Clc11G18120 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc11G18120
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	CYSTM domain-containing protein
Location	ClcChr11: 28785701 .. 28787269 (+)
RNA-Seq Expression	Clc11G18120
Synteny	Clc11G18120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAGGAATTATTTCTGAATTTCCTTTTCTCTTCTCTCAAGACTTGAATTTTTAATTTTTATTTCATCTCTCTGATCTCTTGTAAACATGAGTTCCGCTCAGCCTGCAGGTGATCAATCGATTTTGATTTTATATTTGTAACTTATTTGAGATTAATTCTATGCGATTGAATTTATATATAATTTTGGATTTTTTTGGGGGGGTTTTGTGTAGGTGTTTATCCTCCACCCTCCACCGTGCCAACCTCTTATGCAGCCCCACCCCCGGCGGGGTATCCGATGAGAGACGGCGGAGATTTCTCTCAACAACCCGCCCCTGTTCCGGCTGAAACCAAGTCTAGAGGCGATGGCTTTTGGAAAGGCTGGTAATTACCAATTATCAATTATATTAATACTTTAAAATTCGAAATTAAACGTTATAAAGAAATTGAAAGAAAAAAAAAAAAAGATTCCTTTTTATATTTCTAAATATTGCCAAAATTTTAATATTTTATGATAGAAAATTTCTGTTCTTCCCAACCCAATCAAGAGAAGATTAGCATTTTTCTAAGAAATTTTTGTGAAGTAGTGGTATATAAATAATTAATTGTTTTTATTTCTTTTAATTAAAAAGAATTGTATCACCTCTGTCCTAATATCATTAGTGCACCTTCTCATGTATCTCATTTTCTTTCCTAATAATAGTGATAAAAATGATTTTTTTAAATATAGAAAAATAAACTAAAATATATATAAATGTAATAAAATTTTAATATCATAGATTTTGGTAGACCGCCATAAATTACTATTTGTGTTTATCAATGTTTATCGTAATATTTTACTATTATTTATAAATATTTTCAATCGTTTTATCATTTAAAATAATTTTAATAATAATTGATGATCTAAACAAATAGAAATCACATTCTTATTTTTAGTTTAGTACAGAATAATATTGAAAACGTTTGTAGAATATGAGTAATGGGAACTGTTATTAAATATTTAGGTAAACATTAAAAACGAGAAAGAAGTTTAACAAAGGAGTCTTAAAATTTTAATTTATATTTATATATAAAATTGAAATTTTGTGTTTGCAGTTGTGCTGCGTTGTGTTGCTGCTGTGTGTTGGATGCATGCTTCTAATCACTACAAGTTCAGACAACAAATTCTTAGAGATGATCGATATATCAGCAGACTCATTGTCATTTTAGTGTTTTAATTTTAACTTTTCCTCCTCTTTTTTTTTTTTTTTCTCTTTTTCTTTTTAGTTTTCTAATTTTGTGAATTTTTGGATTAATTATGTGATGATGTTGTTCTAATAAATTTGGTTGGACTTCTGTGATCATATCGCATATGTTTAATTTTTTAAAAAAATTAATTATAATTTTTCTTGTGCGGAGTAGTTGAGTTTGATTTGTTTAGATATCCTCGTGACACGTGGCGAGTTATTTTGCTAACACGTGTGCATGAAAGGAGATAACTGATAAGGATGAAAGAGAGAGTTTATTTATTTATTTGTATTTTGCTTACTTATTCAACTTGGTTACGCATATTATTATTCCCCTCTTTTATAATAAGTTTTTT

mRNA sequence

AAAAAAAAAAAGGAATTATTTCTGAATTTCCTTTTCTCTTCTCTCAAGACTTGAATTTTTAATTTTTATTTCATCTCTCTGATCTCTTGTAAACATGAGTTCCGCTCAGCCTGCAGGTGTTTATCCTCCACCCTCCACCGTGCCAACCTCTTATGCAGCCCCACCCCCGGCGGGGTATCCGATGAGAGACGGCGGAGATTTCTCTCAACAACCCGCCCCTGTTCCGGCTGAAACCAAGTCTAGAGGCGATGGCTTTTGGAAAGGCTGTTGTGCTGCGTTGTGTTGCTGCTGTGTGTTGGATGCATGCTTCTAATCACTACAAGTTCAGACAACAAATTCTTAGAGATGATCGATATATCAGCAGACTCATTGTCATTTTAGTGTTTTAATTTTAACTTTTCCTCCTCTTTTTTTTTTTTTTTCTCTTTTTCTTTTTAGTTTTCTAATTTTGTGAATTTTTGGATTAATTATGTGATGATGTTGTTCTAATAAATTTGGTTGGACTTCTGTGATCATATCGCATATGTTTAATTTTTTAAAAAAATTAATTATAATTTTTCTTGTGCGGAGTAGTTGAGTTTGATTTGTTTAGATATCCTCGTGACACGTGGCGAGTTATTTTGCTAACACGTGTGCATGAAAGGAGATAACTGATAAGGATGAAAGAGAGAGTTTATTTATTTATTTGTATTTTGCTTACTTATTCAACTTGGTTACGCATATTATTATTCCCCTCTTTTATAATAAGTTTTTT

Coding sequence (CDS)

ATGAGTTCCGCTCAGCCTGCAGGTGTTTATCCTCCACCCTCCACCGTGCCAACCTCTTATGCAGCCCCACCCCCGGCGGGGTATCCGATGAGAGACGGCGGAGATTTCTCTCAACAACCCGCCCCTGTTCCGGCTGAAACCAAGTCTAGAGGCGATGGCTTTTGGAAAGGCTGTTGTGCTGCGTTGTGTTGCTGCTGTGTGTTGGATGCATGCTTCTAA

Protein sequence

MSSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

Homology

[Close]

BLAST of Clc11G18120 vs. NCBI nr
Match: KAG6591814.1 (hypothetical protein SDJN03_14160, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024679.1 hypothetical protein SDJN02_13497 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 138.3 bits (347), Expect = 2.7e-29
Identity = 67/72 (93.06%), Postives = 68/72 (94.44%), Query Frame = 0


Query: 1  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCA 60
          MSS QPA VYPPPST+PTSYAAPPPAGYP RDGGDFS QPAPVPAETKSRGDGFWKGCCA
Sbjct: 1  MSSGQPAAVYPPPSTMPTSYAAPPPAGYPTRDGGDFS-QPAPVPAETKSRGDGFWKGCCA 60

Query: 61 ALCCCCVLDACF 73
          ALCCCCVLDACF
Sbjct: 61 ALCCCCVLDACF 71

[Close]

BLAST of Clc11G18120 vs. NCBI nr
Match: XP_022137938.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Momordica charantia])

HSP 1 Score: 134.8 bits (338), Expect = 2.9e-28
Identity = 65/72 (90.28%), Postives = 66/72 (91.67%), Query Frame = 0


Query: 1  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCA 60
          MSSAQPA VYPPPST P SYAAPPPAGYP RDGGDFS QP PVPAETKSRGDGFWKGCCA
Sbjct: 1  MSSAQPAAVYPPPSTAPASYAAPPPAGYPTRDGGDFS-QPPPVPAETKSRGDGFWKGCCA 60

Query: 61 ALCCCCVLDACF 73
          A+CCCCVLDACF
Sbjct: 61 AICCCCVLDACF 71

[Close]

BLAST of Clc11G18120 vs. NCBI nr
Match: XP_031739667.1 (cysteine-rich and transmembrane domain-containing protein WIH1-like [Cucumis sativus] >KGN54976.1 hypothetical protein Csa_012002 [Cucumis sativus])

HSP 1 Score: 124.8 bits (312), Expect = 3.0e-25
Identity = 65/74 (87.84%), Postives = 67/74 (90.54%), Query Frame = 0


Query: 1  MSSAQPAGV-YPPP-STVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGC 60
          MSSAQPAGV YPPP STVPTSY+APPPAGYP R+GGDFS    PVPAETKSRGDGFWKGC
Sbjct: 1  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFS---TPVPAETKSRGDGFWKGC 60

Query: 61 CAALCCCCVLDACF 73
          CAALCCCCVLDACF
Sbjct: 61 CAALCCCCVLDACF 71

[Close]

BLAST of Clc11G18120 vs. NCBI nr
Match: KAF3972548.1 (hypothetical protein CMV_003960 [Castanea mollissima])

HSP 1 Score: 115.9 bits (289), Expect = 1.4e-22
Identity = 55/72 (76.39%), Postives = 59/72 (81.94%), Query Frame = 0


Query: 1  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCA 60
          MSS++PA  YPPPST P  Y APPPAGYP +DG  +SQ P P P ETKSRGDGFWKGCCA
Sbjct: 1  MSSSEPAVAYPPPSTAPAYYVAPPPAGYPTKDGSGYSQNPPP-PVETKSRGDGFWKGCCA 60

Query: 61 ALCCCCVLDACF 73
          ALCCCCVLDACF
Sbjct: 61 ALCCCCVLDACF 71

[Close]

BLAST of Clc11G18120 vs. NCBI nr
Match: KAF3953656.1 (hypothetical protein CMV_020922 [Castanea mollissima])

HSP 1 Score: 114.4 bits (285), Expect = 4.1e-22
Identity = 54/72 (75.00%), Postives = 59/72 (81.94%), Query Frame = 0


Query: 1  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCA 60
          MSS++PA  YPPPST P  Y APPPAGYP +DG  +SQ P P P ETKSRG+GFWKGCCA
Sbjct: 1  MSSSEPAVAYPPPSTAPAYYVAPPPAGYPTKDGSGYSQNPPP-PVETKSRGEGFWKGCCA 60

Query: 61 ALCCCCVLDACF 73
          ALCCCCVLDACF
Sbjct: 61 ALCCCCVLDACF 71

[Close]

BLAST of Clc11G18120 vs. ExPASy Swiss-Prot
Match: Q8S8M0 (Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis thaliana OX=3702 GN=WIH2 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 1.8e-04
Identity = 30/76 (39.47%), Postives = 35/76 (46.05%), Query Frame = 0


Query: 6  PAGVYPPPSTVPTSYAAP--PPAGYPMRDGGD-------FSQQPAPVPAETKSRGDGFWK 65
          P   YPP    P  Y     PP GYP +             Q P P   + +    GF +
Sbjct: 23 PKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPQQGYPPPYAPQYPPPPQHQQQQSSPGFLE 82

Query: 66 GCCAALCCCCVLDACF 73
          GC AALCCCC+LDACF
Sbjct: 83 GCLAALCCCCLLDACF 98

[Close]

BLAST of Clc11G18120 vs. ExPASy TrEMBL
Match: A0A6J1CBQ4 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Momordica charantia OX=3673 GN=LOC111009227 PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.4e-28
Identity = 65/72 (90.28%), Postives = 66/72 (91.67%), Query Frame = 0


Query: 1  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCA 60
          MSSAQPA VYPPPST P SYAAPPPAGYP RDGGDFS QP PVPAETKSRGDGFWKGCCA
Sbjct: 1  MSSAQPAAVYPPPSTAPASYAAPPPAGYPTRDGGDFS-QPPPVPAETKSRGDGFWKGCCA 60

Query: 61 ALCCCCVLDACF 73
          A+CCCCVLDACF
Sbjct: 61 AICCCCVLDACF 71

[Close]

BLAST of Clc11G18120 vs. ExPASy TrEMBL
Match: A0A0A0L4C6 (CYSTM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G618410 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.5e-25
Identity = 65/74 (87.84%), Postives = 67/74 (90.54%), Query Frame = 0


Query: 1  MSSAQPAGV-YPPP-STVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGC 60
          MSSAQPAGV YPPP STVPTSY+APPPAGYP R+GGDFS    PVPAETKSRGDGFWKGC
Sbjct: 1  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFS---TPVPAETKSRGDGFWKGC 60

Query: 61 CAALCCCCVLDACF 73
          CAALCCCCVLDACF
Sbjct: 61 CAALCCCCVLDACF 71

[Close]

BLAST of Clc11G18120 vs. ExPASy TrEMBL
Match: A0A7N2R3F7 (CYSTM domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.2e-22
Identity = 55/72 (76.39%), Postives = 59/72 (81.94%), Query Frame = 0


Query: 1  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCA 60
          MSS++PA  YPPPSTVP  Y APPPAGYP +DG  + Q P P P ETKSRGDGFWKGCCA
Sbjct: 1  MSSSEPAVAYPPPSTVPAYYVAPPPAGYPTKDGSGYFQNPPP-PVETKSRGDGFWKGCCA 60

Query: 61 ALCCCCVLDACF 73
          ALCCCCVLDACF
Sbjct: 61 ALCCCCVLDACF 71

[Close]

BLAST of Clc11G18120 vs. ExPASy TrEMBL
Match: A0A7N2LG73 (CYSTM domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.5e-22
Identity = 54/72 (75.00%), Postives = 59/72 (81.94%), Query Frame = 0


Query: 1  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCA 60
          MSS++PA  YPPPST P  Y APPPAGYP +DG  +SQ P P P ETKSRGDGFWKGCCA
Sbjct: 1  MSSSEPAVAYPPPSTAPAYYVAPPPAGYPTKDGSGYSQNPPP-PVETKSRGDGFWKGCCA 60

Query: 61 ALCCCCVLDACF 73
          ALCCCCV+DACF
Sbjct: 61 ALCCCCVVDACF 71

[Close]

BLAST of Clc11G18120 vs. ExPASy TrEMBL
Match: A0A7N2LJ98 (CYSTM domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.3e-21
Identity = 53/72 (73.61%), Postives = 57/72 (79.17%), Query Frame = 0


Query: 1  MSSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCA 60
          MSS++PA  YPPPST PT Y A PPAGYP +DG  +SQ P P P ETKSRGDGFWKGCCA
Sbjct: 1  MSSSEPAVAYPPPSTAPTYYVAAPPAGYPTKDGSGYSQNPPP-PVETKSRGDGFWKGCCA 60

Query: 61 ALCCCCVLDACF 73
          ALCCCC LD CF
Sbjct: 61 ALCCCCALDVCF 71

[Close]

BLAST of Clc11G18120 vs. TAIR 10
Match: AT3G22240.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G22235.2); Has 177 Blast hits to 177 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 76.3 bits (186), Expect = 1.2e-14
Identity = 40/66 (60.61%), Postives = 43/66 (65.15%), Query Frame = 0


Query: 9  VYPPPSTVPTSYAAPPPAGYPMRDG--GDFSQQPAPVPAETKSRGDGFWKGCCAALCCCC 68
          V  P  T    Y +PPP GYP RD   GD    P     ETKS+GDGFWKGCCAA+CCCC
Sbjct: 11 VEKPSQTSSGPYTSPPPIGYPTRDAMVGD----PPAAAVETKSKGDGFWKGCCAAICCCC 70

Query: 69 VLDACF 73
          VLDACF
Sbjct: 71 VLDACF 72

[Close]

BLAST of Clc11G18120 vs. TAIR 10
Match: AT2G32210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32190.1); Has 214 Blast hits to 214 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 10; Plants - 203; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 70.9 bits (172), Expect = 4.9e-13
Identity = 38/71 (53.52%), Postives = 42/71 (59.15%), Query Frame = 0


Query: 2  SSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAA 61
          S  Q +G YP P      Y APPP GYP  D    +        ETKS+GDGF KGC AA
Sbjct: 5  SQNQSSGAYPTPPVSTGPYVAPPPLGYPTND----TSHATVATVETKSKGDGFLKGCLAA 64

Query: 62 LCCCCVLDACF 73
          +CCCCVLDACF
Sbjct: 65 MCCCCVLDACF 71

[Close]

BLAST of Clc11G18120 vs. TAIR 10
Match: AT2G32190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32210.1); Has 218 Blast hits to 218 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 16; Plants - 202; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 70.5 bits (171), Expect = 6.3e-13
Identity = 38/71 (53.52%), Postives = 41/71 (57.75%), Query Frame = 0


Query: 2  SSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAA 61
          S  Q +G YP P      Y  PPP GYP  D           P ETKS+GDGF KGC AA
Sbjct: 5  SQNQSSGAYPTPPVSTGPYMTPPPLGYPTSD----ISHATVAPVETKSKGDGFLKGCLAA 64

Query: 62 LCCCCVLDACF 73
          +CCCCVLDACF
Sbjct: 65 MCCCCVLDACF 71

[Close]

BLAST of Clc11G18120 vs. TAIR 10
Match: AT1G05340.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32210.1); Has 189 Blast hits to 189 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 21; Plants - 168; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 62.0 bits (149), Expect = 2.3e-10
Identity = 36/68 (52.94%), Postives = 41/68 (60.29%), Query Frame = 0


Query: 5  QPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRGDGFWKGCCAALCC 64
          Q AG  PPP  + T  + PPP GYP       S     V  ETKS+GDGF+KGC AA+CC
Sbjct: 8  QSAGANPPP-PMSTCTSPPPPIGYPTNQPSHGSVAQGKV--ETKSKGDGFFKGCLAAMCC 67

Query: 65 CCVLDACF 73
          CC LD CF
Sbjct: 68 CCALDICF 72

[Close]

BLAST of Clc11G18120 vs. TAIR 10
Match: AT2G32200.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32210.1); Has 131 Blast hits to 131 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 1; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.4 bits (137), Expect = 5.6e-09
Identity = 36/73 (49.32%), Postives = 39/73 (53.42%), Query Frame = 0


Query: 2  SSAQPAGVYPPPSTVPTSYAAPPPAGYPMRDGGDFSQQPAPVPAETKSRG---DGFWKGC 61
          S  Q AG YP P      Y APPP GYP  D    +      P ETKS+G   DGF KGC
Sbjct: 5  SQNQYAGAYPTPPVSTGPYVAPPPLGYPTND----TTHATVAPVETKSKGEAADGFLKGC 64

Query: 62 CAALCCCCVLDAC 72
           A +  CCVLDAC
Sbjct: 65 LATMLACCVLDAC 73

The following BLAST results are available for this feature:

BLAST of Clc11G18120 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6591814.1	2.7e-29	93.06	hypothetical protein SDJN03_14160, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022137938.1	2.9e-28	90.28	cysteine-rich and transmembrane domain-containing protein WIH2-like [Momordica c...	[more]
XP_031739667.1	3.0e-25	87.84	cysteine-rich and transmembrane domain-containing protein WIH1-like [Cucumis sat...	[more]
KAF3972548.1	1.4e-22	76.39	hypothetical protein CMV_003960 [Castanea mollissima]	[more]
KAF3953656.1	4.1e-22	75.00	hypothetical protein CMV_020922 [Castanea mollissima]	[more]

BLAST of Clc11G18120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8M0	1.8e-04	39.47	Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis th...	[more]

BLAST of Clc11G18120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CBQ4	1.4e-28	90.28	cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Momordica...	[more]
A0A0A0L4C6	1.5e-25	87.84	CYSTM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G618410 PE=3 ...	[more]
A0A7N2R3F7	1.2e-22	76.39	CYSTM domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1	[more]
A0A7N2LG73	1.5e-22	75.00	CYSTM domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1	[more]
A0A7N2LJ98	1.3e-21	73.61	CYSTM domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1	[more]

BLAST of Clc11G18120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22240.1	1.2e-14	60.61	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G32210.1	4.9e-13	53.52	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G32190.1	6.3e-13	53.52	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G05340.1	2.3e-10	52.94	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G32200.1	5.6e-09	49.32	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028144	Cysteine-rich transmembrane CYSTM domain	PFAM	PF12734	CYSTM	coord: 23..72 e-value: 1.3E-10 score: 41.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..24
None	No IPR available	PANTHER	PTHR31568:SF60	CYSTEINE-RICH/TRANSMEMBRANE DOMAIN A-LIKE PROTEIN	coord: 4..72
IPR044850	Cysteine-rich and transmembrane domain-containing protein WIH1/2-like	PANTHER	PTHR31568	RCG49325, ISOFORM CRA_A	coord: 4..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc11G18120.1	Clc11G18120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane