Clc11G16840 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc11G16840
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Transmembrane protein
Location	ClcChr11: 27640116 .. 27642618 (-)
RNA-Seq Expression	Clc11G16840
Synteny	Clc11G16840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAGTTCTCAACTCGCCATAGATGGGAAACAAAGGGGCCGGGGCCATCCATACTCCACAGCAACCCATTTTAGGGCTCAGGATTCCAGCGGGAACCATAAAATCCACCGTTTCAGATCGTAATTCTGTAAGTTCTTCGCCGGAGAAGCCTCATCCCCAACGTCAACCACTGTTTCGGTGTGTGAATTTTTCTTATCTTTTCTCCATTTTCCTTCTCATTCTCGCTTCACTTCCTCTTTGTCTGCGACAAATTTAATTTTGATTTCTTCGGTTTTTCTGCAAATAGGAGTGATTATCTTGCATTGTGTTGTTAATTATAATTGCCCATCAAATTTGATCATCGAGAATTTGATGACAATTATGGAGTTGCGAGTTGAGGAATGACTAATGAGTGCAAATAGAAATGTAGGTTTTAGAGTCCTCGCTCCTGATTTTTTATTGAGGATGGAAGTCTAATCTAGAACTGCTAATTTCGAAGTTAGGGTAGTCTGATTGTTCTTTTCATGGATAGCTCTTTCTCATGGTATACTCTTGATACTCAGATTGTTGAATGTTGTACACTAACACATTCTCTTTCTCAGCTAATATTGGAGTTGAATTTTGCTGCTGTTTCTCATTAGTAATTGAGTTCATTTAATTGAGGAAGAGACATGGGAAGCCAAGAAAATGTTAAGCATATTGAGGAGTGCTCAGTTTCAAAGTAAGCTCTCTCTTTCTACCTGTTCTATTTGAAGTTTCACTTTCCCTTTTCTTTTTATACTGCTATCATCTCTCTTTCTATCTCTGATGTGTTTTCTCCTTTCCTAATTCTCGATAACTGGAATGTATACTAGCAGATGAAAATTCCTCTAGAATCTTCTCTTATAATATTACACCATCTTGTTGTGCAAATCTCATATTGCTTAGCATAAAATTTGGGCAGTTTTCTCCGAAACCTAGGGATATGTATATGTTGCTAAATTATAAGATTAGCTTAACTTCCTCAAAGAGGGTATTCACTCCAAAACCTGATACTTTTACCTTATTCATCCTTGAATCCCATTACTTGTTTCGTGGATCGAATGGATGCAGAAATTTTGTTCAAAATGTTGTGTTGAATGTCTTGACTTTGTGGTATAGGCTAGCCTATAGCCATGGTTTAAATTTTGGTAAATATCAACTTAGTAGCTATTCTTAGGTAGTTTGGCTAAGATGACAAAAAGAATCTTATAAAGTTTTAAATGCTAGACTAGTCCATAGTCTGGCTCATTTTGGTTTGTATACTTTTAAAATGATGTTCATTGGCCTCTATATGTTCAAGATGTCTATTTTGATCTCTATACTTTAAAAAAGTGGTCATACTGGTCCCATCATTTTCATATTTATCTCATAGAATTATCTATTAAAATATTATGACACTTCGTTATTAAAGGTTTTCATTGGGTATAAAACTTATGTTAAAACTTTTCAAATAGGGATCAAAATGGTCGTTTTTTTTAAGTACAAGACCAACATAGACATTTCGAAAAGACAAATACTATGATGCATCCTAGTCTACATCTTTGTGCACCCCAATTCCTACTCAATTGTCCAATCATAATTTGCTATATGACAAACTCTTTTTACTTCTTTTTCATAATATTTTTGGTTTCTTTTGTGTCTGATTAAAGGGGGATGCACAAAGATGAGTGCATTTTGGGATATACCTACGTATTGCTCTTTTGAAAGTATATTGACTAAAATATTTTGGTTTCTTTAGTGTGTGATTAAAGTGGAACCCACAAAAATGGGTACATTTGGGATACACCCATGCATTACTCTTTTGAAAGTACATTGACTAAAATGATCCAAAACCGAAAATACGAGGAACAAAATGAACATTTTAAAAGTATAAGAATATGAACCAAAATCAAAAGTACACGGTTTTTTTTTTTTTTCCTCTCTTTTAACTGGATTTTTTCTTGAGATTTTATCATCATTTTACGTTTGCAGTGCGTTGGGCACTTGGGTATTCTCAGTAGCAGGAGCCTTGCTAGCGATTCCAGTGGGAATAAAGAGAAAGTCACTGGCACCCCTTGTATTTTTTGGCACCACTGGTACAATGCTTGACATTATAATGGGAATTAGTGCCTGTGAAAGAGAACATGCTGAGCGTCAAATGAAGCTATTAGAAGAAGCTCAAAACTCTGCATCAGAAGCTTCAATTAACGATTCCGAATCCCATTCTTGATATCATCCTTGCATGGTTGTATCACTCACTCGTCGTGCCAAACAACCTTTTCATCCTCAGCTGTGTTTGATGATGAATACCTTTTTGGCATGGCCCTTAGCTGGGATTGTTCAGCCTTCTTTCAAACCACAGGGACATTGCTTGAGTTGTGGTATTGCGCAATCAACTGCCTTGACTTTATTGATTTGCAATAAAATTGTACCTGTAACCATAATTCTCATGTGCATTATGCTTTTGTAGACAACTTTGGGAAAATAGTTTCGTTATCCCCCTTAATTAATTCACAGTTTCAGAA

mRNA sequence

GCAGTTCTCAACTCGCCATAGATGGGAAACAAAGGGGCCGGGGCCATCCATACTCCACAGCAACCCATTTTAGGGCTCAGGATTCCAGCGGGAACCATAAAATCCACCGTTTCAGATCGTAATTCTGTAAGTTCTTCGCCGGAGAAGCCTCATCCCCAACGTCAACCACTGTTTCGAGACATGGGAAGCCAAGAAAATGTTAAGCATATTGAGGAGTGCTCAGTTTCAAATGCGTTGGGCACTTGGGTATTCTCAGTAGCAGGAGCCTTGCTAGCGATTCCAGTGGGAATAAAGAGAAAGTCACTGGCACCCCTTGTATTTTTTGGCACCACTGGTACAATGCTTGACATTATAATGGGAATTAGTGCCTGTGAAAGAGAACATGCTGAGCGTCAAATGAAGCTATTAGAAGAAGCTCAAAACTCTGCATCAGAAGCTTCAATTAACGATTCCGAATCCCATTCTTGATATCATCCTTGCATGGTTGTATCACTCACTCGTCGTGCCAAACAACCTTTTCATCCTCAGCTGTGTTTGATGATGAATACCTTTTTGGCATGGCCCTTAGCTGGGATTGTTCAGCCTTCTTTCAAACCACAGGGACATTGCTTGAGTTGTGGTATTGCGCAATCAACTGCCTTGACTTTATTGATTTGCAATAAAATTGTACCTGTAACCATAATTCTCATGTGCATTATGCTTTTGTAGACAACTTTGGGAAAATAGTTTCGTTATCCCCCTTAATTAATTCACAGTTTCAGAA

Coding sequence (CDS)

ATGGGAAACAAAGGGGCCGGGGCCATCCATACTCCACAGCAACCCATTTTAGGGCTCAGGATTCCAGCGGGAACCATAAAATCCACCGTTTCAGATCGTAATTCTGTAAGTTCTTCGCCGGAGAAGCCTCATCCCCAACGTCAACCACTGTTTCGAGACATGGGAAGCCAAGAAAATGTTAAGCATATTGAGGAGTGCTCAGTTTCAAATGCGTTGGGCACTTGGGTATTCTCAGTAGCAGGAGCCTTGCTAGCGATTCCAGTGGGAATAAAGAGAAAGTCACTGGCACCCCTTGTATTTTTTGGCACCACTGGTACAATGCTTGACATTATAATGGGAATTAGTGCCTGTGAAAGAGAACATGCTGAGCGTCAAATGAAGCTATTAGAAGAAGCTCAAAACTCTGCATCAGAAGCTTCAATTAACGATTCCGAATCCCATTCTTGA

Protein sequence

MGNKGAGAIHTPQQPILGLRIPAGTIKSTVSDRNSVSSSPEKPHPQRQPLFRDMGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSASEASINDSESHS

Homology

[Close]

BLAST of Clc11G16840 vs. NCBI nr
Match: TYK19240.1 (putative transmembrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 184.1 bits (466), Expect = 8.7e-43
Identity = 103/146 (70.55%), Postives = 111/146 (76.03%), Query Frame = 0


Query: 3   NKGAGAIHTPQQPILGLRIPAGTIKSTVSDRNSVSSSPEKPHPQRQPLFRDMGSQENVKH 62
           N  A AI++PQQ ILGL +    IK T  DRNS+SSSPEK HP+RQ LF           
Sbjct: 16  NGVAEAINSPQQSILGLTVQTRLIKFTAPDRNSISSSPEKRHPRRQSLF----------- 75

Query: 63  IEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHA 122
                   ALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHA
Sbjct: 76  -------GALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHA 135

Query: 123 ERQMKLLEEAQNSASEASINDSESHS 149
           ERQMKLLEEAQNSA ++S+NDS SHS
Sbjct: 136 ERQMKLLEEAQNSAPQSSLNDSNSHS 143

[Close]

BLAST of Clc11G16840 vs. NCBI nr
Match: XP_038899123.1 (uncharacterized protein LOC120086511 [Benincasa hispida] >XP_038899124.1 uncharacterized protein LOC120086511 [Benincasa hispida] >XP_038899125.1 uncharacterized protein LOC120086511 [Benincasa hispida])

HSP 1 Score: 181.0 bits (458), Expect = 7.4e-42
Identity = 93/95 (97.89%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 54  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 113
           MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG
Sbjct: 1   MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60

Query: 114 ISACEREHAERQMKLLEEAQNSASEASINDSESHS 149
           ISACEREHAERQMKLLEEAQNSA+EAS+NDSESHS
Sbjct: 61  ISACEREHAERQMKLLEEAQNSAAEASLNDSESHS 95

[Close]

BLAST of Clc11G16840 vs. NCBI nr
Match: XP_008444129.1 (PREDICTED: uncharacterized protein LOC103487570 isoform X2 [Cucumis melo] >XP_016899848.1 PREDICTED: uncharacterized protein LOC103487570 isoform X2 [Cucumis melo])

HSP 1 Score: 174.9 bits (442), Expect = 5.3e-40
Identity = 89/95 (93.68%), Postives = 93/95 (97.89%), Query Frame = 0


Query: 54  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 113
           MGSQENVKHIE+CSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG
Sbjct: 1   MGSQENVKHIEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60

Query: 114 ISACEREHAERQMKLLEEAQNSASEASINDSESHS 149
           ISACEREHAERQMKLLEEAQNSA ++S+NDS SHS
Sbjct: 61  ISACEREHAERQMKLLEEAQNSAPQSSLNDSNSHS 95

[Close]

BLAST of Clc11G16840 vs. NCBI nr
Match: XP_004142617.1 (uncharacterized protein LOC101216487 [Cucumis sativus] >XP_031740505.1 uncharacterized protein LOC101216487 [Cucumis sativus] >XP_031740506.1 uncharacterized protein LOC101216487 [Cucumis sativus])

HSP 1 Score: 172.2 bits (435), Expect = 3.4e-39
Identity = 89/95 (93.68%), Postives = 92/95 (96.84%), Query Frame = 0


Query: 54  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 113
           MGSQENVKHIE+CSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG
Sbjct: 1   MGSQENVKHIEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60

Query: 114 ISACEREHAERQMKLLEEAQNSASEASINDSESHS 149
           ISACEREHAERQMKLLEEAQNSA+EA +NDS S S
Sbjct: 61  ISACEREHAERQMKLLEEAQNSATEAFLNDSNSDS 95

[Close]

BLAST of Clc11G16840 vs. NCBI nr
Match: XP_023525801.1 (uncharacterized protein LOC111789310 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 172.2 bits (435), Expect = 3.4e-39
Identity = 88/95 (92.63%), Postives = 92/95 (96.84%), Query Frame = 0


Query: 54  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 113
           MGSQENVKH+EECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG
Sbjct: 1   MGSQENVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60

Query: 114 ISACEREHAERQMKLLEEAQNSASEASINDSESHS 149
           ISACEREHAERQMKLLEEAQNSA E S+ +S+SHS
Sbjct: 61  ISACEREHAERQMKLLEEAQNSAPEPSVAESQSHS 95

[Close]

BLAST of Clc11G16840 vs. ExPASy TrEMBL
Match: A0A5D3D6Z5 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1493G00400 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 4.2e-43
Identity = 103/146 (70.55%), Postives = 111/146 (76.03%), Query Frame = 0


Query: 3   NKGAGAIHTPQQPILGLRIPAGTIKSTVSDRNSVSSSPEKPHPQRQPLFRDMGSQENVKH 62
           N  A AI++PQQ ILGL +    IK T  DRNS+SSSPEK HP+RQ LF           
Sbjct: 16  NGVAEAINSPQQSILGLTVQTRLIKFTAPDRNSISSSPEKRHPRRQSLF----------- 75

Query: 63  IEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHA 122
                   ALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHA
Sbjct: 76  -------GALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHA 135

Query: 123 ERQMKLLEEAQNSASEASINDSESHS 149
           ERQMKLLEEAQNSA ++S+NDS SHS
Sbjct: 136 ERQMKLLEEAQNSAPQSSLNDSNSHS 143

[Close]

BLAST of Clc11G16840 vs. ExPASy TrEMBL
Match: A0A1S3B9M1 (uncharacterized protein LOC103487570 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487570 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 2.6e-40
Identity = 89/95 (93.68%), Postives = 93/95 (97.89%), Query Frame = 0


Query: 54  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 113
           MGSQENVKHIE+CSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG
Sbjct: 1   MGSQENVKHIEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60

Query: 114 ISACEREHAERQMKLLEEAQNSASEASINDSESHS 149
           ISACEREHAERQMKLLEEAQNSA ++S+NDS SHS
Sbjct: 61  ISACEREHAERQMKLLEEAQNSAPQSSLNDSNSHS 95

[Close]

BLAST of Clc11G16840 vs. ExPASy TrEMBL
Match: A0A0A0L1X1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G371820 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.7e-39
Identity = 89/95 (93.68%), Postives = 92/95 (96.84%), Query Frame = 0


Query: 54  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 113
           MGSQENVKHIE+CSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG
Sbjct: 1   MGSQENVKHIEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60

Query: 114 ISACEREHAERQMKLLEEAQNSASEASINDSESHS 149
           ISACEREHAERQMKLLEEAQNSA+EA +NDS S S
Sbjct: 61  ISACEREHAERQMKLLEEAQNSATEAFLNDSNSDS 95

[Close]

BLAST of Clc11G16840 vs. ExPASy TrEMBL
Match: A0A6J1FMK1 (uncharacterized protein LOC111446769 OS=Cucurbita moschata OX=3662 GN=LOC111446769 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.4e-38
Identity = 87/95 (91.58%), Postives = 90/95 (94.74%), Query Frame = 0


Query: 54  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 113
           MGSQE VKH+EECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG
Sbjct: 1   MGSQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60

Query: 114 ISACEREHAERQMKLLEEAQNSASEASINDSESHS 149
           ISACEREHAERQMKLLEEAQNSA E S+ +S SHS
Sbjct: 61  ISACEREHAERQMKLLEEAQNSAPEPSVAESHSHS 95

[Close]

BLAST of Clc11G16840 vs. ExPASy TrEMBL
Match: A0A6J1C9Z5 (uncharacterized protein LOC111009737 OS=Momordica charantia OX=3673 GN=LOC111009737 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 2.4e-38
Identity = 88/95 (92.63%), Postives = 92/95 (96.84%), Query Frame = 0


Query: 54  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 113
           MGS ENVKH+EECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG
Sbjct: 1   MGSHENVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60

Query: 114 ISACEREHAERQMKLLEEAQNSASEASINDSESHS 149
           ISACEREHAERQMKLL EAQNSA++AS+ DSESHS
Sbjct: 61  ISACEREHAERQMKLL-EAQNSAADASVADSESHS 94

[Close]

BLAST of Clc11G16840 vs. TAIR 10
Match: AT1G21930.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G42150.3); Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 145.6 bits (366), Expect = 3.2e-35
Identity = 71/95 (74.74%), Postives = 84/95 (88.42%), Query Frame = 0


Query: 54  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 113
           MGSQENVKH+EEC+VSNALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G
Sbjct: 1   MGSQENVKHLEECTVSNALGTWVFSVLGALVAIPVGIKRKSLGPLVFFGTTGTMLDIIIG 60

Query: 114 ISACEREHAERQMKLLEEAQNSASEASINDSESHS 149
           +S CEREHAE QMKLL+++QN+ +  +  ++E  S
Sbjct: 61  VSQCEREHAEHQMKLLQDSQNATTTTTNTETEESS 95

[Close]

BLAST of Clc11G16840 vs. TAIR 10
Match: AT3G42150.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21930.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 141.7 bits (356), Expect = 4.6e-34
Identity = 68/93 (73.12%), Postives = 83/93 (89.25%), Query Frame = 0


Query: 54  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 113
           MGSQ+NVKH+EEC+VSNALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G
Sbjct: 1   MGSQKNVKHLEECTVSNALGTWVFSVLGALVAIPVGIKRKSLGPLVFFGTTGTMLDIIIG 60

Query: 114 ISACEREHAERQMKLLEEAQNSASEASINDSES 147
           +S CEREHAE Q KLL+++QN+ +  +  ++E+
Sbjct: 61  VSQCEREHAEHQTKLLQDSQNATTTTTTTNTET 93

[Close]

BLAST of Clc11G16840 vs. TAIR 10
Match: AT3G42150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21930.1); Has 42 Blast hits to 42 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 141.7 bits (356), Expect = 4.6e-34
Identity = 68/93 (73.12%), Postives = 83/93 (89.25%), Query Frame = 0


Query: 54  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 113
           MGSQ+NVKH+EEC+VSNALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G
Sbjct: 1   MGSQKNVKHLEECTVSNALGTWVFSVLGALVAIPVGIKRKSLGPLVFFGTTGTMLDIIIG 60

Query: 114 ISACEREHAERQMKLLEEAQNSASEASINDSES 147
           +S CEREHAE Q KLL+++QN+ +  +  ++E+
Sbjct: 61  VSQCEREHAEHQTKLLQDSQNATTTTTTTNTET 93

[Close]

BLAST of Clc11G16840 vs. TAIR 10
Match: AT3G42150.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21930.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 141.7 bits (356), Expect = 4.6e-34
Identity = 68/93 (73.12%), Postives = 83/93 (89.25%), Query Frame = 0


Query: 54  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 113
           MGSQ+NVKH+EEC+VSNALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G
Sbjct: 1   MGSQKNVKHLEECTVSNALGTWVFSVLGALVAIPVGIKRKSLGPLVFFGTTGTMLDIIIG 60

Query: 114 ISACEREHAERQMKLLEEAQNSASEASINDSES 147
           +S CEREHAE Q KLL+++QN+ +  +  ++E+
Sbjct: 61  VSQCEREHAEHQTKLLQDSQNATTTTTTTNTET 93

The following BLAST results are available for this feature:

BLAST of Clc11G16840 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK19240.1	8.7e-43	70.55	putative transmembrane protein [Cucumis melo var. makuwa]	[more]
XP_038899123.1	7.4e-42	97.89	uncharacterized protein LOC120086511 [Benincasa hispida] >XP_038899124.1 unchara...	[more]
XP_008444129.1	5.3e-40	93.68	PREDICTED: uncharacterized protein LOC103487570 isoform X2 [Cucumis melo] >XP_01...	[more]
XP_004142617.1	3.4e-39	93.68	uncharacterized protein LOC101216487 [Cucumis sativus] >XP_031740505.1 uncharact...	[more]
XP_023525801.1	3.4e-39	92.63	uncharacterized protein LOC111789310 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc11G16840 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc11G16840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D6Z5	4.2e-43	70.55	Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3B9M1	2.6e-40	93.68	uncharacterized protein LOC103487570 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0L1X1	1.7e-39	93.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G371820 PE=4 SV=1	[more]
A0A6J1FMK1	1.4e-38	91.58	uncharacterized protein LOC111446769 OS=Cucurbita moschata OX=3662 GN=LOC1114467...	[more]
A0A6J1C9Z5	2.4e-38	92.63	uncharacterized protein LOC111009737 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]

BLAST of Clc11G16840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21930.1	3.2e-35	74.74	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G42150.2	4.6e-34	73.12	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G42150.1	4.6e-34	73.12	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G42150.3	4.6e-34	73.12	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 119..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..44
None	No IPR available	PANTHER	PTHR35691:SF1	EXPRESSED PROTEIN	coord: 54..144
None	No IPR available	PANTHER	PTHR35691	EXPRESSED PROTEIN	coord: 54..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc11G16840.2	Clc11G16840.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane