Clc11G14550 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc11G14550
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	WEB family protein At3g51220
Location	ClcChr11: 25436315 .. 25437865 (+)
RNA-Seq Expression	Clc11G14550
Synteny	Clc11G14550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCACTTTCCATCTTTAGTGTTAATGTCTATGAAATTAATTAAAAAAATTTAAAAGATTATAATTGATTATGTTTCACTATTTTTCATCACTATGAAATTTTAAAAATTAAATTTAAAATTTTATTTCATAATTATTTTAAATTAATTAATAGACATTAACGCCAATGACTTAAAGTGAGTTTTTGGTGAAAAATTGAGGTTAAAAGTTTAAATCGTAAAACATAGGGATCAAATTGAAACAAAACTCAAATCTCAAAGATAAAATTGTAACATTTTAAATAAAATGAGACTGAATTCAAAATTTAAGGATTAAATATATGAGATCTAGAAACTTAGAGACCAAATTGAAACTAAACTCACAACCTAGCTACCAAAAATATATCTTACCCTTCATATTATGTATAAGCTCCATCTCTCTCTTGGTTGGGCGGTCATTTTCGACCATCTTCCCCACACAATATGATAGGATCATTTTTGTCTTAACCTTGAAACAACAGCCATCCCTCTCTCTCTCTCACTTTACTTTTAAAGCTAAAGCAAAGAGCTCAATTCTTCCACCAAACCAATCGTCAAATATACCATATCTTCCCACACCCTCATACACATCCCAAACTTACTAACTCTCCAACCATGGAAGACCCTGAAATGCCTAATCAAAGTTCTGGCTGCACTGTCGACACCTCCCGCCCCTTCCGCTCCGTCAAAGAAGCCGTTGCCGTGTTCGGTGAACGGATTCTAGTCGGAGACTCGTACTCATCATCGCCGAAACCATGTGCTGACGTCCCATTGCCTGAAATAGGCACATGGGAATCATTGCCAAGCCCTACAACAACAGTAAAAGAAGAGAAAGAACATGTTTTGAATACCTTGAAGAAACTTGAGGCAGAGCTGGAAGAGACTAAGGAAGAGTTGAGGTTGCTGAAGGAGAGGGAAGAAGATACAGAAGTGGCATTGGCATCACTGAATGCAGAGCTGCATAAGAACATGTCGAAGTTGGCTGAGGCTGAGGCAGCGGCGGCCGCGGCAAAAGCTGCGGCGACGAGAAGAATTGCAATGGGATGTGAGAGTGGAAGAATAGAAGAAGAAATGAAGAGGTCAGAGTTGAAGATGAAGAGAATTGAGGAGACAGAGTCACCCACATTGGCTCAGATATTGAGCTTTGGAGACAAAATTGGGTATTTTGGAGGTAAAATGGAAAAGAAAAAGATAAAGAAAAAACCAATTATTCCACTGGTGGGAGATTTGTTGTTCATATTGAAGAAAAAAGGGTCTCCTGAGCTTGCTATTCGTTCATCTTTGAATTCCTTCAATTAAGAACCTTTTATTTGCCTTCTGCCTTTTTCTTCCTTGCATCCTTCTATATCCCATGTATATCTATGTTGTGGATTGTAATTTAGAGTTTGGGAGTGATTTGAAAATGGTGAAAATCACTTTTGTTATATTCAAAATTACTATAGTACGCCTTTAATAATTCAAATGCGTTGTTTGGTAATCATTTAATTTTTGGTCTTTTGTTTTTAAAAATTAATACTATAGACACTACTTTCAC

