Clc11G20490 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc11G20490
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	SWI/SNF complex subunit SWI3B
Location	ClcChr11: 30712915 .. 30718210 (+)
RNA-Seq Expression	Clc11G20490
Synteny	Clc11G20490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAAAGTGTAGGAAGTTAGCCAAAAATAATAGCGGGAGTGTGTAGGACCTAATGGAAGTCTTCGAGTGGGACGACTTGAAGGAAGCAAAGCCCAGCCCAGTTCCATATATTGGGCTCCTTCTGGCGTCTGCTGCTCCGTTTTATCGCTTCTCGCCTCGCCTGAGCTTACCGACGGTTAATTTTGTTATTCCGATCGGGTCCCCGGAGCTTCCTTTCTCTATTTCCTTTTCTCTGCTTCGGACAGCTTGTTAGTTGTTACATCCATGGCGGCTAATTCACCGGTCCAAGATCCTTCCACCATGGATGCTTCTGCTAAACAACCTGCGCCTTCGCCCTCTCCCTCCCCTGCTCTTGTGACCCCTCCCCTTAAAATCGAGACTCCTCCCTCCGACTCCGGTCAGACCCCCTCCGTCGTCCCCACTCCCACCCCTCGCCCCGAGGAACTCCCGCAATCCACCTCTCCCGATCCAATTCATCTTCCCAGCTACTCCAGTAAGTATTCCTTCTTCCTGCATTTACTGCAACCCCGCAGCTACTTGTTTTTAGATGCTAACTCTTCGTTATGTTATTTTTTCTCGCCCAGGATGGTTCTCCTGGAACGGCATTCACGAATGCGAGGTTCGGTTCCTTCCGGAGTTCTTTGATTCACGGTCGCCCTCTAAAAACCCTAGGGTTTACAAGTACCTTCGCAATTCTATTGTCAAGAATTTCAGAGAATGTCCTTCCAAGAAGATCACCTTTACTGATATCCGAAAGACGCTTGTTGCCGACGTAGGATCCATTCGTAGGGTTTTCGATTTCCTCGAGGCGTGGGGTCTTATCAATTACTCGCCGTCCGCGCTGAGCAAACCGCTCAAGTGGGAGGACCGGGACTCCAAGTCTAATGCGTCCGCTTCGCACACCGGTGAACCTGGAGGTAGTTCTGCGGATTCCTCGGCTTCTAAAGACTCTTCTAAGAGAGTATGCAGCGGTTGCAAGTCTATCTGTAGCATTGCTTGCTTTGCTTGCGATAAGGTTCGTATCTACTTGCGTCGTGAACGTATTAAAGTTTCCTCTATCTGTTTTCTTGTTTCCGCGAATTAGTTTTTTGTTTCGTTTCTTCCTCAGCGTGTTCTAACTTCTCAATATTATCGAGTCTTCAATTCGACTGTTTTGTATATATTAAAGATTTTTTGGAGTTAGCGGATCGGTAATTGGCATAATGTTTCTCTTTGGAAGTGGGAGATAGTGAAAGGTTTTATCTCCTATCTAGCCGTTGTTGTACTAAGAAAGGAAAAAATTATATAGGGTCCGAGGCAGCTGGATTGGTTTATTTGTTTAATTAGTCTTCAATGTCAATTATTTACTATTTTCATTCCCGTCGTTGTATTATAGAAAGCGATGTAGGTAAAGATTTTTCTGGTCTTTAATCGGTCAAAAGCCCTCAGACTCGGGTTTTAATCTGTTCATTTTGTTAATCTTCCTGCTTAAATTTCGTGAGGCCGTCTGCTGACATATTGTGGTTTTAGTGGATAGATCCCTAACTGAATTTGGTGACTTGATGAATTTGGAACTTGGATAGACTAGTACTTTTGAATTGATATAATTTCATATATTAGAACTAATATAATGGTCACCATTTCGTACAGTTTGATTTGACACTTTGTGCAAGGTGCTATGTTCGTGGAAACTATCGAGTTGGTGTTGTTTCTTCAGATTTTCGACGTGTTGAGATCAATGATGATACACGGACAGATTGGACTGATAAGGAGACTTTGCATCTTCTTGAAGCTTTGATGCATTATGGTGATGACTGGAAAAAGGTTGCACAACATGTTGGTGGCAGAACTGAGAGGGAATGTGTCGCCCATTTTGTGAAGCTTCCTTTAGGGGAGCAGTTTCATGGTTATCCAGATTCTGGAAATATCGACACATATACTGTGGCGAAGGATCATGCTAGTGCCAATCTTGCATTGGAAAGTGCTGGCACATCTCTTCCTAGTAAAAGAATCCGTCTATCACCACTGGCAGATGCAAGTAATCCCATAATGGCTCAGGTTAGTGTTGGTTTTAGTCCTTTCCTTTAGCTTGCATTGGCTGCTTACCTGTTAATAATTCAACCAACACCTTGTATTGTGTTGTGGAAGTGTCCTATTCACGGAAGCGTGTATTAGAGGTCTGATTTGCATACGAGTGGTGGAAAAGGTGAAACAATTGTCTATCAATTTGATGCCTTCTATTGGATTTCTTTTTCTTTTTATAGGGGTTTTTAACATTTTGTGGGCTGGGTTGGGTTATTAATCAATGAGAGATTAAAAAAGGCTTATCCATTTAATTGCAAGTAAAAGAGATGCTCTTTTAATAAAATGAATTTGGCTCCTCCCAAAGGAAAGGAAGAATGAATTTGGGTTAGTTTGTCTTGACTTGAACTAATTTCCTTAAAAAAATAAAATAAAATAAAATAAAATAAAATTACTCAAGTCATAGTTTGAATCATGAACCAACGTGGACAAACCCATAATCCAAGTTAACAAGTTAACCCAACTACAGGTTTCTTGGACTTTTATTAGCATACTATTCTTCTGCATTACATATATAGCTATCCTCTGCAGTAATTTTCCAAGAATATCTATCGCAACTGAAACTGGTAGTGGACCTGTTGGTCGTTTGGAACTGTCTGGTTTTCATTCACGATATAATCACGTGATTCATATTTATGCTCTCAGGCTGCCTTTTTGTCATCGTTGGTGGGTGTTGAGGTTGCAAAAGCAGCTGCCCATGCTGCTGTGATTAAACTTTCTGATATGGACTCTGGAGGAGACGAGGAAATTGGCAGGGCTATCGCTAGGGATATAGGAGAGCAAGGTATTAGCTTTGTTTCTGTTGAAAGGTTTTCTTTTCTTTTTCTTTTTTTGTTGGGGGGGGGGGGGGGGGGGGGGGAGGTTATTGATGTTTGAATTGTGTGTATTTTGTTTGCATCGATCATCTAATAGAGAAAAAAAAATTGTGCATCTTCTTTTTCTTTTTCTCTGACTGCTTTTATTTTTATAGATTATAAGTTATACCTATTGTGTCGCAAAGGAAAAAAATAGGGTCAAGTTGATGTAAACTCTATAAGTGACTAACTTAAGGCCTCCTTGATAATCATTTTGTTTTGTTTTCATTCTTCAGCACGTGTACTACCTATTTCTTTGTTCTGTAATTTGTATTATAATTTGAGTCCAACAAATATGGGGATCAGAAAGCGAACTTTGAACTTCAAGTGAAACATTTAGTGTTTTAATTGCTTATCTATATTCATGTTAGAAATTTGTAATATACTTAGTGAATATGTCTTGAAATTTTGGTAAGATCTCAATAGTTTTCTTCCTTCTTTTACTAATTACACCCAGTATACCAAAACTAACCCAGAAAAAGAAAACTAGAATCCACTCAGTTTAAGTTGGTTAGAAAGGGAAATAATTGCAAAAAGATTTTCAAAGGGAACACCTAGAAGGGATTTAAGTTTTAGTCGAACAAAACATCAACTCAAGTCTGTCTTTCAATTCAATAACTTTATCTTGCTAACTACACTCCCTAAGTAATAAGCTTTAACAACTCAAGTCTATCTTTCATTTAAAAGTTCTATGGTTTCCTCCTAAGCGTGCTCCTTGAGTAATAGCTTTAACCGCATCACATACAAGCATCTTTGTCTACCCTTTAAACATCGGCCCACGTCATAATAGTTGTTTGAGATTCCTCTTTACCTTGCCATCTCAACATATCAGCTATATAAAAAGTTAAAATCATACCAACAATTCTGACAACATGGCACTGAAAGAAAAGATGTAGCTTCTGCCACCATATCCTTGGTATTGGTCCCCGACCTACTTCTTCATGAAGTGATTTTGCACGCTCCAATGCTAACTCTACGAGACTTTTAGGTTCTAATTATTAAAGTCTGTATGATAACCATTTGATTTTTTATTTTTAGTTTTTGAAAATTAAGTTTATAAATACTCCTTCCACCTCTAAATTTCTCGCTTTGTTAAATATTTTTTACCAATACTTTAAAAAACCAAGTCAAATTTTGAAAACTAAAAAGGTAGGTTTTAAGTACTTGTTTTTAATTTTTGGAATTTGGCTAAGATTTCAGCTTTTATATTTAAGAAAGATTCGAGTCATTGCAAAAAATTGAGAGGAAATAGGCTGAATTTTTAAAAACCAAATGATTACCAAAAGGGCCTAAGCTTTTCACCTAGAGGCCAAAACTTTGGAGAATCTTTTCCCATTTGATTTGTATATTGCCGGCCTATGTGTGGGTTTAAAAATACTTGGAACATCTTATTTGCAATTTTTTAGTCCTTCCCATGTTAATCACCAGATGAAGAATTTAATTTTTCCCCATTCCCTTTCAAAATAATTTTAGTTTCTTTAGGAGCAGATGCAGAGAAATGAATATACATAATTTTAAGTCTTTACAATAGCTAGCAGTTTTGATCTATCCCGTATCTGCTAGATACGACTATGCTATAGTTTTTCCTCCCTAATGGCGAATGTTCAAACTCATTTTGCCGGTGAAAGCCTATTTTCTTTATCTTGGGCTCCCAATACATGGGTCTTCCTTATCCCTTCCCGCAGAAATCTCTTCAATTTTCCTTATAATTATTGGTACAACTTTACTTTGCAGTGTTGAAGTTTTCAGAAATTCATTGTTAGATTGCCTCTCAAAGAGACGCTGGAATAGGGAAATCTTTATACGAAACTCAATTTCAACTCTGTTCTAATATATATACTGGTTTTTGAGAGTTTGATCCTGCTGCTAATGTGCAGGATATTTGTTAACTGTTAATGAGGTAGGTTGGACTTATCATAACTCTTGTGGTTCTGATTCAGGAAACGATGTTGCATCCTGTGGAGGCAGCTCATTTAGGGGGTCTTCGATGGAAGTGGAGAAAGCAATATCTCATATATTAGACGTCCAGGTAAGGCTTTTTTTTTTCTTTTTTCTTTTTTTTTTTTTGGTATTCTCTGGTATAGTTGTAAGTCGAGAAGTTTGCGTTATTTGCTAATATTGGAACATATTGCCAATAGATGAAAGAGATTGTAGATAAGCTTGTTCGTTTCGAGGAGGTAGACTTGCAGATGGAGAAGGAATTTAAGCAATTAGAGCAAATGAAAAGCATGCTTTTTGTTGATCAACTAAATCTCTTATTCAATAAAGATTGTATCCCTACCGTCGAAGACAAGAACAGTATGAATGTAAGAACGTGTTGATTATTAATCTCCCCCCTTATTTAAGAAATTTCAATCACAATTGTATATCAGCGCATGCCT

mRNA sequence

ATTAAAGTGTAGGAAGTTAGCCAAAAATAATAGCGGGAGTGTGTAGGACCTAATGGAAGTCTTCGAGTGGGACGACTTGAAGGAAGCAAAGCCCAGCCCAGTTCCATATATTGGGCTCCTTCTGGCGTCTGCTGCTCCGTTTTATCGCTTCTCGCCTCGCCTGAGCTTACCGACGGTTAATTTTGTTATTCCGATCGGGTCCCCGGAGCTTCCTTTCTCTATTTCCTTTTCTCTGCTTCGGACAGCTTGTTAGTTGTTACATCCATGGCGGCTAATTCACCGGTCCAAGATCCTTCCACCATGGATGCTTCTGCTAAACAACCTGCGCCTTCGCCCTCTCCCTCCCCTGCTCTTGTGACCCCTCCCCTTAAAATCGAGACTCCTCCCTCCGACTCCGGTCAGACCCCCTCCGTCGTCCCCACTCCCACCCCTCGCCCCGAGGAACTCCCGCAATCCACCTCTCCCGATCCAATTCATCTTCCCAGCTACTCCAGATGGTTCTCCTGGAACGGCATTCACGAATGCGAGGTTCGGTTCCTTCCGGAGTTCTTTGATTCACGGTCGCCCTCTAAAAACCCTAGGGTTTACAAGTACCTTCGCAATTCTATTGTCAAGAATTTCAGAGAATGTCCTTCCAAGAAGATCACCTTTACTGATATCCGAAAGACGCTTGTTGCCGACGTAGGATCCATTCGTAGGGTTTTCGATTTCCTCGAGGCGTGGGGTCTTATCAATTACTCGCCGTCCGCGCTGAGCAAACCGCTCAAGTGGGAGGACCGGGACTCCAAGTCTAATGCGTCCGCTTCGCACACCGGTGAACCTGGAGGTAGTTCTGCGGATTCCTCGGCTTCTAAAGACTCTTCTAAGAGAGTATGCAGCGGTTGCAAGTCTATCTGTAGCATTGCTTGCTTTGCTTGCGATAAGTTTGATTTGACACTTTGTGCAAGGTGCTATGTTCGTGGAAACTATCGAGTTGGTGTTGTTTCTTCAGATTTTCGACGTGTTGAGATCAATGATGATACACGGACAGATTGGACTGATAAGGAGACTTTGCATCTTCTTGAAGCTTTGATGCATTATGGTGATGACTGGAAAAAGGTTGCACAACATGTTGGTGGCAGAACTGAGAGGGAATGTGTCGCCCATTTTGTGAAGCTTCCTTTAGGGGAGCAGTTTCATGGTTATCCAGATTCTGGAAATATCGACACATATACTGTGGCGAAGGATCATGCTAGTGCCAATCTTGCATTGGAAAGTGCTGGCACATCTCTTCCTAGTAAAAGAATCCGTCTATCACCACTGGCAGATGCAAGTAATCCCATAATGGCTCAGGCTGCCTTTTTGTCATCGTTGGTGGGTGTTGAGGTTGCAAAAGCAGCTGCCCATGCTGCTGTGATTAAACTTTCTGATATGGACTCTGGAGGAGACGAGGAAATTGGCAGGGCTATCGCTAGGGATATAGGAGAGCAAGGATATTTGTTAACTGTTAATGAGGTAGGTTGGACTTATCATAACTCTTGTGGTTCTGATTCAGGAAACGATGTTGCATCCTGTGGAGGCAGCTCATTTAGGGGGTCTTCGATGGAAGTGGAGAAAGCAATATCTCATATATTAGACGTCCAGATGAAAGAGATTGTAGATAAGCTTGTTCGTTTCGAGGAGGTAGACTTGCAGATGGAGAAGGAATTTAAGCAATTAGAGCAAATGAAAAGCATGCTTTTTGTTGATCAACTAAATCTCTTATTCAATAAAGATTGTATCCCTACCGTCGAAGACAAGAACAGTATGAATGTAAGAACGTGTTGATTATTAATCTCCCCCCTTATTTAAGAAATTTCAATCACAATTGTATATCAGCGCATGCCT

Coding sequence (CDS)

ATGGCGGCTAATTCACCGGTCCAAGATCCTTCCACCATGGATGCTTCTGCTAAACAACCTGCGCCTTCGCCCTCTCCCTCCCCTGCTCTTGTGACCCCTCCCCTTAAAATCGAGACTCCTCCCTCCGACTCCGGTCAGACCCCCTCCGTCGTCCCCACTCCCACCCCTCGCCCCGAGGAACTCCCGCAATCCACCTCTCCCGATCCAATTCATCTTCCCAGCTACTCCAGATGGTTCTCCTGGAACGGCATTCACGAATGCGAGGTTCGGTTCCTTCCGGAGTTCTTTGATTCACGGTCGCCCTCTAAAAACCCTAGGGTTTACAAGTACCTTCGCAATTCTATTGTCAAGAATTTCAGAGAATGTCCTTCCAAGAAGATCACCTTTACTGATATCCGAAAGACGCTTGTTGCCGACGTAGGATCCATTCGTAGGGTTTTCGATTTCCTCGAGGCGTGGGGTCTTATCAATTACTCGCCGTCCGCGCTGAGCAAACCGCTCAAGTGGGAGGACCGGGACTCCAAGTCTAATGCGTCCGCTTCGCACACCGGTGAACCTGGAGGTAGTTCTGCGGATTCCTCGGCTTCTAAAGACTCTTCTAAGAGAGTATGCAGCGGTTGCAAGTCTATCTGTAGCATTGCTTGCTTTGCTTGCGATAAGTTTGATTTGACACTTTGTGCAAGGTGCTATGTTCGTGGAAACTATCGAGTTGGTGTTGTTTCTTCAGATTTTCGACGTGTTGAGATCAATGATGATACACGGACAGATTGGACTGATAAGGAGACTTTGCATCTTCTTGAAGCTTTGATGCATTATGGTGATGACTGGAAAAAGGTTGCACAACATGTTGGTGGCAGAACTGAGAGGGAATGTGTCGCCCATTTTGTGAAGCTTCCTTTAGGGGAGCAGTTTCATGGTTATCCAGATTCTGGAAATATCGACACATATACTGTGGCGAAGGATCATGCTAGTGCCAATCTTGCATTGGAAAGTGCTGGCACATCTCTTCCTAGTAAAAGAATCCGTCTATCACCACTGGCAGATGCAAGTAATCCCATAATGGCTCAGGCTGCCTTTTTGTCATCGTTGGTGGGTGTTGAGGTTGCAAAAGCAGCTGCCCATGCTGCTGTGATTAAACTTTCTGATATGGACTCTGGAGGAGACGAGGAAATTGGCAGGGCTATCGCTAGGGATATAGGAGAGCAAGGATATTTGTTAACTGTTAATGAGGTAGGTTGGACTTATCATAACTCTTGTGGTTCTGATTCAGGAAACGATGTTGCATCCTGTGGAGGCAGCTCATTTAGGGGGTCTTCGATGGAAGTGGAGAAAGCAATATCTCATATATTAGACGTCCAGATGAAAGAGATTGTAGATAAGCTTGTTCGTTTCGAGGAGGTAGACTTGCAGATGGAGAAGGAATTTAAGCAATTAGAGCAAATGAAAAGCATGCTTTTTGTTGATCAACTAAATCTCTTATTCAATAAAGATTGTATCCCTACCGTCGAAGACAAGAACAGTATGAATGTAAGAACGTGTTGA

Protein sequence

MAANSPVQDPSTMDASAKQPAPSPSPSPALVTPPLKIETPPSDSGQTPSVVPTPTPRPEELPQSTSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECPSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWEDRDSKSNASASHTGEPGGSSADSSASKDSSKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVVSSDFRRVEINDDTRTDWTDKETLHLLEALMHYGDDWKKVAQHVGGRTERECVAHFVKLPLGEQFHGYPDSGNIDTYTVAKDHASANLALESAGTSLPSKRIRLSPLADASNPIMAQAAFLSSLVGVEVAKAAAHAAVIKLSDMDSGGDEEIGRAIARDIGEQGYLLTVNEVGWTYHNSCGSDSGNDVASCGGSSFRGSSMEVEKAISHILDVQMKEIVDKLVRFEEVDLQMEKEFKQLEQMKSMLFVDQLNLLFNKDCIPTVEDKNSMNVRTC

Homology

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BLAST of Clc11G20490 vs. NCBI nr
Match: XP_008453025.2 (PREDICTED: SWI/SNF complex subunit SWI3B [Cucumis melo])

HSP 1 Score: 823.5 bits (2126), Expect = 9.8e-235
Identity = 437/514 (85.02%), Postives = 457/514 (88.91%), Query Frame = 0


Query: 1   MAANSPVQDPSTMDASAKQPAPSPSPSPALVTPPLKIETPPSDSGQTPSVVPTPTPRPEE 60
           MAANSPVQDP T DASAKQ A  PSPSPALVTPPLKIETPPSDSGQTPS VP PTPRP++
Sbjct: 1   MAANSPVQDPPT-DASAKQSA--PSPSPALVTPPLKIETPPSDSGQTPSAVPAPTPRPDD 60

Query: 61  LPQSTSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFR 120
           LPQ TSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFR
Sbjct: 61  LPQPTSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFR 120

Query: 121 ECPSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWEDRDSKSNASA 180
           ECPSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWEDRDSKSNASA
Sbjct: 121 ECPSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWEDRDSKSNASA 180

Query: 181 SHTGEPGGSSADSSASKDSSKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVV 240
           S+TGEPGG SA+SSA KD+SKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVV
Sbjct: 181 SNTGEPGGGSANSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVV 240

Query: 241 -SSDFRRVEINDDTRTDWTDKETLHLLEALMHYGDDWKKVAQHVGGRTERECVAHFVKLP 300
            SSDFRRVEINDDTRTDWTDKETLHLLEAL HYGDDWKKVAQHVGGRTERECVAHFVKLP
Sbjct: 241 SSSDFRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTERECVAHFVKLP 300

Query: 301 LGEQFHGYPDSGNID-TYTVAKDHASANLALESAGTSLPSKRIRLSPLADASNPIMAQAA 360
           LGEQFHGYPDS +ID  YTV KDHASANL LES G S+P+KRIRLSPLADASNPIMAQAA
Sbjct: 301 LGEQFHGYPDSEHIDNNYTVVKDHASANLTLESTGASIPNKRIRLSPLADASNPIMAQAA 360

Query: 361 FLSSLVGVEVAKAAAHAAVIKLSDMDSGGDEEIGRAIARDIGEQGYLLTVNEVGWTYHNS 420
           FLSSLVG+EVA+AAA AAVIKLS+MD G D EI R IAR+  EQ                
Sbjct: 361 FLSSLVGIEVAEAAAQAAVIKLSEMDFGRDGEIARPIARNTEEQ---------------- 420

Query: 421 CGSDSGNDVASCGGSSFRGSSMEVEKAISHILDVQMKEIVDKLVRFEEVDLQMEKEFKQL 480
                GNDVASC GS  RGSSM++EKAISHI+DVQMKE VDKL  FEE +LQMEK FKQL
Sbjct: 421 -----GNDVASCEGSLLRGSSMDMEKAISHIVDVQMKEFVDKLNGFEEGELQMEKVFKQL 480

Query: 481 EQMKSMLFVDQLNLLFNKDCIPTVEDKNSMNVRT 513
           +QMKSMLFVDQLNLLFNK C+PTVEDK++MNVRT
Sbjct: 481 DQMKSMLFVDQLNLLFNKGCVPTVEDKSNMNVRT 490

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BLAST of Clc11G20490 vs. NCBI nr
Match: XP_004145606.2 (SWI/SNF complex subunit SWI3B [Cucumis sativus] >KGN55544.1 hypothetical protein Csa_011944 [Cucumis sativus])

HSP 1 Score: 803.9 bits (2075), Expect = 8.0e-229
Identity = 432/517 (83.56%), Postives = 455/517 (88.01%), Query Frame = 0


Query: 1   MAANSPVQDPSTMDASAKQPAPSPSPSPALVTPPLKIETPPSDSGQTPSVVPTPTPRPEE 60
           MAANSPVQDP T DASAKQ A  PSPSPALVTPPLKIETPPSDSGQTPS VP PTPRPE+
Sbjct: 63  MAANSPVQDPPT-DASAKQSA--PSPSPALVTPPLKIETPPSDSGQTPSAVPAPTPRPED 122

Query: 61  LPQSTSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFR 120
           LPQSTSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFR
Sbjct: 123 LPQSTSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFR 182

Query: 121 ECPSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWEDRDSKSNASA 180
           ECPSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKW+DRDSKSNASA
Sbjct: 183 ECPSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWDDRDSKSNASA 242

Query: 181 SHTGEPGGSSADSSASKDSSKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVV 240
           S+TGEPGG SA+SSA KD+SKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGV 
Sbjct: 243 SNTGEPGGGSANSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVS 302

Query: 241 SSDFRRVEINDDTRTDWTDKETLHLLEALMHYGDDWKKVAQHVGGRTERECVAHFVKLPL 300
           SSDFRRVEINDDTRTDWTDKETLHLLEAL HYGDDWKKVAQHVGGRTERECVA FVKLPL
Sbjct: 303 SSDFRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTERECVAQFVKLPL 362

Query: 301 GEQFHGYPDSGNIDTYTVAKDHASANLALESA---GTSLPSKRIRLSPLADASNPIMAQA 360
           GEQFHGYPDS +ID     KD ASANL LES    GTS+P+KRIRLSPLADASNPIMAQA
Sbjct: 363 GEQFHGYPDSEHIDNNCTVKDEASANLTLESTGKIGTSIPNKRIRLSPLADASNPIMAQA 422

Query: 361 AFLSSLVGVEVAKAAAHAAVIKLSDMDSGGDEEIGRAIARDIGEQGYLLTVNEVGWTYHN 420
           AFLSSLVGVEVA+AAA AAVIKLS+MD GGD EI   +AR+IGEQ               
Sbjct: 423 AFLSSLVGVEVAEAAAQAAVIKLSEMDFGGDGEIAIPVARNIGEQ--------------- 482

Query: 421 SCGSDSGNDVASCGGSSF-RGSSMEVEKAISHILDVQMKEIVDKLVRFEEVDLQMEKEFK 480
                 GND AS GGS   RGS+M++EKAISHI++VQMKEIVDKL  FEE +LQMEK FK
Sbjct: 483 ------GNDAASHGGSCLSRGSTMDMEKAISHIVNVQMKEIVDKLNGFEEGELQMEKVFK 542

Query: 481 QLEQMKSMLFVDQLNLLFNKDCI-PTVEDKNSMNVRT 513
           QL+QMKSMLFVDQLNLLFNK+CI  TVE+K++MNVRT
Sbjct: 543 QLDQMKSMLFVDQLNLLFNKECISTTVEEKSNMNVRT 555

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BLAST of Clc11G20490 vs. NCBI nr
Match: XP_038899020.1 (LOW QUALITY PROTEIN: SWI/SNF complex subunit SWI3B [Benincasa hispida])

HSP 1 Score: 802.0 bits (2070), Expect = 3.1e-228
Identity = 430/514 (83.66%), Postives = 445/514 (86.58%), Query Frame = 0


Query: 1   MAANSPVQDPSTMDASAKQPAPSPSPSPALVTPPLKIETPPSDSGQTPSVVPTPTPRPEE 60
           MAANSPVQDPS  D SAKQ A  PSPSPALVTPPLKIET            P  TPRPE+
Sbjct: 72  MAANSPVQDPSP-DTSAKQSA--PSPSPALVTPPLKIET------------PXXTPRPED 131

Query: 61  LPQSTSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFR 120
           LPQSTSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFR
Sbjct: 132 LPQSTSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFR 191

Query: 121 ECPSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWEDRDSKSNASA 180
            CPSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWEDRDSKSNASA
Sbjct: 192 VCPSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWEDRDSKSNASA 251

Query: 181 SHTGEPGGSSADSSASKDSSKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVV 240
           SHTGEPGGSSADSSA KD+SKRVCSGCKSIC+IACFACDKFDLTLCARCYVRGNYRVGV+
Sbjct: 252 SHTGEPGGSSADSSAPKDASKRVCSGCKSICTIACFACDKFDLTLCARCYVRGNYRVGVI 311

Query: 241 SSDFRRVEINDDTRTDWTDKETLHLLEALMHYGDDWKKVAQHVGGRTERECVAHFVKLPL 300
           SSDFRRVEINDDTRTDWTDKETLHLLEAL HYGDDWKKVAQHVGGRTERECVAHFVKLPL
Sbjct: 312 SSDFRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTERECVAHFVKLPL 371

Query: 301 GEQFHGYPDSGNI-DTYTVAKDHASANLALESAGTSLPSKRIRLSPLADASNPIMAQAAF 360
           GEQFHGYPDSG++ + YT  KDHASA L LE  GTSLP+KRIRLSPLADASNPIMAQAAF
Sbjct: 372 GEQFHGYPDSGHMGNMYTEVKDHASAGLTLERTGTSLPNKRIRLSPLADASNPIMAQAAF 431

Query: 361 LSSLVGVEVAKAAAHAAVIKLSDMDSGGDEEIGRAIARDIGEQGYLLTVNEVGWTYHNSC 420
           LSSLVGVEVA+AAAHAAV KLSD+D GGD EI   IAR+I                    
Sbjct: 432 LSSLVGVEVAEAAAHAAVSKLSDLDFGGDGEIATTIARNI-------------------- 491

Query: 421 GSDSGNDVASCGGSSFRGSSMEVEKAISHILDVQMKEIVDKLVRFEEVDLQMEKEFKQLE 480
             + GND A  G  SFR SSM+VEKAISHILDVQMKEIVDKLVRFEEVDLQMEKEFKQL+
Sbjct: 492 --EQGNDAAPRGRRSFRESSMDVEKAISHILDVQMKEIVDKLVRFEEVDLQMEKEFKQLD 547

Query: 481 QMKSMLFVDQLNLLFNKDCIPTVEDKNSMNVRTC 514
           QMK+MLFVDQLN LFNK CIPTVED NSMNVRTC
Sbjct: 552 QMKNMLFVDQLNYLFNKGCIPTVED-NSMNVRTC 547

[Close]

BLAST of Clc11G20490 vs. NCBI nr
Match: KAG6591190.1 (SWI/SNF complex subunit SWI3B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 799.3 bits (2063), Expect = 2.0e-227
Identity = 423/527 (80.27%), Postives = 451/527 (85.58%), Query Frame = 0


Query: 1   MAANSPVQDPSTMDASAKQPAPSPSPSPALVTPPLKIETPPSDSGQTPSVVPTPTPRPEE 60
           MAAN PVQDP T DASAKQ  P+PSPSP LVTPP+KI+TP SDSG+TP+ VP PTPRPE+
Sbjct: 1   MAANLPVQDPPT-DASAKQ--PTPSPSPTLVTPPVKIDTPSSDSGKTPAAVPAPTPRPED 60

Query: 61  LPQSTSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFR 120
           LPQS SPDP+HLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRN+IVKNFR
Sbjct: 61  LPQSASPDPVHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNAIVKNFR 120

Query: 121 ECPSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWEDRDSKSNASA 180
           ECPSKKITFTD+RKTLVADVGSIRRVFDFLEAWGL+NYSPSAL+KPLKWEDRDSKSN+SA
Sbjct: 121 ECPSKKITFTDVRKTLVADVGSIRRVFDFLEAWGLVNYSPSALNKPLKWEDRDSKSNSSA 180

Query: 181 SHTGEPGGSSADSSASKDSSKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVV 240
           SHTGEPGGSSADS+A KD+SKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGV 
Sbjct: 181 SHTGEPGGSSADSAAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVS 240

Query: 241 SSDFRRVEINDDTRTDWTDKETLHLLEALMHYGDDWKKVAQHVGGRTERECVAHFVKLPL 300
           SSDFRRVEIND+TRTDWTDKETLHLLEAL H+GDDWKKVAQHVGGRTERECVAHFVKLPL
Sbjct: 241 SSDFRRVEINDETRTDWTDKETLHLLEALTHHGDDWKKVAQHVGGRTERECVAHFVKLPL 300

Query: 301 GEQFHGYPDSGNIDTYTVAKDHASANLALESAGTSLPSKRIRLSPLADASNPIMAQAAFL 360
           GEQF GYPDSGN+   TV KDHASA+L LES  T L SKRIRLSPLADASNPIMAQAAFL
Sbjct: 301 GEQFLGYPDSGNVGGRTVVKDHASADLTLES--TPLTSKRIRLSPLADASNPIMAQAAFL 360

Query: 361 SSLVGVEVAKAAAHAAVIKLSDMDSGGDEEIGRAIARDIGEQGYLLTVNEVGWTYHNSCG 420
           SSLVGVEVA+AAAHAAV+KLSDM  GGD EI  A+AR+IG+Q                  
Sbjct: 361 SSLVGVEVAEAAAHAAVVKLSDMGFGGDGEIATAVARNIGDQ------------------ 420

Query: 421 SDSGNDVASCGGSSFRGS---------------SMEVEKAISHILDVQMKEIVDKLVRFE 480
              GNDV SCGGS+ R S                + VEKAISHILDVQMKE VDKL R E
Sbjct: 421 ---GNDVVSCGGSTARSSFSVSSVDANSQIEKEEVAVEKAISHILDVQMKEAVDKLDRLE 480

Query: 481 EVDLQMEKEFKQLEQMKSMLFVDQLNLLFNKDCIPTVEDKNSMNVRT 513
           EVDLQMEKEFKQL+QMKSMLFVDQLNLLF K CIPT+EDKNS N+ T
Sbjct: 481 EVDLQMEKEFKQLDQMKSMLFVDQLNLLFRKGCIPTIEDKNSKNLST 501

[Close]

BLAST of Clc11G20490 vs. NCBI nr
Match: XP_023515051.1 (SWI/SNF complex subunit SWI3B [Cucurbita pepo subsp. pepo])

HSP 1 Score: 795.8 bits (2054), Expect = 2.2e-226
Identity = 422/527 (80.08%), Postives = 451/527 (85.58%), Query Frame = 0


Query: 1   MAANSPVQDPSTMDASAKQPAPSPSPSPALVTPPLKIETPPSDSGQTPSVVPTPTPRPEE 60
           MAAN PVQDP T DASAKQ  P+PSPSP LVTPP+KI+TP SDSG+TP+ VP  TPRPE+
Sbjct: 1   MAANLPVQDPPT-DASAKQ--PTPSPSPTLVTPPVKIDTPSSDSGKTPAAVPASTPRPED 60

Query: 61  LPQSTSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFR 120
           LPQS SPDP+HLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRN+IVKNFR
Sbjct: 61  LPQSASPDPVHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNAIVKNFR 120

Query: 121 ECPSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWEDRDSKSNASA 180
           ECPSKKITFTD+RKTLVADVGSIRRVFDFLEAWGL+NYSPSAL+KPLKWEDRDSKSN+SA
Sbjct: 121 ECPSKKITFTDVRKTLVADVGSIRRVFDFLEAWGLVNYSPSALNKPLKWEDRDSKSNSSA 180

Query: 181 SHTGEPGGSSADSSASKDSSKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVV 240
           SHTGEPGGSSADSSA KD+SKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGV 
Sbjct: 181 SHTGEPGGSSADSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVS 240

Query: 241 SSDFRRVEINDDTRTDWTDKETLHLLEALMHYGDDWKKVAQHVGGRTERECVAHFVKLPL 300
           SSDFRRVEIND+TRTDWTDKETLHLLEAL H+GDDWKKVAQHVGGRTERECVAHFVKLPL
Sbjct: 241 SSDFRRVEINDETRTDWTDKETLHLLEALTHHGDDWKKVAQHVGGRTERECVAHFVKLPL 300

Query: 301 GEQFHGYPDSGNIDTYTVAKDHASANLALESAGTSLPSKRIRLSPLADASNPIMAQAAFL 360
           GEQF GYPDSGN+   TV KDHASA+L LES  T L SKRIRLSPLADASNPIMAQAAFL
Sbjct: 301 GEQFLGYPDSGNVGGRTVVKDHASADLTLES--TPLTSKRIRLSPLADASNPIMAQAAFL 360

Query: 361 SSLVGVEVAKAAAHAAVIKLSDMDSGGDEEIGRAIARDIGEQGYLLTVNEVGWTYHNSCG 420
           SSLVGVEVA+AAAHAAV+KLSDM  GGD EI  A+AR+IG+Q                  
Sbjct: 361 SSLVGVEVAEAAAHAAVVKLSDMGFGGDGEIATAVARNIGDQ------------------ 420

Query: 421 SDSGNDVASCGGSSFRGS---------------SMEVEKAISHILDVQMKEIVDKLVRFE 480
              GN+V SCGGS+ R S                + VEKAISHILDVQMKE VDKL R E
Sbjct: 421 ---GNNVVSCGGSTARSSFSVSSVDANSQIEKEEVAVEKAISHILDVQMKEAVDKLDRLE 480

Query: 481 EVDLQMEKEFKQLEQMKSMLFVDQLNLLFNKDCIPTVEDKNSMNVRT 513
           EVDLQMEKEFKQL+QMKSMLFVDQLNLLF+K CIPT+EDKNS N+ T
Sbjct: 481 EVDLQMEKEFKQLDQMKSMLFVDQLNLLFHKGCIPTIEDKNSKNLST 501

[Close]

BLAST of Clc11G20490 vs. ExPASy Swiss-Prot
Match: Q84JG2 (SWI/SNF complex subunit SWI3B OS=Arabidopsis thaliana OX=3702 GN=SWI3B PE=1 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 7.8e-118
Identity = 245/483 (50.72%), Postives = 328/483 (67.91%), Query Frame = 0


Query: 41  PSDSGQ----TPSVVPTPT------PRPEELPQSTSP-DPIHLPSYSRWFSWNGIHECEV 100
           P  SG+    TPS+  T +       +  +LP S+S  D IH+PSYS WFSW  I++CEV
Sbjct: 8   PGGSGEILPSTPSLSETTSGGAAAASKSAQLPSSSSDIDNIHVPSYSSWFSWTDINDCEV 67

Query: 101 RFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECPSKKITFTDIRKTLVADVGSIRRVFDF 160
           R LPEFFDSRS SKNP+ Y YLRNSI+K +R+   +KI+FTD+R+TLV+DV SIRRVFDF
Sbjct: 68  RSLPEFFDSRSSSKNPKFYLYLRNSIIKQYRDDHPRKISFTDVRRTLVSDVVSIRRVFDF 127

Query: 161 LEAWGLINYSPSALSKPLKWEDRDSKSNASASHTGEPGGSSADSSAS--KDSSKRVCSGC 220
           L++WGLINY+ SA +KPLKWE++++         G+  G +A   A+  K+++KR C+GC
Sbjct: 128 LDSWGLINYNSSASAKPLKWEEKEA---------GKSAGDAASEPATTVKETAKRNCNGC 187

Query: 221 KSICSIACFACDKFDLTLCARCYVRGNYRVGVVSSDFRRVEINDDTRTDWTDKETLHLLE 280
           K+ICSIACFACDK+DLTLCARCYVR NYRVG+ SS+F+RVEI+++++ +W+DKE L LLE
Sbjct: 188 KAICSIACFACDKYDLTLCARCYVRSNYRVGINSSEFKRVEISEESKPEWSDKEILLLLE 247

Query: 281 ALMHYGDDWKKVAQHVGGRTERECVAHFVKLPLGEQFHGYPDS-GNIDTYTVAKD-HASA 340
           A+MHYGDDWKKVA HV GRTE++CV+ FVKLP GEQF    DS   ++ +   KD     
Sbjct: 248 AVMHYGDDWKKVASHVIGRTEKDCVSQFVKLPFGEQFVKESDSEDGLEMFDQIKDSDIPE 307

Query: 341 NLALESAGTSLPSKRIRLSPLADASNPIMAQAAFLSSLVGVEVAKAAAHAAVIKLSDMDS 400
           +  ++  G+S P+KRI+L+PLADASNPIMAQAAFLS+L G  VA+AAA AAV  LSD+D 
Sbjct: 308 SEGIDKDGSS-PNKRIKLTPLADASNPIMAQAAFLSALAGTNVAEAAARAAVRALSDVDY 367

Query: 401 GGDEEIGRAIARDIGEQGYLLTVNEVGWTYHNSCGSDSGNDVASC---GGSSFRGSSMEV 460
             D+   R   R                    S G  + N+         S       EV
Sbjct: 368 EADKNASRDPNRQDANAA--------------SSGETTRNESERAWADAKSLIEKEEHEV 427

Query: 461 EKAISHILDVQMKEIVDKLVRFEEVDLQMEKEFKQLEQMKSMLFVDQLNLLFNKDCIPTV 506
           E AI   ++V+MK+I D++V FE++DL+ME+  KQLE+++++LFVDQLN+ F+       
Sbjct: 428 EGAIKETVEVEMKKIRDRIVHFEKLDLEMERSRKQLEEVRNLLFVDQLNIFFHTRKARKT 466

[Close]

BLAST of Clc11G20490 vs. ExPASy Swiss-Prot
Match: Q0JCC3 (SWI/SNF complex subunit SWI3A homolog OS=Oryza sativa subsp. japonica OX=39947 GN=SWI3A PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 7.5e-36
Identity = 137/506 (27.08%), Postives = 223/506 (44.07%), Query Frame = 0


Query: 72  LPSYSRWFSWNGIHECEVRFLPEFFDSR------SPSKNPRVYKYLRNSIVKNFRECPSK 131
           +P+ S WF W+ IHE E R LPEFF         + S+NPR+Y+  R+ I+  +RE  S+
Sbjct: 26  IPASSGWFQWDEIHETERRALPEFFGGAGGSGFGTASRNPRIYREYRDYIISRYREDTSR 85

Query: 132 KITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWEDRDSKSNA------- 191
           ++TFT++RK LV DV  +R++F FL++ GLIN+S S      + + R +++ A       
Sbjct: 86  RLTFTEVRKALVGDVTLLRKLFAFLDSSGLINFSASPSRPEAQQQQRQTEAEAVVEAPVG 145

Query: 192 --------SASHTGEPGGSSADS-------SASKDSSKRVCSGCKSICSIACFACD---- 251
                    +    E GG   ++       ++  D       G   IC +    C     
Sbjct: 146 LQVTPRPPPSYFAEEKGGGGNENGFRLPPLTSYSDVFGEWAPGMAPICGLCGMECRDGNA 205

Query: 252 ---KFDLTLCARCYVRG-NYRVGVVSSDFRRVEINDDTRTDWTDKETLHLLEALMHYGDD 311
              K    +C++CY    N     +    ++  I++ + + WTD ETL LLE ++ +GDD
Sbjct: 206 QILKDGFKVCSKCYANNDNKGEANIHPGDKKERIDNHSSSAWTDAETLLLLEGVLKHGDD 265

Query: 312 WKKVAQHVGGRTERECVAHFVKLPLGEQFHG-------------YPDSGNIDTYTVAKDH 371
           W  +AQHV  + + EC+A  ++LP GE   G                 G ++  TV +  
Sbjct: 266 WDLIAQHVRTKNKSECIARLIQLPFGEHMLGTVNGKLDNRLHKIQTTDGKVNKSTVKESS 325

Query: 372 ASANLAL---------ESAGTSL---PSKRIRLSPLADASNPIMAQAAFLSSLVGVEVAK 431
           +     +         + A  S+   P+K  RL    D +  +M Q A L++    +V  
Sbjct: 326 SQPTETVDDMQIDGNEDGADKSVEEHPTKHRRLFSSIDITVSLMEQLAHLTTSTSPDVVA 385

Query: 432 AAAHAAVIKL------------------------------SDMDSGGDEEIGRAIARDIG 486
           AAA AA+  L                              SD   GGD ++      D  
Sbjct: 386 AAADAAIKALGNENPQARRAFQLSEKEYQTRAFSSNHARQSDDVGGGDRDVEMHGHPD-K 445

[Close]

BLAST of Clc11G20490 vs. ExPASy Swiss-Prot
Match: Q92922 (SWI/SNF complex subunit SMARCC1 OS=Homo sapiens OX=9606 GN=SMARCC1 PE=1 SV=3)

HSP 1 Score: 144.8 bits (364), Expect = 2.7e-33
Identity = 109/369 (29.54%), Postives = 164/369 (44.44%), Query Frame = 0


Query: 70  IHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECPSKKITF 129
           I +PSY+ WF +N IH  E R LPEFF+ ++ SK P +Y   RN ++  +R  P + +T 
Sbjct: 449 IIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTS 508

Query: 130 TDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWED---------RDSKSNASA 189
           T  R+ L  DV ++ RV  FLE WGL+NY     S+P+              D+ S    
Sbjct: 509 TACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDPESRPMAMGPPPTPHFNVLADTPSGLVP 568

Query: 190 SHTGEPGGSSADSSAS---KDSSKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRV 249
            H   P   +A    +   K+  K V                 F L            R 
Sbjct: 569 LHLRSPQVPAAQQMLNFPEKNKEKPV-------------DLQNFGL------------RT 628

Query: 250 GVVSSDFRRVEINDDTRTDWTDKETLHLLEALMHYGDDWKKVAQHVGGRTERECVAHFVK 309
            + S              +WT++ETL LLEAL  Y DDW KV++HVG RT+ EC+ HF++
Sbjct: 629 DIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLR 688

Query: 310 LPLGEQFHGYPDSGNIDTYTVAKDHASANLALESAGTSLPSKRIRLSPLADASNPIMAQA 369
           LP+ + +                        LE++  SL     +  P + + NP+M+  
Sbjct: 689 LPIEDPY------------------------LENSDASLGPLAYQPVPFSQSGNPVMSTV 748

Query: 370 AFLSSLVGVEVAKAAAHAAVIKLSDMDSGGDEEIGRAIARDIGEQGYLLTVNEVGWTYHN 427
           AFL+S+V   VA AAA AA+ + S +      E+  A  + + E        +  +   +
Sbjct: 749 AFLASVVDPRVASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLES 768

[Close]

BLAST of Clc11G20490 vs. ExPASy Swiss-Prot
Match: O14470 (SWI/SNF and RSC complexes subunit ssr2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ssr2 PE=1 SV=3)

HSP 1 Score: 141.4 bits (355), Expect = 2.9e-32
Identity = 93/283 (32.86%), Postives = 141/283 (49.82%), Query Frame = 0


Query: 69  PIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECPSKKIT 128
           PI +PSY+ WF  + IH+ E R  PEFF+ +SP K P +YK  R+ ++ ++R  P++ +T
Sbjct: 17  PIIVPSYAGWFDMSKIHDIERRSNPEFFNGKSPLKTPSIYKDYRDFMINSYRLEPNEYLT 76

Query: 129 FTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWEDRDSKSNASASHT----- 188
            T  R+ LV DV +I RV  FLE WGLINY     ++P       S    + S+T     
Sbjct: 77  VTACRRNLVGDVCAIIRVHAFLEQWGLINYQIDPETRPAFRLPPISGHVQAISNTPIVTQ 136

Query: 189 ---------GEPGGSSA-------------------DSSASKDSSK--------RVCSGC 248
                       GGSS+                    +S  ++  K        +VC  C
Sbjct: 137 EMLAQHPPPSTVGGSSSQEFVKLEEKHYSPSLNAMEQTSPKEEDEKSDKVPRVDKVCFTC 196

Query: 249 KSICSIACF---ACDKFDLTLCARCYVRGNYRVGVVSSDF---RRVEINDDTRTDWTDKE 305
              CS   +      K+D  +C  CY +G +     SSDF     ++ N D    W+++E
Sbjct: 197 GVNCSQTWYHNLKNKKYD--ICPNCYKQGRFSSSFNSSDFLCMDAIDFNHDEEKPWSNQE 256

[Close]

BLAST of Clc11G20490 vs. ExPASy Swiss-Prot
Match: P97496 (SWI/SNF complex subunit SMARCC1 OS=Mus musculus OX=10090 GN=Smarcc1 PE=1 SV=2)

HSP 1 Score: 141.0 bits (354), Expect = 3.8e-32
Identity = 111/387 (28.68%), Postives = 171/387 (44.19%), Query Frame = 0


Query: 52  PTPTPRPEELPQSTSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYL 111
           P+ +  P E   +   + I +PSY+ WF +N IH  E R LPEFF+ ++ SK P +Y   
Sbjct: 430 PSRSVDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAY 489

Query: 112 RNSIVKNFRECPSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWED 171
           RN ++  +R  P + +T T  R+ L  DV ++ RV  FLE WGL+NY     S+P+    
Sbjct: 490 RNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDPESRPMAMGP 549

Query: 172 ---------RDSKSNASASHTGEPGGSSADSSAS---KDSSKRVCSGCKSICSIACFACD 231
                     D+ S     H   P   +A    +   K+  K +                
Sbjct: 550 PPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPI-------------DLQ 609

Query: 232 KFDLTLCARCYVRGNYRVGVVSSDFRRVEINDDTRTDWTDKETLHLLEALMHYGDDWKKV 291
            F L            R  + S              +WT++ETL LLEAL  Y DDW KV
Sbjct: 610 NFGL------------RTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKV 669

Query: 292 AQHVGGRTERECVAHFVKLPLGEQFHGYPDSGNIDTYTVAKDHASANLALESAGTSLPSK 351
           ++HVG RT+ EC+ HF++LP+ + +                        LE++  SL   
Sbjct: 670 SEHVGSRTQDECILHFLRLPIEDPY------------------------LENSDASLGPL 729

Query: 352 RIRLSPLADASNPIMAQAAFLSSLVGVEVAKAAAHAAVIKLSDMDSGGDEEIGRAIARDI 411
             +  P + + NP+M+  AFL+S+V   VA AAA AA+ + S +      E+  A  + +
Sbjct: 730 AYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPLELVEAHVKKV 767

Query: 412 GEQGYLLTVNEVGWTYHNSCGSDSGND 427
            E        +  +   +SC + +G D
Sbjct: 790 QEAARASGKVDPTYGLESSCIAGTGPD 767

[Close]

BLAST of Clc11G20490 vs. ExPASy TrEMBL
Match: A0A1S3BW08 (SWI/SNF complex subunit SWI3B OS=Cucumis melo OX=3656 GN=LOC103493854 PE=4 SV=1)

HSP 1 Score: 823.5 bits (2126), Expect = 4.7e-235
Identity = 437/514 (85.02%), Postives = 457/514 (88.91%), Query Frame = 0


Query: 1   MAANSPVQDPSTMDASAKQPAPSPSPSPALVTPPLKIETPPSDSGQTPSVVPTPTPRPEE 60
           MAANSPVQDP T DASAKQ A  PSPSPALVTPPLKIETPPSDSGQTPS VP PTPRP++
Sbjct: 1   MAANSPVQDPPT-DASAKQSA--PSPSPALVTPPLKIETPPSDSGQTPSAVPAPTPRPDD 60

Query: 61  LPQSTSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFR 120
           LPQ TSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFR
Sbjct: 61  LPQPTSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFR 120

Query: 121 ECPSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWEDRDSKSNASA 180
           ECPSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWEDRDSKSNASA
Sbjct: 121 ECPSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWEDRDSKSNASA 180

Query: 181 SHTGEPGGSSADSSASKDSSKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVV 240
           S+TGEPGG SA+SSA KD+SKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVV
Sbjct: 181 SNTGEPGGGSANSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVV 240

Query: 241 -SSDFRRVEINDDTRTDWTDKETLHLLEALMHYGDDWKKVAQHVGGRTERECVAHFVKLP 300
            SSDFRRVEINDDTRTDWTDKETLHLLEAL HYGDDWKKVAQHVGGRTERECVAHFVKLP
Sbjct: 241 SSSDFRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTERECVAHFVKLP 300

Query: 301 LGEQFHGYPDSGNID-TYTVAKDHASANLALESAGTSLPSKRIRLSPLADASNPIMAQAA 360
           LGEQFHGYPDS +ID  YTV KDHASANL LES G S+P+KRIRLSPLADASNPIMAQAA
Sbjct: 301 LGEQFHGYPDSEHIDNNYTVVKDHASANLTLESTGASIPNKRIRLSPLADASNPIMAQAA 360

Query: 361 FLSSLVGVEVAKAAAHAAVIKLSDMDSGGDEEIGRAIARDIGEQGYLLTVNEVGWTYHNS 420
           FLSSLVG+EVA+AAA AAVIKLS+MD G D EI R IAR+  EQ                
Sbjct: 361 FLSSLVGIEVAEAAAQAAVIKLSEMDFGRDGEIARPIARNTEEQ---------------- 420

Query: 421 CGSDSGNDVASCGGSSFRGSSMEVEKAISHILDVQMKEIVDKLVRFEEVDLQMEKEFKQL 480
                GNDVASC GS  RGSSM++EKAISHI+DVQMKE VDKL  FEE +LQMEK FKQL
Sbjct: 421 -----GNDVASCEGSLLRGSSMDMEKAISHIVDVQMKEFVDKLNGFEEGELQMEKVFKQL 480

Query: 481 EQMKSMLFVDQLNLLFNKDCIPTVEDKNSMNVRT 513
           +QMKSMLFVDQLNLLFNK C+PTVEDK++MNVRT
Sbjct: 481 DQMKSMLFVDQLNLLFNKGCVPTVEDKSNMNVRT 490

[Close]

BLAST of Clc11G20490 vs. ExPASy TrEMBL
Match: A0A0A0L3F9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G664510 PE=4 SV=1)

HSP 1 Score: 803.9 bits (2075), Expect = 3.9e-229
Identity = 432/517 (83.56%), Postives = 455/517 (88.01%), Query Frame = 0


Query: 1   MAANSPVQDPSTMDASAKQPAPSPSPSPALVTPPLKIETPPSDSGQTPSVVPTPTPRPEE 60
           MAANSPVQDP T DASAKQ A  PSPSPALVTPPLKIETPPSDSGQTPS VP PTPRPE+
Sbjct: 63  MAANSPVQDPPT-DASAKQSA--PSPSPALVTPPLKIETPPSDSGQTPSAVPAPTPRPED 122

Query: 61  LPQSTSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFR 120
           LPQSTSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFR
Sbjct: 123 LPQSTSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFR 182

Query: 121 ECPSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWEDRDSKSNASA 180
           ECPSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKW+DRDSKSNASA
Sbjct: 183 ECPSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWDDRDSKSNASA 242

Query: 181 SHTGEPGGSSADSSASKDSSKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVV 240
           S+TGEPGG SA+SSA KD+SKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGV 
Sbjct: 243 SNTGEPGGGSANSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVS 302

Query: 241 SSDFRRVEINDDTRTDWTDKETLHLLEALMHYGDDWKKVAQHVGGRTERECVAHFVKLPL 300
           SSDFRRVEINDDTRTDWTDKETLHLLEAL HYGDDWKKVAQHVGGRTERECVA FVKLPL
Sbjct: 303 SSDFRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTERECVAQFVKLPL 362

Query: 301 GEQFHGYPDSGNIDTYTVAKDHASANLALESA---GTSLPSKRIRLSPLADASNPIMAQA 360
           GEQFHGYPDS +ID     KD ASANL LES    GTS+P+KRIRLSPLADASNPIMAQA
Sbjct: 363 GEQFHGYPDSEHIDNNCTVKDEASANLTLESTGKIGTSIPNKRIRLSPLADASNPIMAQA 422

Query: 361 AFLSSLVGVEVAKAAAHAAVIKLSDMDSGGDEEIGRAIARDIGEQGYLLTVNEVGWTYHN 420
           AFLSSLVGVEVA+AAA AAVIKLS+MD GGD EI   +AR+IGEQ               
Sbjct: 423 AFLSSLVGVEVAEAAAQAAVIKLSEMDFGGDGEIAIPVARNIGEQ--------------- 482

Query: 421 SCGSDSGNDVASCGGSSF-RGSSMEVEKAISHILDVQMKEIVDKLVRFEEVDLQMEKEFK 480
                 GND AS GGS   RGS+M++EKAISHI++VQMKEIVDKL  FEE +LQMEK FK
Sbjct: 483 ------GNDAASHGGSCLSRGSTMDMEKAISHIVNVQMKEIVDKLNGFEEGELQMEKVFK 542

Query: 481 QLEQMKSMLFVDQLNLLFNKDCI-PTVEDKNSMNVRT 513
           QL+QMKSMLFVDQLNLLFNK+CI  TVE+K++MNVRT
Sbjct: 543 QLDQMKSMLFVDQLNLLFNKECISTTVEEKSNMNVRT 555

[Close]

BLAST of Clc11G20490 vs. ExPASy TrEMBL
Match: A0A6J1F6D7 (SWI/SNF complex subunit SWI3B OS=Cucurbita moschata OX=3662 GN=LOC111442757 PE=4 SV=1)

HSP 1 Score: 794.3 bits (2050), Expect = 3.1e-226
Identity = 420/527 (79.70%), Postives = 450/527 (85.39%), Query Frame = 0


Query: 1   MAANSPVQDPSTMDASAKQPAPSPSPSPALVTPPLKIETPPSDSGQTPSVVPTPTPRPEE 60
           MAAN PVQDP T DASAK   P+PSPSP LVTPP+KI+TP SDSG+TP+ VP PTPRPE+
Sbjct: 1   MAANLPVQDPPT-DASAKH--PTPSPSPTLVTPPVKIDTPSSDSGKTPAAVPAPTPRPED 60

Query: 61  LPQSTSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFR 120
           LPQS SPDP+HLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRN+IVKNFR
Sbjct: 61  LPQSASPDPVHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNAIVKNFR 120

Query: 121 ECPSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWEDRDSKSNASA 180
           ECPSKKITFT++RKTLVADVGSIRRVFDFLEAWGL+NYSPSAL+KPLKWEDRDSKSN+SA
Sbjct: 121 ECPSKKITFTEVRKTLVADVGSIRRVFDFLEAWGLVNYSPSALNKPLKWEDRDSKSNSSA 180

Query: 181 SHTGEPGGSSADSSASKDSSKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVV 240
           SHTGEPGGSSADS+A KD+SKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGV 
Sbjct: 181 SHTGEPGGSSADSAAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVS 240

Query: 241 SSDFRRVEINDDTRTDWTDKETLHLLEALMHYGDDWKKVAQHVGGRTERECVAHFVKLPL 300
           SSDFRRVEIND+TRTDWTDKETLHLLEAL H+GDDWKKVAQHVGGRTERECVAHFVKLPL
Sbjct: 241 SSDFRRVEINDETRTDWTDKETLHLLEALTHHGDDWKKVAQHVGGRTERECVAHFVKLPL 300

Query: 301 GEQFHGYPDSGNIDTYTVAKDHASANLALESAGTSLPSKRIRLSPLADASNPIMAQAAFL 360
           GEQF GYPDSGN+   TV KDHASA+L LES  T L SKRIRLSPLADASNPIMAQAAFL
Sbjct: 301 GEQFLGYPDSGNVGGRTVVKDHASADLTLES--TPLTSKRIRLSPLADASNPIMAQAAFL 360

Query: 361 SSLVGVEVAKAAAHAAVIKLSDMDSGGDEEIGRAIARDIGEQGYLLTVNEVGWTYHNSCG 420
           SSLVGVEVA+AAAHAAV+KLSDM  GGD EI  A+AR+IG+Q                  
Sbjct: 361 SSLVGVEVAEAAAHAAVVKLSDMGFGGDGEIATAVARNIGDQ------------------ 420

Query: 421 SDSGNDVASCGGSSFRGS---------------SMEVEKAISHILDVQMKEIVDKLVRFE 480
              GNDV SCGGS+ R S                + VEKAISHILDVQ+KE VDKL R E
Sbjct: 421 ---GNDVVSCGGSTARSSFSVSSVDANSQIEKEEVAVEKAISHILDVQIKEAVDKLDRLE 480

Query: 481 EVDLQMEKEFKQLEQMKSMLFVDQLNLLFNKDCIPTVEDKNSMNVRT 513
           EVDLQMEKEFKQL+QMKSMLFVDQLNLLF K CIPT+EDKNS N+ T
Sbjct: 481 EVDLQMEKEFKQLDQMKSMLFVDQLNLLFRKGCIPTIEDKNSKNLST 501

[Close]

BLAST of Clc11G20490 vs. ExPASy TrEMBL
Match: A0A6J1IDY0 (SWI/SNF complex subunit SWI3B OS=Cucurbita maxima OX=3661 GN=LOC111474552 PE=4 SV=1)

HSP 1 Score: 790.0 bits (2039), Expect = 5.8e-225
Identity = 420/527 (79.70%), Postives = 449/527 (85.20%), Query Frame = 0


Query: 1   MAANSPVQDPSTMDASAKQPAPSPSPSPALVTPPLKIETPPSDSGQTPSVVPTPTPRPEE 60
           MAAN PVQDP T DASAKQ  P+PSPSP LVTPP+KI+TP SDSG+TP+ VP  TPRPE+
Sbjct: 1   MAANLPVQDPPT-DASAKQ--PTPSPSPTLVTPPVKIDTPSSDSGKTPAAVPASTPRPED 60

Query: 61  LPQSTSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFR 120
           LPQS SPDP+HLPSYSRWFSWNGIHECEVRFLPEFF+SRSPSKNPRVYKYLRN+IVKNFR
Sbjct: 61  LPQSASPDPVHLPSYSRWFSWNGIHECEVRFLPEFFNSRSPSKNPRVYKYLRNAIVKNFR 120

Query: 121 ECPSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWEDRDSKSNASA 180
           ECPSKKITFTD+RKTLVADVGSIRRVFDFLEAWGL+NYSPS L+KPLKWEDRDSKSN+SA
Sbjct: 121 ECPSKKITFTDVRKTLVADVGSIRRVFDFLEAWGLVNYSPSVLNKPLKWEDRDSKSNSSA 180

Query: 181 SHTGEPGGSSADSSASKDSSKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVV 240
           SHTGEPGGSSADSSA KD+SKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGV 
Sbjct: 181 SHTGEPGGSSADSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVS 240

Query: 241 SSDFRRVEINDDTRTDWTDKETLHLLEALMHYGDDWKKVAQHVGGRTERECVAHFVKLPL 300
           SSDFRRVEIND+TRTDWTDKETLHLLEAL H+GDDWKKVAQHVGGRTERECVAHFVKLPL
Sbjct: 241 SSDFRRVEINDETRTDWTDKETLHLLEALTHHGDDWKKVAQHVGGRTERECVAHFVKLPL 300

Query: 301 GEQFHGYPDSGNIDTYTVAKDHASANLALESAGTSLPSKRIRLSPLADASNPIMAQAAFL 360
           GEQF GYPDSGN+   TV KDHASA+L LES  T L SKRIRLSPLADASNPIMAQAAFL
Sbjct: 301 GEQFLGYPDSGNVGGRTVVKDHASADLTLES--TPLTSKRIRLSPLADASNPIMAQAAFL 360

Query: 361 SSLVGVEVAKAAAHAAVIKLSDMDSGGDEEIGRAIARDIGEQGYLLTVNEVGWTYHNSCG 420
           SSLVGVEVA+AAAHAAV+KLSDM  GGD EI  A+AR+IG+Q                  
Sbjct: 361 SSLVGVEVAEAAAHAAVVKLSDMGFGGDGEIATAVARNIGDQ------------------ 420

Query: 421 SDSGNDVASCGGSSFRGS---------------SMEVEKAISHILDVQMKEIVDKLVRFE 480
              GNDV SCGGS+ R S                + VEKAISHILDVQMKE VDKL R E
Sbjct: 421 ---GNDVVSCGGSTARSSFSVSSVDANSQIEKEEVAVEKAISHILDVQMKEAVDKLDRLE 480

Query: 481 EVDLQMEKEFKQLEQMKSMLFVDQLNLLFNKDCIPTVEDKNSMNVRT 513
           EVDLQMEKEFKQL+QMKSMLFVDQLNLLF+K  IPT+EDKNS N+ T
Sbjct: 481 EVDLQMEKEFKQLDQMKSMLFVDQLNLLFHKGYIPTIEDKNSKNLST 501

[Close]

BLAST of Clc11G20490 vs. ExPASy TrEMBL
Match: A0A5D3D8W2 (SWI/SNF complex subunit SWI3B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00310 PE=4 SV=1)

HSP 1 Score: 758.1 bits (1956), Expect = 2.4e-215
Identity = 404/475 (85.05%), Postives = 420/475 (88.42%), Query Frame = 0


Query: 1   MAANSPVQDPSTMDASAKQPAPSPSPSPALVTPPLKIETPPSDSGQTPSVVPTPTPRPEE 60
           MAANSPVQDP T DASAKQ A  PSPSPALVTPPLKIETPPSDSGQTPS VP PTPRP++
Sbjct: 71  MAANSPVQDPPT-DASAKQSA--PSPSPALVTPPLKIETPPSDSGQTPSAVPAPTPRPDD 130

Query: 61  LPQSTSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFR 120
           LPQ TSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFR
Sbjct: 131 LPQPTSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFR 190

Query: 121 ECPSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWEDRDSKSNASA 180
           ECPSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWEDRDSKSNASA
Sbjct: 191 ECPSKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWEDRDSKSNASA 250

Query: 181 SHTGEPGGSSADSSASKDSSKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVV 240
           S+TGEPGG SA+SSA KD+SKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVV
Sbjct: 251 SNTGEPGGGSANSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVV 310

Query: 241 -SSDFRRVEINDDTRTDWTDKETLHLLEALMHYGDDWKKVAQHVGGRTERECVAHFVKLP 300
            SSDFRRVEINDDTRTDWTDKETLHLLEAL HYGDDWKKVAQHVGGRTERECVAHFVKLP
Sbjct: 311 SSSDFRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTERECVAHFVKLP 370

Query: 301 LGEQFHGYPDSGNID-TYTVAKDHASANLALESAGTSLPSKRIRLSPLADASNPIMAQAA 360
           LGEQFHGYPDS +ID  YTV KDHASANL LES G S+P+KRIRLSPLADASNPIMAQAA
Sbjct: 371 LGEQFHGYPDSEHIDNNYTVVKDHASANLTLESTGASIPNKRIRLSPLADASNPIMAQAA 430

Query: 361 FLSSLVGVEVAKAAAHAAVIKLSDMDSGGDEEIGRAIARDIGEQGYLLTVNEVGWTYHNS 420
           FLSSLVG+EVA+AAA AAVIKLS+MD G D EI R IAR+  EQ                
Sbjct: 431 FLSSLVGIEVAEAAAQAAVIKLSEMDFGRDGEIARPIARNTEEQ---------------- 490

Query: 421 CGSDSGNDVASCGGSSFRGSSMEVEKAISHILDVQMKEIVDKLVRFEEVDLQMEK 474
                GNDVASC GS  RGSSM++EKAISHI+DVQMKE VDKL  FEE +LQMEK
Sbjct: 491 -----GNDVASCEGSLLRGSSMDMEKAISHIVDVQMKEFVDKLNGFEEGELQMEK 521

[Close]

BLAST of Clc11G20490 vs. TAIR 10
Match: AT2G33610.1 (switch subunit 3 )

HSP 1 Score: 425.6 bits (1093), Expect = 5.5e-119
Identity = 245/483 (50.72%), Postives = 328/483 (67.91%), Query Frame = 0


Query: 41  PSDSGQ----TPSVVPTPT------PRPEELPQSTSP-DPIHLPSYSRWFSWNGIHECEV 100
           P  SG+    TPS+  T +       +  +LP S+S  D IH+PSYS WFSW  I++CEV
Sbjct: 8   PGGSGEILPSTPSLSETTSGGAAAASKSAQLPSSSSDIDNIHVPSYSSWFSWTDINDCEV 67

Query: 101 RFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECPSKKITFTDIRKTLVADVGSIRRVFDF 160
           R LPEFFDSRS SKNP+ Y YLRNSI+K +R+   +KI+FTD+R+TLV+DV SIRRVFDF
Sbjct: 68  RSLPEFFDSRSSSKNPKFYLYLRNSIIKQYRDDHPRKISFTDVRRTLVSDVVSIRRVFDF 127

Query: 161 LEAWGLINYSPSALSKPLKWEDRDSKSNASASHTGEPGGSSADSSAS--KDSSKRVCSGC 220
           L++WGLINY+ SA +KPLKWE++++         G+  G +A   A+  K+++KR C+GC
Sbjct: 128 LDSWGLINYNSSASAKPLKWEEKEA---------GKSAGDAASEPATTVKETAKRNCNGC 187

Query: 221 KSICSIACFACDKFDLTLCARCYVRGNYRVGVVSSDFRRVEINDDTRTDWTDKETLHLLE 280
           K+ICSIACFACDK+DLTLCARCYVR NYRVG+ SS+F+RVEI+++++ +W+DKE L LLE
Sbjct: 188 KAICSIACFACDKYDLTLCARCYVRSNYRVGINSSEFKRVEISEESKPEWSDKEILLLLE 247

Query: 281 ALMHYGDDWKKVAQHVGGRTERECVAHFVKLPLGEQFHGYPDS-GNIDTYTVAKD-HASA 340
           A+MHYGDDWKKVA HV GRTE++CV+ FVKLP GEQF    DS   ++ +   KD     
Sbjct: 248 AVMHYGDDWKKVASHVIGRTEKDCVSQFVKLPFGEQFVKESDSEDGLEMFDQIKDSDIPE 307

Query: 341 NLALESAGTSLPSKRIRLSPLADASNPIMAQAAFLSSLVGVEVAKAAAHAAVIKLSDMDS 400
           +  ++  G+S P+KRI+L+PLADASNPIMAQAAFLS+L G  VA+AAA AAV  LSD+D 
Sbjct: 308 SEGIDKDGSS-PNKRIKLTPLADASNPIMAQAAFLSALAGTNVAEAAARAAVRALSDVDY 367

Query: 401 GGDEEIGRAIARDIGEQGYLLTVNEVGWTYHNSCGSDSGNDVASC---GGSSFRGSSMEV 460
             D+   R   R                    S G  + N+         S       EV
Sbjct: 368 EADKNASRDPNRQDANAA--------------SSGETTRNESERAWADAKSLIEKEEHEV 427

Query: 461 EKAISHILDVQMKEIVDKLVRFEEVDLQMEKEFKQLEQMKSMLFVDQLNLLFNKDCIPTV 506
           E AI   ++V+MK+I D++V FE++DL+ME+  KQLE+++++LFVDQLN+ F+       
Sbjct: 428 EGAIKETVEVEMKKIRDRIVHFEKLDLEMERSRKQLEEVRNLLFVDQLNIFFHTRKARKT 466

[Close]

BLAST of Clc11G20490 vs. TAIR 10
Match: AT2G47620.1 (SWITCH/sucrose nonfermenting 3A )

HSP 1 Score: 154.5 bits (389), Expect = 2.4e-37
Identity = 129/488 (26.43%), Postives = 217/488 (44.47%), Query Frame = 0


Query: 72  LPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECPSKKITFTD 131
           +P+ S WF W+ IHE E R   EFF   S ++ P+VYK  R+ I+  FRE   +++TFT 
Sbjct: 15  IPAQSSWFLWDDIHEIERREFAEFFTESSITRTPKVYKEYRDFIINKFREDTCRRLTFTS 74

Query: 132 IRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWEDRDSKSNASASHTGEPGG--- 191
           +RK LV DV  +++VF FLE WGLIN+S S     LK  D     + +    G P G   
Sbjct: 75  VRKFLVGDVNLLQKVFLFLEKWGLINFSSS-----LKKNDHLLSVDNAKIEQGTPAGIRV 134

Query: 192 --------------------------------SSADSSASKDSSKRVCSGCKSICSIACF 251
                                           S   S   K     VC+ C   C    +
Sbjct: 135 TATPNSLRPITAPPLVEERVETGIKVPPLTSYSDVFSDLKKPDHVLVCAHCGERCDSPFY 194

Query: 252 ACDKFDLTLCARCYVRGNYRVGVVSSDFRRVEINDDTRTDWTDKETLHLLEALMHYGDDW 311
             +K  + +C +C+  GNY     + DF+   I +     WT++E L LLE+++ +GDDW
Sbjct: 195 QHNKGIVNICEKCFKNGNYGENNTADDFKL--IGNSAAAVWTEEEILLLLESVLKHGDDW 254

Query: 312 KKVAQHVGGRTERECVAHFVKLPLGEQFHG-----------YPDSGNIDTYTVAKDHASA 371
           + ++Q V  ++  +C++  ++LP GE   G             D       T  ++H   
Sbjct: 255 ELISQSVSTKSRLDCISKLIELPFGEFLMGSASGRLNPSILTEDENTEQVQTDGQEHEET 314

Query: 372 NLALESAG----TSLPSKRIRLSPLADASNPIMAQAAFLSSLVGVEVAKAAAHAAVIKLS 431
               E          P+KR R++ +++  + +M Q A ++S VG  VA AAA AA+  L 
Sbjct: 315 ETREEKEDRVNEDEPPAKRKRVALISEGDSSLMKQVAAMASKVGPSVATAAAKAALAALC 374

Query: 432 DMDS------GGDEEIGRAIARDIGEQGYLLTVNE----------VGWTYHNSCGSDSGN 491
           D  S        D+     + R  GE+   +   +          V      S  +  G 
Sbjct: 375 DEASCPKEIFDTDDYSNFTVDRANGEKDTDMEEQQEEKDGPQGLPVALRIRASVATALGA 434

Query: 492 DVASCGGSSFRGSSMEVEKAISHILDVQMKEIVDKLVRFEEVDLQMEKEFKQLEQMKSML 494
             A     + +    E+E+  + +++ Q+K++  KL   ++++  M++E K +E +K  +
Sbjct: 435 AAAQAKILADQ-EEREMEQLAATVIEQQLKKLQSKLKFLDDLESIMDEEEKVIEGVKETI 494

[Close]

BLAST of Clc11G20490 vs. TAIR 10
Match: AT1G21700.1 (SWITCH/sucrose nonfermenting 3C )

HSP 1 Score: 140.2 bits (352), Expect = 4.6e-33
Identity = 145/524 (27.67%), Postives = 231/524 (44.08%), Query Frame = 0


Query: 29  ALVTPPL-KIETPPSDSGQTPSVVPTPTPRPEELPQSTSPDPIH-LPSYSRWFSWNGIHE 88
           AL T P   ++   SD   +  V+  P     E       D +H LP +S WF+ N +  
Sbjct: 133 ALSTVPADSLDLERSDGSSSAYVISPPPIMDGEGVVKRFGDLVHVLPMHSDWFAPNTVDR 192

Query: 89  CEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECPSKKITFTDIRKTL-VADVGSIRR 148
            E + +P+FF  +SP+  P  Y   RN+IV  + E P K +T +D +  +   D+    R
Sbjct: 193 LERQVVPQFFSGKSPNHTPESYMEFRNAIVSKYVENPEKTLTISDCQGLVDGVDIEDFAR 252

Query: 149 VFDFLEAWGLINYSPSALSKPLKW-------EDRDSKSNA-SASHTGEPGGSSADSSASK 208
           VF FL+ WG+INY  +A S P          ED + + N  SA+ T        D    +
Sbjct: 253 VFRFLDHWGIINYCATAQSHPGPLRDVSDVREDTNGEVNVPSAALTSIDSLIKFDKPNCR 312

Query: 209 DSSKRVCSGCKS---------------ICSIACFACD------------KFDLTLCARCY 268
                V S   S               +C   C  C             K D+ LC  C+
Sbjct: 313 HKGGEVYSSLPSLDGDSPDLDIRIREHLCDSHCNHCSRPLPTVYFQSQKKGDILLCCDCF 372

Query: 269 VRGNYRVGVVSSDFRRVE----INDDTRTDWTDKETLHLLEALMHYGDDWKKVAQHVGGR 328
             G + VG    DF RV+      D    +WTD+ETL LLEA+  Y ++W ++A HVG +
Sbjct: 373 HHGRFVVGHSCLDFVRVDPMKFYGDQDGDNWTDQETLLLLEAVELYNENWVQIADHVGSK 432

Query: 329 TERECVAHFVKLPLGE-QFHGYPDSG--NIDTYTVAKDHASANLALESAGTSLPSKRIRL 388
           ++ +C+ HF++LP+ +        SG  N +  T   DH   +   +  G S       +
Sbjct: 433 SKAQCILHFLRLPVEDGLLDNVEVSGVTNTENPTNGYDHKGTDSNGDLPGYSEQGSDTEI 492

Query: 389 S-PLADASNPIMAQAAFLSSLVGVEVAKAAAHAAVIKLSDMDSGGDEEI-GRAIARDIGE 448
             P   + NP+MA  AFL+S VG  VA + AH ++  LS+ D    E + G+  +   GE
Sbjct: 493 KLPFVKSPNPVMALVAFLASAVGPRVAASCAHESLSVLSEDDRMKSEGMQGKEASLLDGE 552

Query: 449 ----QGYLLTVNEVGWTYHNSCGSD-------SGNDVASCGGSSFRG-SSMEVEKAISHI 494
                G   T ++ G         D       +G   A+     F      E+++  ++I
Sbjct: 553 NQQQDGAHKTSSQNGAEAQTPLPQDKVMAAFRAGLSAAATKAKLFADHEEREIQRLSANI 612

[Close]

BLAST of Clc11G20490 vs. TAIR 10
Match: AT4G34430.1 (DNA-binding family protein )

HSP 1 Score: 124.0 bits (310), Expect = 3.4e-28
Identity = 86/293 (29.35%), Postives = 138/293 (47.10%), Query Frame = 0


Query: 72  LPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECPSKKITFTD 131
           +P++  WFSW  IH  E R LP FF+ +   +   VY+ +RN I+  F   P+ +I   D
Sbjct: 147 VPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNIQIELKD 206

Query: 132 IRKTLVADVGSIRRVFDFLEAWGLINYSP-------SALSKPLKWEDRDSKSNA------ 191
           + +  V D  + + V +FL+ WGLIN+ P       S  S      D++S  N+      
Sbjct: 207 LTELEVGDSEAKQEVMEFLDYWGLINFHPFPPTDTGSTASDHDDLGDKESLLNSLYRFQV 266

Query: 192 -----------SASHTGEPGGSSADSSASKDSSKRV-------CSGCKSICSIACFACDK 251
                        +    P G   D  A+ +  K+        C+ C + CS   + C K
Sbjct: 267 DEACPPLVHKPRFTAQATPSGLFPDPMAADELLKQEGPAVEYHCNSCSADCSRKRYHCPK 326

Query: 252 -FDLTLCARCYVRGNYRVGVVSSDFRRVEINDDTRT---DWTDKETLHLLEALMHYGDDW 311
             D  LC  C+  G +   + SSDF  +E  +        WTD+ETL LLEAL  + ++W
Sbjct: 327 QADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPGVGSGKWTDQETLLLLEALEIFKENW 386

Query: 312 KKVAQHVGGRTERECVAHFVKLPLGEQF-----HGYPDSGNIDTYTVAKDHAS 325
            ++A+HV  +T+ +C+ HF+++P+ + F     +  P S +     V+KD  S
Sbjct: 387 NEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYKDPISKDTTDLAVSKDDNS 439

[Close]

BLAST of Clc11G20490 vs. TAIR 10
Match: AT4G34430.4 (DNA-binding family protein )

HSP 1 Score: 124.0 bits (310), Expect = 3.4e-28
Identity = 86/293 (29.35%), Postives = 138/293 (47.10%), Query Frame = 0


Query: 72  LPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECPSKKITFTD 131
           +P++  WFSW  IH  E R LP FF+ +   +   VY+ +RN I+  F   P+ +I   D
Sbjct: 147 VPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNIQIELKD 206

Query: 132 IRKTLVADVGSIRRVFDFLEAWGLINYSP-------SALSKPLKWEDRDSKSNA------ 191
           + +  V D  + + V +FL+ WGLIN+ P       S  S      D++S  N+      
Sbjct: 207 LTELEVGDSEAKQEVMEFLDYWGLINFHPFPPTDTGSTASDHDDLGDKESLLNSLYRFQV 266

Query: 192 -----------SASHTGEPGGSSADSSASKDSSKRV-------CSGCKSICSIACFACDK 251
                        +    P G   D  A+ +  K+        C+ C + CS   + C K
Sbjct: 267 DEACPPLVHKPRFTAQATPSGLFPDPMAADELLKQEGPAVEYHCNSCSADCSRKRYHCPK 326

Query: 252 -FDLTLCARCYVRGNYRVGVVSSDFRRVEINDDTRT---DWTDKETLHLLEALMHYGDDW 311
             D  LC  C+  G +   + SSDF  +E  +        WTD+ETL LLEAL  + ++W
Sbjct: 327 QADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPGVGSGKWTDQETLLLLEALEIFKENW 386

Query: 312 KKVAQHVGGRTERECVAHFVKLPLGEQF-----HGYPDSGNIDTYTVAKDHAS 325
            ++A+HV  +T+ +C+ HF+++P+ + F     +  P S +     V+KD  S
Sbjct: 387 NEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYKDPISKDTTDLAVSKDDNS 439

The following BLAST results are available for this feature:

BLAST of Clc11G20490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453025.2	9.8e-235	85.02	PREDICTED: SWI/SNF complex subunit SWI3B [Cucumis melo]	[more]
XP_004145606.2	8.0e-229	83.56	SWI/SNF complex subunit SWI3B [Cucumis sativus] >KGN55544.1 hypothetical protein...	[more]
XP_038899020.1	3.1e-228	83.66	LOW QUALITY PROTEIN: SWI/SNF complex subunit SWI3B [Benincasa hispida]	[more]
KAG6591190.1	2.0e-227	80.27	SWI/SNF complex subunit SWI3B, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023515051.1	2.2e-226	80.08	SWI/SNF complex subunit SWI3B [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc11G20490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84JG2	7.8e-118	50.72	SWI/SNF complex subunit SWI3B OS=Arabidopsis thaliana OX=3702 GN=SWI3B PE=1 SV=1	[more]
Q0JCC3	7.5e-36	27.08	SWI/SNF complex subunit SWI3A homolog OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q92922	2.7e-33	29.54	SWI/SNF complex subunit SMARCC1 OS=Homo sapiens OX=9606 GN=SMARCC1 PE=1 SV=3	[more]
O14470	2.9e-32	32.86	SWI/SNF and RSC complexes subunit ssr2 OS=Schizosaccharomyces pombe (strain 972 ...	[more]
P97496	3.8e-32	28.68	SWI/SNF complex subunit SMARCC1 OS=Mus musculus OX=10090 GN=Smarcc1 PE=1 SV=2	[more]

BLAST of Clc11G20490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BW08	4.7e-235	85.02	SWI/SNF complex subunit SWI3B OS=Cucumis melo OX=3656 GN=LOC103493854 PE=4 SV=1	[more]
A0A0A0L3F9	3.9e-229	83.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G664510 PE=4 SV=1	[more]
A0A6J1F6D7	3.1e-226	79.70	SWI/SNF complex subunit SWI3B OS=Cucurbita moschata OX=3662 GN=LOC111442757 PE=4...	[more]
A0A6J1IDY0	5.8e-225	79.70	SWI/SNF complex subunit SWI3B OS=Cucurbita maxima OX=3661 GN=LOC111474552 PE=4 S...	[more]
A0A5D3D8W2	2.4e-215	85.05	SWI/SNF complex subunit SWI3B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of Clc11G20490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33610.1	5.5e-119	50.72	switch subunit 3	[more]
AT2G47620.1	2.4e-37	26.43	SWITCH/sucrose nonfermenting 3A	[more]
AT1G21700.1	4.6e-33	27.67	SWITCH/sucrose nonfermenting 3C	[more]
AT4G34430.1	3.4e-28	29.35	DNA-binding family protein	[more]
AT4G34430.4	3.4e-28	29.35	DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 253..301 e-value: 3.4E-10 score: 49.9
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 254..299 score: 7.863002
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 257..298 e-value: 3.68997E-9 score: 50.2666
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 255..298 e-value: 3.9E-12 score: 46.2
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 254..291 score: 9.302569
None	No IPR available	GENE3D	1.10.10.60		coord: 253..302 e-value: 8.5E-15 score: 56.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..68
None	No IPR available	PANTHER	PTHR12802	SWI/SNF COMPLEX-RELATED	coord: 20..505
None	No IPR available	PANTHER	PTHR12802:SF44	SWI/SNF COMPLEX SUBUNIT SWI3B	coord: 20..505
IPR007526	SWIRM domain	PFAM	PF04433	SWIRM	coord: 73..158 e-value: 2.1E-25 score: 88.9
IPR007526	SWIRM domain	PROSITE	PS50934	SWIRM	coord: 70..167 score: 24.877167
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 76..161 e-value: 3.9E-29 score: 102.4
IPR017884	SANT domain	PROSITE	PS51293	SANT	coord: 252..303 score: 20.275166
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 69..172
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 254..305

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc11G20490.2	Clc11G20490.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding