Clc11G15970 (gene) Watermelon (cordophanus) v2

Overview
NameClc11G15970
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
LocationClcChr11: 26908936 .. 26909196 (-)
RNA-Seq ExpressionClc11G15970
SyntenyClc11G15970
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGATTGGGCCTATTGGACCCTGTTTGGAGAAAAGCCCAACAAAACCAAGAGCCCAAATCGGTGTCAAAACAACGGCGATTCGCCGTCTTCCACTCTCCTGCTTGAATATTTGCTTAGTAAGCTTGAGAGAGAAGACAACGAAAATGAATTCCAAAAAACAATCAACGGAGGGACGTGAGGAACGGCGCCACCACACAACCGCTCCACCACCACCACCAACTGCTCCGGCAAGTTTGGTGAAGGCGATTGGCTCGTAG

mRNA sequence

ATGTTGATTGGGCCTATTGGACCCTGTTTGGAGAAAAGCCCAACAAAACCAAGAGCCCAAATCGGTGTCAAAACAACGGCGATTCGCCGTCTTCCACTCTCCTGCTTGAATATTTGCTTAGTAAGCTTGAGAGAGAAGACAACGAAAATGAATTCCAAAAAACAATCAACGGAGGGACGTGAGGAACGGCGCCACCACACAACCGCTCCACCACCACCACCAACTGCTCCGGCAAGTTTGGTGAAGGCGATTGGCTCGTAG

Coding sequence (CDS)

ATGTTGATTGGGCCTATTGGACCCTGTTTGGAGAAAAGCCCAACAAAACCAAGAGCCCAAATCGGTGTCAAAACAACGGCGATTCGCCGTCTTCCACTCTCCTGCTTGAATATTTGCTTAGTAAGCTTGAGAGAGAAGACAACGAAAATGAATTCCAAAAAACAATCAACGGAGGGACGTGAGGAACGGCGCCACCACACAACCGCTCCACCACCACCACCAACTGCTCCGGCAAGTTTGGTGAAGGCGATTGGCTCGTAG

Protein sequence

MLIGPIGPCLEKSPTKPRAQIGVKTTAIRRLPLSCLNICLVSLREKTTKMNSKKQSTEGREERRHHTTAPPPPPTAPASLVKAIGS
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..86

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc11G15970.1Clc11G15970.1mRNA