Clc11G16240 (gene) Watermelon (cordophanus) v2

Overview
NameClc11G16240
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionFAD-binding Berberine family protein
LocationClcChr11: 27163519 .. 27164054 (+)
RNA-Seq ExpressionClc11G16240
SyntenyClc11G16240
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAAACGATCAAACTTGGAGGTAGAAAAGTTCTAGTGAAGCCGTCGAACTTGGAGATAGAGAAGCTGCAACAAAGCCATCGAACTTGAAGATGAAAAAGTTGCGACGAAACTATCGAACTTGAAGACGGAGAAATAGTAGCACAACGCTCAAACTTGGAGATGGAGAAGTTGCAGCAAAGCCATCAAACTTGAAGATAAAGAACCTGTAGCGCAACCATCAATCTGGGAGATGAGAAACAACAACAAAGTCATTGAATCTTGAAGATGGAGAAAATGCATCGAGGATCACCAAGAAGAGCAAAACTCTTGGATTTTCAACAAGCGATTACCCGATTGTTGGCGTTGGAGGACACTTGAGCGGCGTCGACCACAGTGAGTTGTTTAGAAAATATGATATTGTTGTTGATCATCTGATTGATGCCGATGCAAATGGGAAGCTTTTGGATAGAAATAAATGGGGGAGGATTTGTTTTGGGTCGCTAGAGGTGGAGGAGGAGGAAGCTTTGGGATGGCTATGGCATGGAAGATAA

mRNA sequence

ATGGAGAAAACGATCAAACTTGGAGATGGAGAAAATGCATCGAGGATCACCAAGAAGAGCAAAACTCTTGGATTTTCAACAAGCGATTACCCGATTGTTGGCGTTGGAGGACACTTGAGCGGCGTCGACCACAGTGAGTTGTTTAGAAAATATGATATTGTTGTTGATCATCTGATTGATGCCGATGCAAATGGGAAGCTTTTGGATAGAAATAAATGGGGGAGGATTTGTTTTGGGTCGCTAGAGGTGGAGGAGGAGGAAGCTTTGGGATGGCTATGGCATGGAAGATAA

Coding sequence (CDS)

ATGGAGAAAACGATCAAACTTGGAGATGGAGAAAATGCATCGAGGATCACCAAGAAGAGCAAAACTCTTGGATTTTCAACAAGCGATTACCCGATTGTTGGCGTTGGAGGACACTTGAGCGGCGTCGACCACAGTGAGTTGTTTAGAAAATATGATATTGTTGTTGATCATCTGATTGATGCCGATGCAAATGGGAAGCTTTTGGATAGAAATAAATGGGGGAGGATTTGTTTTGGGTCGCTAGAGGTGGAGGAGGAGGAAGCTTTGGGATGGCTATGGCATGGAAGATAA

Protein sequence

MEKTIKLGDGENASRITKKSKTLGFSTSDYPIVGVGGHLSGVDHSELFRKYDIVVDHLIDADANGKLLDRNKWGRICFGSLEVEEEEALGWLWHGR
Homology
BLAST of Clc11G16240 vs. NCBI nr
Match: PQM42240.1 (tetrahydrocannabinolic acid synthase-like [Prunus yedoensis var. nudiflora])

HSP 1 Score: 80.1 bits (196), Expect = 1.1e-11
Identity = 39/89 (43.82%), Postives = 51/89 (57.30%), Query Frame = 0

Query: 10  GENASRITKKSKTLGFSTSDYPIVGVGGHLSGVDHSELFRKYDIVVDHLIDA---DANGK 69
           GE   RI +KSK  GF     P +GVGGH+SG     LFRKY +  D+++DA   D NG+
Sbjct: 152 GELYYRIAEKSKAYGFPAGSCPTIGVGGHISGGGFGTLFRKYGLAADNVLDAKIVDVNGR 211

Query: 70  LLDRNKWGRICFGSLEVEEEEALGWLWHG 96
           +LDR   G   F ++   E +AL   WHG
Sbjct: 212 ILDRKSMGEELFWAIRGGEAQALESFWHG 240

BLAST of Clc11G16240 vs. NCBI nr
Match: XP_038894066.1 (berberine bridge enzyme-like 18 [Benincasa hispida])

HSP 1 Score: 77.8 bits (190), Expect = 5.7e-11
Identity = 39/75 (52.00%), Postives = 46/75 (61.33%), Query Frame = 0

Query: 10  GENASRITKKSKTLGFSTSDYPIVGVGGHLSGVDHSELFRKYDIVVDHLIDA---DANGK 69
           GE   RI KKS+TL F     P VG+GGHLSG  H  L RKY +  DH++DA   DANGK
Sbjct: 156 GELHYRIAKKSQTLAFPAGGCPTVGIGGHLSGGGHGGLLRKYGLAADHVVDALLVDANGK 215

Query: 70  LLDRNKWGRICFGSL 82
           LLDR   G   F ++
Sbjct: 216 LLDRKSMGEDLFWAI 230

BLAST of Clc11G16240 vs. NCBI nr
Match: XP_024196731.1 (berberine bridge enzyme-like 21 [Rosa chinensis] >XP_040375073.1 berberine bridge enzyme-like 21 [Rosa chinensis])

HSP 1 Score: 75.1 bits (183), Expect = 3.7e-10
Identity = 38/75 (50.67%), Postives = 49/75 (65.33%), Query Frame = 0

Query: 10  GENASRITKKSKTLGFSTSDYPIVGVGGHLSGVDHSELFRKYDIVVDHLIDA---DANGK 69
           GE   RI++KSKTLGF+    P VGVGGH+SG  +  L RKY + VD+++DA   D NGK
Sbjct: 154 GELYYRISEKSKTLGFAAGICPTVGVGGHISGGGYGNLLRKYGLAVDNVLDALIVDVNGK 213

Query: 70  LLDRNKWGRICFGSL 82
           LLDR   G   F ++
Sbjct: 214 LLDRKAMGEDLFWAI 228

BLAST of Clc11G16240 vs. NCBI nr
Match: PRQ39980.1 (putative tetrahydroberberine oxidase [Rosa chinensis])

HSP 1 Score: 75.1 bits (183), Expect = 3.7e-10
Identity = 38/75 (50.67%), Postives = 49/75 (65.33%), Query Frame = 0

Query: 10  GENASRITKKSKTLGFSTSDYPIVGVGGHLSGVDHSELFRKYDIVVDHLIDA---DANGK 69
           GE   RI++KSKTLGF+    P VGVGGH+SG  +  L RKY + VD+++DA   D NGK
Sbjct: 154 GELYYRISEKSKTLGFAAGICPTVGVGGHISGGGYGNLLRKYGLAVDNVLDALIVDVNGK 213

Query: 70  LLDRNKWGRICFGSL 82
           LLDR   G   F ++
Sbjct: 214 LLDRKAMGEDLFWAI 228

BLAST of Clc11G16240 vs. NCBI nr
Match: KAF3632507.1 (putative serine/threonine-protein phosphatase 7 long form -like protein [Capsicum annuum])

HSP 1 Score: 73.9 bits (180), Expect = 8.2e-10
Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 0

Query: 10  GENASRITKKSKTLGFSTSDYPIVGVGGHLSGVDHSELFRKYDIVVDHLIDA---DANGK 69
           GE   RI++KSKTLGF     P VGVGGH SG  +  L RKY +  D+++DA   DANG+
Sbjct: 148 GELYYRISEKSKTLGFPAGVCPTVGVGGHFSGGGYGTLLRKYGLSADNIVDARLIDANGR 207

Query: 70  LLDRNKWGRICFGSL 82
           +LDRN  G   F ++
Sbjct: 208 ILDRNSMGEDLFWAI 222

BLAST of Clc11G16240 vs. ExPASy Swiss-Prot
Match: Q9FKU9 (Berberine bridge enzyme-like 25 OS=Arabidopsis thaliana OX=3702 GN=At5g44390 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 5.9e-11
Identity = 34/75 (45.33%), Postives = 46/75 (61.33%), Query Frame = 0

Query: 10  GENASRITKKSKTLGFSTSDYPIVGVGGHLSGVDHSELFRKYDIVVDHLIDA---DANGK 69
           GE   RI +KSK  GF    YP +G+GGH++G  +  L RKY +  D+++DA   DANGK
Sbjct: 163 GELYYRIAEKSKFHGFPAGVYPSLGIGGHITGGAYGSLMRKYGLAADNVLDAKIVDANGK 222

Query: 70  LLDRNKWGRICFGSL 82
           LLDR   G   F ++
Sbjct: 223 LLDRASMGEDLFWAI 237

BLAST of Clc11G16240 vs. ExPASy Swiss-Prot
Match: Q9SVG3 (Berberine bridge enzyme-like 21 OS=Arabidopsis thaliana OX=3702 GN=At4g20840 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 3.8e-10
Identity = 34/75 (45.33%), Postives = 45/75 (60.00%), Query Frame = 0

Query: 10  GENASRITKKSKTLGFSTSDYPIVGVGGHLSGVDHSELFRKYDIVVDHLIDA---DANGK 69
           GE   RI +KSK  GF     P VGVGGH+SG  +  + RK+ + VD+LIDA   D NG+
Sbjct: 161 GEVYYRIWEKSKVHGFPAGVCPTVGVGGHISGGGYGNMLRKFGLSVDNLIDAKIVDVNGQ 220

Query: 70  LLDRNKWGRICFGSL 82
           +LDR   G   F ++
Sbjct: 221 ILDRKSMGEDLFWAI 235

BLAST of Clc11G16240 vs. ExPASy Swiss-Prot
Match: Q9FZC6 (Berberine bridge enzyme-like 5 OS=Arabidopsis thaliana OX=3702 GN=FOX3 PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 5.0e-10
Identity = 34/75 (45.33%), Postives = 44/75 (58.67%), Query Frame = 0

Query: 10  GENASRITKKSKTLGFSTSDYPIVGVGGHLSGVDHSELFRKYDIVVDHLIDAD---ANGK 69
           GE  ++I + S+TL F     P VGVGGH++G     L RK+ I VDH+IDA     NGK
Sbjct: 152 GELYTKINEASQTLAFPAGVCPTVGVGGHITGGGFGNLMRKFGITVDHVIDAQLIGVNGK 211

Query: 70  LLDRNKWGRICFGSL 82
           LLDR   G   F ++
Sbjct: 212 LLDRATMGEDLFWAI 226

BLAST of Clc11G16240 vs. ExPASy Swiss-Prot
Match: Q9FZC8 (Berberine bridge enzyme-like 7 OS=Arabidopsis thaliana OX=3702 GN=FOX5 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 6.5e-10
Identity = 34/75 (45.33%), Postives = 44/75 (58.67%), Query Frame = 0

Query: 10  GENASRITKKSKTLGFSTSDYPIVGVGGHLSGVDHSELFRKYDIVVDHLIDA---DANGK 69
           GE   +I + S+TL F     P VGVGGH+SG  +  L RK+ I VDH+ DA   D NGK
Sbjct: 152 GELYVKINEASQTLAFPAGVCPTVGVGGHISGGGYGNLMRKFGITVDHVSDAQLIDVNGK 211

Query: 70  LLDRNKWGRICFGSL 82
           LL+R   G   F ++
Sbjct: 212 LLNRASMGEDLFWAI 226

BLAST of Clc11G16240 vs. ExPASy Swiss-Prot
Match: Q9FZC7 (Berberine bridge enzyme-like 6 OS=Arabidopsis thaliana OX=3702 GN=FOX4 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.1e-09
Identity = 34/75 (45.33%), Postives = 43/75 (57.33%), Query Frame = 0

Query: 10  GENASRITKKSKTLGFSTSDYPIVGVGGHLSGVDHSELFRKYDIVVDHLIDA---DANGK 69
           GE   +I + S+TL F     P VG GGH+SG     L RK+ I VDH+IDA   D NGK
Sbjct: 176 GELYVKINEASQTLAFPAGVCPTVGAGGHISGGGFGNLMRKFGITVDHVIDAQIIDVNGK 235

Query: 70  LLDRNKWGRICFGSL 82
           LL+R   G   F ++
Sbjct: 236 LLNRAAMGEDLFWAI 250

BLAST of Clc11G16240 vs. ExPASy TrEMBL
Match: A0A314UXU1 (Tetrahydrocannabinolic acid synthase-like OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_27987 PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 5.5e-12
Identity = 39/89 (43.82%), Postives = 51/89 (57.30%), Query Frame = 0

Query: 10  GENASRITKKSKTLGFSTSDYPIVGVGGHLSGVDHSELFRKYDIVVDHLIDA---DANGK 69
           GE   RI +KSK  GF     P +GVGGH+SG     LFRKY +  D+++DA   D NG+
Sbjct: 152 GELYYRIAEKSKAYGFPAGSCPTIGVGGHISGGGFGTLFRKYGLAADNVLDAKIVDVNGR 211

Query: 70  LLDRNKWGRICFGSLEVEEEEALGWLWHG 96
           +LDR   G   F ++   E +AL   WHG
Sbjct: 212 ILDRKSMGEELFWAIRGGEAQALESFWHG 240

BLAST of Clc11G16240 vs. ExPASy TrEMBL
Match: A0A2P6R0M3 (Putative tetrahydroberberine oxidase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0431091 PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.8e-10
Identity = 38/75 (50.67%), Postives = 49/75 (65.33%), Query Frame = 0

Query: 10  GENASRITKKSKTLGFSTSDYPIVGVGGHLSGVDHSELFRKYDIVVDHLIDA---DANGK 69
           GE   RI++KSKTLGF+    P VGVGGH+SG  +  L RKY + VD+++DA   D NGK
Sbjct: 154 GELYYRISEKSKTLGFAAGICPTVGVGGHISGGGYGNLLRKYGLAVDNVLDALIVDVNGK 213

Query: 70  LLDRNKWGRICFGSL 82
           LLDR   G   F ++
Sbjct: 214 LLDRKAMGEDLFWAI 228

BLAST of Clc11G16240 vs. ExPASy TrEMBL
Match: A0A2G2WKB9 (Cannabidiolic acid synthase-like 2 OS=Capsicum baccatum OX=33114 GN=CQW23_14820 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 4.0e-10
Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 0

Query: 10  GENASRITKKSKTLGFSTSDYPIVGVGGHLSGVDHSELFRKYDIVVDHLIDA---DANGK 69
           GE   RI++KSKTLGF     P VGVGGH SG  +  L RKY +  D+++DA   DANG+
Sbjct: 563 GELYYRISEKSKTLGFPAGVCPTVGVGGHFSGGGYGTLLRKYGLSADNIVDARLIDANGR 622

Query: 70  LLDRNKWGRICFGSL 82
           +LDRN  G   F ++
Sbjct: 623 ILDRNSMGEDLFWAI 637

BLAST of Clc11G16240 vs. ExPASy TrEMBL
Match: A0A2G3C877 (Cannabidiolic acid synthase-like 1 OS=Capsicum chinense OX=80379 GN=BC332_16141 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 4.0e-10
Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 0

Query: 10  GENASRITKKSKTLGFSTSDYPIVGVGGHLSGVDHSELFRKYDIVVDHLIDA---DANGK 69
           GE   RI++KSKTLGF     P VGVGGH SG  +  L RKY +  D+++DA   DANG+
Sbjct: 563 GELYYRISEKSKTLGFPAGVCPTVGVGGHFSGGGYGTLLRKYGLSADNIVDARLIDANGR 622

Query: 70  LLDRNKWGRICFGSL 82
           +LDRN  G   F ++
Sbjct: 623 ILDRNSMGEDLFWAI 637

BLAST of Clc11G16240 vs. ExPASy TrEMBL
Match: A0A1U8FCB8 (cannabidiolic acid synthase-like OS=Capsicum annuum OX=4072 GN=LOC107855838 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 4.0e-10
Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 0

Query: 10  GENASRITKKSKTLGFSTSDYPIVGVGGHLSGVDHSELFRKYDIVVDHLIDA---DANGK 69
           GE   RI++KSKTLGF     P VGVGGH SG  +  L RKY +  D+++DA   DANG+
Sbjct: 148 GELYYRISEKSKTLGFPAGVCPTVGVGGHFSGGGYGTLLRKYGLSADNIVDARLIDANGR 207

Query: 70  LLDRNKWGRICFGSL 82
           +LDRN  G   F ++
Sbjct: 208 ILDRNSMGEDLFWAI 222

BLAST of Clc11G16240 vs. TAIR 10
Match: AT5G44390.1 (FAD-binding Berberine family protein )

HSP 1 Score: 68.2 bits (165), Expect = 4.2e-12
Identity = 34/75 (45.33%), Postives = 46/75 (61.33%), Query Frame = 0

Query: 10  GENASRITKKSKTLGFSTSDYPIVGVGGHLSGVDHSELFRKYDIVVDHLIDA---DANGK 69
           GE   RI +KSK  GF    YP +G+GGH++G  +  L RKY +  D+++DA   DANGK
Sbjct: 163 GELYYRIAEKSKFHGFPAGVYPSLGIGGHITGGAYGSLMRKYGLAADNVLDAKIVDANGK 222

Query: 70  LLDRNKWGRICFGSL 82
           LLDR   G   F ++
Sbjct: 223 LLDRASMGEDLFWAI 237

BLAST of Clc11G16240 vs. TAIR 10
Match: AT4G20840.1 (FAD-binding Berberine family protein )

HSP 1 Score: 65.5 bits (158), Expect = 2.7e-11
Identity = 34/75 (45.33%), Postives = 45/75 (60.00%), Query Frame = 0

Query: 10  GENASRITKKSKTLGFSTSDYPIVGVGGHLSGVDHSELFRKYDIVVDHLIDA---DANGK 69
           GE   RI +KSK  GF     P VGVGGH+SG  +  + RK+ + VD+LIDA   D NG+
Sbjct: 161 GEVYYRIWEKSKVHGFPAGVCPTVGVGGHISGGGYGNMLRKFGLSVDNLIDAKIVDVNGQ 220

Query: 70  LLDRNKWGRICFGSL 82
           +LDR   G   F ++
Sbjct: 221 ILDRKSMGEDLFWAI 235

BLAST of Clc11G16240 vs. TAIR 10
Match: AT1G26400.1 (FAD-binding Berberine family protein )

HSP 1 Score: 65.1 bits (157), Expect = 3.6e-11
Identity = 34/75 (45.33%), Postives = 44/75 (58.67%), Query Frame = 0

Query: 10  GENASRITKKSKTLGFSTSDYPIVGVGGHLSGVDHSELFRKYDIVVDHLIDAD---ANGK 69
           GE  ++I + S+TL F     P VGVGGH++G     L RK+ I VDH+IDA     NGK
Sbjct: 152 GELYTKINEASQTLAFPAGVCPTVGVGGHITGGGFGNLMRKFGITVDHVIDAQLIGVNGK 211

Query: 70  LLDRNKWGRICFGSL 82
           LLDR   G   F ++
Sbjct: 212 LLDRATMGEDLFWAI 226

BLAST of Clc11G16240 vs. TAIR 10
Match: AT1G26420.1 (FAD-binding Berberine family protein )

HSP 1 Score: 64.7 bits (156), Expect = 4.6e-11
Identity = 34/75 (45.33%), Postives = 44/75 (58.67%), Query Frame = 0

Query: 10  GENASRITKKSKTLGFSTSDYPIVGVGGHLSGVDHSELFRKYDIVVDHLIDA---DANGK 69
           GE   +I + S+TL F     P VGVGGH+SG  +  L RK+ I VDH+ DA   D NGK
Sbjct: 152 GELYVKINEASQTLAFPAGVCPTVGVGGHISGGGYGNLMRKFGITVDHVSDAQLIDVNGK 211

Query: 70  LLDRNKWGRICFGSL 82
           LL+R   G   F ++
Sbjct: 212 LLNRASMGEDLFWAI 226

BLAST of Clc11G16240 vs. TAIR 10
Match: AT1G26410.1 (FAD-binding Berberine family protein )

HSP 1 Score: 63.9 bits (154), Expect = 7.9e-11
Identity = 34/75 (45.33%), Postives = 43/75 (57.33%), Query Frame = 0

Query: 10  GENASRITKKSKTLGFSTSDYPIVGVGGHLSGVDHSELFRKYDIVVDHLIDA---DANGK 69
           GE   +I + S+TL F     P VG GGH+SG     L RK+ I VDH+IDA   D NGK
Sbjct: 176 GELYVKINEASQTLAFPAGVCPTVGAGGHISGGGFGNLMRKFGITVDHVIDAQIIDVNGK 235

Query: 70  LLDRNKWGRICFGSL 82
           LL+R   G   F ++
Sbjct: 236 LLNRAAMGEDLFWAI 250

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PQM42240.11.1e-1143.82tetrahydrocannabinolic acid synthase-like [Prunus yedoensis var. nudiflora][more]
XP_038894066.15.7e-1152.00berberine bridge enzyme-like 18 [Benincasa hispida][more]
XP_024196731.13.7e-1050.67berberine bridge enzyme-like 21 [Rosa chinensis] >XP_040375073.1 berberine bridg... [more]
PRQ39980.13.7e-1050.67putative tetrahydroberberine oxidase [Rosa chinensis][more]
KAF3632507.18.2e-1049.33putative serine/threonine-protein phosphatase 7 long form -like protein [Capsicu... [more]
Match NameE-valueIdentityDescription
Q9FKU95.9e-1145.33Berberine bridge enzyme-like 25 OS=Arabidopsis thaliana OX=3702 GN=At5g44390 PE=... [more]
Q9SVG33.8e-1045.33Berberine bridge enzyme-like 21 OS=Arabidopsis thaliana OX=3702 GN=At4g20840 PE=... [more]
Q9FZC65.0e-1045.33Berberine bridge enzyme-like 5 OS=Arabidopsis thaliana OX=3702 GN=FOX3 PE=3 SV=1[more]
Q9FZC86.5e-1045.33Berberine bridge enzyme-like 7 OS=Arabidopsis thaliana OX=3702 GN=FOX5 PE=3 SV=1[more]
Q9FZC71.1e-0945.33Berberine bridge enzyme-like 6 OS=Arabidopsis thaliana OX=3702 GN=FOX4 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A314UXU15.5e-1243.82Tetrahydrocannabinolic acid synthase-like OS=Prunus yedoensis var. nudiflora OX=... [more]
A0A2P6R0M31.8e-1050.67Putative tetrahydroberberine oxidase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4... [more]
A0A2G2WKB94.0e-1049.33Cannabidiolic acid synthase-like 2 OS=Capsicum baccatum OX=33114 GN=CQW23_14820 ... [more]
A0A2G3C8774.0e-1049.33Cannabidiolic acid synthase-like 1 OS=Capsicum chinense OX=80379 GN=BC332_16141 ... [more]
A0A1U8FCB84.0e-1049.33cannabidiolic acid synthase-like OS=Capsicum annuum OX=4072 GN=LOC107855838 PE=3... [more]
Match NameE-valueIdentityDescription
AT5G44390.14.2e-1245.33FAD-binding Berberine family protein [more]
AT4G20840.12.7e-1145.33FAD-binding Berberine family protein [more]
AT1G26400.13.6e-1145.33FAD-binding Berberine family protein [more]
AT1G26420.14.6e-1145.33FAD-binding Berberine family protein [more]
AT1G26410.17.9e-1145.33FAD-binding Berberine family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016169FAD-binding, type PCMH, subdomain 2GENE3D3.30.465.10coord: 10..72
e-value: 8.4E-10
score: 40.4
NoneNo IPR availablePANTHERPTHR32448OS08G0158400 PROTEINcoord: 11..76
NoneNo IPR availablePANTHERPTHR32448:SF25BERBERINE BRIDGE ENZYME-LIKE 8coord: 11..76

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc11G16240.1Clc11G16240.1mRNA