (64.61%), Postives = 201/243 (82.72%), Query Frame = 0
BLAST of CmUC01G004060 vs. ExPASy Swiss-Prot
Match: Q84WW5 (Vesicle-associated protein 1-3 OS=Arabidopsis thaliana OX=3702 GN=PVA13 PE=2 SV=1) HSP 1 Score: 266.9 bits (681), Expect = 2.2e-70 Identity = 144/242 (59.50%), Postives = 189/242 (78.10%), Query Frame = 0
BLAST of CmUC01G004060 vs. ExPASy Swiss-Prot
Match: Q9SYC9 (Vesicle-associated protein 1-4 OS=Arabidopsis thaliana OX=3702 GN=PVA14 PE=2 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 2.0e-52 Identity = 102/154 (66.23%), Postives = 126/154 (81.82%), Query Frame = 0
BLAST of CmUC01G004060 vs. ExPASy Swiss-Prot
Match: O82213 (Vesicle-associated protein 3-1 OS=Arabidopsis thaliana OX=3702 GN=PVA31 PE=3 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 7.3e-42 Identity = 83/126 (65.87%), Postives = 102/126 (80.95%), Query Frame = 0
BLAST of CmUC01G004060 vs. ExPASy TrEMBL
Match: A0A5A7T8A8 (Vesicle-associated protein 1-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold558G00430 PE=4 SV=1) HSP 1 Score: 446.4 bits (1147), Expect = 7.4e-122 Identity = 231/241 (95.85%), Postives = 236/241 (97.93%), Query Frame = 0
BLAST of CmUC01G004060 vs. ExPASy TrEMBL
Match: A0A1S3ATQ2 (vesicle-associated protein 1-2 OS=Cucumis melo OX=3656 GN=LOC103482614 PE=4 SV=1) HSP 1 Score: 446.4 bits (1147), Expect = 7.4e-122 Identity = 231/241 (95.85%), Postives = 236/241 (97.93%), Query Frame = 0
BLAST of CmUC01G004060 vs. ExPASy TrEMBL
Match: A0A6J1DN99 (vesicle-associated protein 1-2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021973 PE=4 SV=1) HSP 1 Score: 443.0 bits (1138), Expect = 8.2e-121 Identity = 229/241 (95.02%), Postives = 235/241 (97.51%), Query Frame = 0
BLAST of CmUC01G004060 vs. ExPASy TrEMBL
Match: A0A0A0KMX3 (MSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G161980 PE=4 SV=1) HSP 1 Score: 440.3 bits (1131), Expect = 5.3e-120 Identity = 229/240 (95.42%), Postives = 232/240 (96.67%), Query Frame = 0
BLAST of CmUC01G004060 vs. ExPASy TrEMBL
Match: A0A6J1DLB2 (vesicle-associated protein 1-2 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021973 PE=4 SV=1) HSP 1 Score: 438.3 bits (1126), Expect = 2.0e-119 Identity = 229/242 (94.63%), Postives = 235/242 (97.11%), Query Frame = 0
BLAST of CmUC01G004060 vs. TAIR 10
Match: AT2G45140.1 (plant VAP homolog 12 ) HSP 1 Score: 310.8 bits (795), Expect = 9.3e-85 Identity = 160/240 (66.67%), Postives = 199/240 (82.92%), Query Frame = 0
BLAST of CmUC01G004060 vs. TAIR 10
Match: AT3G60600.1 (vesicle associated protein ) HSP 1 Score: 300.1 bits (767), Expect = 1.6e-81 Identity = 157/243 (64.61%), Postives = 201/243 (82.72%), Query Frame = 0
BLAST of CmUC01G004060 vs. TAIR 10
Match: AT4G00170.1 (Plant VAMP (vesicle-associated membrane protein) family protein ) HSP 1 Score: 266.9 bits (681), Expect = 1.5e-71 Identity = 144/242 (59.50%), Postives = 189/242 (78.10%), Query Frame = 0
BLAST of CmUC01G004060 vs. TAIR 10
Match: AT3G60600.3 (vesicle associated protein ) HSP 1 Score: 238.8 bits (608), Expect = 4.5e-63 Identity = 123/175 (70.29%), Postives = 143/175 (81.71%), Query Frame = 0
BLAST of CmUC01G004060 vs. TAIR 10
Match: AT3G60600.2 (vesicle associated protein ) HSP 1 Score: 237.7 bits (605), Expect = 1.0e-62 Identity = 117/154 (75.97%), Postives = 136/154 (88.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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