mRNA sequence

TCTCACTTTCCATCTTTAGTGTTAATGTCTATGAAATTAATTAAAAAAATTTAAAAGATTATAATTGATTATGTTTCACTATTTTTCATCACTATGAAATTTTAAAAATTAAATTTAAAATTTTATTTCATAATTATTTTAAATTAATTAATAGACATTAACGCCAATGACTTAAAGTGAGTTTTTGGTGAAAAATTGAGGTTAAAAGTTTAAATCGTAAAACATAGGGATCAAATTGAAACAAAACTCAAATCTCAAAGATAAAATTGTAACATTTTAAATAAAATGAGACTGAATTCAAAATTTAAGGATTAAATATATGAGATCTAGAAACTTAGAGACCAAATTGAAACTAAACTCACAACCTAGCTACCAAAAATATATCTTACCCTTCATATTATGTATAAGCTCCATCTCTCTCTTGGTTGGGCGGTCATTTTCGACCATCTTCCCCACACAATATGATAGGATCATTTTTGTCTTAACCTTGAAACAACAGCCATCCCTCTCTCTCTCTCACTTTACTTTTAAAGCTAAAGCAAAGAGCTCAATTCTTCCACCAAACCAATCGTCAAATATACCATATCTTCCCACACCCTCATACACATCCCAAACTTACTAACTCTCCAACCATGGAAGACCCTGAAATGCCTAATCAAAGTTCTGGCTGCACTGTCGACACCTCCCGCCCCTTCCGCTCCGTCAAAGAAGCCGTTGCCGTGTTCGGTGAACGGATTCTAGTCGGAGACTCGTACTCATCATCGCCGAAACCATGTGCTGACGTCCCATTGCCTGAAATAGGCACATGGGAATCATTGCCAAGCCCTACAACAACAGTAAAAGAAGAGAAAGAACATGTTTTGAATACCTTGAAGAAACTTGAGGCAGAGCTGGAAGAGACTAAGGAAGAGTTGAGGTTGCTGAAGGAGAGGGAAGAAGATACAGAAGTGGCATTGGCATCACTGAATGCAGAGCTGCATAAGAACATGTCGAAGTTGGCTGAGGCTGAGGCAGCGGCGGCCGCGGCAAAAGCTGCGGCGACGAGAAGAATTGCAATGGGATGTGAGAGTGGAAGAATAGAAGAAGAAATGAAGAGGTCAGAGTTGAAGATGAAGAGAATTGAGGAGACAGAGTCACCCACATTGGCTCAGATATTGAGCTTTGGAGACAAAATTGGGTATTTTGGAGGTAAAATGGAAAAGAAAAAGATAAAGAAAAAACCAATTATTCCACTGGTGGGAGATTTGTTGTTCATATTGAAGAAAAAAGGGTCTCCTGAGCTTGCTATTCGTTCATCTTTGAATTCCTTCAATTAAGAACCTTTTATTTGCCTTCTGCCTTTTTCTTCCTTGCATCCTTCTATATCCCATGTATATCTATGTTGTGGATTGTAATTTAGAGTTTGGGAGTGATTTGAAAATGGTGAAAATCACTTTTGTTATATTCAAAATTACTATAGTACGCCTTTAATAATTCAAATGCGTTGTTTGGTAATCATTTAATTTTTGGTCTTTTGTTTTTAAAAATTAATACTATAGACACTACTTTCAC

Coding sequence (CDS)

ATGGAAGACCCTGAAATGCCTAATCAAAGTTCTGGCTGCACTGTCGACACCTCCCGCCCCTTCCGCTCCGTCAAAGAAGCCGTTGCCGTGTTCGGTGAACGGATTCTAGTCGGAGACTCGTACTCATCATCGCCGAAACCATGTGCTGACGTCCCATTGCCTGAAATAGGCACATGGGAATCATTGCCAAGCCCTACAACAACAGTAAAAGAAGAGAAAGAACATGTTTTGAATACCTTGAAGAAACTTGAGGCAGAGCTGGAAGAGACTAAGGAAGAGTTGAGGTTGCTGAAGGAGAGGGAAGAAGATACAGAAGTGGCATTGGCATCACTGAATGCAGAGCTGCATAAGAACATGTCGAAGTTGGCTGAGGCTGAGGCAGCGGCGGCCGCGGCAAAAGCTGCGGCGACGAGAAGAATTGCAATGGGATGTGAGAGTGGAAGAATAGAAGAAGAAATGAAGAGGTCAGAGTTGAAGATGAAGAGAATTGAGGAGACAGAGTCACCCACATTGGCTCAGATATTGAGCTTTGGAGACAAAATTGGGTATTTTGGAGGTAAAATGGAAAAGAAAAAGATAAAGAAAAAACCAATTATTCCACTGGTGGGAGATTTGTTGTTCATATTGAAGAAAAAAGGGTCTCCTGAGCTTGCTATTCGTTCATCTTTGAATTCCTTCAATTAA

Protein sequence

MEDPEMPNQSSGCTVDTSRPFRSVKEAVAVFGERILVGDSYSSSPKPCADVPLPEIGTWESLPSPTTTVKEEKEHVLNTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMSKLAEAEAAAAAAKAAATRRIAMGCESGRIEEEMKRSELKMKRIEETESPTLAQILSFGDKIGYFGGKMEKKKIKKKPIIPLVGDLLFILKKKGSPELAIRSSLNSFN

Homology

[Close]

BLAST of Clc11G14550 vs. NCBI nr
Match: XP_038877864.1 (WEB family protein At1g75720 [Benincasa hispida])

HSP 1 Score: 362.8 bits (930), Expect = 2.1e-96
Identity = 199/227 (87.67%), Postives = 208/227 (91.63%), Query Frame = 0


Query: 1   MEDPEMPNQSSGCTVDTSRPFRSVKEAVAVFGERILVGDSYSSSPKPCADVPLPEIGTWE 60
           ME  EMPNQSSG  VDTSRPFRSVKEAVAVFGER+LVGD+YSS PKP ADVPLPE+GTWE
Sbjct: 1   MEGSEMPNQSSGSIVDTSRPFRSVKEAVAVFGERLLVGDAYSSLPKPSADVPLPELGTWE 60

Query: 61  SLPSPTTTVKEEKEHVLNTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS 120
           SLPS TTT KEEKEHVL++LKKLEAELEETKEELRLLKE+EEDTEVALASLNAELHKNMS
Sbjct: 61  SLPSSTTTAKEEKEHVLDSLKKLEAELEETKEELRLLKEKEEDTEVALASLNAELHKNMS 120

Query: 121 KLAEAEAAAAAAKAAATRRIAMGCESGRIEEEMKRSELKMKRIEETESPTLAQILSFGDK 180
           KLAEAE AAAAAKA ATRRIAMGCES R EEEMKRSE KM R+EETESPTLAQILSFGDK
Sbjct: 121 KLAEAE-AAAAAKAVATRRIAMGCESERKEEEMKRSEFKMMRMEETESPTLAQILSFGDK 180

Query: 181 IGYFGGKMEKKKIKKKPIIPLVGDLLFILKKKGSPELAIRSSLNSFN 228
           IGYFGGK EKKKIKKKPIIPLVGDLLFI +KKGSPE A+ SS NSFN
Sbjct: 181 IGYFGGKKEKKKIKKKPIIPLVGDLLFIFRKKGSPENALPSSFNSFN 226

[Close]

BLAST of Clc11G14550 vs. NCBI nr
Match: XP_008445978.1 (PREDICTED: LOW QUALITY PROTEIN: WEB family protein At1g75720 [Cucumis melo])

HSP 1 Score: 360.5 bits (924), Expect = 1.0e-95
Identity = 197/227 (86.78%), Postives = 211/227 (92.95%), Query Frame = 0


Query: 1   MEDPEMPNQSSGCTVDTSRPFRSVKEAVAVFGERILVGDSYSSSPKPCADVPLPEIGTWE 60
           MEDPE+P+QSS  TVDTSRPFRSVKEAVAVFGER+LVGD+YSSSPKP  D PLPEIGTWE
Sbjct: 1   MEDPEIPSQSSASTVDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE 60

Query: 61  SLPSPTTTVKEEKEHVLNTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS 120
           ++PS TTT+KEEKEHVL++LKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS
Sbjct: 61  AMPSSTTTIKEEKEHVLDSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS 120

Query: 121 KLAEAEAAAAAAKAAATRRIAMGCESGRIEEEMKRSELKMKRIEETESPTLAQILSFGDK 180
           KLAEAE AAAAAKAAATRRIA GCE GRIEEEMKRSELKM+R+EETESPTLAQILSFGDK
Sbjct: 121 KLAEAE-AAAAAKAAATRRIATGCERGRIEEEMKRSELKMRRMEETESPTLAQILSFGDK 180

Query: 181 IGYFGGKMEKKKIKKKPIIPLVGDLLFILKKKGSPELAIRSSLNSFN 228
           IGYFGGK EKKK K+KPIIPLVGDLL IL+KKGS E  +RSS NSFN
Sbjct: 181 IGYFGGKKEKKK-KEKPIIPLVGDLLLILRKKGSSESDLRSSFNSFN 225

[Close]

BLAST of Clc11G14550 vs. NCBI nr
Match: XP_004135525.2 (WEB family protein At1g75720 [Cucumis sativus])

HSP 1 Score: 339.7 bits (870), Expect = 1.9e-89
Identity = 188/224 (83.93%), Postives = 202/224 (90.18%), Query Frame = 0


Query: 1   MEDPEMPNQSSGCTVDTSRPFRSVKEAVAVFGERILVGDSYSSSPKPCADVPLPEIGTWE 60
           MEDPE+P+Q+S   VDTSRPFRSVKEAVAVFGER+LVGD+YSSSPKP  D PLPEIGTWE
Sbjct: 51  MEDPEIPSQTSASAVDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE 110

Query: 61  SLPSPTTTVKEEKEHVLNTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS 120
           ++PS TTT+KEEKEHVL +LKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS
Sbjct: 111 AMPSSTTTIKEEKEHVLVSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS 170

Query: 121 KLAEAEAAAAAAKAAATRRIAMGCESGRIEEEMKRSELKMKRIEETESPTLAQILSFGDK 180
           KLAEAE AAAA KAAA RRI     SGRIEEEMKRSELKM+R+EET+SPTLAQILSFGDK
Sbjct: 171 KLAEAE-AAAAGKAAAARRIV---TSGRIEEEMKRSELKMRRMEETDSPTLAQILSFGDK 230

Query: 181 IGYFGGKMEKKKIKKKPIIPLVGDLLFILKKKGSPELAIRSSLN 225
           IGYFGGK EKKKIKKKPIIPLVGDLL IL+KKGS E  +RSS N
Sbjct: 231 IGYFGGKKEKKKIKKKPIIPLVGDLLLILRKKGSSENDLRSSFN 270

