Clc11G13700 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACTGTCAACTCTCACAGTTGTAAACAACATTTAGTTGAGTTTAGAGAGAGAGAGAGAGAGAGAGAGATGGGGAGAGCTCCATGCTGTGACAAAGAGAAAGTGAAGAAAGGGCCATGGTCACCTGAAGAAGATGAGAAGCTCAAAGCTTATATCCAACTCCATGGAACTGCTGGCAATTGGATTGCTCTTCCCCATAAAATAGGTCTCAAACTAAAATTCATATATATATATTTTTTAATATCATTTTTAGTCTCATGCTTTCAAATTTATTCAATTTTAGTTTATGTACTTAATTTAGTCACTCAAATTTAATTTTTGTCCAAATTAGTTAAATAATAATAATAATAATTTTCATACAAGGAAATACAATATGTGAATTTGTTTTCAAAATTTATAGTAAAAATGATGATAGATGGAACAAAAAGTTTTTACGAAATCAACAATAAACTAATATATAGTAGGGACTAAATTTAAGATTTATTAAAGTATGTGAACTAAAATTGAACAATTGGAAGTACAATAACTAAAATGTAACAAATTTCAAATGATAGGAACTAAAAAATAGTATTTTGAACATTTTTTTTCTTAATTACAAATTTAGTCTCTAAACTTCGAAACTTGTGTCTATTTGGTTCGTGGACTTCTAATTTAATTTTGTGTCCAATGAACTATAAGCTTTCAATTTTATGCCTAATAAACAACTAAAGTATTTCACTTTTTTAAGAATTAATTGATGTATTATATATAAATTTAAATTTTATGTTTGGTAGAATTCTAAAACTTTCAATTTTTGGTCCAGTAGATTAATAATTTTTTAAAAAGAAAATGAAAGTTAAGACTCCGTTTGGAAACCAATTTCATTTTTTGTTTTTGGTTTTTGAAAATTAAGCTTATTTTTCTTCCACATTTCTTACAGTGATTTGCAACTTTCTTAAATACAGTGGTTGAATTCTTAACCAAATTCCAAAACCAAAATAGTTTTTAAAAGCTATTTTTTTGTAGTTTTTAAATTTTGGTTTTGTTTTTAAACTATTGGTAAAAACTAGACGACAAAAGAAGAAATTTGGAAGTAGAAAAAGTATTTATGGACTTAATTTTAAAAAACAAAAACAAAAAAACGAAATCATTACTAGAGGAAATTTTGTAAATTTGAAAGTGAAAAATGTGAAAGTTGAAATAATTTTGATAATATTGAATTTTATGATGAAAAATGAGATGAATGGTAGGGCTGAAGAGATGTGGGAAGAGTTGTAGGCTTAGATGGTTGAATTATTTGAGGCCAAATATCAAACATGGAGGATTCTCTGAAGAAGAAGACAAGATCATTTGTAGCCTTTTCATTAGCATTGGCAGCAGGTTATATTCCTTCTCCTTAAATTCTTTTTTTTCTCACTATAAATATTTTACATTCAACAAATATCACGTGAAACTCATAAATGTATCTATTAAACTCTTAAATTTGTATGAGTGAATCAGTTTCTTTGAAAATTATTCATACATCAATTCTCACATGTGTATACATTTCTTTCAATGTCCATAAAATGGACGTTTAGAATTGATGCATAAATGATTCTTAAAGAGAGTCCCAACGAAAAGTCTAAATAAATTGATTCACCTATAGAATTTCAACCTTTCTAAATGGAATGTAAATTGAGGGAATAAATTCATAATACACTTACATTAAATTTAGAGCTTAAATTAATACAATTATTTATTTAGCATTTTAATTGATACAACTACCTAAATTTAAGAGTATAAATTGATATTTTTCCTAATTTTTACCAATACTTTTCAAAATCTAACATAAGTTTCGGAAAAGATTTATTTTTGTTTTCGAGAAACTCACTAAAACCATAAGAATGGTGAAAACCAATATAAAAAAATTTGGCAAAATATGCAAAGTTTTTCAAATGAAAGACTAAGGTTATTTTTTATAATTATTTGATTCTTGAAATTTGTACATGCTTTGGGACAATTTTTTTTTTTTTAAATTTTTTATAATAGCCTTCATCTTTTTTAATTGATATTTGAATTTTTTTCATATTACAAAAACAAAAATTACTTTTATAATTTTCAAATTTTTACTTAAATTTTGAAAACACCTTAAAAAAAAAAAAAGAAAAAAAGCTATAGTTGAAAGTATGTATAAGCTTAGGTTTCAAAAACTAAATAATTATTACTTACCGCCTAAATTACTATCCAACGCAATCTCAGTAATAAGATATATATGTTTGTGCTTATTTAACTTTAAAAAAATATATCAATTGCATTCCTCAAAACTTTGATTTGAATTATAATAAATTTATGTTATTTTACCTAAGAAATAATCTCTCGAGAAAATTGCATAACCATTACATATTCCAAAAAATCATATTGAAAAACTCATTAACAACCAACACCCATTTGGTAATTGGAATTTATGTCCCAAAAGACAAAAATTTGGAGAAAACTTTTAGTAGTTATGAAAATTGATACTAACTCCATTTATTTTTTGCCACAAAAGTACATTTAAAATTTATGTAGAGTCACGAAGTATATGAATAATAAATTAATAAATCATTTAATGACGTATCAAATAATAAATAGGAGGAGTGAGTATTAAGGTACTATATTTTTTTTCTTAATTCCAACTCTACCTTTTCTTCTCCATTGGAAAGGCTAATGAGGATAGAAAAATGTACATGTATGTTTTTTAGGTGGTCTATAATTGCAGCTCAATTACCCGGAAGAACAGACAACGACGTAAAAAACTATTGGAACACAAAGCTGAAGAAGAAACTCCTCGGAACTCGCAAACAATACTTCTCTAACAACAAGTTATCATCCCACAGCAACTCCACAGATACTGCACAAGCATTGACAAACTCCGCCATTGAAAAGCTTCAGCTTCAAATGCAGCTTCAAGCCCTTCAAAGTTCCTTCTCTTTCAACAACGTCTCGACGCTTTGGCCTCCGATGTGCATCGAGGAAGTTAAGATAGCCCAAACTGCCCAACCGCCCAACGAGAACGATGTTGATGGTGCCTGCTGCAGTGTGGCCACCCCTCTGCTGGAAGGTTGTGCTGTGGATTGCACATCGATTGTTACGGGGAAGAGTCCGGTCGGTTCAAGCCCGACCGAGCTGGAAGATGGAGGAGGTAGAGAGGTTGAGTGTGTGAAGGAAATGGATGGTTCTTCGAAGGAGAGTTTGTATTGGTGGAGTAATGATGTTGATGCCAAATCTGCAGTAGCTACGAAACTGTGGGACACTGCTTCAGTTGATCTTCAGTTCGAAGGGATTTTTAAGGATTTCGAGCAGCTTGGTTACAGCCTTTAGGGAGATGAGTTTCATGTTTGTAATTATTGTTATTATAAAATATGATGAGAGAAAGAGACAGAGAGGTTACTAAGTTTTGTAAATTGTATGAATAATGCAGGTGTATTTTGTAAGTTTTCTTGCACAAATTTCTCATCGGATATGAGAAATTTTCTTAAAACTTTTATCACTAAATTTTTTCCTTCTTAAAGCATAACAAAT ACTGTCAACTCTCACAGTTGTAAACAACATTTAGTTGAGTTTAGAGAGAGAGAGAGAGAGAGAGAGATGGGGAGAGCTCCATGCTGTGACAAAGAGAAAGTGAAGAAAGGGCCATGGTCACCTGAAGAAGATGAGAAGCTCAAAGCTTATATCCAACTCCATGGAACTGCTGGCAATTGGATTGCTCTTCCCCATAAAATAGGGCTGAAGAGATGTGGGAAGAGTTGTAGGCTTAGATGGTTGAATTATTTGAGGCCAAATATCAAACATGGAGGATTCTCTGAAGAAGAAGACAAGATCATTTGTAGCCTTTTCATTAGCATTGGCAGCAGGTGGTCTATAATTGCAGCTCAATTACCCGGAAGAACAGACAACGACGTAAAAAACTATTGGAACACAAAGCTGAAGAAGAAACTCCTCGGAACTCGCAAACAATACTTCTCTAACAACAAGTTATCATCCCACAGCAACTCCACAGATACTGCACAAGCATTGACAAACTCCGCCATTGAAAAGCTTCAGCTTCAAATGCAGCTTCAAGCCCTTCAAAGTTCCTTCTCTTTCAACAACGTCTCGACGCTTTGGCCTCCGATGTGCATCGAGGAAGTTAAGATAGCCCAAACTGCCCAACCGCCCAACGAGAACGATGTTGATGGTGCCTGCTGCAGTGTGGCCACCCCTCTGCTGGAAGGTTGTGCTGTGGATTGCACATCGATTGTTACGGGGAAGAGTCCGGTCGGTTCAAGCCCGACCGAGCTGGAAGATGGAGGAGGTAGAGAGGTTGAGTGTGTGAAGGAAATGGATGGTTCTTCGAAGGAGAGTTTGTATTGGTGGAGTAATGATGTTGATGCCAAATCTGCAGTAGCTACGAAACTGTGGGACACTGCTTCAGTTGATCTTCAGTTCGAAGGGATTTTTAAGGATTTCGAGCAGCTTGGTTACAGCCTTTAGGGAGATGAGTTTCATGTTTGTAATTATTGTTATTATAAAATATGATGAGAGAAAGAGACAGAGAGGTTACTAAGTTTTGTAAATTGTATGAATAATGCAGGTGTATTTTGTAAGTTTTCTTGCACAAATTTCTCATCGGATATGAGAAATTTTCTTAAAACTTTTATCACTAAATTTTTTCCTTCTTAAAGCATAACAAAT ATGGGGAGAGCTCCATGCTGTGACAAAGAGAAAGTGAAGAAAGGGCCATGGTCACCTGAAGAAGATGAGAAGCTCAAAGCTTATATCCAACTCCATGGAACTGCTGGCAATTGGATTGCTCTTCCCCATAAAATAGGGCTGAAGAGATGTGGGAAGAGTTGTAGGCTTAGATGGTTGAATTATTTGAGGCCAAATATCAAACATGGAGGATTCTCTGAAGAAGAAGACAAGATCATTTGTAGCCTTTTCATTAGCATTGGCAGCAGGTGGTCTATAATTGCAGCTCAATTACCCGGAAGAACAGACAACGACGTAAAAAACTATTGGAACACAAAGCTGAAGAAGAAACTCCTCGGAACTCGCAAACAATACTTCTCTAACAACAAGTTATCATCCCACAGCAACTCCACAGATACTGCACAAGCATTGACAAACTCCGCCATTGAAAAGCTTCAGCTTCAAATGCAGCTTCAAGCCCTTCAAAGTTCCTTCTCTTTCAACAACGTCTCGACGCTTTGGCCTCCGATGTGCATCGAGGAAGTTAAGATAGCCCAAACTGCCCAACCGCCCAACGAGAACGATGTTGATGGTGCCTGCTGCAGTGTGGCCACCCCTCTGCTGGAAGGTTGTGCTGTGGATTGCACATCGATTGTTACGGGGAAGAGTCCGGTCGGTTCAAGCCCGACCGAGCTGGAAGATGGAGGAGGTAGAGAGGTTGAGTGTGTGAAGGAAATGGATGGTTCTTCGAAGGAGAGTTTGTATTGGTGGAGTAATGATGTTGATGCCAAATCTGCAGTAGCTACGAAACTGTGGGACACTGCTTCAGTTGATCTTCAGTTCGAAGGGATTTTTAAGGATTTCGAGCAGCTTGGTTACAGCCTTTAG MGRAPCCDKEKVKKGPWSPEEDEKLKAYIQLHGTAGNWIALPHKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDKIICSLFISIGSRWSIIAAQLPGRTDNDVKNYWNTKLKKKLLGTRKQYFSNNKLSSHSNSTDTAQALTNSAIEKLQLQMQLQALQSSFSFNNVSTLWPPMCIEEVKIAQTAQPPNENDVDGACCSVATPLLEGCAVDCTSIVTGKSPVGSSPTELEDGGGREVECVKEMDGSSKESLYWWSNDVDAKSAVATKLWDTASVDLQFEGIFKDFEQLGYSL Homology
BLAST of Clc11G13700 vs. NCBI nr
Match: XP_038890909.1 (transcription factor MYB36-like [Benincasa hispida]) HSP 1 Score: 495.4 bits (1274), Expect = 3.5e-136 Identity = 246/299 (82.27%), Postives = 263/299 (87.96%), Query Frame = 0
BLAST of Clc11G13700 vs. NCBI nr
Match: XP_008452158.1 (PREDICTED: transcription factor MYB36 [Cucumis melo]) HSP 1 Score: 460.7 bits (1184), Expect = 9.6e-126 Identity = 238/301 (79.07%), Postives = 255/301 (84.72%), Query Frame = 0
BLAST of Clc11G13700 vs. NCBI nr
Match: XP_004149093.1 (transcription factor MYB36 [Cucumis sativus] >KAE8651654.1 hypothetical protein Csa_021239 [Cucumis sativus]) HSP 1 Score: 444.1 bits (1141), Expect = 9.3e-121 Identity = 232/301 (77.08%), Postives = 249/301 (82.72%), Query Frame = 0
BLAST of Clc11G13700 vs. NCBI nr
Match: XP_022965905.1 (transcription factor MYB36-like [Cucurbita maxima]) HSP 1 Score: 348.2 bits (892), Expect = 6.9e-92 Identity = 183/294 (62.24%), Postives = 210/294 (71.43%), Query Frame = 0
BLAST of Clc11G13700 vs. NCBI nr
Match: XP_022938000.1 (transcription factor MYB36-like [Cucurbita moschata]) HSP 1 Score: 348.2 bits (892), Expect = 6.9e-92 Identity = 183/294 (62.24%), Postives = 209/294 (71.09%), Query Frame = 0
BLAST of Clc11G13700 vs. ExPASy Swiss-Prot
Match: Q9FKL2 (Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 3.1e-71 Identity = 133/184 (72.28%), Postives = 149/184 (80.98%), Query Frame = 0
BLAST of Clc11G13700 vs. ExPASy Swiss-Prot
Match: Q9M2Y9 (Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 1.2e-59 Identity = 110/176 (62.50%), Postives = 129/176 (73.30%), Query Frame = 0
BLAST of Clc11G13700 vs. ExPASy Swiss-Prot
Match: Q9SJL7 (Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 1.7e-56 Identity = 97/120 (80.83%), Postives = 105/120 (87.50%), Query Frame = 0
BLAST of Clc11G13700 vs. ExPASy Swiss-Prot
Match: F4JSU0 (Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 2.8e-56 Identity = 104/167 (62.28%), Postives = 123/167 (73.65%), Query Frame = 0
BLAST of Clc11G13700 vs. ExPASy Swiss-Prot
Match: Q9FG68 (Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 2.4e-55 Identity = 98/135 (72.59%), Postives = 111/135 (82.22%), Query Frame = 0
BLAST of Clc11G13700 vs. ExPASy TrEMBL
Match: A0A1S3BTZ9 (transcription factor MYB36 OS=Cucumis melo OX=3656 GN=LOC103493261 PE=4 SV=1) HSP 1 Score: 460.7 bits (1184), Expect = 4.6e-126 Identity = 238/301 (79.07%), Postives = 255/301 (84.72%), Query Frame = 0
BLAST of Clc11G13700 vs. ExPASy TrEMBL
Match: A0A6J1HQ22 (transcription factor MYB36-like OS=Cucurbita maxima OX=3661 GN=LOC111465650 PE=4 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 3.3e-92 Identity = 183/294 (62.24%), Postives = 210/294 (71.43%), Query Frame = 0
BLAST of Clc11G13700 vs. ExPASy TrEMBL
Match: A0A6J1FIE9 (transcription factor MYB36-like OS=Cucurbita moschata OX=3662 GN=LOC111444224 PE=4 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 3.3e-92 Identity = 183/294 (62.24%), Postives = 209/294 (71.09%), Query Frame = 0
BLAST of Clc11G13700 vs. ExPASy TrEMBL
Match: A0A6J1DIT5 (transcription factor MYB36-like OS=Momordica charantia OX=3673 GN=LOC111020865 PE=4 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 6.5e-88 Identity = 181/294 (61.56%), Postives = 202/294 (68.71%), Query Frame = 0
BLAST of Clc11G13700 vs. ExPASy TrEMBL
Match: A0A1U8N304 (transcription factor MYB36 OS=Gossypium hirsutum OX=3635 GN=LOC107944093 PE=4 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 2.0e-84 Identity = 176/304 (57.89%), Postives = 209/304 (68.75%), Query Frame = 0
BLAST of Clc11G13700 vs. TAIR 10
Match: AT5G57620.1 (myb domain protein 36 ) HSP 1 Score: 270.0 bits (689), Expect = 2.2e-72 Identity = 133/184 (72.28%), Postives = 149/184 (80.98%), Query Frame = 0
BLAST of Clc11G13700 vs. TAIR 10
Match: AT5G65790.1 (myb domain protein 68 ) HSP 1 Score: 232.6 bits (592), Expect = 3.9e-61 Identity = 102/130 (78.46%), Postives = 115/130 (88.46%), Query Frame = 0
BLAST of Clc11G13700 vs. TAIR 10
Match: AT3G49690.1 (myb domain protein 84 ) HSP 1 Score: 231.5 bits (589), Expect = 8.8e-61 Identity = 110/176 (62.50%), Postives = 129/176 (73.30%), Query Frame = 0
BLAST of Clc11G13700 vs. TAIR 10
Match: AT2G36890.1 (Duplicated homeodomain-like superfamily protein ) HSP 1 Score: 221.1 bits (562), Expect = 1.2e-57 Identity = 97/120 (80.83%), Postives = 105/120 (87.50%), Query Frame = 0
BLAST of Clc11G13700 vs. TAIR 10
Match: AT4G37780.1 (myb domain protein 87 ) HSP 1 Score: 220.3 bits (560), Expect = 2.0e-57 Identity = 104/167 (62.28%), Postives = 123/167 (73.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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