
Clc11G19330 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAGTGGTTATGTATTTCACAATATCCAATAATATTGTAACTGCAACATCCTAAATTAAGAGTTTTGGAAGTATTGATATAATCTTTAATTTCCCCCATGTTGTCTACACCACACAACTTTTCCCTTCATCTTTTGGCCAAACACCTTGAAATAGCCAATCCCTCCTCTCCCCTAACCTTTAAAACACAACAAACCCTTCTCCCCATTCTCACCAACCCCTTGTGTAAATTTCAATTTCCCATTGGCAAATCAACACACATCACACACGGAGCCCAAAAAACGGAGAAAAAAGAGGCAACGACGAAGACCATGACGACGATCGTGAACTCAGCTAAAGTACCAACAACATCGAGAAAGGTCATGATCGTCTCCATGACAACGATCGTCGTTGCTACCGTTAGCATTGTCGTGGTCTTGCTTCCAATGGGTGCAGAAGCGCTTATCCCAACCGTCGGTCCAATCGCTCAATGTATCCAAGGGTGCACAAAGTCGCTGTCAAGTTTAACTCCTGGTTATTGCTCGAGTATTTGTGGAGCTGAGTATAGGCCTCTAACAACAAGACATAGAGAGACTTCTGCCCCTCATCATCATCATCATCATGATCATAACCATGTTGATAAGCATCATATTATTGCTGATGTTATCATACCAAGTTAGAGTGTGTGTTGTGTGTCTTTTTTTTCATTTCCCACTATTATATTATTATTGTTAATAGTGGGATTAATTCATCATATTTGCAGCCATTTGATTTGCTTCTTTTTCTTGTAAGCACCTTCAAAAACCCATTTGCTTTTTTCTTTTTATCACTGTTGTTTTCACTTGATTTGATTTCAAACAAATTCAAAATTGTTCAAATAAGATTATTCTTCTCTCAAGATTATATTAGAGCAACAAGAGAAAAAAATTATCATGTTTTTCTTCCTAGGTAAGGAGAAAA AAAAAAGTGGTTATGTATTTCACAATATCCAATAATATTGTAACTGCAACATCCTAAATTAAGAGTTTTGGAAGTATTGATATAATCTTTAATTTCCCCCATGTTGTCTACACCACACAACTTTTCCCTTCATCTTTTGGCCAAACACCTTGAAATAGCCAATCCCTCCTCTCCCCTAACCTTTAAAACACAACAAACCCTTCTCCCCATTCTCACCAACCCCTTGTGTAAATTTCAATTTCCCATTGGCAAATCAACACACATCACACACGGAGCCCAAAAAACGGAGAAAAAAGAGGCAACGACGAAGACCATGACGACGATCGTGAACTCAGCTAAAGTACCAACAACATCGAGAAAGGTCATGATCGTCTCCATGACAACGATCGTCGTTGCTACCGTTAGCATTGTCGTGGTCTTGCTTCCAATGGGTGCAGAAGCGCTTATCCCAACCGTCGGTCCAATCGCTCAATGTATCCAAGGGTGCACAAAGTCGCTGTCAAGTTTAACTCCTGGTTATTGCTCGAGTATTTGTGGAGCTGAGTATAGGCCTCTAACAACAAGACATAGAGAGACTTCTGCCCCTCATCATCATCATCATCATGATCATAACCATGTTGATAAGCATCATATTATTGCTGATGTTATCATACCAAGTTAGAGTGTGTGTTGTGTGTCTTTTTTTTCATTTCCCACTATTATATTATTATTGTTAATAGTGGGATTAATTCATCATATTTGCAGCCATTTGATTTGCTTCTTTTTCTTGTAAGCACCTTCAAAAACCCATTTGCTTTTTTCTTTTTATCACTGTTGTTTTCACTTGATTTGATTTCAAACAAATTCAAAATTGTTCAAATAAGATTATTCTTCTCTCAAGATTATATTAGAGCAACAAGAGAAAAAAATTATCATGTTTTTCTTCCTAGGTAAGGAGAAAA ATGTTGTCTACACCACACAACTTTTCCCTTCATCTTTTGGCCAAACACCTTGAAATAGCCAATCCCTCCTCTCCCCTAACCTTTAAAACACAACAAACCCTTCTCCCCATTCTCACCAACCCCTTGTGTAAATTTCAATTTCCCATTGGCAAATCAACACACATCACACACGGAGCCCAAAAAACGGAGAAAAAAGAGGCAACGACGAAGACCATGACGACGATCGTGAACTCAGCTAAAGTACCAACAACATCGAGAAAGGTCATGATCGTCTCCATGACAACGATCGTCGTTGCTACCGTTAGCATTGTCGTGGTCTTGCTTCCAATGGGTGCAGAAGCGCTTATCCCAACCGTCGGTCCAATCGCTCAATGTATCCAAGGGTGCACAAAGTCGCTGTCAAGTTTAACTCCTGGTTATTGCTCGAGTATTTGTGGAGCTGAGTATAGGCCTCTAACAACAAGACATAGAGAGACTTCTGCCCCTCATCATCATCATCATCATGATCATAACCATGTTGATAAGCATCATATTATTGCTGATGTTATCATACCAAGTTAG MLSTPHNFSLHLLAKHLEIANPSSPLTFKTQQTLLPILTNPLCKFQFPIGKSTHITHGAQKTEKKEATTKTMTTIVNSAKVPTTSRKVMIVSMTTIVVATVSIVVVLLPMGAEALIPTVGPIAQCIQGCTKSLSSLTPGYCSSICGAEYRPLTTRHRETSAPHHHHHHDHNHVDKHHIIADVIIPS Homology
BLAST of Clc11G19330 vs. NCBI nr
Match: KAE8649837.1 (hypothetical protein Csa_012364 [Cucumis sativus]) HSP 1 Score: 102.4 bits (254), Expect = 4.2e-18 Identity = 63/116 (54.31%), Postives = 78/116 (67.24%), Query Frame = 0
BLAST of Clc11G19330 vs. NCBI nr
Match: KAA0064320.1 (histidine-rich glycoprotein-like isoform X2 [Cucumis melo var. makuwa] >TYK20266.1 histidine-rich glycoprotein-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 101.3 bits (251), Expect = 9.3e-18 Identity = 56/86 (65.12%), Postives = 66/86 (76.74%), Query Frame = 0
BLAST of Clc11G19330 vs. NCBI nr
Match: KAG6591952.1 (hypothetical protein SDJN03_14298, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024824.1 hypothetical protein SDJN02_13643, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 77.8 bits (190), Expect = 1.1e-10 Identity = 55/110 (50.00%), Postives = 71/110 (64.55%), Query Frame = 0
BLAST of Clc11G19330 vs. NCBI nr
Match: KAG6607883.1 (hypothetical protein SDJN03_01225, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 65.1 bits (157), Expect = 7.4e-07 Identity = 38/81 (46.91%), Postives = 47/81 (58.02%), Query Frame = 0
BLAST of Clc11G19330 vs. ExPASy TrEMBL
Match: A0A5A7VAR8 (Histidine-rich glycoprotein-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G004060 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 4.5e-18 Identity = 56/86 (65.12%), Postives = 66/86 (76.74%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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