[Close]

BLAST of Clc11G14550 vs. NCBI nr
Match: KAA0034154.1 (nifU-like protein 2 [Cucumis melo var. makuwa] >TYK15765.1 nifU-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 333.2 bits (853), Expect = 1.8e-87
Identity = 180/201 (89.55%), Postives = 191/201 (95.02%), Query Frame = 0


Query: 1   MEDPEMPNQSSGCTVDTSRPFRSVKEAVAVFGERILVGDSYSSSPKPCADVPLPEIGTWE 60
           MEDPE+P+QSS  TVDTSRPFRSVKEAVAVFGER+LVGD+YSSSPKP  D PLPEIGTWE
Sbjct: 1   MEDPEIPSQSSASTVDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE 60

Query: 61  SLPSPTTTVKEEKEHVLNTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS 120
           ++PS TTT+KEEKEHVL++LKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS
Sbjct: 61  AMPSSTTTIKEEKEHVLDSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS 120

Query: 121 KLAEAEAAAAAAKAAATRRIAMGCESGRIEEEMKRSELKMKRIEETESPTLAQILSFGDK 180
           KLAEAE AAAAAKAAATRRIA GCE GRIEEEMKRSELKM+R+EETESPTLAQILSFGDK
Sbjct: 121 KLAEAE-AAAAAKAAATRRIATGCERGRIEEEMKRSELKMRRMEETESPTLAQILSFGDK 180

Query: 181 IGYFGGKMEKKKIKKKPIIPL 202
           IGYFGGK EKKKIKKKPIIPL
Sbjct: 181 IGYFGGKKEKKKIKKKPIIPL 200

[Close]

BLAST of Clc11G14550 vs. NCBI nr
Match: XP_023544273.1 (WEB family protein At3g51220 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 288.5 bits (737), Expect = 5.0e-74
Identity = 173/229 (75.55%), Postives = 185/229 (80.79%), Query Frame = 0


Query: 1   MEDPEMPNQSSGCTVDTSRPFRSVKEAVAVFGERILVGDSYSSSPKPCADVPLPEIGTWE 60
           MEDPEMPNQSS   VDTSRPFRSVKEAVAVFGER+LVG++YSSSPKPCA+ PL E GTW+
Sbjct: 1   MEDPEMPNQSSASIVDTSRPFRSVKEAVAVFGERLLVGEAYSSSPKPCANAPLAETGTWD 60

Query: 61  SLPSPTTTVKEEKEH-VLNTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM 120
           SL S TTT+KEEKEH VL+TLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM
Sbjct: 61  SLLSSTTTLKEEKEHEVLDTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM 120

Query: 121 SKLAEAEA-AAAAAKAAATRRIAMGCESGRIEEEMKRSELKMKRIEETESPTLAQILSFG 180
           SKLAEAEA AAAAAKA ATRRI MGCESGRIEEEMKR+E             L QIL   
Sbjct: 121 SKLAEAEAEAAAAAKAVATRRITMGCESGRIEEEMKRTE------------ALTQILR-- 180

Query: 181 DKIGYFGGKMEKKKIKKKPIIPLVGDLLFILKKKGSPELAIRSSLNSFN 228
                FGGK EKKK+KKKPIIPLVGDLL  L++KGS    + SS  SFN
Sbjct: 181 -----FGGKKEKKKVKKKPIIPLVGDLLMRLRRKGS----LSSSFKSFN 206

[Close]

BLAST of Clc11G14550 vs. ExPASy Swiss-Prot
Match: Q9SD24 (WEB family protein At3g51220 OS=Arabidopsis thaliana OX=3702 GN=At3g51220 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 3.9e-05
Identity = 33/83 (39.76%), Postives = 47/83 (56.63%), Query Frame = 0


Query: 15 VDTSRPFRSVKEAVAVFGERILVGDSYSSSP---KPCADVPLPEIGTWESLPSPTTTVKE 74
          ++T  PFRSVKEAV +FGERIL+GD+Y S       C  +    +   E+L       +E
Sbjct: 6  IETGAPFRSVKEAVTLFGERILLGDNYISKSVERSSCKSIQDELVEAKENLKK----AEE 65

Query: 75 EKEHVLNTLKKLEAELEETKEEL 95
          E + +   ++ L  ELE TKE+L
Sbjct: 66 ENKVLSQLIESLTQELETTKEKL 84

[Close]

BLAST of Clc11G14550 vs. ExPASy Swiss-Prot
Match: F4I0N3 (WEB family protein At1g75720 OS=Arabidopsis thaliana OX=3702 GN=At1g75720 PE=3 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 9.7e-04
Identity = 60/202 (29.70%), Postives = 88/202 (43.56%), Query Frame = 0


Query: 15  VDTSRPFRSVKEAVAVFGERILVGDSYSSSPKPCADVPLPEIGTWESLPSPTTTVKEEKE 74
           +DT+ PFR+VKEAVA+FGER+L    YS+  K   D        WE      + +K E +
Sbjct: 10  IDTTAPFRTVKEAVALFGERVLASQVYSNHLKVMHD------EKWED----PSGIKIELQ 69

Query: 75  HVLNTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMSKLAEAEAAAAAAKA 134
                LK+ + E  + +  L  LKE  E T+  L  L  +   N +KL E          
Sbjct: 70  ETRYDLKRAKEESIQMRNSLSCLKEELERTKQELQKLRVDPGVNETKLDE---------- 129

Query: 135 AATRRIAMGCESGRIEEEMKRS----ELKMKRIEETESPTLAQILSFGDKIGYFGGKMEK 194
               +        R+++E  RS     +  KR  +  +PT      F ++      K +K
Sbjct: 130 -TVFKTKFEVLVPRVDDEPIRSPRLRSMSEKRYVKFANPTGNNGSVFLERHPSMKKKEKK 189

Query: 195 -KKIKKKPIIPLVGDLLFILKK 212
            K  KKK +IPL    +F  KK
Sbjct: 190 TKDKKKKSLIPLFIGGIFSKKK 190

[Close]

BLAST of Clc11G14550 vs. ExPASy TrEMBL
Match: A0A1S3BDZ1 (LOW QUALITY PROTEIN: WEB family protein At1g75720 OS=Cucumis melo OX=3656 GN=LOC103488845 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 5.0e-96
Identity = 197/227 (86.78%), Postives = 211/227 (92.95%), Query Frame = 0


Query: 1   MEDPEMPNQSSGCTVDTSRPFRSVKEAVAVFGERILVGDSYSSSPKPCADVPLPEIGTWE 60
           MEDPE+P+QSS  TVDTSRPFRSVKEAVAVFGER+LVGD+YSSSPKP  D PLPEIGTWE
Sbjct: 1   MEDPEIPSQSSASTVDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE 60

Query: 61  SLPSPTTTVKEEKEHVLNTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS 120
           ++PS TTT+KEEKEHVL++LKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS
Sbjct: 61  AMPSSTTTIKEEKEHVLDSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS 120

Query: 121 KLAEAEAAAAAAKAAATRRIAMGCESGRIEEEMKRSELKMKRIEETESPTLAQILSFGDK 180
           KLAEAE AAAAAKAAATRRIA GCE GRIEEEMKRSELKM+R+EETESPTLAQILSFGDK
Sbjct: 121 KLAEAE-AAAAAKAAATRRIATGCERGRIEEEMKRSELKMRRMEETESPTLAQILSFGDK 180

Query: 181 IGYFGGKMEKKKIKKKPIIPLVGDLLFILKKKGSPELAIRSSLNSFN 228
           IGYFGGK EKKK K+KPIIPLVGDLL IL+KKGS E  +RSS NSFN
Sbjct: 181 IGYFGGKKEKKK-KEKPIIPLVGDLLLILRKKGSSESDLRSSFNSFN 225

[Close]

BLAST of Clc11G14550 vs. ExPASy TrEMBL
Match: A0A0A0KPW0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G586550 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 9.2e-90
Identity = 188/224 (83.93%), Postives = 202/224 (90.18%), Query Frame = 0


Query: 1   MEDPEMPNQSSGCTVDTSRPFRSVKEAVAVFGERILVGDSYSSSPKPCADVPLPEIGTWE 60
           MEDPE+P+Q+S   VDTSRPFRSVKEAVAVFGER+LVGD+YSSSPKP  D PLPEIGTWE
Sbjct: 1   MEDPEIPSQTSASAVDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE 60

Query: 61  SLPSPTTTVKEEKEHVLNTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS 120
           ++PS TTT+KEEKEHVL +LKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS
Sbjct: 61  AMPSSTTTIKEEKEHVLVSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS 120

Query: 121 KLAEAEAAAAAAKAAATRRIAMGCESGRIEEEMKRSELKMKRIEETESPTLAQILSFGDK 180
           KLAEAE AAAA KAAA RRI     SGRIEEEMKRSELKM+R+EET+SPTLAQILSFGDK
Sbjct: 121 KLAEAE-AAAAGKAAAARRIV---TSGRIEEEMKRSELKMRRMEETDSPTLAQILSFGDK 180

Query: 181 IGYFGGKMEKKKIKKKPIIPLVGDLLFILKKKGSPELAIRSSLN 225
           IGYFGGK EKKKIKKKPIIPLVGDLL IL+KKGS E  +RSS N
Sbjct: 181 IGYFGGKKEKKKIKKKPIIPLVGDLLLILRKKGSSENDLRSSFN 220

[Close]

BLAST of Clc11G14550 vs. ExPASy TrEMBL
Match: A0A5A7SSG4 (NifU-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002690 PE=3 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 8.6e-88
Identity = 180/201 (89.55%), Postives = 191/201 (95.02%), Query Frame = 0


Query: 1   MEDPEMPNQSSGCTVDTSRPFRSVKEAVAVFGERILVGDSYSSSPKPCADVPLPEIGTWE 60
           MEDPE+P+QSS  TVDTSRPFRSVKEAVAVFGER+LVGD+YSSSPKP  D PLPEIGTWE
Sbjct: 1   MEDPEIPSQSSASTVDTSRPFRSVKEAVAVFGERLLVGDAYSSSPKPSTDAPLPEIGTWE 60

Query: 61  SLPSPTTTVKEEKEHVLNTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS 120
           ++PS TTT+KEEKEHVL++LKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS
Sbjct: 61  AMPSSTTTIKEEKEHVLDSLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMS 120

Query: 121 KLAEAEAAAAAAKAAATRRIAMGCESGRIEEEMKRSELKMKRIEETESPTLAQILSFGDK 180
           KLAEAE AAAAAKAAATRRIA GCE GRIEEEMKRSELKM+R+EETESPTLAQILSFGDK
Sbjct: 121 KLAEAE-AAAAAKAAATRRIATGCERGRIEEEMKRSELKMRRMEETESPTLAQILSFGDK 180

Query: 181 IGYFGGKMEKKKIKKKPIIPL 202
           IGYFGGK EKKKIKKKPIIPL
Sbjct: 181 IGYFGGKKEKKKIKKKPIIPL 200

[Close]

BLAST of Clc11G14550 vs. ExPASy TrEMBL
Match: A0A6J1KE80 (WEB family protein At3g51220 OS=Cucurbita maxima OX=3661 GN=LOC111493039 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 3.2e-74
Identity = 173/229 (75.55%), Postives = 186/229 (81.22%), Query Frame = 0


Query: 1   MEDPEMPNQSSGCTVDTSRPFRSVKEAVAVFGERILVGDSYSSSPKPCADVPLPEIGTWE 60
           MEDPEMPNQSS   VDTSRPFRSVKEAVAVFGER+LVG++YSSSPKPCA+ PL E GTW+
Sbjct: 1   MEDPEMPNQSSASIVDTSRPFRSVKEAVAVFGERLLVGEAYSSSPKPCANAPLSETGTWD 60

Query: 61  SLPSPTTTVKEEKEH-VLNTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM 120
           SL S TTTVKEEKEH VL+TLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM
Sbjct: 61  SLLSSTTTVKEEKEHEVLDTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM 120

Query: 121 SKLAEAEA-AAAAAKAAATRRIAMGCESGRIEEEMKRSELKMKRIEETESPTLAQILSFG 180
           SKLAEAEA AAAAAKA ATRRI MGCE+GRIEEEMKR+E             LAQIL   
Sbjct: 121 SKLAEAEAEAAAAAKAVATRRITMGCENGRIEEEMKRTE------------ALAQILR-- 180

Query: 181 DKIGYFGGKMEKKKIKKKPIIPLVGDLLFILKKKGSPELAIRSSLNSFN 228
                FGGK EKKK+KKKPIIPLVGDLL  L++KGS    + SS  SF+
Sbjct: 181 -----FGGKKEKKKVKKKPIIPLVGDLLMRLRRKGS----LSSSFKSFD 206

[Close]

BLAST of Clc11G14550 vs. ExPASy TrEMBL
Match: A0A6J1GY99 (WEB family protein At3g51220 OS=Cucurbita moschata OX=3662 GN=LOC111458595 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.5e-71
Identity = 169/229 (73.80%), Postives = 182/229 (79.48%), Query Frame = 0


Query: 1   MEDPEMPNQSSGCTVDTSRPFRSVKEAVAVFGERILVGDSYSSSPKPCADVPLPEIGTWE 60
           MEDPEMPNQSS   VDTSRPFRSVKEAVAVFGER+LV ++YSS PKPC + PL E GTW+
Sbjct: 1   MEDPEMPNQSSASIVDTSRPFRSVKEAVAVFGERLLVEEAYSSLPKPCPNAPLAETGTWD 60

Query: 61  SLPSPTTTVKEEKEH-VLNTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM 120
           SL S TTT+KEEKEH VL+TLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM
Sbjct: 61  SLLSSTTTLKEEKEHEVLDTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNM 120

Query: 121 SKLAEAEA-AAAAAKAAATRRIAMGCESGRIEEEMKRSELKMKRIEETESPTLAQILSFG 180
           S LAEAEA AAAAAKA ATRRI MGCESGRIEEEM+R+E             LAQIL   
Sbjct: 121 SNLAEAEAEAAAAAKAVATRRITMGCESGRIEEEMRRTE------------PLAQILR-- 180

Query: 181 DKIGYFGGKMEKKKIKKKPIIPLVGDLLFILKKKGSPELAIRSSLNSFN 228
                FGGK EKKK+KKKPIIPLVGDLL  L++KGS    + SS  SFN
Sbjct: 181 -----FGGKKEKKKVKKKPIIPLVGDLLMRLRRKGS----LTSSFKSFN 206

[Close]

BLAST of Clc11G14550 vs. TAIR 10
Match: AT1G58070.1 (unknown protein; Has 286 Blast hits to 266 proteins in 81 species: Archae - 2; Bacteria - 25; Metazoa - 90; Fungi - 19; Plants - 78; Viruses - 4; Other Eukaryotes - 68 (source: NCBI BLink). )

HSP 1 Score: 133.7 bits (335), Expect = 1.9e-31
Identity = 111/273 (40.66%), Postives = 145/273 (53.11%), Query Frame = 0


Query: 1   MEDPEMPNQSSGCTVDTSRPFRSVKEAVAVFGERILVG------DSYSSSP--------- 60
           +E+ E  NQ     VDTSRPF SVKEAVA+FG+RI++       +S S+SP         
Sbjct: 3   IEEMEGNNQVEEHHVDTSRPFSSVKEAVAIFGQRIMLPVQTHTMNSKSASPIAASRSINQ 62

Query: 61  -------------KPCADVPLPEIGTWESLPSPTT-----------------------TV 120
                        K       P I     L SP                         + 
Sbjct: 63  NAKPRSPGLSQTVKLVIPTASPSISQTAKLVSPIASPSISQTASSSSSPWKQRSLLPPSP 122

Query: 121 KEEKEHVLNTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMSKLAEAEAAA 180
           +  KE +++ LKKLEAE+ ETK E+++LKERE +TEVALA+LNAELHKN SK+A+AEA A
Sbjct: 123 QGPKEEIMDVLKKLEAEITETKTEVKMLKERESETEVALATLNAELHKNKSKIAKAEADA 182

Query: 181 AAAKAAATRRIAMGCESGRIE--EEMKRSELKMKRIEETESPTLAQIL--SFGDKIGYFG 219
           A   AAA  +     ++   E  E+ +R EL  K   + E P+LAQIL  + G++ GYF 
Sbjct: 183 AGKSAAAMTKSVSFKDTKEKENGEDQRRKELMRKM--QKEYPSLAQILDSNKGNRDGYFA 242

[Close]

BLAST of Clc11G14550 vs. TAIR 10
Match: AT3G51220.1 (Plant protein of unknown function (DUF827) )

HSP 1 Score: 50.1 bits (118), Expect = 2.8e-06
Identity = 33/83 (39.76%), Postives = 47/83 (56.63%), Query Frame = 0


Query: 15 VDTSRPFRSVKEAVAVFGERILVGDSYSSSP---KPCADVPLPEIGTWESLPSPTTTVKE 74
          ++T  PFRSVKEAV +FGERIL+GD+Y S       C  +    +   E+L       +E
Sbjct: 6  IETGAPFRSVKEAVTLFGERILLGDNYISKSVERSSCKSIQDELVEAKENLKK----AEE 65

Query: 75 EKEHVLNTLKKLEAELEETKEEL 95
          E + +   ++ L  ELE TKE+L
Sbjct: 66 ENKVLSQLIESLTQELETTKEKL 84

[Close]

BLAST of Clc11G14550 vs. TAIR 10
Match: AT1G75720.1 (Plant protein of unknown function (DUF827) )

HSP 1 Score: 46.6 bits (109), Expect = 3.1e-05
Identity = 59/202 (29.21%), Postives = 90/202 (44.55%), Query Frame = 0


Query: 15  VDTSRPFRSVKEAVAVFGERILVGDSYSSSPKPCADVPLPEIGTWESLPSPTTTVKEEKE 74
           +DT+ PFR+VKEAVA+FGER+L    YS+  K    + + +   WE      + +K E +
Sbjct: 9   IDTTAPFRTVKEAVALFGERVLASQVYSNHLKVAMKIQMHD-EKWED----PSGIKIELQ 68

Query: 75  HVLNTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMSKLAEAEAAAAAAKA 134
                LK+ + E  + +  L  LKE  E T+  L  L  +   N +KL E          
Sbjct: 69  ETRYDLKRAKEESIQMRNSLSCLKEELERTKQELQKLRVDPGVNETKLDE---------- 128

Query: 135 AATRRIAMGCESGRIEEEMKRS----ELKMKRIEETESPTLAQILSFGDKIGYFGGKMEK 194
               +        R+++E  RS     +  KR  +  +PT      F ++      K +K
Sbjct: 129 -TVFKTKFEVLVPRVDDEPIRSPRLRSMSEKRYVKFANPTGNNGSVFLERHPSMKKKEKK 188

Query: 195 -KKIKKKPIIPLVGDLLFILKK 212
            K  KKK +IPL    +F  KK
Sbjct: 189 TKDKKKKSLIPLFIGGIFSKKK 194

[Close]

BLAST of Clc11G14550 vs. TAIR 10
Match: AT1G75720.2 (Plant protein of unknown function (DUF827) )

HSP 1 Score: 45.4 bits (106), Expect = 6.9e-05
Identity = 60/202 (29.70%), Postives = 88/202 (43.56%), Query Frame = 0


Query: 15  VDTSRPFRSVKEAVAVFGERILVGDSYSSSPKPCADVPLPEIGTWESLPSPTTTVKEEKE 74
           +DT+ PFR+VKEAVA+FGER+L    YS+  K   D        WE      + +K E +
Sbjct: 10  IDTTAPFRTVKEAVALFGERVLASQVYSNHLKVMHD------EKWED----PSGIKIELQ 69

Query: 75  HVLNTLKKLEAELEETKEELRLLKEREEDTEVALASLNAELHKNMSKLAEAEAAAAAAKA 134
                LK+ + E  + +  L  LKE  E T+  L  L  +   N +KL E          
Sbjct: 70  ETRYDLKRAKEESIQMRNSLSCLKEELERTKQELQKLRVDPGVNETKLDE---------- 129

Query: 135 AATRRIAMGCESGRIEEEMKRS----ELKMKRIEETESPTLAQILSFGDKIGYFGGKMEK 194
               +        R+++E  RS     +  KR  +  +PT      F ++      K +K
Sbjct: 130 -TVFKTKFEVLVPRVDDEPIRSPRLRSMSEKRYVKFANPTGNNGSVFLERHPSMKKKEKK 189

Query: 195 -KKIKKKPIIPLVGDLLFILKK 212
            K  KKK +IPL    +F  KK
Sbjct: 190 TKDKKKKSLIPLFIGGIFSKKK 190

The following BLAST results are available for this feature:

BLAST of Clc11G14550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877864.1	2.1e-96	87.67	WEB family protein At1g75720 [Benincasa hispida]	[more]
XP_008445978.1	1.0e-95	86.78	PREDICTED: LOW QUALITY PROTEIN: WEB family protein At1g75720 [Cucumis melo]	[more]
XP_004135525.2	1.9e-89	83.93	WEB family protein At1g75720 [Cucumis sativus]	[more]
KAA0034154.1	1.8e-87	89.55	nifU-like protein 2 [Cucumis melo var. makuwa] >TYK15765.1 nifU-like protein 2 [...	[more]
XP_023544273.1	5.0e-74	75.55	WEB family protein At3g51220 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc11G14550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SD24	3.9e-05	39.76	WEB family protein At3g51220 OS=Arabidopsis thaliana OX=3702 GN=At3g51220 PE=2 S...	[more]
F4I0N3	9.7e-04	29.70	WEB family protein At1g75720 OS=Arabidopsis thaliana OX=3702 GN=At1g75720 PE=3 S...	[more]

BLAST of Clc11G14550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BDZ1	5.0e-96	86.78	LOW QUALITY PROTEIN: WEB family protein At1g75720 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A0A0KPW0	9.2e-90	83.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G586550 PE=4 SV=1	[more]
A0A5A7SSG4	8.6e-88	89.55	NifU-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G0...	[more]
A0A6J1KE80	3.2e-74	75.55	WEB family protein At3g51220 OS=Cucurbita maxima OX=3661 GN=LOC111493039 PE=4 SV...	[more]
A0A6J1GY99	1.5e-71	73.80	WEB family protein At3g51220 OS=Cucurbita moschata OX=3662 GN=LOC111458595 PE=4 ...	[more]

BLAST of Clc11G14550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G58070.1	1.9e-31	40.66	unknown protein; Has 286 Blast hits to 266 proteins in 81 species: Archae - 2; B...	[more]
AT3G51220.1	2.8e-06	39.76	Plant protein of unknown function (DUF827)	[more]
AT1G75720.1	3.1e-05	29.21	Plant protein of unknown function (DUF827)	[more]
AT1G75720.2	6.9e-05	29.70	Plant protein of unknown function (DUF827)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 66..128
None	No IPR available	COILS	Coil	Coil	coord: 146..166
None	No IPR available	PANTHER	PTHR32054	HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED	coord: 9..216
None	No IPR available	PANTHER	PTHR32054:SF11	EXPRESSED PROTEIN	coord: 9..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc11G14550.1	Clc11G14550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009904	chloroplast accumulation movement
biological_process	GO:0009903	chloroplast avoidance movement
biological_process	GO:0016226	iron-sulfur cluster assembly
cellular_component	GO:0005829	cytosol
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding