
Clc11G19460 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTGGTTTGTTCCAACAACTTTCTAGAACTGTTTCCAAAAACCCTAAACCCTCTTCTCTAGCCGCGCTATAAATACCCATTCCTCATTTCATTTCTTCCCCTCCAATTTCTCCTCTCTACATATCTCCCTCCATTCTTCAGACTCCCGCAATGGCTTCCAGGTTGATTCTCAAGGACGCCAAATTAGCACTCCGATTCCTTATTCTTCGCAATCCAGCCTCATCCGCTCCCTCAGCACAAACCATCCAGAATCTTCTTCTTCCAATACTTCCAAGGCAATCTGCATCTGGATTACTCGGTGGCGTTTGTTCGAGCGACCGGCCGCTACTGTCTAGGGATTTAAATTCTAGTTTTGATGGCGGACTTAGGATCGAGGTTAGAGGGAAGCGGGAGCCGGAGATTGAGGAGACAGATGAGTTCGGCGAGAACGAAAGCGAGAGCGATCTCGAGTTCTCCGATGACTTCAGTGGGGACGAATTTTCTGACAACGACGATGCAGAGCCTGAGGATGATGATAATTGATTGATCGATATGTCTACATATACTGCTGTTTGAATTTCAATTTTGGATTCATATCGTGTTGATAATTGATGATTTGGTTTCGATATATCCGTAGAATTGAAAGTGCTCGAGTGTTGACATCGATAAATCTGTGTTTTGATACCATTTTGGTCATGGATATTCATTTTTTTTAAGAAATTTTTAGTTCATTCCACTTTTGTTTAGTCC CTGGTTTGTTCCAACAACTTTCTAGAACTGTTTCCAAAAACCCTAAACCCTCTTCTCTAGCCGCGCTATAAATACCCATTCCTCATTTCATTTCTTCCCCTCCAATTTCTCCTCTCTACATATCTCCCTCCATTCTTCAGACTCCCGCAATGGCTTCCAGGTTGATTCTCAAGGACGCCAAATTAGCACTCCGATTCCTTATTCTTCGCAATCCAGCCTCATCCGCTCCCTCAGCACAAACCATCCAGAATCTTCTTCTTCCAATACTTCCAAGGCAATCTGCATCTGGATTACTCGGTGGCGTTTGTTCGAGCGACCGGCCGCTACTGTCTAGGGATTTAAATTCTAGTTTTGATGGCGGACTTAGGATCGAGGTTAGAGGGAAGCGGGAGCCGGAGATTGAGGAGACAGATGAGTTCGGCGAGAACGAAAGCGAGAGCGATCTCGAGTTCTCCGATGACTTCAGTGGGGACGAATTTTCTGACAACGACGATGCAGAGCCTGAGGATGATGATAATTGATTGATCGATATGTCTACATATACTGCTGTTTGAATTTCAATTTTGGATTCATATCGTGTTGATAATTGATGATTTGGTTTCGATATATCCGTAGAATTGAAAGTGCTCGAGTGTTGACATCGATAAATCTGTGTTTTGATACCATTTTGGTCATGGATATTCATTTTTTTTAAGAAATTTTTAGTTCATTCCACTTTTGTTTAGTCC ATGGCTTCCAGGTTGATTCTCAAGGACGCCAAATTAGCACTCCGATTCCTTATTCTTCGCAATCCAGCCTCATCCGCTCCCTCAGCACAAACCATCCAGAATCTTCTTCTTCCAATACTTCCAAGGCAATCTGCATCTGGATTACTCGGTGGCGTTTGTTCGAGCGACCGGCCGCTACTGTCTAGGGATTTAAATTCTAGTTTTGATGGCGGACTTAGGATCGAGGTTAGAGGGAAGCGGGAGCCGGAGATTGAGGAGACAGATGAGTTCGGCGAGAACGAAAGCGAGAGCGATCTCGAGTTCTCCGATGACTTCAGTGGGGACGAATTTTCTGACAACGACGATGCAGAGCCTGAGGATGATGATAATTGA MASRLILKDAKLALRFLILRNPASSAPSAQTIQNLLLPILPRQSASGLLGGVCSSDRPLLSRDLNSSFDGGLRIEVRGKREPEIEETDEFGENESESDLEFSDDFSGDEFSDNDDAEPEDDDN Homology
BLAST of Clc11G19460 vs. NCBI nr
Match: XP_022976605.1 (uncharacterized protein LOC111476951 [Cucurbita maxima]) HSP 1 Score: 121.7 bits (304), Expect = 4.4e-24 Identity = 82/130 (63.08%), Postives = 96/130 (73.85%), Query Frame = 0
BLAST of Clc11G19460 vs. NCBI nr
Match: KAG6591964.1 (hypothetical protein SDJN03_14310, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 114.0 bits (284), Expect = 9.2e-22 Identity = 80/130 (61.54%), Postives = 91/130 (70.00%), Query Frame = 0
BLAST of Clc11G19460 vs. NCBI nr
Match: XP_022936831.1 (uncharacterized protein LOC111443300 [Cucurbita moschata]) HSP 1 Score: 110.5 bits (275), Expect = 1.0e-20 Identity = 79/130 (60.77%), Postives = 92/130 (70.77%), Query Frame = 0
BLAST of Clc11G19460 vs. NCBI nr
Match: KAA0064333.1 (hypothetical protein E6C27_scaffold255G00320 [Cucumis melo var. makuwa]) HSP 1 Score: 105.9 bits (263), Expect = 2.5e-19 Identity = 76/125 (60.80%), Postives = 86/125 (68.80%), Query Frame = 0
BLAST of Clc11G19460 vs. NCBI nr
Match: KAE8649846.1 (hypothetical protein Csa_012085 [Cucumis sativus]) HSP 1 Score: 103.6 bits (257), Expect = 1.2e-18 Identity = 75/123 (60.98%), Postives = 90/123 (73.17%), Query Frame = 0
BLAST of Clc11G19460 vs. ExPASy TrEMBL
Match: A0A6J1IJY0 (uncharacterized protein LOC111476951 OS=Cucurbita maxima OX=3661 GN=LOC111476951 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 2.1e-24 Identity = 82/130 (63.08%), Postives = 96/130 (73.85%), Query Frame = 0
BLAST of Clc11G19460 vs. ExPASy TrEMBL
Match: A0A6J1F8K5 (uncharacterized protein LOC111443300 OS=Cucurbita moschata OX=3662 GN=LOC111443300 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 4.9e-21 Identity = 79/130 (60.77%), Postives = 92/130 (70.77%), Query Frame = 0
BLAST of Clc11G19460 vs. ExPASy TrEMBL
Match: A0A5A7V875 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G00320 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 1.2e-19 Identity = 76/125 (60.80%), Postives = 86/125 (68.80%), Query Frame = 0
BLAST of Clc11G19460 vs. ExPASy TrEMBL
Match: A0A0A0L3F1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G637720 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 2.0e-06 Identity = 38/44 (86.36%), Postives = 38/44 (86.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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