CmUC01G002360 (gene) Watermelon (USVL531) v1

Overview
NameCmUC01G002360
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionLEA_2 domain-containing protein
LocationCmU531Chr01: 2104313 .. 2104945 (-)
RNA-Seq ExpressionCmUC01G002360
SyntenyCmUC01G002360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGAAGACAGCCAGAGCTTTCCATTAGCGCACTACCAAGCTCACCACAAATCCGACCAAGAACAACAACTCGCCACTTTCAAAACTCTCCGAAAAGAACGATCCAACAAATGTTTCATCTACATCTTCTCCGCCTTCGTCTTCCTCAGCGTCGCTGTTCTAATCTTCGCTCTCATCGTCCTCCGCCTCAATTCCCCTTCCATCCGCCTCTCTTCCGTCTCAATCCCTAAGTTTTCCATTACTAACGCCAATTCCTCTTCTCCTTCGCTTAATCTCACCTTAATCGCCGAATTCACCGTCGATAATTCCAACTTCGGTCCTTTCGATTTCGACAACGGCACCGTGGGTCTCATGTATGGCAGCGCCATCATCGGTGAGAGGAGTACCGGCGCTGGAAGAGCCGAGGCCAAGGGGAGTATGAGGATGAATGTTACTGTGGAAGCTTCGGCGAAGAATATCAGCGGTGATTCGAATAATTTGGGGATTTTGAATCTGAGTAGCTTTGCGAAACTGAGAGGCAGAGTTCGTTTGATTCATATTTTTAGGAGGAGGATTTCGTCGGAGGTTAGCTGTTCTATGAATCTCGATTTGAATACTCATCAAATTCAGCATAATTGGGTTTGTGAGTAG

mRNA sequence

ATGGTGGAAGACAGCCAGAGCTTTCCATTAGCGCACTACCAAGCTCACCACAAATCCGACCAAGAACAACAACTCGCCACTTTCAAAACTCTCCGAAAAGAACGATCCAACAAATGTTTCATCTACATCTTCTCCGCCTTCGTCTTCCTCAGCGTCGCTGTTCTAATCTTCGCTCTCATCGTCCTCCGCCTCAATTCCCCTTCCATCCGCCTCTCTTCCGTCTCAATCCCTAAGTTTTCCATTACTAACGCCAATTCCTCTTCTCCTTCGCTTAATCTCACCTTAATCGCCGAATTCACCGTCGATAATTCCAACTTCGGTCCTTTCGATTTCGACAACGGCACCGTGGGTCTCATGTATGGCAGCGCCATCATCGGTGAGAGGAGTACCGGCGCTGGAAGAGCCGAGGCCAAGGGGAGTATGAGGATGAATGTTACTGTGGAAGCTTCGGCGAAGAATATCAGCGGTGATTCGAATAATTTGGGGATTTTGAATCTGAGTAGCTTTGCGAAACTGAGAGGCAGAGTTCGTTTGATTCATATTTTTAGGAGGAGGATTTCGTCGGAGGTTAGCTGTTCTATGAATCTCGATTTGAATACTCATCAAATTCAGCATAATTGGGTTTGTGAGTAG

Coding sequence (CDS)

ATGGTGGAAGACAGCCAGAGCTTTCCATTAGCGCACTACCAAGCTCACCACAAATCCGACCAAGAACAACAACTCGCCACTTTCAAAACTCTCCGAAAAGAACGATCCAACAAATGTTTCATCTACATCTTCTCCGCCTTCGTCTTCCTCAGCGTCGCTGTTCTAATCTTCGCTCTCATCGTCCTCCGCCTCAATTCCCCTTCCATCCGCCTCTCTTCCGTCTCAATCCCTAAGTTTTCCATTACTAACGCCAATTCCTCTTCTCCTTCGCTTAATCTCACCTTAATCGCCGAATTCACCGTCGATAATTCCAACTTCGGTCCTTTCGATTTCGACAACGGCACCGTGGGTCTCATGTATGGCAGCGCCATCATCGGTGAGAGGAGTACCGGCGCTGGAAGAGCCGAGGCCAAGGGGAGTATGAGGATGAATGTTACTGTGGAAGCTTCGGCGAAGAATATCAGCGGTGATTCGAATAATTTGGGGATTTTGAATCTGAGTAGCTTTGCGAAACTGAGAGGCAGAGTTCGTTTGATTCATATTTTTAGGAGGAGGATTTCGTCGGAGGTTAGCTGTTCTATGAATCTCGATTTGAATACTCATCAAATTCAGCATAATTGGGTTTGTGAGTAG

Protein sequence

MVEDSQSFPLAHYQAHHKSDQEQQLATFKTLRKERSNKCFIYIFSAFVFLSVAVLIFALIVLRLNSPSIRLSSVSIPKFSITNANSSSPSLNLTLIAEFTVDNSNFGPFDFDNGTVGLMYGSAIIGERSTGAGRAEAKGSMRMNVTVEASAKNISGDSNNLGILNLSSFAKLRGRVRLIHIFRRRISSEVSCSMNLDLNTHQIQHNWVCE
Homology
BLAST of CmUC01G002360 vs. NCBI nr
Match: XP_038875090.1 (late embryogenesis abundant protein At1g64065 [Benincasa hispida])

HSP 1 Score: 369.0 bits (946), Expect = 2.7e-98
Identity = 190/210 (90.48%), Postives = 204/210 (97.14%), Query Frame = 0

Query: 1   MVEDSQSFPLAHYQAHHKSDQEQQLATFKTLRKERSNKCFIYIFSAFVFLSVAVLIFALI 60
           MVEDSQSFPLAHYQAHHKSD+EQQLATFKTLRKERSNKCFIY+FS FVFLSVAVLIFALI
Sbjct: 1   MVEDSQSFPLAHYQAHHKSDEEQQLATFKTLRKERSNKCFIYVFSTFVFLSVAVLIFALI 60

Query: 61  VLRLNSPSIRLSSVSIPKFSITNANSSSPSLNLTLIAEFTVDNSNFGPFDFDNGTVGLMY 120
           VLR+NSPSI+LSSVSIPKFSITNANSSSPSLNLT+IAEFTVDNSNFGPF+FDNGTVGLMY
Sbjct: 61  VLRVNSPSIQLSSVSIPKFSITNANSSSPSLNLTMIAEFTVDNSNFGPFNFDNGTVGLMY 120

Query: 121 GSAIIGERSTGAGRAEAKGSMRMNVTVEASAKNISGDSNNLGILNLSSFAKLRGRVRLIH 180
           G AI+GE+STGAGRAEAKGS RMNVT+EASAKNIS DSNNLGILNL+SF KLRGRVRLIH
Sbjct: 121 GGAIVGEKSTGAGRAEAKGSKRMNVTMEASAKNISSDSNNLGILNLNSFVKLRGRVRLIH 180

Query: 181 IFRRRISSEVSCSMNLDLNTHQIQHNWVCE 211
           IFRRR SSE++CSMNLD+NTHQIQ+NWVCE
Sbjct: 181 IFRRRTSSEITCSMNLDMNTHQIQYNWVCE 210

BLAST of CmUC01G002360 vs. NCBI nr
Match: XP_008437349.1 (PREDICTED: late embryogenesis abundant protein At1g64065 [Cucumis melo])

HSP 1 Score: 327.0 bits (837), Expect = 1.2e-85
Identity = 175/212 (82.55%), Postives = 192/212 (90.57%), Query Frame = 0

Query: 1   MVEDSQSFPLAHYQAHHKSDQEQQLATFKTLRKERSNKCFIYIFSAFVFLSVAVLIFALI 60
           M EDSQSFPLAHYQAHHK+D+EQQLATFKTL KERSNKCFIYIFS FVFLSVA+LIFALI
Sbjct: 1   MGEDSQSFPLAHYQAHHKTDEEQQLATFKTLHKERSNKCFIYIFSTFVFLSVALLIFALI 60

Query: 61  VLRLNSPSIRLSSVSIPKFSITNA-NSSSP-SLNLTLIAEFTVDNSNFGPFDFDNGTVGL 120
           VLR+NSPSI LS+VSIPKFS++NA NSSSP SL+L+  A FTVDNSNFGPF+FDNGTVGL
Sbjct: 61  VLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFTVDNSNFGPFNFDNGTVGL 120

Query: 121 MYGSAIIGERSTGAGRAEAKGSMRMNVTVEASAKNISGDSNNLGILNLSSFAKLRGRVRL 180
           +YG  I GERSTG GRAEAKGS RMNVTVE SAKN+SG +   GIL+LSSF KLRGRVRL
Sbjct: 121 VYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVSGSN---GILSLSSFVKLRGRVRL 180

Query: 181 IHIFRRRISSEVSCSMNLDLNTHQIQHNWVCE 211
           IH+FRRR+SSE+SCSMNLDLNTHQIQHNWVCE
Sbjct: 181 IHVFRRRVSSEISCSMNLDLNTHQIQHNWVCE 209

BLAST of CmUC01G002360 vs. NCBI nr
Match: KAA0042716.1 (late embryogenesis abundant protein [Cucumis melo var. makuwa])

HSP 1 Score: 324.7 bits (831), Expect = 5.8e-85
Identity = 174/212 (82.08%), Postives = 191/212 (90.09%), Query Frame = 0

Query: 1   MVEDSQSFPLAHYQAHHKSDQEQQLATFKTLRKERSNKCFIYIFSAFVFLSVAVLIFALI 60
           M EDSQSFPLAHYQAHHK+D+EQQLATFKTL KERSNKCFIYIFS FVFLSVA+LIFALI
Sbjct: 1   MGEDSQSFPLAHYQAHHKTDEEQQLATFKTLHKERSNKCFIYIFSTFVFLSVALLIFALI 60

Query: 61  VLRLNSPSIRLSSVSIPKFSITNA-NSSSP-SLNLTLIAEFTVDNSNFGPFDFDNGTVGL 120
           VLR+NSPSI LS+VSIPKFS++NA NSSSP SL+L+  A F VDNSNFGPF+FDNGTVGL
Sbjct: 61  VLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFIVDNSNFGPFNFDNGTVGL 120

Query: 121 MYGSAIIGERSTGAGRAEAKGSMRMNVTVEASAKNISGDSNNLGILNLSSFAKLRGRVRL 180
           +YG  I GERSTG GRAEAKGS RMNVTVE SAKN+SG +   GIL+LSSF KLRGRVRL
Sbjct: 121 VYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVSGSN---GILSLSSFVKLRGRVRL 180

Query: 181 IHIFRRRISSEVSCSMNLDLNTHQIQHNWVCE 211
           IH+FRRR+SSE+SCSMNLDLNTHQIQHNWVCE
Sbjct: 181 IHVFRRRVSSEISCSMNLDLNTHQIQHNWVCE 209

BLAST of CmUC01G002360 vs. NCBI nr
Match: XP_004143966.1 (late embryogenesis abundant protein At1g64065 [Cucumis sativus])

HSP 1 Score: 318.5 bits (815), Expect = 4.2e-83
Identity = 172/212 (81.13%), Postives = 187/212 (88.21%), Query Frame = 0

Query: 1   MVEDSQSFPLAHYQAHHKSDQEQQLATFKTLRKERSNKCFIYIFSAFVFLSVAVLIFALI 60
           M EDSQSFPLAHYQAHHK ++EQQLATFK LRKERSNKCFIYIFS FVFLSVA+LIFALI
Sbjct: 1   MGEDSQSFPLAHYQAHHKPNEEQQLATFKILRKERSNKCFIYIFSTFVFLSVALLIFALI 60

Query: 61  VLRLNSPSIRLSSVSIPKFSIT-NANSSSP-SLNLTLIAEFTVDNSNFGPFDFDNGTVGL 120
           VLR+NSPSI LSS+S P+ S++ N NSSSP SLNL+  AEFTVDNSNFGPF+FDNGTVGL
Sbjct: 61  VLRVNSPSISLSSISNPRVSLSNNTNSSSPNSLNLSFNAEFTVDNSNFGPFNFDNGTVGL 120

Query: 121 MYGSAIIGERSTGAGRAEAKGSMRMNVTVEASAKNISGDSNNLGILNLSSFAKLRGRVRL 180
           +YG  I GERSTG GRA AKGS RMNVTVE SAKN+SG +   GILN SSF KLRGRVRL
Sbjct: 121 VYGGMIFGERSTGGGRAGAKGSKRMNVTVEGSAKNVSGSN---GILNFSSFVKLRGRVRL 180

Query: 181 IHIFRRRISSEVSCSMNLDLNTHQIQHNWVCE 211
           IHIFRRR+SSE+SCSMNLDLNTHQIQHNWVCE
Sbjct: 181 IHIFRRRVSSEISCSMNLDLNTHQIQHNWVCE 209

BLAST of CmUC01G002360 vs. NCBI nr
Match: KAE8647845.1 (hypothetical protein Csa_000600 [Cucumis sativus])

HSP 1 Score: 312.0 bits (798), Expect = 3.9e-81
Identity = 170/212 (80.19%), Postives = 185/212 (87.26%), Query Frame = 0

Query: 1   MVEDSQSFPLAHYQAHHKSDQEQQLATFKTLRKERSNKCFIYIFSAFVFLSVAVLIFALI 60
           M EDSQSFPLAHYQAHHK ++EQQLATFK LRKERSNKCFIYIFS FVFLSVA+LIFALI
Sbjct: 1   MGEDSQSFPLAHYQAHHKPNEEQQLATFKILRKERSNKCFIYIFSTFVFLSVALLIFALI 60

Query: 61  VLRLNSPSIRLSSVSIPKFSIT-NANSSSP-SLNLTLIAEFTVDNSNFGPFDFDNGTVGL 120
           VLR+NSPSI LSS+S P+ S++ N NSSSP SLNL+  AEFTVDNSNFGPF+FDNGTVGL
Sbjct: 61  VLRVNSPSISLSSISNPRVSLSNNTNSSSPNSLNLSFNAEFTVDNSNFGPFNFDNGTVGL 120

Query: 121 MYGSAIIGERSTGAGRAEAKGSMRMNVTVEASAKNISGDSNNLGILNLSSFAKLRGRVRL 180
           +YG  I GERSTG GRA AKGS RMNVTVE SAKN+SG +   GILN SSF KLRGRVRL
Sbjct: 121 VYGGMIFGERSTGGGRAGAKGSKRMNVTVEGSAKNVSGSN---GILNFSSFVKLRGRVRL 180

Query: 181 IHIFRRRISSEVSCSMNLDLNTHQIQHNWVCE 211
           IHIFRRR+SSE+SCSMNLDLNTHQIQHNW  E
Sbjct: 181 IHIFRRRVSSEISCSMNLDLNTHQIQHNWRLE 209

BLAST of CmUC01G002360 vs. ExPASy Swiss-Prot
Match: Q6DST1 (Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana OX=3702 GN=At1g64065 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 6.6e-15
Identity = 68/216 (31.48%), Postives = 116/216 (53.70%), Query Frame = 0

Query: 4   DSQSFPLAHYQAHHKSDQEQQ-LATFKTLRKERSNKCFIYIFSAFVFLSVAVLIFALIVL 63
           D     LA  + + +SD+EQ     ++   +E   KC +Y  +  V +    LI + I L
Sbjct: 3   DEDRITLAPTEIYGRSDEEQSGPRIWRRKTEEPPGKCLVYSLTIIVIIFALCLILSSIFL 62

Query: 64  RLNSPSIRLSSVSIPKFSITNANSSSPSLNLTLIAEFTVDNSNFGPFDFDNGTVGLMYGS 123
           R++ P I   S+S      +  NS++P  N TL+++ ++ NSNFG F+F++ T+ ++Y  
Sbjct: 63  RISKPEIETRSISTRDLR-SGGNSTNPYFNATLVSDISIRNSNFGAFEFEDSTLRVVYAD 122

Query: 124 -AIIGERSTGAGRAEAKGSMRM-NVTVEASA------KNISGDSNNLGILNLSSFAKLRG 183
             ++GE      R EA  ++R+  V VE  +      K++  D   LG L L S A++RG
Sbjct: 123 HGVVGETKIEGRRVEAHKTVRITGVVVEIGSFRLLDTKDLDKDL-RLGFLELRSVAEVRG 182

Query: 184 RVRLIHIFRRRISSEVSCSMNLDLNTHQIQHNWVCE 211
           R++++   R ++ S +SC+M L+L    IQ N +CE
Sbjct: 183 RIKVLGRKRWKV-SVMSCTMRLNLTGRFIQ-NLLCE 214

BLAST of CmUC01G002360 vs. ExPASy TrEMBL
Match: A0A1S3ATY3 (late embryogenesis abundant protein At1g64065 OS=Cucumis melo OX=3656 GN=LOC103482793 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 5.7e-86
Identity = 175/212 (82.55%), Postives = 192/212 (90.57%), Query Frame = 0

Query: 1   MVEDSQSFPLAHYQAHHKSDQEQQLATFKTLRKERSNKCFIYIFSAFVFLSVAVLIFALI 60
           M EDSQSFPLAHYQAHHK+D+EQQLATFKTL KERSNKCFIYIFS FVFLSVA+LIFALI
Sbjct: 1   MGEDSQSFPLAHYQAHHKTDEEQQLATFKTLHKERSNKCFIYIFSTFVFLSVALLIFALI 60

Query: 61  VLRLNSPSIRLSSVSIPKFSITNA-NSSSP-SLNLTLIAEFTVDNSNFGPFDFDNGTVGL 120
           VLR+NSPSI LS+VSIPKFS++NA NSSSP SL+L+  A FTVDNSNFGPF+FDNGTVGL
Sbjct: 61  VLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFTVDNSNFGPFNFDNGTVGL 120

Query: 121 MYGSAIIGERSTGAGRAEAKGSMRMNVTVEASAKNISGDSNNLGILNLSSFAKLRGRVRL 180
           +YG  I GERSTG GRAEAKGS RMNVTVE SAKN+SG +   GIL+LSSF KLRGRVRL
Sbjct: 121 VYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVSGSN---GILSLSSFVKLRGRVRL 180

Query: 181 IHIFRRRISSEVSCSMNLDLNTHQIQHNWVCE 211
           IH+FRRR+SSE+SCSMNLDLNTHQIQHNWVCE
Sbjct: 181 IHVFRRRVSSEISCSMNLDLNTHQIQHNWVCE 209

BLAST of CmUC01G002360 vs. ExPASy TrEMBL
Match: A0A5A7TL68 (Late embryogenesis abundant protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002140 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.8e-85
Identity = 174/212 (82.08%), Postives = 191/212 (90.09%), Query Frame = 0

Query: 1   MVEDSQSFPLAHYQAHHKSDQEQQLATFKTLRKERSNKCFIYIFSAFVFLSVAVLIFALI 60
           M EDSQSFPLAHYQAHHK+D+EQQLATFKTL KERSNKCFIYIFS FVFLSVA+LIFALI
Sbjct: 1   MGEDSQSFPLAHYQAHHKTDEEQQLATFKTLHKERSNKCFIYIFSTFVFLSVALLIFALI 60

Query: 61  VLRLNSPSIRLSSVSIPKFSITNA-NSSSP-SLNLTLIAEFTVDNSNFGPFDFDNGTVGL 120
           VLR+NSPSI LS+VSIPKFS++NA NSSSP SL+L+  A F VDNSNFGPF+FDNGTVGL
Sbjct: 61  VLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFIVDNSNFGPFNFDNGTVGL 120

Query: 121 MYGSAIIGERSTGAGRAEAKGSMRMNVTVEASAKNISGDSNNLGILNLSSFAKLRGRVRL 180
           +YG  I GERSTG GRAEAKGS RMNVTVE SAKN+SG +   GIL+LSSF KLRGRVRL
Sbjct: 121 VYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVSGSN---GILSLSSFVKLRGRVRL 180

Query: 181 IHIFRRRISSEVSCSMNLDLNTHQIQHNWVCE 211
           IH+FRRR+SSE+SCSMNLDLNTHQIQHNWVCE
Sbjct: 181 IHVFRRRVSSEISCSMNLDLNTHQIQHNWVCE 209

BLAST of CmUC01G002360 vs. ExPASy TrEMBL
Match: A0A0A0KQT7 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152160 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 2.0e-83
Identity = 172/212 (81.13%), Postives = 187/212 (88.21%), Query Frame = 0

Query: 1   MVEDSQSFPLAHYQAHHKSDQEQQLATFKTLRKERSNKCFIYIFSAFVFLSVAVLIFALI 60
           M EDSQSFPLAHYQAHHK ++EQQLATFK LRKERSNKCFIYIFS FVFLSVA+LIFALI
Sbjct: 1   MGEDSQSFPLAHYQAHHKPNEEQQLATFKILRKERSNKCFIYIFSTFVFLSVALLIFALI 60

Query: 61  VLRLNSPSIRLSSVSIPKFSIT-NANSSSP-SLNLTLIAEFTVDNSNFGPFDFDNGTVGL 120
           VLR+NSPSI LSS+S P+ S++ N NSSSP SLNL+  AEFTVDNSNFGPF+FDNGTVGL
Sbjct: 61  VLRVNSPSISLSSISNPRVSLSNNTNSSSPNSLNLSFNAEFTVDNSNFGPFNFDNGTVGL 120

Query: 121 MYGSAIIGERSTGAGRAEAKGSMRMNVTVEASAKNISGDSNNLGILNLSSFAKLRGRVRL 180
           +YG  I GERSTG GRA AKGS RMNVTVE SAKN+SG +   GILN SSF KLRGRVRL
Sbjct: 121 VYGGMIFGERSTGGGRAGAKGSKRMNVTVEGSAKNVSGSN---GILNFSSFVKLRGRVRL 180

Query: 181 IHIFRRRISSEVSCSMNLDLNTHQIQHNWVCE 211
           IHIFRRR+SSE+SCSMNLDLNTHQIQHNWVCE
Sbjct: 181 IHIFRRRVSSEISCSMNLDLNTHQIQHNWVCE 209

BLAST of CmUC01G002360 vs. ExPASy TrEMBL
Match: A0A6J1I3M2 (uncharacterized protein LOC111468875 OS=Cucurbita maxima OX=3661 GN=LOC111468875 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 4.0e-79
Identity = 157/212 (74.06%), Postives = 184/212 (86.79%), Query Frame = 0

Query: 1   MVEDSQSFPLAHYQAHHKSDQEQQ--LATFKTLRKERSNKCFIYIFSAFVFLSVAVLIFA 60
           M +DSQSFP+AHY+AHHKSD+EQ+  L TFK L+KERSNKCFIY+FSAFVFLSVAVLIFA
Sbjct: 1   MADDSQSFPIAHYKAHHKSDEEQRRHLTTFKALQKERSNKCFIYVFSAFVFLSVAVLIFA 60

Query: 61  LIVLRLNSPSIRLSSVSIPKFSITNANSSSPSLNLTLIAEFTVDNSNFGPFDFDNGTVGL 120
           LIVLR+NSP++  SS+S+ KFS++N NSSSPSLNLT+ A+  VDNSNFGPF+FD  +VG 
Sbjct: 61  LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDYASVGF 120

Query: 121 MYGSAIIGERSTGAGRAEAKGSMRMNVTVEASAKNISGDSNNLGILNLSSFAKLRGRVRL 180
           +Y  AI+G+ +TGAGRA+AKG+  MNVTV+ASA NIS D NN  +LNLSSFA LRGRVRL
Sbjct: 121 IYAGAIVGQSTTGAGRAKAKGTKTMNVTVQASANNISADYNNSRLLNLSSFANLRGRVRL 180

Query: 181 IHIFRRRISSEVSCSMNLDLNTHQIQHNWVCE 211
           IHIFRRR SSE+SCSM LDLNTHQIQHNWVCE
Sbjct: 181 IHIFRRRASSEISCSMILDLNTHQIQHNWVCE 212

BLAST of CmUC01G002360 vs. ExPASy TrEMBL
Match: A0A6J1H2C0 (uncharacterized protein LOC111459739 OS=Cucurbita moschata OX=3662 GN=LOC111459739 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 2.3e-66
Identity = 142/210 (67.62%), Postives = 165/210 (78.57%), Query Frame = 0

Query: 1   MVEDSQSFPLAHYQAHHKSDQEQQLATFKTLRKERSNKCFIYIFSAFVFLSVAVLIFALI 60
           M E S SFPL H QAHH           KT + E SNKCFIYIFS+FVFL VA+LIF+LI
Sbjct: 1   MGEHSHSFPLPHSQAHH-----------KTPKNEPSNKCFIYIFSSFVFLCVALLIFSLI 60

Query: 61  VLRLNSPSIRLSSVSIPKFSITNANSSSPSLNLTLIAEFTVDNSNFGPFDFDNGTVGLMY 120
           VLR+NSP+I LSS+S+ KFSI+N NSSS SLNLTLIAEF++DNSNFGPF FD  TV  MY
Sbjct: 61  VLRVNSPTIDLSSISVRKFSISNTNSSSSSLNLTLIAEFSLDNSNFGPFIFDYVTVVFMY 120

Query: 121 GSAIIGERSTGAGRAEAKGSMRMNVTVEASAKNISGDSNNLGILNLSSFAKLRGRVRLIH 180
           G  I+GERSTG GRAEAKG+ RMNV+VEAS +N+S D N  GILN+SSFAK  GR+ LIH
Sbjct: 121 GGVIVGERSTGGGRAEAKGTTRMNVSVEASVENVSSDLNGSGILNMSSFAKFGGRIHLIH 180

Query: 181 IFRRRISSEVSCSMNLDLNTHQIQHNWVCE 211
           + R+RI SE+SCS+NLDLNTHQIQ  WVC+
Sbjct: 181 VLRKRIWSEISCSINLDLNTHQIQPRWVCD 199

BLAST of CmUC01G002360 vs. TAIR 10
Match: AT1G64065.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 82.4 bits (202), Expect = 4.7e-16
Identity = 68/216 (31.48%), Postives = 116/216 (53.70%), Query Frame = 0

Query: 4   DSQSFPLAHYQAHHKSDQEQQ-LATFKTLRKERSNKCFIYIFSAFVFLSVAVLIFALIVL 63
           D     LA  + + +SD+EQ     ++   +E   KC +Y  +  V +    LI + I L
Sbjct: 3   DEDRITLAPTEIYGRSDEEQSGPRIWRRKTEEPPGKCLVYSLTIIVIIFALCLILSSIFL 62

Query: 64  RLNSPSIRLSSVSIPKFSITNANSSSPSLNLTLIAEFTVDNSNFGPFDFDNGTVGLMYGS 123
           R++ P I   S+S      +  NS++P  N TL+++ ++ NSNFG F+F++ T+ ++Y  
Sbjct: 63  RISKPEIETRSISTRDLR-SGGNSTNPYFNATLVSDISIRNSNFGAFEFEDSTLRVVYAD 122

Query: 124 -AIIGERSTGAGRAEAKGSMRM-NVTVEASA------KNISGDSNNLGILNLSSFAKLRG 183
             ++GE      R EA  ++R+  V VE  +      K++  D   LG L L S A++RG
Sbjct: 123 HGVVGETKIEGRRVEAHKTVRITGVVVEIGSFRLLDTKDLDKDL-RLGFLELRSVAEVRG 182

Query: 184 RVRLIHIFRRRISSEVSCSMNLDLNTHQIQHNWVCE 211
           R++++   R ++ S +SC+M L+L    IQ N +CE
Sbjct: 183 RIKVLGRKRWKV-SVMSCTMRLNLTGRFIQ-NLLCE 214

BLAST of CmUC01G002360 vs. TAIR 10
Match: AT3G54200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 65.5 bits (158), Expect = 6.0e-11
Identity = 46/190 (24.21%), Postives = 97/190 (51.05%), Query Frame = 0

Query: 21  QEQQLATFKTLRKERSNK-CFIYIFSAFVFLSVAVLIFALIVLRLNSPSIRLSSVSIPKF 80
           Q     T K LR++R+ K C  +     + +++ ++I A  + +   P+  + SV++ + 
Sbjct: 35  QSANTGTAKKLRRKRNCKICICFTILLILLIAIVIVILAFTLFKPKRPTTTIDSVTVDRL 94

Query: 81  SIT-NANSSSPSLNLTLIAEFTVDNSNFGPFDFDNGTVGLMYGSAIIGERSTGAGRAEAK 140
             + N       LNLTL  + ++ N N   F +D+ +  L Y   +IGE    A R  A+
Sbjct: 95  QASVNPLLLKVLLNLTLNVDLSLKNPNRIGFSYDSSSALLNYRGQVIGEAPLPANRIAAR 154

Query: 141 GSMRMNVTVEASAKNISGDSNNL-----GILNLSSFAKLRGRVRLIHIFRRRISSEVSCS 200
            ++ +N+T+   A  +  ++  L     G++ L++F K+ G+V ++ IF+ ++ S  SC 
Sbjct: 155 KTVPLNITLTLMADRLLSETQLLSDVMAGVIPLNTFVKVTGKVTVLKIFKIKVQSSSSCD 214

Query: 201 MNLDLNTHQI 204
           +++ ++   +
Sbjct: 215 LSISVSDRNV 224

BLAST of CmUC01G002360 vs. TAIR 10
Match: AT4G23610.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 55.5 bits (132), Expect = 6.2e-08
Identity = 58/213 (27.23%), Postives = 101/213 (47.42%), Query Frame = 0

Query: 2   VEDSQSFPLAHYQAHHKSDQ---EQQLATFKTLRKERSNK---CFIYIFSAFVFLSVAVL 61
           + + Q+ PLA      +SDQ   E Q    +T       K   C  +I S  + ++V  +
Sbjct: 8   INEDQAKPLAPLFLTTRSDQPDEEDQYHHDRTKYVHSQTKLILCCGFIASLTMLIAVTFI 67

Query: 62  IFALIVLRLNSPSIRLSSVSI-PKFSITNANSSSPSLNLTLIAEFTVDNSNFGPFDFDNG 121
           + +L V  L+SP++ + S+S   +F   N   ++ + N T+  E ++ N N   F   N 
Sbjct: 68  VLSLTVFHLHSPNLTVDSISFNQRFDFVNGKVNT-NQNTTVSVEISLHNPNPALFIVKNV 127

Query: 122 TVGLMYGS-AIIGERSTGAGRAEAKGSMRMNVTVE-------ASAKNISGDSNNLGILNL 181
            V   +G   ++GE    +    AK +++MN+T E       AS   +  D N  G+ +L
Sbjct: 128 NVSFYHGELVVVGESIRRSETIPAKRTVKMNLTAEIVKTKLLASLPGLMEDLNGRGV-DL 187

Query: 182 SSFAKLRGRVRLIHIFRRRISSEVSCSMNLDLN 200
            S  ++RGRV+ + IFR+ +  +  C M +  N
Sbjct: 188 KSSVEVRGRVKKMKIFRKTVHLQTDCFMKMTTN 218

BLAST of CmUC01G002360 vs. TAIR 10
Match: AT4G23930.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 48.1 bits (113), Expect = 9.8e-06
Identity = 48/176 (27.27%), Postives = 75/176 (42.61%), Query Frame = 0

Query: 31  LRKERSNKCFIYIFSAF-VFLSVAVLIFALIVLRLNSPSIRLSSVSIPKFSITNANSSSP 90
           + K  SN     + + F VFL +A L   L V R   P I ++SV +P FS+ N+     
Sbjct: 1   MSKSCSNLASCAVATLFIVFLIIAALTVYLTVFRPRDPEISVTSVKVPSFSVANS----- 60

Query: 91  SLNLTLIAEFTVDNSNFGPFDFDNGTVGLMYGSAIIGERSTGAGRAEAKGSMRMNVTV-- 150
           S++ T      V N N   F   N  + L Y    IG     AG  E+  + RM  T   
Sbjct: 61  SVSFTFSQFSAVRNPNRAAFSHYNNVIQLFYYGNRIGYTFVPAGEIESGRTKRMLATFSV 120

Query: 151 -----------EASAKNISGDSNNLGILNLSSFAKLRGRVRLIHIFRRRISSEVSC 193
                      + SA        +   + + S  ++ GRVR++ +F  RI+++ +C
Sbjct: 121 QSFPLAAASSSQISAAQFQNSDRSGSTVEIESKLEMAGRVRVLGLFTHRIAAKCNC 171

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038875090.12.7e-9890.48late embryogenesis abundant protein At1g64065 [Benincasa hispida][more]
XP_008437349.11.2e-8582.55PREDICTED: late embryogenesis abundant protein At1g64065 [Cucumis melo][more]
KAA0042716.15.8e-8582.08late embryogenesis abundant protein [Cucumis melo var. makuwa][more]
XP_004143966.14.2e-8381.13late embryogenesis abundant protein At1g64065 [Cucumis sativus][more]
KAE8647845.13.9e-8180.19hypothetical protein Csa_000600 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Q6DST16.6e-1531.48Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana OX=3702 GN... [more]
Match NameE-valueIdentityDescription
A0A1S3ATY35.7e-8682.55late embryogenesis abundant protein At1g64065 OS=Cucumis melo OX=3656 GN=LOC1034... [more]
A0A5A7TL682.8e-8582.08Late embryogenesis abundant protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A0A0KQT72.0e-8381.13LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152160 PE=4 ... [more]
A0A6J1I3M24.0e-7974.06uncharacterized protein LOC111468875 OS=Cucurbita maxima OX=3661 GN=LOC111468875... [more]
A0A6J1H2C02.3e-6667.62uncharacterized protein LOC111459739 OS=Cucurbita moschata OX=3662 GN=LOC1114597... [more]
Match NameE-valueIdentityDescription
AT1G64065.14.7e-1631.48Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT3G54200.16.0e-1124.21Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT4G23610.16.2e-0827.23Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT4G23930.19.8e-0627.27Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA_2 subgroupPFAMPF03168LEA_2coord: 99..192
e-value: 2.1E-8
score: 34.6
NoneNo IPR availablePANTHERPTHR31852:SF192LATE EMBRYOGENESIS ABUNDANT PROTEINcoord: 7..210
NoneNo IPR availablePANTHERPTHR31852LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 7..210

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC01G002360.1CmUC01G002360.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane