Clc11G13380 (gene) Watermelon (cordophanus) v2

Overview
NameClc11G13380
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionTransmembrane protein
LocationClcChr11: 23835454 .. 23836723 (+)
RNA-Seq ExpressionClc11G13380
SyntenyClc11G13380
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAGAAAAAGAAAAAACCCTTAGAACCTGAGAACAAAAGAAGAAGAAAAGGAAGAAAAAGAGGGAAAGAAAATCGGAAGAAAAATGTCTGAAAGAGAAGACTCTCCTCCTTCACATCATCATCACCATCATCTTCCTCCTCCTTCTCATCTTGAATCTCTCTGTTTCTTCTTCAAAATCCTCCTTCATTCCCTTCAAATCTTCTCCAGAAACAAACGCCATTTCCTCTCCATCTTCCTCTTCCTCTCCGTCCCTCTCTCTCTCCTCCTTTTCACCCTCTCTCTCTCCTCTCACCCTCTCAAATCCCACATCCTCCACCTCGAATCCGTCCTCCGCCATTCCCCTACCCGTTTCGAGTTCCGCCATGTCTTCTCCGAGTCTCGCAACGACGCTTTCTCCCTTCTCCGTCTTCGCGCCGCTTTCTTCCTCCCTATTTACGCCTTTTCCCTCTTTCTCGCCGTTTCTACCGTCTCCTCCACTCTTCTCTCCTTCCAATCCAAACGTCCTACTCTTAAATCCGCTCTCGCTGGTTTTAAAAACTCATGGACTCGTCCTCTCGTTACCACGATTTGTATCTACGCGATTCTCCTGGCCTATTCAATCCTTCCCAACACTCTCGCTTCCATTTCTCCATCTCCGGCTTTAAGGTTTGGAGTTTTGCTGTTTGGCGTTATTTTCGAGGTGTATTTGATTTCGATCTTGAGTTTAAGCCTTGTTGTGTCGATTGCTGAGGAGAGATTTGGTTTTGATGCGATCCGTGCTGCGGCGGGTTTGATGGCCGATCGGAGGTTGAGCGGTTCGATTCTTACGGCGATGTTTCTTCTTGCGTCCAGCTCGATCTCGTCGGAGATGGAGGGGCTTATGGACGGCGTTGATCACTGGATGAGGTCGACGGCGGCGGTGACGTCGAATGTAGCGATCAGCGTCGGGGATAAGTTCGGGTTAATTTTTCTGTACGGAATGGTAATTCTTTCCGGGTATGTGGTAACTACGGTTTTTTACTGCGAATGTAGAAAGAGGGATTTTGTTAGGGCGGATAATGAAGAAGATCGTGACCATATTGTCATGGTTTAATTTTTCATTTTTTTGGGTTTAAACATTTTTCATTGATTTTAACTGATAATTTAATTGGAATATAATTGGCTTGGTCAATTTTTGTTTTTCATTATTATTTATTTTTTTTCAATGTGCAGTTTGTATATTCTATTAGAAAGAAGGCTATTATACTTTTTGTTGGGATTTGTCTATTTTGTTTATTTTTAGCTTTTTC

mRNA sequence

AAAAGAAAAAGAAAAAACCCTTAGAACCTGAGAACAAAAGAAGAAGAAAAGGAAGAAAAAGAGGGAAAGAAAATCGGAAGAAAAATGTCTGAAAGAGAAGACTCTCCTCCTTCACATCATCATCACCATCATCTTCCTCCTCCTTCTCATCTTGAATCTCTCTGTTTCTTCTTCAAAATCCTCCTTCATTCCCTTCAAATCTTCTCCAGAAACAAACGCCATTTCCTCTCCATCTTCCTCTTCCTCTCCGTCCCTCTCTCTCTCCTCCTTTTCACCCTCTCTCTCTCCTCTCACCCTCTCAAATCCCACATCCTCCACCTCGAATCCGTCCTCCGCCATTCCCCTACCCGTTTCGAGTTCCGCCATGTCTTCTCCGAGTCTCGCAACGACGCTTTCTCCCTTCTCCGTCTTCGCGCCGCTTTCTTCCTCCCTATTTACGCCTTTTCCCTCTTTCTCGCCGTTTCTACCGTCTCCTCCACTCTTCTCTCCTTCCAATCCAAACGTCCTACTCTTAAATCCGCTCTCGCTGGTTTTAAAAACTCATGGACTCGTCCTCTCGTTACCACGATTTGTATCTACGCGATTCTCCTGGCCTATTCAATCCTTCCCAACACTCTCGCTTCCATTTCTCCATCTCCGGCTTTAAGGTTTGGAGTTTTGCTGTTTGGCGTTATTTTCGAGGTGTATTTGATTTCGATCTTGAGTTTAAGCCTTGTTGTGTCGATTGCTGAGGAGAGATTTGGTTTTGATGCGATCCGTGCTGCGGCGGGTTTGATGGCCGATCGGAGGTTGAGCGGTTCGATTCTTACGGCGATGTTTCTTCTTGCGTCCAGCTCGATCTCGTCGGAGATGGAGGGGCTTATGGACGGCGTTGATCACTGGATGAGGTCGACGGCGGCGGTGACGTCGAATGTAGCGATCAGCGTCGGGGATAAGTTCGGGTTAATTTTTCTGTACGGAATGGTAATTCTTTCCGGGTATGTGGTAACTACGGTTTTTTACTGCGAATGTAGAAAGAGGGATTTTGTTAGGGCGGATAATGAAGAAGATCGTGACCATATTGTCATGGTTTAATTTTTCATTTTTTTGGGTTTAAACATTTTTCATTGATTTTAACTGATAATTTAATTGGAATATAATTGGCTTGGTCAATTTTTGTTTTTCATTATTATTTATTTTTTTTCAATGTGCAGTTTGTATATTCTATTAGAAAGAAGGCTATTATACTTTTTGTTGGGATTTGTCTATTTTGTTTATTTTTAGCTTTTTC

Coding sequence (CDS)

ATGTCTGAAAGAGAAGACTCTCCTCCTTCACATCATCATCACCATCATCTTCCTCCTCCTTCTCATCTTGAATCTCTCTGTTTCTTCTTCAAAATCCTCCTTCATTCCCTTCAAATCTTCTCCAGAAACAAACGCCATTTCCTCTCCATCTTCCTCTTCCTCTCCGTCCCTCTCTCTCTCCTCCTTTTCACCCTCTCTCTCTCCTCTCACCCTCTCAAATCCCACATCCTCCACCTCGAATCCGTCCTCCGCCATTCCCCTACCCGTTTCGAGTTCCGCCATGTCTTCTCCGAGTCTCGCAACGACGCTTTCTCCCTTCTCCGTCTTCGCGCCGCTTTCTTCCTCCCTATTTACGCCTTTTCCCTCTTTCTCGCCGTTTCTACCGTCTCCTCCACTCTTCTCTCCTTCCAATCCAAACGTCCTACTCTTAAATCCGCTCTCGCTGGTTTTAAAAACTCATGGACTCGTCCTCTCGTTACCACGATTTGTATCTACGCGATTCTCCTGGCCTATTCAATCCTTCCCAACACTCTCGCTTCCATTTCTCCATCTCCGGCTTTAAGGTTTGGAGTTTTGCTGTTTGGCGTTATTTTCGAGGTGTATTTGATTTCGATCTTGAGTTTAAGCCTTGTTGTGTCGATTGCTGAGGAGAGATTTGGTTTTGATGCGATCCGTGCTGCGGCGGGTTTGATGGCCGATCGGAGGTTGAGCGGTTCGATTCTTACGGCGATGTTTCTTCTTGCGTCCAGCTCGATCTCGTCGGAGATGGAGGGGCTTATGGACGGCGTTGATCACTGGATGAGGTCGACGGCGGCGGTGACGTCGAATGTAGCGATCAGCGTCGGGGATAAGTTCGGGTTAATTTTTCTGTACGGAATGGTAATTCTTTCCGGGTATGTGGTAACTACGGTTTTTTACTGCGAATGTAGAAAGAGGGATTTTGTTAGGGCGGATAATGAAGAAGATCGTGACCATATTGTCATGGTTTAA

Protein sequence

MSEREDSPPSHHHHHHLPPPSHLESLCFFFKILLHSLQIFSRNKRHFLSIFLFLSVPLSLLLFTLSLSSHPLKSHILHLESVLRHSPTRFEFRHVFSESRNDAFSLLRLRAAFFLPIYAFSLFLAVSTVSSTLLSFQSKRPTLKSALAGFKNSWTRPLVTTICIYAILLAYSILPNTLASISPSPALRFGVLLFGVIFEVYLISILSLSLVVSIAEERFGFDAIRAAAGLMADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVGDKFGLIFLYGMVILSGYVVTTVFYCECRKRDFVRADNEEDRDHIVMV
Homology
BLAST of Clc11G13380 vs. NCBI nr
Match: KAA0055589.1 (hypothetical protein E6C27_scaffold222G00710 [Cucumis melo var. makuwa] >TYK01336.1 uncharacterized protein E5676_scaffold29G00150 [Cucumis melo var. makuwa])

HSP 1 Score: 551.6 bits (1420), Expect = 4.6e-153
Identity = 297/329 (90.27%), Postives = 309/329 (93.92%), Query Frame = 0

Query: 1   MSEREDSPPSHHHHHHLPPPSHLESLCFFFKILLHSLQIFSRNKRHFLSIFLFLSVPLSL 60
           MSEREDSP  HH HHHL PPS  ESLCFFFKIL HSLQIFSRNKRHFLSIFL LS+PLSL
Sbjct: 1   MSEREDSPHHHHLHHHL-PPSPRESLCFFFKILFHSLQIFSRNKRHFLSIFLLLSLPLSL 60

Query: 61  LLFTLSLSSHPLKSHILHLESVLRHSPTRFEFRHVFSESRNDAFSLLRLRAAFFLPIYAF 120
           LLFTLSLSSHPLKSHILHLESVLRHSPTRFEFRHVFSESRNDAFSLLRLRAAFFLPIYAF
Sbjct: 61  LLFTLSLSSHPLKSHILHLESVLRHSPTRFEFRHVFSESRNDAFSLLRLRAAFFLPIYAF 120

Query: 121 SLFLAVSTVSSTLLSFQSKRPTLKSALAGFKNSWTRPLVTTICIYAILLAYSILPNTLAS 180
           SLFLAVSTVSSTLLSFQSKRP+LKSAL+GFKNSWTRPLVTTICIY IL+AYSI+PNTLAS
Sbjct: 121 SLFLAVSTVSSTLLSFQSKRPSLKSALSGFKNSWTRPLVTTICIYTILVAYSIVPNTLAS 180

Query: 181 ISPSPALRFGVLLFGVIFEVYLISILSLSLVVSIAEERFGFDAIRAAAGLMADRRLSGSI 240
           ISPSPALRF VL+FGV+FEVYLISI+SL LVVSIAEERFGFDAIR AA LMADRRLSGSI
Sbjct: 181 ISPSPALRFVVLVFGVVFEVYLISIMSLGLVVSIAEERFGFDAIRYAAALMADRRLSGSI 240

Query: 241 LTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVGDKFGLIFLYGMVILSGYV 300
           LTAMFL ASS ISSEMEGLMDGVDHWMRSTAAVT+NVA+SVGDK GLI LYGMVI+ GYV
Sbjct: 241 LTAMFLFASSLISSEMEGLMDGVDHWMRSTAAVTTNVAVSVGDKIGLISLYGMVIIFGYV 300

Query: 301 VTTVFYCECRKRDFVRADNEEDRDHIVMV 330
           VTTVFYCECRKRDFVR +NEED DHIVMV
Sbjct: 301 VTTVFYCECRKRDFVRVENEEDHDHIVMV 328

BLAST of Clc11G13380 vs. NCBI nr
Match: KAE8652471.1 (hypothetical protein Csa_014189 [Cucumis sativus])

HSP 1 Score: 545.0 bits (1403), Expect = 4.3e-151
Identity = 296/339 (87.32%), Postives = 310/339 (91.45%), Query Frame = 0

Query: 1   MSEREDSP-----PS-----HHHHHHLPPPSHLESLCFFFKILLHSLQIFSRNKRHFLSI 60
           MSEREDSP     PS     HHH HHLPPPS  ESLCFFFKIL HSLQIFSRNKRHFLSI
Sbjct: 1   MSEREDSPSPSPSPSHLHHLHHHLHHLPPPSPRESLCFFFKILFHSLQIFSRNKRHFLSI 60

Query: 61  FLFLSVPLSLLLFTLSLSSHPLKSHILHLESVLRHSPTRFEFRHVFSESRNDAFSLLRLR 120
           FL LS+PLSLLLFTLSLSSHPLKSHILHLESVLRHSPTRFEFRHVFSESRNDAFSLLRLR
Sbjct: 61  FLLLSLPLSLLLFTLSLSSHPLKSHILHLESVLRHSPTRFEFRHVFSESRNDAFSLLRLR 120

Query: 121 AAFFLPIYAFSLFLAVSTVSSTLLSFQSKRPTLKSALAGFKNSWTRPLVTTICIYAILLA 180
           AAFFLPIYAFSLFLAVSTVSSTLLSF SKRP+LKS+L+GFK SWTRPLVTTICIYAIL+A
Sbjct: 121 AAFFLPIYAFSLFLAVSTVSSTLLSFHSKRPSLKSSLSGFKTSWTRPLVTTICIYAILVA 180

Query: 181 YSILPNTLASISPSPALRFGVLLFGVIFEVYLISILSLSLVVSIAEERFGFDAIRAAAGL 240
           YSI+PNTLASISPSPA RF VL+FG++FEVYLISI SL LVVSIAEERFGFDAIR AAGL
Sbjct: 181 YSIVPNTLASISPSPAFRFVVLVFGLVFEVYLISITSLGLVVSIAEERFGFDAIRYAAGL 240

Query: 241 MADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVGDKFGLIFL 300
           MADRRLSGSILTAMFL+ SS ISSEMEGLMDGVDHWMRSTAAVT+NVA+SVGDK GLI L
Sbjct: 241 MADRRLSGSILTAMFLVGSSLISSEMEGLMDGVDHWMRSTAAVTTNVAVSVGDKIGLISL 300

Query: 301 YGMVILSGYVVTTVFYCECRKRDFVRADNEEDRDHIVMV 330
           YGMVI+ GYVVTTVFYCECRKRDFVR +NEED DHIVMV
Sbjct: 301 YGMVIIFGYVVTTVFYCECRKRDFVRVENEEDHDHIVMV 339

BLAST of Clc11G13380 vs. NCBI nr
Match: XP_038889309.1 (uncharacterized protein LOC120079221 [Benincasa hispida])

HSP 1 Score: 535.0 bits (1377), Expect = 4.5e-148
Identity = 293/331 (88.52%), Postives = 307/331 (92.75%), Query Frame = 0

Query: 1   MSEREDSPPSHHHHHHLPPPSHLESLC--FFFKILLHSLQIFSRNKRHFLSIFLFLSVPL 60
           MSEREDSP S   HH LPP    ESLC  FFFKILLHSLQIFSRNKRHF S+FLFLS+PL
Sbjct: 1   MSEREDSPSS---HHPLPPS---ESLCFFFFFKILLHSLQIFSRNKRHFFSLFLFLSLPL 60

Query: 61  SLLLFTLSLSSHPLKSHILHLESVLRHSPTRFEFRHVFSESRNDAFSLLRLRAAFFLPIY 120
           SLLLFTLSLSSHPLKSHILHLESVLRHSPTRFEFRHVFSESRNDAFSLLRLRAAFF PIY
Sbjct: 61  SLLLFTLSLSSHPLKSHILHLESVLRHSPTRFEFRHVFSESRNDAFSLLRLRAAFFFPIY 120

Query: 121 AFSLFLAVSTVSSTLLSFQSKRPTLKSALAGFKNSWTRPLVTTICIYAILLAYSILPNTL 180
           A SLFLA++TVSSTLLSFQSKRP+LKSALAGFKN+WTRPLVTTICIYAIL+AYS+LPNTL
Sbjct: 121 ALSLFLALATVSSTLLSFQSKRPSLKSALAGFKNTWTRPLVTTICIYAILVAYSVLPNTL 180

Query: 181 ASISPSPALRFGVLLFGVIFEVYLISILSLSLVVSIAEERFGFDAIRAAAGLMADRRLSG 240
           ASISPS  LRF VL+FGV+FEVYLISILSLSLVVSIAE+RFGFDAIR AAGLMADR+L G
Sbjct: 181 ASISPSLPLRFVVLVFGVVFEVYLISILSLSLVVSIAEDRFGFDAIRVAAGLMADRKLCG 240

Query: 241 SILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVGDKFGLIFLYGMVILSG 300
           SILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNV I VGDK GLI LYGMVI+SG
Sbjct: 241 SILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVVIGVGDKIGLISLYGMVIISG 300

Query: 301 YVVTTVFYCECRKRDFVRADNEEDRDHIVMV 330
           YVVTTVFYCECRKRDFVR +NEEDRDHIVMV
Sbjct: 301 YVVTTVFYCECRKRDFVRVENEEDRDHIVMV 325

BLAST of Clc11G13380 vs. NCBI nr
Match: XP_022997441.1 (uncharacterized protein LOC111492360 [Cucurbita maxima] >XP_022997442.1 uncharacterized protein LOC111492360 [Cucurbita maxima])

HSP 1 Score: 480.7 bits (1236), Expect = 1.0e-131
Identity = 269/333 (80.78%), Postives = 286/333 (85.89%), Query Frame = 0

Query: 1   MSEREDSPPSHHHHHHLPPPSHLESLCFF----FKILLHSLQIFSRNKRHFLSIFLFLSV 60
           MSER+DS             SH ESLCFF    FKIL +SLQIFSRNKR FLSIF F ++
Sbjct: 1   MSERDDS------------LSHHESLCFFFVFPFKILFNSLQIFSRNKRIFLSIFFFFAL 60

Query: 61  PLSLLLFTLSLSSHPLKSHILHLESVLRHSPTRFEFRHVFSESRNDAFSLLRLRAAFFLP 120
           PLSLLLF LSLSSHPLKSHILHLESVLRHSPTRFEFRHVFSESR+DAFSLLRLRAAFFLP
Sbjct: 61  PLSLLLFALSLSSHPLKSHILHLESVLRHSPTRFEFRHVFSESRDDAFSLLRLRAAFFLP 120

Query: 121 IYAFSLFLAVSTVSSTLLSFQSKRPTLKSALAGFKNSWTRPLVTTICIYAILLAYSILPN 180
           IYAFSL  A STVS T  SF +KRPTLKS +A  KNSW RPLVTTICIYAIL+AYSI+PN
Sbjct: 121 IYAFSLLTAFSTVSFTHHSFHAKRPTLKSTIALLKNSWNRPLVTTICIYAILVAYSIVPN 180

Query: 181 TLASISPSPALRFGVLLFGVIFEVYLISILSLSLVVSIAEERFGFDAIRAAAGLMADRRL 240
           TLASIS SPALRF +L+ GVIFEVYLI++LSL LVVSIAEERFGFDAIRAAA LMADRRL
Sbjct: 181 TLASISQSPALRFAILVAGVIFEVYLIAVLSLGLVVSIAEERFGFDAIRAAAALMADRRL 240

Query: 241 SGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVGDKFGLIFLYGMVIL 300
           SGSILTAMFLLASSSIS EMEGLMDGVDHWMR+TAAVTSNVAI V DK GLI LYGMVI+
Sbjct: 241 SGSILTAMFLLASSSISWEMEGLMDGVDHWMRTTAAVTSNVAIGVWDKMGLISLYGMVII 300

Query: 301 SGYVVTTVFYCECRKRDFVRADNEEDRDHIVMV 330
           SGYVVTTVFYCECRK+DFVR +NEED DHIV V
Sbjct: 301 SGYVVTTVFYCECRKKDFVRVENEEDHDHIVTV 321

BLAST of Clc11G13380 vs. NCBI nr
Match: KAG6598865.1 (hypothetical protein SDJN03_08643, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 479.6 bits (1233), Expect = 2.2e-131
Identity = 267/333 (80.18%), Postives = 285/333 (85.59%), Query Frame = 0

Query: 1   MSEREDSPPSHHHHHHLPPPSHLESLCFF----FKILLHSLQIFSRNKRHFLSIFLFLSV 60
           MSER+DS             SH ESLCFF    FKIL +SLQIFSRNKR FLSIF F ++
Sbjct: 1   MSERDDS------------LSHHESLCFFFVFPFKILFNSLQIFSRNKRFFLSIFFFFAL 60

Query: 61  PLSLLLFTLSLSSHPLKSHILHLESVLRHSPTRFEFRHVFSESRNDAFSLLRLRAAFFLP 120
           PLSLLLF LSLSSHPLKSHI+HLESVLRHSPTRFEFRHVFSESR+DAFSLLRLRAAFFLP
Sbjct: 61  PLSLLLFALSLSSHPLKSHIIHLESVLRHSPTRFEFRHVFSESRDDAFSLLRLRAAFFLP 120

Query: 121 IYAFSLFLAVSTVSSTLLSFQSKRPTLKSALAGFKNSWTRPLVTTICIYAILLAYSILPN 180
           IY FSL  A STVS T LSF +KRPTLKS +A  KNSW RPLVTTICIYAIL+AYSI+PN
Sbjct: 121 IYVFSLLTAFSTVSFTHLSFHAKRPTLKSTVALLKNSWNRPLVTTICIYAILVAYSIVPN 180

Query: 181 TLASISPSPALRFGVLLFGVIFEVYLISILSLSLVVSIAEERFGFDAIRAAAGLMADRRL 240
           TLASIS SPA+RF +L+ GVIFEVYLI+ILSL LVVSIAEERFGFDAIR AA LMADRRL
Sbjct: 181 TLASISQSPAVRFAILVVGVIFEVYLIAILSLGLVVSIAEERFGFDAIRTAAALMADRRL 240

Query: 241 SGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVGDKFGLIFLYGMVIL 300
           SGSILTAMFLLASSSIS EMEGLMDGVDHWMR+TAAVTSNVAI V DK GLI LYGMVI+
Sbjct: 241 SGSILTAMFLLASSSISWEMEGLMDGVDHWMRTTAAVTSNVAIGVWDKMGLISLYGMVII 300

Query: 301 SGYVVTTVFYCECRKRDFVRADNEEDRDHIVMV 330
           SGYVVTTVFYCECRK+DFVR +NEED DHIV V
Sbjct: 301 SGYVVTTVFYCECRKKDFVRVENEEDHDHIVTV 321

BLAST of Clc11G13380 vs. ExPASy TrEMBL
Match: A0A5A7UQ45 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00150 PE=4 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 2.2e-153
Identity = 297/329 (90.27%), Postives = 309/329 (93.92%), Query Frame = 0

Query: 1   MSEREDSPPSHHHHHHLPPPSHLESLCFFFKILLHSLQIFSRNKRHFLSIFLFLSVPLSL 60
           MSEREDSP  HH HHHL PPS  ESLCFFFKIL HSLQIFSRNKRHFLSIFL LS+PLSL
Sbjct: 1   MSEREDSPHHHHLHHHL-PPSPRESLCFFFKILFHSLQIFSRNKRHFLSIFLLLSLPLSL 60

Query: 61  LLFTLSLSSHPLKSHILHLESVLRHSPTRFEFRHVFSESRNDAFSLLRLRAAFFLPIYAF 120
           LLFTLSLSSHPLKSHILHLESVLRHSPTRFEFRHVFSESRNDAFSLLRLRAAFFLPIYAF
Sbjct: 61  LLFTLSLSSHPLKSHILHLESVLRHSPTRFEFRHVFSESRNDAFSLLRLRAAFFLPIYAF 120

Query: 121 SLFLAVSTVSSTLLSFQSKRPTLKSALAGFKNSWTRPLVTTICIYAILLAYSILPNTLAS 180
           SLFLAVSTVSSTLLSFQSKRP+LKSAL+GFKNSWTRPLVTTICIY IL+AYSI+PNTLAS
Sbjct: 121 SLFLAVSTVSSTLLSFQSKRPSLKSALSGFKNSWTRPLVTTICIYTILVAYSIVPNTLAS 180

Query: 181 ISPSPALRFGVLLFGVIFEVYLISILSLSLVVSIAEERFGFDAIRAAAGLMADRRLSGSI 240
           ISPSPALRF VL+FGV+FEVYLISI+SL LVVSIAEERFGFDAIR AA LMADRRLSGSI
Sbjct: 181 ISPSPALRFVVLVFGVVFEVYLISIMSLGLVVSIAEERFGFDAIRYAAALMADRRLSGSI 240

Query: 241 LTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVGDKFGLIFLYGMVILSGYV 300
           LTAMFL ASS ISSEMEGLMDGVDHWMRSTAAVT+NVA+SVGDK GLI LYGMVI+ GYV
Sbjct: 241 LTAMFLFASSLISSEMEGLMDGVDHWMRSTAAVTTNVAVSVGDKIGLISLYGMVIIFGYV 300

Query: 301 VTTVFYCECRKRDFVRADNEEDRDHIVMV 330
           VTTVFYCECRKRDFVR +NEED DHIVMV
Sbjct: 301 VTTVFYCECRKRDFVRVENEEDHDHIVMV 328

BLAST of Clc11G13380 vs. ExPASy TrEMBL
Match: A0A6J1K518 (uncharacterized protein LOC111492360 OS=Cucurbita maxima OX=3661 GN=LOC111492360 PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 4.8e-132
Identity = 269/333 (80.78%), Postives = 286/333 (85.89%), Query Frame = 0

Query: 1   MSEREDSPPSHHHHHHLPPPSHLESLCFF----FKILLHSLQIFSRNKRHFLSIFLFLSV 60
           MSER+DS             SH ESLCFF    FKIL +SLQIFSRNKR FLSIF F ++
Sbjct: 1   MSERDDS------------LSHHESLCFFFVFPFKILFNSLQIFSRNKRIFLSIFFFFAL 60

Query: 61  PLSLLLFTLSLSSHPLKSHILHLESVLRHSPTRFEFRHVFSESRNDAFSLLRLRAAFFLP 120
           PLSLLLF LSLSSHPLKSHILHLESVLRHSPTRFEFRHVFSESR+DAFSLLRLRAAFFLP
Sbjct: 61  PLSLLLFALSLSSHPLKSHILHLESVLRHSPTRFEFRHVFSESRDDAFSLLRLRAAFFLP 120

Query: 121 IYAFSLFLAVSTVSSTLLSFQSKRPTLKSALAGFKNSWTRPLVTTICIYAILLAYSILPN 180
           IYAFSL  A STVS T  SF +KRPTLKS +A  KNSW RPLVTTICIYAIL+AYSI+PN
Sbjct: 121 IYAFSLLTAFSTVSFTHHSFHAKRPTLKSTIALLKNSWNRPLVTTICIYAILVAYSIVPN 180

Query: 181 TLASISPSPALRFGVLLFGVIFEVYLISILSLSLVVSIAEERFGFDAIRAAAGLMADRRL 240
           TLASIS SPALRF +L+ GVIFEVYLI++LSL LVVSIAEERFGFDAIRAAA LMADRRL
Sbjct: 181 TLASISQSPALRFAILVAGVIFEVYLIAVLSLGLVVSIAEERFGFDAIRAAAALMADRRL 240

Query: 241 SGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVGDKFGLIFLYGMVIL 300
           SGSILTAMFLLASSSIS EMEGLMDGVDHWMR+TAAVTSNVAI V DK GLI LYGMVI+
Sbjct: 241 SGSILTAMFLLASSSISWEMEGLMDGVDHWMRTTAAVTSNVAIGVWDKMGLISLYGMVII 300

Query: 301 SGYVVTTVFYCECRKRDFVRADNEEDRDHIVMV 330
           SGYVVTTVFYCECRK+DFVR +NEED DHIV V
Sbjct: 301 SGYVVTTVFYCECRKKDFVRVENEEDHDHIVTV 321

BLAST of Clc11G13380 vs. ExPASy TrEMBL
Match: A0A2P5BBB7 (Transmembrane protein OS=Trema orientale OX=63057 GN=TorRG33x02_327080 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 2.5e-72
Identity = 170/314 (54.14%), Postives = 222/314 (70.70%), Query Frame = 0

Query: 1   MSERED--SPPSHHHHHHLPPPSHLESLCFFFKILLHSLQIFSRNKRHFLSIFLFLSVPL 60
           MSER+D  S P H   ++    S   S     KILL SL+IF RNK+ FLSIF   ++PL
Sbjct: 1   MSERDDVFSQPHHETSYYYSSSSSSLSCLLTPKILLDSLRIFLRNKQIFLSIFALTTLPL 60

Query: 61  SLLLFTLSLSSHPLKSHILHLESVLRHSPTRFEFRHVFSESRNDAFSLLRLRAAFFLPIY 120
           S LLF+LSLSSH LKS I HLE +   +PTRFE RHV+ ESR DA S+LR +A FFLP Y
Sbjct: 61  SALLFSLSLSSHSLKSRIYHLEFLASLAPTRFEARHVWRESREDAASILRAKALFFLPCY 120

Query: 121 AFSLFLAVSTVSSTLLSFQSKRPTLKSALAGFKNSWTRPLVTTICIYAILLAYSILPNTL 180
           A SL  AV++VSS  L+   KRPTL+SA+A  K +W RPLVT+I ++A+LLAY +   TL
Sbjct: 121 ALSLVAAVASVSSVTLALNGKRPTLRSAVAAVKLTWKRPLVTSILVHALLLAYVLAQRTL 180

Query: 181 ASISPSPALRFGVLLFGVIFEVYLISILSLSLVVSIAEERFGFDAIRAAAGLMADRRLSG 240
           +++ PS A R  +L+ G   E+YL++++SL LVVSIAEERFG++AIRA +GLM  RR+SG
Sbjct: 181 SAVFPSSAPRLLILIVGSGLEIYLMAVMSLGLVVSIAEERFGWEAIRAGSGLMGGRRVSG 240

Query: 241 SILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVGDKFGLIFLYGMVILSG 300
            +L+ MF+L +  I+ E+E +M+G D + R ++ V   VA  VGDK GLI LYG V+L G
Sbjct: 241 WVLSGMFVLLTGYIARELEKVMNGQDPFGRPSSTVV-RVAAGVGDKLGLIGLYGAVVLWG 300

Query: 301 YVVTTVFYCECRKR 313
           YVVT VFYC+CR+R
Sbjct: 301 YVVTAVFYCDCRRR 313

BLAST of Clc11G13380 vs. ExPASy TrEMBL
Match: A0A5E4ETC2 (Uncharacterized protein OS=Prunus dulcis OX=3755 GN=ALMOND_2B005642 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 3.1e-70
Identity = 153/292 (52.40%), Postives = 205/292 (70.21%), Query Frame = 0

Query: 31  KILLHSLQIFSRNKRHFLSIFLFLSVPLSLLLFTLSLSSHPLKSHILHLESVLRHSPTRF 90
           K LL SL+IF RNK  F+SIF   ++PLS LLF+LSLSSHPLKSHI HLES+ R +PTRF
Sbjct: 18  KTLLDSLKIFLRNKLTFISIFALTTLPLSFLLFSLSLSSHPLKSHIFHLESLARLAPTRF 77

Query: 91  EFRHVFSESRNDAFSLLRLRAAFFLPIYAFSLFLAVSTVSSTLLSFQSKRPTLKSALAGF 150
           E R V+ ESR+DA SLLR++A FFLP YA SL  +V+ +++T  SF  KRP L+S+L   
Sbjct: 78  EARQVWKESRDDAVSLLRIKAIFFLPSYALSLLASVTAITATSSSFHGKRPDLRSSLNAV 137

Query: 151 KNSWTRPLVTTICIYAILLAYSILPNTLASISPSPALRFGVLLFGVIFEVYLISILSLSL 210
           K +W RPLVT+ICIYA+ +AY+++P TL+ +  S   RF +L+ G   E+YL+++L L L
Sbjct: 138 KLTWRRPLVTSICIYALSIAYAVVPWTLSIVFNSSWSRFFILVLGSGLEIYLMAVLGLGL 197

Query: 211 VVSIAEERFGFDAIRAAAGLMADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRST 270
           V SI EERFG+DAIRA   LMA +RL G  L+ +F+  +  ++  +E +MDG D    S+
Sbjct: 198 VASILEERFGWDAIRAGWALMAGKRLCGWALSGLFVFLTWVVARRLEEVMDGQDLMEGSS 257

Query: 271 AAVTSNVAISVGDKFGLIFLYGMVILSGYVVTTVFYCECRKRDFVRADNEED 323
            A  + V + + DK G + LYG+V+L GYVVTTVFYCECRKR  +     E+
Sbjct: 258 MATLTRVVVGIEDKLGWVILYGLVVLWGYVVTTVFYCECRKRHVIGGGENEN 309

BLAST of Clc11G13380 vs. ExPASy TrEMBL
Match: A0A6J5VZ77 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS1414 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 9.0e-70
Identity = 153/292 (52.40%), Postives = 204/292 (69.86%), Query Frame = 0

Query: 31  KILLHSLQIFSRNKRHFLSIFLFLSVPLSLLLFTLSLSSHPLKSHILHLESVLRHSPTRF 90
           K LL SL+IF RNK+ F+SIF   ++PLS LLF+LSLSSHPLKSHI HLES+ R SPTRF
Sbjct: 18  KTLLDSLKIFLRNKQTFISIFALTTLPLSFLLFSLSLSSHPLKSHIFHLESLARLSPTRF 77

Query: 91  EFRHVFSESRNDAFSLLRLRAAFFLPIYAFSLFLAVSTVSSTLLSFQSKRPTLKSALAGF 150
           E R V+ ESR+DA SLLR++A FFLP YA SL  +V+ V++T  SF  KRP L+S+L   
Sbjct: 78  EARQVWKESRDDAVSLLRIKAIFFLPSYALSLLASVTAVTATSSSFHGKRPDLRSSLNAV 137

Query: 151 KNSWTRPLVTTICIYAILLAYSILPNTLASISPSPALRFGVLLFGVIFEVYLISILSLSL 210
           K +W RPLVT+ICIYA+ +AY+ +P TL+ +  S   RF +L+ G   E+YL+++L L L
Sbjct: 138 KLTWRRPLVTSICIYALSIAYAFVPWTLSIVFNSSWSRFFILVLGSGLEIYLMAVLGLGL 197

Query: 211 VVSIAEERFGFDAIRAAAGLMADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRST 270
           V SI EERF +DAIR    LMA +RL G  L+ +F+  +  ++ ++E +MDG D    S+
Sbjct: 198 VASILEERFAWDAIRVGWALMAGKRLCGWALSGLFVFLTWVVARKLEEVMDGQDLMEGSS 257

Query: 271 AAVTSNVAISVGDKFGLIFLYGMVILSGYVVTTVFYCECRKRDFVRADNEED 323
            A  + V + + DK G + LYG+V+L GYVVTTVFYCECRKR  +     E+
Sbjct: 258 TATLTRVVVGIEDKLGWVILYGLVVLWGYVVTTVFYCECRKRHVIGGGENEN 309

BLAST of Clc11G13380 vs. TAIR 10
Match: AT4G16850.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G31130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 181.4 bits (459), Expect = 1.2e-45
Identity = 113/281 (40.21%), Postives = 166/281 (59.07%), Query Frame = 0

Query: 33  LLHSLQIFSRNKRHFLSIFLFLSVPLSLLLFTLSLSSHPLKSHILHLESVLRHSPTRFEF 92
           LL S  I  RNK   L IF F+++PL+ L  +L+L+S  LK+H+  LE++     TRFE 
Sbjct: 17  LLDSFMILFRNKHILLPIFAFIAIPLAALHLSLTLTSFRLKNHVFRLEALANVVHTRFEA 76

Query: 93  RHVFSESRNDAFSLLRLRAAFFLPIYAFSLFLAVSTVSSTLLSFQSKRPTLKSALAGFKN 152
           R ++ ESR DA SLL L+  +F+P +  S   +++ ++ST  S Q   P+LKS+ A  K+
Sbjct: 77  RQIWQESREDAVSLLHLKFRYFVPSFILSCMASITVITSTSFSHQGINPSLKSSFASVKS 136

Query: 153 SWTRPLVTTICIYAILLAYSILPNTL-ASISPSPALRFGVLLFGVIFEVYLISILSLSLV 212
           SW R   T+I +Y +L  YS +   L A +  +P LR+ + +  +  EVY+++I  L  V
Sbjct: 137 SWMRVTATSIIVYGLLFLYSPISMFLSALVGYTPTLRYLITILFLGVEVYIMAITGLGFV 196

Query: 213 VSIAEERFGFDAIRAAAGLMADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTA 272
           VS+ EER+GFDAI+    LM  RR++G  L  +F+  SS I   ME L   +D  + S +
Sbjct: 197 VSVLEERYGFDAIKEGTALMKGRRITGLALAGVFVFLSSFIGHGMEKLAKELDMDLSSGS 256

Query: 273 AVTSNVAISVGDKFGLIFLYGMVILSGYVVTTVFYCECRKR 313
              S V     D + L+ +YG  ++  YVV TVFYCECRKR
Sbjct: 257 WWRSVVVAGGWDGWKLVCMYGAEVVLSYVVITVFYCECRKR 297

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0055589.14.6e-15390.27hypothetical protein E6C27_scaffold222G00710 [Cucumis melo var. makuwa] >TYK0133... [more]
KAE8652471.14.3e-15187.32hypothetical protein Csa_014189 [Cucumis sativus][more]
XP_038889309.14.5e-14888.52uncharacterized protein LOC120079221 [Benincasa hispida][more]
XP_022997441.11.0e-13180.78uncharacterized protein LOC111492360 [Cucurbita maxima] >XP_022997442.1 uncharac... [more]
KAG6598865.12.2e-13180.18hypothetical protein SDJN03_08643, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UQ452.2e-15390.27Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1K5184.8e-13280.78uncharacterized protein LOC111492360 OS=Cucurbita maxima OX=3661 GN=LOC111492360... [more]
A0A2P5BBB72.5e-7254.14Transmembrane protein OS=Trema orientale OX=63057 GN=TorRG33x02_327080 PE=4 SV=1[more]
A0A5E4ETC23.1e-7052.40Uncharacterized protein OS=Prunus dulcis OX=3755 GN=ALMOND_2B005642 PE=4 SV=1[more]
A0A6J5VZ779.0e-7052.40Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS1414 PE=4... [more]
Match NameE-valueIdentityDescription
AT4G16850.11.2e-4540.21unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33133OS08G0107100 PROTEIN-RELATEDcoord: 24..324
NoneNo IPR availablePANTHERPTHR33133:SF21TRANSMEMBRANE PROTEINcoord: 24..324

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc11G13380.1Clc11G13380.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane