Clc11G13365 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc11G13365
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Ty3/gypsy retrotransposon protein
Location	ClcChr11: 23804804 .. 23809949 (+)
RNA-Seq Expression	Clc11G13365
Synteny	Clc11G13365

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCTGTAAGGGGAAGTGGGCTTCTGTTGGGCCGGGTATCCGACAGTTATCTGGGAATTTGGGGAAGGTAGTTGTTGTACGGGTGGGGAGTGTTATTTTGTAAGGTTGGCAGCCGTTGGGAAGGTAGGTTTGTTTTTGTAGGGCTTTGTCCTGAGAGGGAGAGGCCAGCACTCTAGAACTTGCTGGGTATCTTGTTCTTCTATTTTGTGTCTTCTTGTAAGGTGGACTGAAGGCTAGAGCCTTGTTTCTGTGAATATATAACTTGGGGAGTTCATATTTTCCCTGATTTCATCATACTCTTGTTAGGTATTTTGTGTTTGCAGGTGGATACCTAACAAATTGGTATCAAAGCTCAGTTCAATGCTAGGAATCGCGAGACAAATGGCACAGAAAATGGCGGAGGAAAGATTCGAAGCTCATGAGAAGGAGTTGACGGTGTTGAGGGACTTGGTAGTTGCGACGTGCAAGAACGTGGAGAGAATGTCAGAGGACCTGCGGGTACTAAGGAAAAATGGAACAAAAGTCAGTCGATGTTGACGGGAGTTCCGCAGACAAAGAACAAGGAAGCAGAGGTCGAAGAAGGCGAGTCATCACAGGGGAGGAATGGGGGATTCAACCGGAGCAAATATAAGAAGCTCAATATGCCCGTTTTCGATGGAGAAGGCCCCGACGCGTGGATATTTCGGGCGGAGACTTTCTTCGAGATTCATGAACTGTCCGACACCGAGAAAATGAAGGTAGTAGTGATCAGCTTCTCGCAAGAGGTAGTCGATTGGTACCGCTGGGCAAACAACCGGAAGCCGATCCGAAATTGGAAGGAGATGAAAGAGAGAATGCTGGAGTGATGGAGATCCACGCTAGAAGGGACTCTCACGAATCAGTTGCTGGCGATAAAGCAAGAGGGAGCTTATGCAGACTACCGCCAAAAGTTCGAAATATTCTCAACCCCGCTGCCGGACCTAAAGGAGAGTGTTTTAGTGACCGCGTTTCTGAATGGGCTGCATCCATCACTGAAAGCCGAGGTCATGAGTAGGAGACTCATGGGCCTGGACCAGTGTATGTTAGAAGCCCAATCCATAGATGACCGAGATATTGCGCTGAAGTTAGCCCTCGAAGAAGTCAAGTTTCAGGAGTCCGATCGAAAAAGGGAGCAGTCTCCAATGACCGGAGTGAAACCAGGAGCCAAGGGTGAATCGGGTCAAAGTAGGTAGGTGACTGTGTTCGAAAAAGGGGGTCTGAGCAAGAAGAGAGAAACGCCGATGAGGAGATTGACTGATGCCAAGTTTAAGGAGAAGAGGGATAAGGAGGGGCTTTGTTTCAAGTGTGATGAGAGAACTTCCAAGGACATCGCTAACGACTGAAGGAAAAAAGGGAGCTGAATGTGATCATAGCCGGCGAAGTAGAGGAACTTGAAGATATCCAAGAAGAAATGGAGGCTAAGATAGAAAAAAAGGCAATGGAAGTAGCGGAAAATGTGCAGCTAGCATTGAGATCCGTTTATGGGTTTTCGGCACCAAGAACAATGAAGATGAAGGGAATTGTGGGAGGGAAGGAAGCCATCGTCCTCATCGACTGCGGGGCGACCCACAACTTTATCCACCAGAAACTAGCAGATGAACTAAACCTCCAAGTAGCCGAGACTTTGAATTATGGTATTGTGGTGGGGAATGGAAAGGCCATTCGAGGCCAAGGCGTGTGCAAGTCGGTTATGGTAATGCTCCAAGGGATCACGATAGTCAACGATTTCCTACCCTTAGAGCTGGGCAAGATGGATGTTATATTGGGGATGGCATGGCTGAGTACCACCGGATTTATAGGGGTGCATTGGCCCTCATTAACCATGACTTTCGCCGTGGGAGAGGACCAGGTAACGCTAAAAGGGGACCCGTCATTAACCAAGACAGAAGTGAGTTTGAAGGTTTTGACGAAGACGTGGGAAACAGAGGACCAGGAGTATTTAGTTGAAATTCAGAACAAGGAGGCGGAAGAAGGGGAAGATAAGGAGCCGACGATAGCTGAACCCGAGGAAGAGCGGTTGCCCGTGATGATTCAAAGCCTTTTGGAGCGCAATGGTGATATATTTGAACTGTCGAGGGGATTACCCCCCAAGCGGGATGTGGATGATCAAATTGCGATGGCTGAGGGATAGGCACCAATCAATGTAAGGCCATACAAGTATGGGCATGTTCAGAAGGATGAGATAGAGAAACTCGTAGGAGAAATGTTGTCAACGGGAATTATAAGGCCAAGTAAAAGTCCATTTTCGAGTCTGGTACTCCTAGTTAAGAAAAAGGATGGGGAATGGAGATTTTGTGTGGATTATCGTAAGGTGAACCAGGCCACCATTGCGGAAAAATTCCCGATTCCGGTGATTGAAGAGCTGTTACATGGGGCTAGCATGTTTTCCAAGCTAGATTTGAGGTCGGCTTACCACCAAATCTGAATGGAAGAGAAGGATATCCCCAAAACAGCATTTAGAAAGCACGAAGGGCACTACGAGTTCTTGGTCATGCCGCTTGGATTGATCAACGCACCAACAACTTTTCTATCCCTAATGAACGAGGTTTTTAAACCGTTTCTAAGAACGTTCATTTTGGTATTCTTTGACGACATCCTTGTCTATAGTGAGGATATTTCTACACATGAGACTCATTTGGCGGTGGTTTTCAACGTCTTGAGGGAGAACAAGTTGTTTGCCAACAGGAAGAGGTGTATTTTCAGCCAGTCAAGGATACAATATTTGGGGCATTGGGTTTCTAAGGAAGGCGTGGAGGCCGATGGTGAGAAAATTAAAGCCATGTTGCAATGGCCTACCCCTAAAAATGTGACCAAGCTGTGTAGTTTTTTGGGGCTCACAGGTTATACAGATGGTTTGTGTTGAACTATGGTATTTTGGCCGCCTCATTAACAAAACTTCTTCACAAGGATGCTTTCCAATGGAGTGAAGAAGCCACCAAGGCGTTCAACATGCTAAAGAATGCGATGTCCACACTACCCGTGCTAGCCTTACCAAACTTTGCTTTACCCTTCACCATGAGACTGATGCTTCTAGGATGGGGGTAGGGGCGGTTCTGATGCAGGAATCTCGGCCAATAGCTTACTTCAACCAAGCTCTATCAACAAGAGCGAGGGCTAAATCGATATACGAAAGAGAATTGATGGCAATGGTGCTCGTCATGCAAAAATGGAGGCATTATTTGTTGGGTAGTAAGTTTACCGTCATTTCTGACCAGAAGGCCCTCAAGTTCCTCATAGAGCAACAAGAAGTACAACCCCAATTCCAGAAGTGGTTAACGAAATTACTGGAGTACGACTTTGAAATCCTATATCAACCTGAATTACAGAATAAGGCGGCGGATGCTTTGTCGAGGATGCCAACACCGACGGAGATTCGAGTGCTAACTACTACGACATTGGTGGATCTGGAGGTAGTGCAGCAAGAGGTCGAGATGGATAAGGACCTACAGAATATTATTGCCAAGCTAAAGGAGGATCCCGACTCGGTCCCAAAATTCTCACTTGAGAGGGGAAGATTACTTTACAAGAAACGGTTGGTAATCCCAAGCACTTCTTCTTTGATTCCATCACTTTTGAGCACTTTCCATGACTCAGTTATAGGAGGCCACTCGGGCGTACATACAAGAGAATGACGGGGGAACTTTATTGGAGGGGCATGAAGAAGGATGTAAAAGAATACGTTGAAAGTTGTGTAATTTGCCAGAAAAACAAGTCAGAAGCAGTCAGTCCAGCCGGGTTGTTGCAGCCTCTTCCGGTCCCAGAGAAAATATGGGGAGATATCACCATGGATTTTGTGGAAGGATTACCCAAGTCACAAGGGAAGGACTCCATCATGGTGGTGGTGGATAGACTGAGCAAATATGGGCACTTCATAGCCCTCAGCCACCCATATAATGCGAAACAGGTAGCTCAAGTCTTTGTTAGGGAAATTGTAAGGCTACATGGGTTTCCCAAATCCATTACATCCAGTAAAGACAAGATTTTTCTCAGTAAGTTTTGGATTGAGTTATTTCGCAGTTAGGGAATGACATTGAAGAGGAGCACTGCCTTCCATCCTCAAACCGACGGATAGATCAAAAGCATGAATAGATGCCTGGAAACCTACTTAAGGTGCTTTTGCAATGAACAACCCAAGGCATGGTATGGGTGGCTACCATGGGTCAAGTATTGGTATAATACTACCTATCATGTTTCAATCAACACCACCCCTTTCAACATTGTTTATGGCACAGCAGCCCTGCCATTGATTTCTTATGAGGAGAACAAGGTATCGAATGACGCAGTGGAACAACAACTAATGGCGAGAGATAAGGCCTTGGTGGCTCTCAAGGAACACTTGGGAATGGCCCAAAACCGTATGAAGAAGATTTATGATTCGAAGAGGGGGAGGTTGAATACGAAGTGGGAAATGAGGTCTTTTTGAAATTGAGACCATATCGCCAAAAGTCGTTAGCCAAGAAGAGATGCGAGAAACTTTCCCCCAAGTTTTACGGGCCATATAGGATGCTTGAAAGAATTGGGCAAGTGGCCTATCGTCTTGAGCTTCCAAGGGAGGCTACAATCCACAATGTGTTCCACGCATCACAATTGAATAAGAAGGTGGGGGAAAGACAAGTGGTTCAAATACACCCACCATAGCTGACGCAAGAGTTTGAGTTCCAGGTTCGTCCGGAGGATATATTGGGGGTGCATTGGAATTCAAAGTTGAGCAAAGAGGAGTGGTTAATCAAATGGGAGAAGTTTCCGGAAAGCGAAGCGACATGGGAGGAAGCAGCATTCATCAAGTACCAATTCCCCGAACTTCACCTTGAGGACAAGGTGCATTTGAAGACCGGGGGTATTGTTAGGCCCCCAATCCATTACACATATCAGCAAAAGAATAAGAAAGGAGGGGAGCAAGCCTAATGGGCCATAAGGGGAAGTGGGCTTCGGTTGGGCCGGGAATTCGGCACTTATCTAGGAATTCGGGGAGGGTAGTTTCCGTACGGGTGGGGAGTGTTATTTTGTAGGGTTGGCAACCGTTGGGAAGGTAGGTTTGTTTTTGTAGGACTTTGTCCTGAGAGTGAGAGGCCAGCACTCTAGAACTTGTTGAGTATCTTGTTCTTCTATTTTGTGTCTTCTTGTAA

mRNA sequence

ATGGGCTGTAAGGGGAAGTGGGCTTCTGTTGGGCCGGGTATCCGACAGTTATCTGGGAATTTGGGGAAGGGAGAGGCCAGCACTCTAGAACTTGCTGGGTATCTTGTTCTTCTATTTTGTGTCTTCTTGTGGATACCTAACAAATTGGTATCAAAGCTCAGTTCAATGCTAGGAATCGCGAGACAAATGGCACAGAAAATGGCGGAGGAAAGATTCGAAGCTCATGAGAAGGAGTTGACGGTGTTGAGGGACTTGGTAGTTGCGACGTGCAAGAACGTGGAGAGAATGTCAGAGGACCTGCGGACAAAGAACAAGGAAGCAGAGGTCGAAGAAGGCGAGTCATCACAGGGGAGGAATGGGGGATTCAACCGGAGCAAATATAAGAAGCTCAATATGCCCGTTTTCGATGGAGAAGGCCCCGACGCGTGGATATTTCGGGCGGAGACTTTCTTCGAGATTCATGAACTAGGTAGTCGATTGGTACCGCTGGGCAAACAACCGGAAGCCGATCCGAAATTGGAAGGAGATGAAAGAGAGAATGCTGGAGTGATGGAGATCCACGCTAGAAGGGACTCTCACGAATCAGTTGCTGGCGATAAAGCAAGAGGGAGCTTATGCAGACTACCGCCAAAAGAGAGTGTTTTAGTGACCGCGTTTCTGAATGGGCTGCATCCATCACTGAAAGCCGAGGTCATGAGTAGGAGACTCATGGGCCTGGACCAGTGTATGTTAGAAGCCCAATCCATAGATGACCGAGATATTGCGCTGAAGTTAGCCCTCGAAGAAGTCAAGTTTCAGGAGTCCGATCGAAAAAGGGAGCAGTCTCCAATGACCGGAGTGAAACCAGGAGCCAAGGGGGGTCTGAGCAAGAAGAGAGAAACGCCGATGAGGAGATTGACTGATGCCAAGTTTAAGGAGAAGAGGGATAAGGAGGGGCTTTGTTTCAAGGAGCTGAATGTGATCATAGCCGGCGAAGTAGAGGAACTTGAAGATATCCAAGAAGAAATGGAGGCTAAGATAGAAAAAAAGGCAATGGAAGTAGCGGAAAATGTGCAGCTAGCATTGAGATCCGTTTATGGGTTTTCGGCACCAAGAACAATGAAGATGAAGGGAATTGTGGGAGGGAAGGAAGCCATCGTCCTCATCGACTGCGGGGCGACCCACAACTTTATCCACCAGAAACTAGCAGATGAACTAAACCTCCAAGTAGCCGAGACTTTGAATTATGGTATTGTGGTGGGGAATGGAAAGGCCATTCGAGGCCAAGGCGTGTGCAAGTCGGTTATGGTAATGCTCCAAGGGATCACGATAGTCAACGATTTCCTACCCTTAGAGCTGGGCAAGATGGATGTTATATTGGGGATGGCATGGCTGAGTACCACCGGATTTATAGGGGTGCATTGGCCCTCATTAACCATGACTTTCGCCGTGGGAGAGGACCAGGTAACGCTAAAAGGGGACCCGTCATTAACCAAGACAGAAGTGAGTTTGAAGGTTTTGACGAAGACGTGGGAAACAGAGGACCAGGAGTATTTAGTTGAAATTCAGAACAAGGAGGCGGAAGAAGGGGAAGATAAGGAGCCGACGATAGCTGAACCCGAGGAAGAGCGGTTGCCCGTGATGATTCAAAGCCTTTTGGAGCGCAATGGTGATATATTTGAACTGTCGAGGGGATTACCCCCCAAGCGGGATGCACCAATCAATGTAAGGCCATACAAGTATGGGCATGTTCAGAAGGATGAGATAGAGAAACTCGTAGGAGAAATGTTGTCAACGGGAATTATAAGGCCAAGTAAAAGTCCATTTTCGAGTCTGGTACTCCTAGTTAAGAAAAAGGATGGGGAATGGAGATTTTGTGTGGATTATCGTAAGGTGAACCAGGCCACCATTGCGGAAAAATTCCCGATTCCGGTGATTGAAGAGCTGTTACATGGGGCTAGCATGTTTTCCAAGCTAGATTTGAGAAAGCACGAAGGGCACTACGAGTTCTTGGTCATGCCGCTTGGATTGATCAACGCACCAACAACTTTTCTATCCCTAATGAACGAGGTTTTTAAACCGTTTCTAAGAACGTTCATTTTGGTATTCTTTGACGACATCCTTGTCTATAGTGAGGATATTTCTACACATGAGACTCATTTGGCGGTGGTTTTCAACGTCTTGAGGGAGAACAAGTTGTTTGCCAACAGGAAGAGGTGTATTTTCAGCCAGTCAAGGATACAATATTTGGGGCATTGGGTTTCTAAGGAAGGCGTGGAGGCCGATGGTGAGAAAATTAAAGCCATGTTGCAATGGCCTACCCCTAAAAATGTGACCAAGCTGTGTAGTTTTTTGGGGCTCACAGGTTATACAGATGGCGTTCAACATGCTAAAGAATGCGATGTCCACACTACCCGTGCTAGCCTTACCAAACTTTGCTTTACCCTTCACCATGAGACTGATGCTTCTAGGATGGGGGTAGGGGCGGTTCTGATGCAGGAATCTCGGCCAATAGCTTACTTCAACCAAGCTCTATCAACAAGAGCGAGGGCTAAATCGATATACGAAAGAGAATTGATGGCAATGGTGCTCGTCATGCAAAAATGGAGGCATTATTTGTTGGGTAGTAAGTTTACCGTCATTTCTGACCAGAAGGCCCTCAAGTTCCTCATAGAGCAACAAGAAGTACAACCCCAATTCCAGAAGTGGTTAACGAAATTACTGGAGTACGACTTTGAAATCCTATATCAACCTGAATTACAGAATAAGGCGGCGGATGCTTTGTCGAGGATGCCAACACCGACGGAGATTCGAGTGCTAACTACTACGACATTGGTGGATCTGGAGGTAGTGCAGCAAGAGGTCGAGATGGATAAGGACCTACAGAATATTATTGCCAAGCTAAAGGAGGATCCCGACTCGGTCCCAAAATTCTCACTTGAGAGGGGAAGATTACTTTACAAGAAACGTTATAGGAGGCCACTCGGGCGTACATACAAGAGAATGACGGGGGAACTTTATTGGAGGGGCATGAAGAAGGATGTAAAAGAATACGTTGAAAGTTGTGTAATTTGCCAGAAAAACAAGTCAGAAGCAGTCAGTCCAGCCGGGTTGTTGCAGCCTCTTCCGGTCCCAGAGAAAATATGGGGAGATATCACCATGGATTTTGTGGAAGGATTACCCAAGTCACAAGGGAAGGACTCCATCATGGTGGTGGTGGATAGACTGAGCAAATATGGGCACTTCATAGCCCTCAGCCACCCATATAATGCGAAACAGGTAGCTCAAGTCTTTGTTAGGGAAATTGCATGGTATGGGTGGCTACCATGGGTCAAGTATTGGTATAATACTACCTATCATGTTTCAATCAACACCACCCCTTTCAACATTGTTTATGGCACAGCAGCCCTGCCATTGATTTCTTATGAGGAGAACAAGGTATCGAATGACGCAGTGGAACAACAACTAATGGCGAGAGATAAGGCCTTGGTGGCTCTCAAGGAACACTTGGGAATGGCCCAAAACCTGGGAAATGAGGTCTTTTTGAAATTGAGACCATATCGCCAAAAGTCGTTAGCCAAGAAGAGATGCGAGAAACTTTCCCCCAAGTTTTACGGGCCATATAGGATGCTTGAAAGAATTGGGCAAGTGGCCTATCGTCTTGAGCTTCCAAGGGAGGCTACAATCCACAATGTGTTCCACGCATCACAATTGAATAAGAAGGTTCGTCCGGAGGATATATTGGGGGTGCATTGGAATTCAAAGTTGAGCAAAGAGGAGTGGTTAATCAAATGGGAGAAGTTTCCGGAAAGCGAAGCGACATGGGAGGAAGCAGCATTCATCAAGTACCAATTCCCCGAACTTCACCTTGAGGACAAGGGGAAGTGGGCTTCGGTTGGGCCGGGAATTCGGCACTTATCTAGGAATTCGGGGAGGGGTTGGCAACCGTTGGGAAGCACTCTAGAACTTGTTGAGTATCTTGTTCTTCTATTTTGTGTCTTCTTGTAA

Coding sequence (CDS)

ATGGGCTGTAAGGGGAAGTGGGCTTCTGTTGGGCCGGGTATCCGACAGTTATCTGGGAATTTGGGGAAGGGAGAGGCCAGCACTCTAGAACTTGCTGGGTATCTTGTTCTTCTATTTTGTGTCTTCTTGTGGATACCTAACAAATTGGTATCAAAGCTCAGTTCAATGCTAGGAATCGCGAGACAAATGGCACAGAAAATGGCGGAGGAAAGATTCGAAGCTCATGAGAAGGAGTTGACGGTGTTGAGGGACTTGGTAGTTGCGACGTGCAAGAACGTGGAGAGAATGTCAGAGGACCTGCGGACAAAGAACAAGGAAGCAGAGGTCGAAGAAGGCGAGTCATCACAGGGGAGGAATGGGGGATTCAACCGGAGCAAATATAAGAAGCTCAATATGCCCGTTTTCGATGGAGAAGGCCCCGACGCGTGGATATTTCGGGCGGAGACTTTCTTCGAGATTCATGAACTAGGTAGTCGATTGGTACCGCTGGGCAAACAACCGGAAGCCGATCCGAAATTGGAAGGAGATGAAAGAGAGAATGCTGGAGTGATGGAGATCCACGCTAGAAGGGACTCTCACGAATCAGTTGCTGGCGATAAAGCAAGAGGGAGCTTATGCAGACTACCGCCAAAAGAGAGTGTTTTAGTGACCGCGTTTCTGAATGGGCTGCATCCATCACTGAAAGCCGAGGTCATGAGTAGGAGACTCATGGGCCTGGACCAGTGTATGTTAGAAGCCCAATCCATAGATGACCGAGATATTGCGCTGAAGTTAGCCCTCGAAGAAGTCAAGTTTCAGGAGTCCGATCGAAAAAGGGAGCAGTCTCCAATGACCGGAGTGAAACCAGGAGCCAAGGGGGGTCTGAGCAAGAAGAGAGAAACGCCGATGAGGAGATTGACTGATGCCAAGTTTAAGGAGAAGAGGGATAAGGAGGGGCTTTGTTTCAAGGAGCTGAATGTGATCATAGCCGGCGAAGTAGAGGAACTTGAAGATATCCAAGAAGAAATGGAGGCTAAGATAGAAAAAAAGGCAATGGAAGTAGCGGAAAATGTGCAGCTAGCATTGAGATCCGTTTATGGGTTTTCGGCACCAAGAACAATGAAGATGAAGGGAATTGTGGGAGGGAAGGAAGCCATCGTCCTCATCGACTGCGGGGCGACCCACAACTTTATCCACCAGAAACTAGCAGATGAACTAAACCTCCAAGTAGCCGAGACTTTGAATTATGGTATTGTGGTGGGGAATGGAAAGGCCATTCGAGGCCAAGGCGTGTGCAAGTCGGTTATGGTAATGCTCCAAGGGATCACGATAGTCAACGATTTCCTACCCTTAGAGCTGGGCAAGATGGATGTTATATTGGGGATGGCATGGCTGAGTACCACCGGATTTATAGGGGTGCATTGGCCCTCATTAACCATGACTTTCGCCGTGGGAGAGGACCAGGTAACGCTAAAAGGGGACCCGTCATTAACCAAGACAGAAGTGAGTTTGAAGGTTTTGACGAAGACGTGGGAAACAGAGGACCAGGAGTATTTAGTTGAAATTCAGAACAAGGAGGCGGAAGAAGGGGAAGATAAGGAGCCGACGATAGCTGAACCCGAGGAAGAGCGGTTGCCCGTGATGATTCAAAGCCTTTTGGAGCGCAATGGTGATATATTTGAACTGTCGAGGGGATTACCCCCCAAGCGGGATGCACCAATCAATGTAAGGCCATACAAGTATGGGCATGTTCAGAAGGATGAGATAGAGAAACTCGTAGGAGAAATGTTGTCAACGGGAATTATAAGGCCAAGTAAAAGTCCATTTTCGAGTCTGGTACTCCTAGTTAAGAAAAAGGATGGGGAATGGAGATTTTGTGTGGATTATCGTAAGGTGAACCAGGCCACCATTGCGGAAAAATTCCCGATTCCGGTGATTGAAGAGCTGTTACATGGGGCTAGCATGTTTTCCAAGCTAGATTTGAGAAAGCACGAAGGGCACTACGAGTTCTTGGTCATGCCGCTTGGATTGATCAACGCACCAACAACTTTTCTATCCCTAATGAACGAGGTTTTTAAACCGTTTCTAAGAACGTTCATTTTGGTATTCTTTGACGACATCCTTGTCTATAGTGAGGATATTTCTACACATGAGACTCATTTGGCGGTGGTTTTCAACGTCTTGAGGGAGAACAAGTTGTTTGCCAACAGGAAGAGGTGTATTTTCAGCCAGTCAAGGATACAATATTTGGGGCATTGGGTTTCTAAGGAAGGCGTGGAGGCCGATGGTGAGAAAATTAAAGCCATGTTGCAATGGCCTACCCCTAAAAATGTGACCAAGCTGTGTAGTTTTTTGGGGCTCACAGGTTATACAGATGGCGTTCAACATGCTAAAGAATGCGATGTCCACACTACCCGTGCTAGCCTTACCAAACTTTGCTTTACCCTTCACCATGAGACTGATGCTTCTAGGATGGGGGTAGGGGCGGTTCTGATGCAGGAATCTCGGCCAATAGCTTACTTCAACCAAGCTCTATCAACAAGAGCGAGGGCTAAATCGATATACGAAAGAGAATTGATGGCAATGGTGCTCGTCATGCAAAAATGGAGGCATTATTTGTTGGGTAGTAAGTTTACCGTCATTTCTGACCAGAAGGCCCTCAAGTTCCTCATAGAGCAACAAGAAGTACAACCCCAATTCCAGAAGTGGTTAACGAAATTACTGGAGTACGACTTTGAAATCCTATATCAACCTGAATTACAGAATAAGGCGGCGGATGCTTTGTCGAGGATGCCAACACCGACGGAGATTCGAGTGCTAACTACTACGACATTGGTGGATCTGGAGGTAGTGCAGCAAGAGGTCGAGATGGATAAGGACCTACAGAATATTATTGCCAAGCTAAAGGAGGATCCCGACTCGGTCCCAAAATTCTCACTTGAGAGGGGAAGATTACTTTACAAGAAACGTTATAGGAGGCCACTCGGGCGTACATACAAGAGAATGACGGGGGAACTTTATTGGAGGGGCATGAAGAAGGATGTAAAAGAATACGTTGAAAGTTGTGTAATTTGCCAGAAAAACAAGTCAGAAGCAGTCAGTCCAGCCGGGTTGTTGCAGCCTCTTCCGGTCCCAGAGAAAATATGGGGAGATATCACCATGGATTTTGTGGAAGGATTACCCAAGTCACAAGGGAAGGACTCCATCATGGTGGTGGTGGATAGACTGAGCAAATATGGGCACTTCATAGCCCTCAGCCACCCATATAATGCGAAACAGGTAGCTCAAGTCTTTGTTAGGGAAATTGCATGGTATGGGTGGCTACCATGGGTCAAGTATTGGTATAATACTACCTATCATGTTTCAATCAACACCACCCCTTTCAACATTGTTTATGGCACAGCAGCCCTGCCATTGATTTCTTATGAGGAGAACAAGGTATCGAATGACGCAGTGGAACAACAACTAATGGCGAGAGATAAGGCCTTGGTGGCTCTCAAGGAACACTTGGGAATGGCCCAAAACCTGGGAAATGAGGTCTTTTTGAAATTGAGACCATATCGCCAAAAGTCGTTAGCCAAGAAGAGATGCGAGAAACTTTCCCCCAAGTTTTACGGGCCATATAGGATGCTTGAAAGAATTGGGCAAGTGGCCTATCGTCTTGAGCTTCCAAGGGAGGCTACAATCCACAATGTGTTCCACGCATCACAATTGAATAAGAAGGTTCGTCCGGAGGATATATTGGGGGTGCATTGGAATTCAAAGTTGAGCAAAGAGGAGTGGTTAATCAAATGGGAGAAGTTTCCGGAAAGCGAAGCGACATGGGAGGAAGCAGCATTCATCAAGTACCAATTCCCCGAACTTCACCTTGAGGACAAGGGGAAGTGGGCTTCGGTTGGGCCGGGAATTCGGCACTTATCTAGGAATTCGGGGAGGGGTTGGCAACCGTTGGGAAGCACTCTAGAACTTGTTGAGTATCTTGTTCTTCTATTTTGTGTCTTCTTGTAA

Protein sequence

MGCKGKWASVGPGIRQLSGNLGKGEASTLELAGYLVLLFCVFLWIPNKLVSKLSSMLGIARQMAQKMAEERFEAHEKELTVLRDLVVATCKNVERMSEDLRTKNKEAEVEEGESSQGRNGGFNRSKYKKLNMPVFDGEGPDAWIFRAETFFEIHELGSRLVPLGKQPEADPKLEGDERENAGVMEIHARRDSHESVAGDKARGSLCRLPPKESVLVTAFLNGLHPSLKAEVMSRRLMGLDQCMLEAQSIDDRDIALKLALEEVKFQESDRKREQSPMTGVKPGAKGGLSKKRETPMRRLTDAKFKEKRDKEGLCFKELNVIIAGEVEELEDIQEEMEAKIEKKAMEVAENVQLALRSVYGFSAPRTMKMKGIVGGKEAIVLIDCGATHNFIHQKLADELNLQVAETLNYGIVVGNGKAIRGQGVCKSVMVMLQGITIVNDFLPLELGKMDVILGMAWLSTTGFIGVHWPSLTMTFAVGEDQVTLKGDPSLTKTEVSLKVLTKTWETEDQEYLVEIQNKEAEEGEDKEPTIAEPEEERLPVMIQSLLERNGDIFELSRGLPPKRDAPINVRPYKYGHVQKDEIEKLVGEMLSTGIIRPSKSPFSSLVLLVKKKDGEWRFCVDYRKVNQATIAEKFPIPVIEELLHGASMFSKLDLRKHEGHYEFLVMPLGLINAPTTFLSLMNEVFKPFLRTFILVFFDDILVYSEDISTHETHLAVVFNVLRENKLFANRKRCIFSQSRIQYLGHWVSKEGVEADGEKIKAMLQWPTPKNVTKLCSFLGLTGYTDGVQHAKECDVHTTRASLTKLCFTLHHETDASRMGVGAVLMQESRPIAYFNQALSTRARAKSIYERELMAMVLVMQKWRHYLLGSKFTVISDQKALKFLIEQQEVQPQFQKWLTKLLEYDFEILYQPELQNKAADALSRMPTPTEIRVLTTTTLVDLEVVQQEVEMDKDLQNIIAKLKEDPDSVPKFSLERGRLLYKKRYRRPLGRTYKRMTGELYWRGMKKDVKEYVESCVICQKNKSEAVSPAGLLQPLPVPEKIWGDITMDFVEGLPKSQGKDSIMVVVDRLSKYGHFIALSHPYNAKQVAQVFVREIAWYGWLPWVKYWYNTTYHVSINTTPFNIVYGTAALPLISYEENKVSNDAVEQQLMARDKALVALKEHLGMAQNLGNEVFLKLRPYRQKSLAKKRCEKLSPKFYGPYRMLERIGQVAYRLELPREATIHNVFHASQLNKKVRPEDILGVHWNSKLSKEEWLIKWEKFPESEATWEEAAFIKYQFPELHLEDKGKWASVGPGIRHLSRNSGRGWQPLGSTLELVEYLVLLFCVFL

Homology

[Close]

BLAST of Clc11G13365 vs. NCBI nr
Match: TYK21035.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK30523.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1149.8 bits (2973), Expect = 0.0e+00
Identity = 688/1499 (45.90%), Postives = 886/1499 (59.11%), Query Frame = 0


Query: 63   MAQKMAEERFEAHEKELTVLRDLVVATCKNVERMSEDLRTKNKEAEVEEGES-------- 122
            MAQ+  EER E  EKE+  L+++++   K+++R++++LR ++ + + E G S        
Sbjct: 1    MAQRQMEERLEGTEKEVLSLKEMMLEMKKSMDRLADELRDQSYKKKEESGTSDGSIMKMK 60

Query: 123  ---------SQGRNGGFNRSKYKKLNMPVFDGEGPDAWIFRAETFFEIHELGS------R 182
                      +      +RSKYKKL MP+F GE P++W++RAE FFEI+ L         
Sbjct: 61   GKMEETDVTGEIHTHQIDRSKYKKLEMPMFLGENPESWVYRAEHFFEINNLPEAEKVKVA 120

Query: 183  LVPLGKQPEAD--------PKLEGDE--------------RENAGVMEIHARRDSHESVA 242
            +V  G Q E D         K+E  E              + + G   I  +++   S  
Sbjct: 121  VVSFG-QDEVDWYRWSHNRRKVESWEDLKTRMFEFFRDTGQRSLGARLIRIQQEGSYSDY 180

Query: 243  GDKARGSLCRLP-PKESVLVTAFLNGLHPSLKAEVMSRRLMGLDQCMLEAQSIDDRDIAL 302
              K       LP   ESVL  AFL GL P+L+AEVMSR    L+ CM+ AQ ++DR++AL
Sbjct: 181  VKKFVNYSAPLPHMAESVLRDAFLTGLEPALQAEVMSRHPQTLEDCMMAAQLVNDRNLAL 240

Query: 303  KLALEEVKFQESDR-----------------KREQSPMTGVKPGAKGGLSKKRETPMRRL 362
            KLA  E+   E  R                 ++ +  M  +    KG   +K E P++RL
Sbjct: 241  KLAQAEMGIIEPKRSESAGNKVQWNNDKGMMRKNEFQMKQITIPLKGSY-QKGEPPVKRL 300

Query: 363  TDAKFKEKRDKEGLCF-----------------KELNVIIAGE---VEELEDIQEEMEAK 422
            +DA+F+ + DK GLCF                 +EL + I  E    EE E  +      
Sbjct: 301  SDAEFRARLDK-GLCFRCNEKYSHGHRCKIKEKRELMLFILNEEESTEEGEGSEAPNTGP 360

Query: 423  IEKKAMEVAENVQLALRSVYGFSAPRTMKMKGIVGGKEAIVLIDCGATHNFIHQKLADEL 482
            +E   +E  E   +  R++   +   TMK++GIV GKE IVLID GATHNFIH +L  E 
Sbjct: 361  VEINQLEEPEETMIEYRAITSLTTKGTMKLRGIVKGKEVIVLIDSGATHNFIHHELVTER 420

Query: 483  NLQVAETLNYGIVVGNGKAIRGQGVCKSVMVMLQGITIVNDFLPLELGKMDVILGMAWLS 542
             + +     +GI +G+G + +G+G+C  V + L+G+ +V D L + LG +DV+LGM WL 
Sbjct: 421  KIPINRNTQFGITIGDGTSCKGEGICSKVEIQLEGLRVVTDLLVVGLGTIDVVLGMQWLD 480

Query: 543  TTGFIGVHWPSLTMTFAVGEDQVTLKGDPSLTKTEVSLKVLTKTWETEDQEYLVEIQNKE 602
            TTG + +HWPSLTM F    ++V LKGDP+L + E SLK L KTWE EDQ +L++ Q  E
Sbjct: 481  TTGTMKIHWPSLTMVFWKEGNKVVLKGDPALIRAECSLKTLEKTWEAEDQGFLLDWQRYE 540

Query: 603  AE-EGEDKEPTIAEPEEERLPVMIQSLLERNGDIFELSRGLPPKR-----------DAPI 662
             E E  D + T    +EE LP MIQ LL +  D+F     LPPKR             PI
Sbjct: 541  IENEDADSKNTSQTGDEEGLP-MIQFLLHQYSDVFNSPTTLPPKRIIDHRILTLPGQKPI 600

Query: 663  NVRPYKYGHVQKDEIEKLVGEMLSTGIIRPSKSPFSSLVLLVKKKDGEWRFCVDYRKVNQ 722
            NVRPYKYGH QK+EIEKLV EML TGIIRPS SPFSS VLLVKKKDG WRFCVDYRK+N+
Sbjct: 601  NVRPYKYGHQQKEEIEKLVIEMLQTGIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNK 660

Query: 723  ATIAEKFPIPVIEEL---LHGASMFSKLDL-------------------RKHEGHYEFLV 782
             TIA+KFPIPVIEEL   LHGA++FSKLDL                   R HEGHYEF+V
Sbjct: 661  ITIADKFPIPVIEELLDELHGATVFSKLDLKSGYHQIRMREEDIEKTAFRTHEGHYEFVV 720

Query: 783  MPLGLINAPTTFLSLMNEVFKPFLRTFILVFFDDILVYSEDISTHETHLAVVFNVLRENK 842
            MP GL NAP TF SLMN+VFKPFLR  +LVFFDDILVYS DI+ HE HL +VF  LR+N+
Sbjct: 721  MPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDITEHEKHLGMVFATLRDNQ 780

Query: 843  LFANRKRCIFSQSRIQYLGHWVSKEGVEADGEKIKAMLQWPTPKNVTKLCSFLGLTGY-- 902
            L+ANRK+C+F+ S+I YLGH +SK GVEAD +K+K+MLQWP PK+VT L  FLGLTGY  
Sbjct: 781  LYANRKKCVFAHSQIHYLGHVISKHGVEADQDKVKSMLQWPKPKDVTGLRGFLGLTGYYR 840

Query: 903  -------------TDGVQ-HAKECDVHTTRA--------------SLTKLCFTLHHETDA 962
                         T  +Q +A + D + T A              +L         ETDA
Sbjct: 841  RFVKGYGEIAAPLTKLLQKNAFKWDENATLAFESLKSAMSTIPVLALPDWSLPFMIETDA 900

Query: 963  SRMGVGAVLMQESRPIAYFNQALSTRARAKSIYERELMAMVLVMQKWRHYLLGSKFTVIS 1022
            S  G+GAVL Q S PIA+F+Q LSTRA+AKSIYERELMA+VL +QKWRHYLLG +FT++S
Sbjct: 901  SGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMS 960

Query: 1023 DQKALKFLIEQQEVQPQFQKWLTKLLEYDFEILYQPELQNKAADALSRMPTPTEIRVLTT 1082
            DQKALKFL+EQ+EVQPQFQKWLTKLL YDFEILYQP LQNKAADALSRM    E++ L+T
Sbjct: 961  DQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALST 1020

Query: 1083 TTLVDLEVVQQEVEMDKDLQNIIAKLKEDPDSVPKFSLERGRLLYKKR------------ 1142
            T +VD+EVV +EVE D++LQ +I +L+ +P    K+SL  G L+YK R            
Sbjct: 1021 TGIVDMEVVTKEVEKDEELQLLIQQLQNNPALEGKYSLTNGTLMYKGRVVLSKSSSIIPS 1080

Query: 1143 -----YRRPLG------RTYKRMTGELYWRGMKKDVKEYVESCVICQKNKSEAVSPAGLL 1202
                 +   LG      RTYKRM+GEL+W+GMK+D+K+YVE C ICQ+NKSEA  PAG+L
Sbjct: 1081 LLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVL 1140

Query: 1203 QPLPVPEKIWGDITMDFVEGLPKSQGKDSIMVVVDRLSKYGHFIALSHPYNAKQVAQVFV 1262
            QPLP+P++I  D TMDF+EGLPK+ G + IMVVVDRLSKY +F+ + HP++AKQVA  F+
Sbjct: 1141 QPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFI 1200

Query: 1263 REIA-------------------------------------------------------- 1287
             +I                                                         
Sbjct: 1201 DKIVRRHGIPKSIISDRDKIFVSNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLET 1260

[Close]

BLAST of Clc11G13365 vs. NCBI nr
Match: TYK28944.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1147.9 bits (2968), Expect = 0.0e+00
Identity = 684/1499 (45.63%), Postives = 887/1499 (59.17%), Query Frame = 0


Query: 63   MAQKMAEERFEAHEKELTVLRDLVVATCKNVERMSEDLRTKNKEAEVEEGES-------- 122
            MAQ+  EER E  EKE+  L+++++   K+++R++++LR ++ + + E G S        
Sbjct: 1    MAQRQMEERLEGTEKEVLSLKEMMLEMKKSMDRLADELRDQSYKKKEESGTSDGSIMKMK 60

Query: 123  ---------SQGRNGGFNRSKYKKLNMPVFDGEGPDAWIFRAETFFEIHELGS------R 182
                      +      +RSKYKKL MP+F GE P++W++RAE FFEI+ L         
Sbjct: 61   GKMEETDVTGEIHTHQIDRSKYKKLEMPMFLGENPESWVYRAEHFFEINNLPEAEKVKVA 120

Query: 183  LVPLGKQPEADPKLEGDERENAGVMEIHARRDSHESVAGDKARGS-LCRLPPK------- 242
            +V  G+      +   + R+     ++  R        G K+ G+ L R+  +       
Sbjct: 121  VVSFGQDEVDWYRWSHNRRKVESWEDLKTRMFEFFRDTGQKSLGARLIRIQQEGSYSDYV 180

Query: 243  --------------ESVLVTAFLNGLHPSLKAEVMSRRLMGLDQCMLEAQSIDDRDIALK 302
                          ESVL  AFL GL P+L+AEVMSR    L+ CM+ AQ ++DR++ALK
Sbjct: 181  KKFVNYSAPLPHMAESVLRDAFLTGLEPALQAEVMSRHPQTLEDCMMAAQLVNDRNLALK 240

Query: 303  LALEEVKFQESDR-----------------KREQSPMTGVKPGAKGGLSKKRETPMRRLT 362
            LA  E+   E  R                 ++ +  M  +    KG   +K E P++RL+
Sbjct: 241  LAQAEMGIIEPKRSESVGNKVQWNNEKGMLRKNEFQMKQITIPLKGSY-QKGEPPVKRLS 300

Query: 363  DAKFKEKRDKEGLCF-----------------KELNVIIAGEVEELEDIQEEMEA----K 422
            DA+F+ + DK GLCF                 +EL + I  E E  E+  E  EA     
Sbjct: 301  DAEFRARLDK-GLCFRCNEKYSHGHRCKIKEKRELMLFILNEEESTEE-GEGSEAPNTEP 360

Query: 423  IEKKAMEVAENVQLALRSVYGFSAPRTMKMKGIVGGKEAIVLIDCGATHNFIHQKLADEL 482
            +E   +   E   +  R++   +   TMK++GIV GKE IVLID GATHNFIH +L  E 
Sbjct: 361  VEINQLGEPEETMIEYRAITSLTTKGTMKLRGIVKGKEVIVLIDSGATHNFIHHELVKER 420

Query: 483  NLQVAETLNYGIVVGNGKAIRGQGVCKSVMVMLQGITIVNDFLPLELGKMDVILGMAWLS 542
             + +     +GI +G+G + +G+G+C  V + L+G+ +V D L + LG +DV+LGM WL 
Sbjct: 421  KIPINRNTQFGITIGDGTSCKGEGICSKVEIQLEGLRVVTDLLVVGLGTIDVVLGMQWLD 480

Query: 543  TTGFIGVHWPSLTMTFAVGEDQVTLKGDPSLTKTEVSLKVLTKTWETEDQEYLVEIQNKE 602
            TTG + +HWPSLTM F    ++V LKGDP+L + E SLK L KTWE EDQ +L++ Q  E
Sbjct: 481  TTGTMKIHWPSLTMVFWKEGNKVVLKGDPALIRAECSLKTLEKTWEAEDQGFLLDWQRYE 540

Query: 603  AE-EGEDKEPTIAEPEEERLPVMIQSLLERNGDIFELSRGLPPKR-----------DAPI 662
             E E  D + T    +EE LP MIQ LL +  D+F+    LPPKR             PI
Sbjct: 541  IENEDADSKNTSHTGDEEGLP-MIQFLLHQYSDVFKSPTTLPPKRSIDHRILTLPGQKPI 600

Query: 663  NVRPYKYGHVQKDEIEKLVGEMLSTGIIRPSKSPFSSLVLLVKKKDGEWRFCVDYRKVNQ 722
            NVRPYKYGH QK+EIEKLV EML TGIIRPS SPFSS VLLVKKKDG WRFCVDYRK+N+
Sbjct: 601  NVRPYKYGHQQKEEIEKLVIEMLQTGIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNK 660

Query: 723  ATIAEKFPIPVIEEL---LHGASMFSKLDL-------------------RKHEGHYEFLV 782
             TIA+KFPIPVIEEL   LHGA++FSKLDL                   R HEGHYEF+V
Sbjct: 661  ITIADKFPIPVIEELLDELHGATVFSKLDLKSGYHQIRMREEDIEKTAFRTHEGHYEFVV 720

Query: 783  MPLGLINAPTTFLSLMNEVFKPFLRTFILVFFDDILVYSEDISTHETHLAVVFNVLRENK 842
            MP GL NAP TF SLMN+VFKPFLR  +LVFFDDILVYS DI+ HE HL +VF  LR+N+
Sbjct: 721  MPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDITEHEKHLGMVFATLRDNQ 780

Query: 843  LFANRKRCIFSQSRIQYLGHWVSKEGVEADGEKIKAMLQWPTPKNVTKLCSFLGLTGY-- 902
            L+ANRK+C+F+ S+I YLGH +SK GVEAD +K+K+MLQWP PK+VT L  FLGLTGY  
Sbjct: 781  LYANRKKCVFAHSQIHYLGHVISKHGVEADQDKVKSMLQWPKPKDVTGLRGFLGLTGYYR 840

Query: 903  -------------TDGVQ-HAKECDVHTTRA--------------SLTKLCFTLHHETDA 962
                         T  +Q +A + D + T A              +L         ETDA
Sbjct: 841  RFVKGYGEIAAPLTKLLQKNAFKWDENATLAFESLKSAMSTIPVLALPDWSLPFMIETDA 900

Query: 963  SRMGVGAVLMQESRPIAYFNQALSTRARAKSIYERELMAMVLVMQKWRHYLLGSKFTVIS 1022
            S  G+GAVL Q S PIA+F+Q LSTRA+AKSIYERELMA+VL +QKWRHYLLG +FT++S
Sbjct: 901  SGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMS 960

Query: 1023 DQKALKFLIEQQEVQPQFQKWLTKLLEYDFEILYQPELQNKAADALSRMPTPTEIRVLTT 1082
            DQKALKFL+EQ+EVQPQFQKWLTKLL YDFEILYQP LQNKAADALSRM    E++ L+T
Sbjct: 961  DQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALST 1020

Query: 1083 TTLVDLEVVQQEVEMDKDLQNIIAKLKEDPDSVPKFSLERGRLLYKKR------------ 1142
            T +VD+EVV +EVE D++LQ +I +L+ +P    K+SL  G L+YK R            
Sbjct: 1021 TGIVDMEVVTKEVEKDEELQLLIQQLQNNPALEGKYSLTNGTLMYKGRVVLSKSSSIIPS 1080

Query: 1143 -----YRRPLG------RTYKRMTGELYWRGMKKDVKEYVESCVICQKNKSEAVSPAGLL 1202
                 +   LG      RTYKRM+GEL+W+GMK+D+K+YVE C ICQ+NKSEA  PAG+L
Sbjct: 1081 LLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVL 1140

Query: 1203 QPLPVPEKIWGDITMDFVEGLPKSQGKDSIMVVVDRLSKYGHFIALSHPYNAKQVAQVFV 1262
            QPLP+P++I  D TMDF+EGLPK+ G + IMVVVDRLSKY +F+ + HP++AKQVA  F+
Sbjct: 1141 QPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFI 1200

Query: 1263 REIA-------------------------------------------------------- 1287
             +I                                                         
Sbjct: 1201 DKIVRRHGIPKSIISDRDKIFVSNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLET 1260

[Close]

BLAST of Clc11G13365 vs. NCBI nr
Match: TYJ96663.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1147.9 bits (2968), Expect = 0.0e+00
Identity = 684/1499 (45.63%), Postives = 887/1499 (59.17%), Query Frame = 0


Query: 63   MAQKMAEERFEAHEKELTVLRDLVVATCKNVERMSEDLRTKNKEAEVEEGES-------- 122
            MAQ+  EER E  EKE+  L+++++   K+++R++++LR ++ + + E G S        
Sbjct: 1    MAQRQMEERLEGTEKEVLSLKEMMLEMKKSMDRLADELRDQSYKKKEESGTSDGSIMKMK 60

Query: 123  ---------SQGRNGGFNRSKYKKLNMPVFDGEGPDAWIFRAETFFEIHELGS------R 182
                      +      +RSKYKKL MP+F GE P++W++RAE FFEI+ L         
Sbjct: 61   GKMEETDVTGEIHTHQIDRSKYKKLEMPMFLGENPESWVYRAEHFFEINNLPEAEKVKVA 120

Query: 183  LVPLGKQPEADPKLEGDERENAGVMEIHARRDSHESVAGDKARGS-LCRLPPK------- 242
            +V  G+      +   + R+     ++  R        G K+ G+ L R+  +       
Sbjct: 121  VVSFGQDEVDWYRWSHNRRKVESWEDLKTRMFEFFRDTGQKSLGARLIRIQQEGSYSDYV 180

Query: 243  --------------ESVLVTAFLNGLHPSLKAEVMSRRLMGLDQCMLEAQSIDDRDIALK 302
                          ESVL  AFL GL P+L+AEVMSR    L+ CM+ AQ ++DR++ALK
Sbjct: 181  KKFVNYSAPLPHMAESVLRDAFLTGLEPALQAEVMSRHPQTLEDCMMAAQLVNDRNLALK 240

Query: 303  LALEEVKFQESDR-----------------KREQSPMTGVKPGAKGGLSKKRETPMRRLT 362
            LA  E+   E  R                 ++ +  M  +    KG   +K E P++RL+
Sbjct: 241  LAQAEMGIIEPKRSESVGNKVQWNNEKGMLRKNEFQMKQITIPLKGSY-QKGEPPVKRLS 300

Query: 363  DAKFKEKRDKEGLCF-----------------KELNVIIAGEVEELEDIQEEMEA----K 422
            DA+F+ + DK GLCF                 +EL + I  E E  E+  E  EA     
Sbjct: 301  DAEFRARLDK-GLCFRCNEKYSHGHRCKIKEKRELMLFILNEEESTEE-GEGSEAPNTEP 360

Query: 423  IEKKAMEVAENVQLALRSVYGFSAPRTMKMKGIVGGKEAIVLIDCGATHNFIHQKLADEL 482
            +E   +   E   +  R++   +   TMK++GIV GKE IVLID GATHNFIH +L  E 
Sbjct: 361  VEINQLGEPEETMIEYRAITSLTTKGTMKLRGIVKGKEVIVLIDSGATHNFIHHELVKER 420

Query: 483  NLQVAETLNYGIVVGNGKAIRGQGVCKSVMVMLQGITIVNDFLPLELGKMDVILGMAWLS 542
             + +     +GI +G+G + +G+G+C  V + L+G+ +V D L + LG +DV+LGM WL 
Sbjct: 421  KIPINRNTQFGITIGDGTSCKGEGICSKVEIQLEGLRVVTDLLVVGLGTIDVVLGMQWLD 480

Query: 543  TTGFIGVHWPSLTMTFAVGEDQVTLKGDPSLTKTEVSLKVLTKTWETEDQEYLVEIQNKE 602
            TTG + +HWPSLTM F    ++V LKGDP+L + E SLK L KTWE EDQ +L++ Q  E
Sbjct: 481  TTGTMKIHWPSLTMVFWKEGNKVVLKGDPALIRAECSLKTLEKTWEAEDQGFLLDWQRYE 540

Query: 603  AE-EGEDKEPTIAEPEEERLPVMIQSLLERNGDIFELSRGLPPKR-----------DAPI 662
             E E  D + T    +EE LP MIQ LL +  D+F+    LPPKR             PI
Sbjct: 541  IENEDADSKNTSHTGDEEGLP-MIQFLLHQYSDVFKSPTTLPPKRSIDHRILTLPGQKPI 600

Query: 663  NVRPYKYGHVQKDEIEKLVGEMLSTGIIRPSKSPFSSLVLLVKKKDGEWRFCVDYRKVNQ 722
            NVRPYKYGH QK+EIEKLV EML TGIIRPS SPFSS VLLVKKKDG WRFCVDYRK+N+
Sbjct: 601  NVRPYKYGHQQKEEIEKLVIEMLQTGIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNK 660

Query: 723  ATIAEKFPIPVIEEL---LHGASMFSKLDL-------------------RKHEGHYEFLV 782
             TIA+KFPIPVIEEL   LHGA++FSKLDL                   R HEGHYEF+V
Sbjct: 661  ITIADKFPIPVIEELLDELHGATVFSKLDLKSGYHQIRMREEDIEKTAFRTHEGHYEFVV 720

Query: 783  MPLGLINAPTTFLSLMNEVFKPFLRTFILVFFDDILVYSEDISTHETHLAVVFNVLRENK 842
            MP GL NAP TF SLMN+VFKPFLR  +LVFFDDILVYS DI+ HE HL +VF  LR+N+
Sbjct: 721  MPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDITEHEKHLGMVFATLRDNQ 780

Query: 843  LFANRKRCIFSQSRIQYLGHWVSKEGVEADGEKIKAMLQWPTPKNVTKLCSFLGLTGY-- 902
            L+ANRK+C+F+ S+I YLGH +SK GVEAD +K+K+MLQWP PK+VT L  FLGLTGY  
Sbjct: 781  LYANRKKCVFAHSQIHYLGHVISKHGVEADQDKVKSMLQWPKPKDVTGLRGFLGLTGYYR 840

Query: 903  -------------TDGVQ-HAKECDVHTTRA--------------SLTKLCFTLHHETDA 962
                         T  +Q +A + D + T A              +L         ETDA
Sbjct: 841  RFVKGYGEIAAPLTKLLQKNAFKWDENATLAFESLKSAMSTIPVLALPDWSLPFMIETDA 900

Query: 963  SRMGVGAVLMQESRPIAYFNQALSTRARAKSIYERELMAMVLVMQKWRHYLLGSKFTVIS 1022
            S  G+GAVL Q S PIA+F+Q LSTRA+AKSIYERELMA+VL +QKWRHYLLG +FT++S
Sbjct: 901  SGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMS 960

Query: 1023 DQKALKFLIEQQEVQPQFQKWLTKLLEYDFEILYQPELQNKAADALSRMPTPTEIRVLTT 1082
            DQKALKFL+EQ+EVQPQFQKWLTKLL YDFEILYQP LQNKAADALSRM    E++ L+T
Sbjct: 961  DQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALST 1020

Query: 1083 TTLVDLEVVQQEVEMDKDLQNIIAKLKEDPDSVPKFSLERGRLLYKKR------------ 1142
            T +VD+EVV +EVE D++LQ +I +L+ +P    K+SL  G L+YK R            
Sbjct: 1021 TGIVDMEVVTKEVEKDEELQLLIQQLQNNPALEGKYSLTNGTLMYKGRVVLSKSSSIIPS 1080

Query: 1143 -----YRRPLG------RTYKRMTGELYWRGMKKDVKEYVESCVICQKNKSEAVSPAGLL 1202
                 +   LG      RTYKRM+GEL+W+GMK+D+K+YVE C ICQ+NKSEA  PAG+L
Sbjct: 1081 LLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVL 1140

Query: 1203 QPLPVPEKIWGDITMDFVEGLPKSQGKDSIMVVVDRLSKYGHFIALSHPYNAKQVAQVFV 1262
            QPLP+P++I  D TMDF+EGLPK+ G + IMVVVDRLSKY +F+ + HP++AKQVA  F+
Sbjct: 1141 QPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFI 1200

Query: 1263 REIA-------------------------------------------------------- 1287
             +I                                                         
Sbjct: 1201 DKIVRRHGIPKSIISDRDKIFVSNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLET 1260

[Close]

BLAST of Clc11G13365 vs. NCBI nr
Match: TYK27058.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1147.9 bits (2968), Expect = 0.0e+00
Identity = 684/1499 (45.63%), Postives = 887/1499 (59.17%), Query Frame = 0


Query: 63   MAQKMAEERFEAHEKELTVLRDLVVATCKNVERMSEDLRTKNKEAEVEEGES-------- 122
            MAQ+  EER E  EKE+  L+++++   K+++R++++LR ++ + + E G S        
Sbjct: 1    MAQRQMEERLEGTEKEVLSLKEMMLEMKKSMDRLADELRDQSYKKKEESGTSDGSIMKMK 60

Query: 123  ---------SQGRNGGFNRSKYKKLNMPVFDGEGPDAWIFRAETFFEIHELGS------R 182
                      +      +RSKYKKL MP+F GE P++W++RAE FFEI+ L         
Sbjct: 61   GKMEETDVTGEIHTHQIDRSKYKKLEMPMFLGENPESWVYRAEHFFEINNLPEAEKVKVA 120

Query: 183  LVPLGKQPEADPKLEGDERENAGVMEIHARRDSHESVAGDKARGS-LCRLPPK------- 242
            +V  G+      +   + R+     ++  R        G K+ G+ L R+  +       
Sbjct: 121  VVSFGQDEVDWYRWSHNRRKVESWEDLKTRMFEFFRDTGQKSLGARLIRIQQEGSYSDYV 180

Query: 243  --------------ESVLVTAFLNGLHPSLKAEVMSRRLMGLDQCMLEAQSIDDRDIALK 302
                          ESVL  AFL GL P+L+AEVMSR    L+ CM+ AQ ++DR++ALK
Sbjct: 181  KKFVNYSAPLPHMAESVLRDAFLTGLEPALQAEVMSRHPQTLEDCMMAAQLVNDRNLALK 240

Query: 303  LALEEVKFQESDR-----------------KREQSPMTGVKPGAKGGLSKKRETPMRRLT 362
            LA  E+   E  R                 ++ +  M  +    KG   +K E P++RL+
Sbjct: 241  LAQAEMGIIEPKRSESVGNKVQWNNEKGMLRKNEFQMKQITIPLKGSY-QKGEPPVKRLS 300

Query: 363  DAKFKEKRDKEGLCF-----------------KELNVIIAGEVEELEDIQEEMEA----K 422
            DA+F+ + DK GLCF                 +EL + I  E E  E+  E  EA     
Sbjct: 301  DAEFRARLDK-GLCFRCNEKYSHGHRCKIKEKRELMLFILNEEESTEE-GEGSEAPNTEP 360

Query: 423  IEKKAMEVAENVQLALRSVYGFSAPRTMKMKGIVGGKEAIVLIDCGATHNFIHQKLADEL 482
            +E   +   E   +  R++   +   TMK++GIV GKE IVLID GATHNFIH +L  E 
Sbjct: 361  VEINQLGEPEETMIEYRAITSLTTKGTMKLRGIVKGKEVIVLIDSGATHNFIHHELVKER 420

Query: 483  NLQVAETLNYGIVVGNGKAIRGQGVCKSVMVMLQGITIVNDFLPLELGKMDVILGMAWLS 542
             + +     +GI +G+G + +G+G+C  V + L+G+ +V D L + LG +DV+LGM WL 
Sbjct: 421  KIPINRNTQFGITIGDGTSCKGEGICSKVEIQLEGLRVVTDLLVVGLGTIDVVLGMQWLD 480

Query: 543  TTGFIGVHWPSLTMTFAVGEDQVTLKGDPSLTKTEVSLKVLTKTWETEDQEYLVEIQNKE 602
            TTG + +HWPSLTM F    ++V LKGDP+L + E SLK L KTWE EDQ +L++ Q  E
Sbjct: 481  TTGTMKIHWPSLTMVFWKEGNKVVLKGDPALIRAECSLKTLEKTWEAEDQGFLLDWQRYE 540

Query: 603  AE-EGEDKEPTIAEPEEERLPVMIQSLLERNGDIFELSRGLPPKR-----------DAPI 662
             E E  D + T    +EE LP MIQ LL +  D+F+    LPPKR             PI
Sbjct: 541  IENEDADSKNTSHTGDEEGLP-MIQFLLHQYSDVFKSPTTLPPKRSIDHRILTLPGQKPI 600

Query: 663  NVRPYKYGHVQKDEIEKLVGEMLSTGIIRPSKSPFSSLVLLVKKKDGEWRFCVDYRKVNQ 722
            NVRPYKYGH QK+EIEKLV EML TGIIRPS SPFSS VLLVKKKDG WRFCVDYRK+N+
Sbjct: 601  NVRPYKYGHQQKEEIEKLVIEMLQTGIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNK 660

Query: 723  ATIAEKFPIPVIEEL---LHGASMFSKLDL-------------------RKHEGHYEFLV 782
             TIA+KFPIPVIEEL   LHGA++FSKLDL                   R HEGHYEF+V
Sbjct: 661  ITIADKFPIPVIEELLDELHGATVFSKLDLKSGYHQIRMREEDIEKTAFRTHEGHYEFVV 720

Query: 783  MPLGLINAPTTFLSLMNEVFKPFLRTFILVFFDDILVYSEDISTHETHLAVVFNVLRENK 842
            MP GL NAP TF SLMN+VFKPFLR  +LVFFDDILVYS DI+ HE HL +VF  LR+N+
Sbjct: 721  MPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDITEHEKHLGMVFATLRDNQ 780

Query: 843  LFANRKRCIFSQSRIQYLGHWVSKEGVEADGEKIKAMLQWPTPKNVTKLCSFLGLTGY-- 902
            L+ANRK+C+F+ S+I YLGH +SK GVEAD +K+K+MLQWP PK+VT L  FLGLTGY  
Sbjct: 781  LYANRKKCVFAHSQIHYLGHVISKHGVEADQDKVKSMLQWPKPKDVTGLRGFLGLTGYYR 840

Query: 903  -------------TDGVQ-HAKECDVHTTRA--------------SLTKLCFTLHHETDA 962
                         T  +Q +A + D + T A              +L         ETDA
Sbjct: 841  RFVKGYGEIAAPLTKLLQKNAFKWDENATLAFESLKSAMSTIPVLALPDWSLPFMIETDA 900

Query: 963  SRMGVGAVLMQESRPIAYFNQALSTRARAKSIYERELMAMVLVMQKWRHYLLGSKFTVIS 1022
            S  G+GAVL Q S PIA+F+Q LSTRA+AKSIYERELMA+VL +QKWRHYLLG +FT++S
Sbjct: 901  SGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMS 960

Query: 1023 DQKALKFLIEQQEVQPQFQKWLTKLLEYDFEILYQPELQNKAADALSRMPTPTEIRVLTT 1082
            DQKALKFL+EQ+EVQPQFQKWLTKLL YDFEILYQP LQNKAADALSRM    E++ L+T
Sbjct: 961  DQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALST 1020

Query: 1083 TTLVDLEVVQQEVEMDKDLQNIIAKLKEDPDSVPKFSLERGRLLYKKR------------ 1142
            T +VD+EVV +EVE D++LQ +I +L+ +P    K+SL  G L+YK R            
Sbjct: 1021 TGIVDMEVVTKEVEKDEELQLLIQQLQNNPALEGKYSLTNGTLMYKGRVVLSKSSSIIPS 1080

Query: 1143 -----YRRPLG------RTYKRMTGELYWRGMKKDVKEYVESCVICQKNKSEAVSPAGLL 1202
                 +   LG      RTYKRM+GEL+W+GMK+D+K+YVE C ICQ+NKSEA  PAG+L
Sbjct: 1081 LLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVL 1140

Query: 1203 QPLPVPEKIWGDITMDFVEGLPKSQGKDSIMVVVDRLSKYGHFIALSHPYNAKQVAQVFV 1262
            QPLP+P++I  D TMDF+EGLPK+ G + IMVVVDRLSKY +F+ + HP++AKQVA  F+
Sbjct: 1141 QPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFI 1200

Query: 1263 REIA-------------------------------------------------------- 1287
             +I                                                         
Sbjct: 1201 DKIVRRHGIPKSIISDRDKIFVSNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLET 1260

[Close]

BLAST of Clc11G13365 vs. NCBI nr
Match: KAA0059481.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1147.5 bits (2967), Expect = 0.0e+00
Identity = 687/1499 (45.83%), Postives = 884/1499 (58.97%), Query Frame = 0


Query: 63   MAQKMAEERFEAHEKELTVLRDLVVATCKNVERMSEDLRTKNKEAEVEEGES-------- 122
            MAQ+  EER E  EKE+  L+++++   K+++R++++LR ++ + + E G S        
Sbjct: 1    MAQRQMEERLEGTEKEVLSLKEMMLEMKKSMDRLADELRDQSYKKKEESGTSDGSIMKMK 60

Query: 123  ---------SQGRNGGFNRSKYKKLNMPVFDGEGPDAWIFRAETFFEIHELGS------R 182
                      +      +RSKYKKL MP+F GE P++W++RAE FFEI+ L         
Sbjct: 61   GKMEETDVTGEIHTHQIDRSKYKKLEMPMFLGENPESWVYRAEHFFEINNLPEAEKVKVA 120

Query: 183  LVPLGKQPEAD--------PKLEGDE--------------RENAGVMEIHARRDSHESVA 242
            +V  G Q E D         K+E  E              + + G   I  +++   S  
Sbjct: 121  VVSFG-QDEVDWYRWSHNRRKVESWEDLKTRMFEFFRDTGQRSLGARLIRIQQEGSYSDY 180

Query: 243  GDKARGSLCRLP-PKESVLVTAFLNGLHPSLKAEVMSRRLMGLDQCMLEAQSIDDRDIAL 302
              K       LP   ESVL  AFL GL P+L+AEVMSR    L+ CM+ AQ ++DR++AL
Sbjct: 181  VKKFVNYSAPLPHMAESVLRDAFLTGLEPALQAEVMSRHPQTLEDCMMAAQLVNDRNLAL 240

Query: 303  KLALEEVKFQESDR-----------------KREQSPMTGVKPGAKGGLSKKRETPMRRL 362
            KLA  E+   E  R                 ++ +  M  +    KG   +K E P++RL
Sbjct: 241  KLAQAEMGIIEPKRSESAGNKVQWNNDKGMMRKNEFQMKQITIPLKGSY-QKGEPPVKRL 300

Query: 363  TDAKFKEKRDKEGLCF-----------------KELNVIIAGE---VEELEDIQEEMEAK 422
            +DA+F+ + DK GLCF                 +EL + I  E   +EE E  +      
Sbjct: 301  SDAEFRARLDK-GLCFRCNEKYSHGHRCKIKEKRELMLFILNEEESIEEGEGSEAPNTGP 360

Query: 423  IEKKAMEVAENVQLALRSVYGFSAPRTMKMKGIVGGKEAIVLIDCGATHNFIHQKLADEL 482
            +E   +E  E   +  R++   +   TMK++GIV GKE IVLID GATHNFIH +L  E 
Sbjct: 361  VEINQLEEPEETMIEYRAITSLTTKGTMKLRGIVKGKEVIVLIDSGATHNFIHHELVTER 420

Query: 483  NLQVAETLNYGIVVGNGKAIRGQGVCKSVMVMLQGITIVNDFLPLELGKMDVILGMAWLS 542
             + +     +GI +G+G + +G+G+C  V + L+G+ +V D L + LG +DV+LGM WL 
Sbjct: 421  KIPINRNTQFGITIGDGTSCKGEGICSKVEIQLEGLRVVTDLLVVGLGTIDVVLGMQWLD 480

Query: 543  TTGFIGVHWPSLTMTFAVGEDQVTLKGDPSLTKTEVSLKVLTKTWETEDQEYLVEIQNKE 602
            TTG + +HWPSLTM F    ++V LKGDP+L + E SLK L KTWE EDQ +L++ Q  E
Sbjct: 481  TTGTMKIHWPSLTMVFWKEGNKVVLKGDPALIRAECSLKTLEKTWEAEDQGFLLDWQRYE 540

Query: 603  AE-EGEDKEPTIAEPEEERLPVMIQSLLERNGDIFELSRGLPPKR-----------DAPI 662
             E E  D + T    +EE LP MIQ LL +  D+F     LPPKR             PI
Sbjct: 541  IENEDADSKNTSQTGDEEGLP-MIQFLLHQYSDVFNSPTTLPPKRIIDHRILTLPGQKPI 600

Query: 663  NVRPYKYGHVQKDEIEKLVGEMLSTGIIRPSKSPFSSLVLLVKKKDGEWRFCVDYRKVNQ 722
            NVRPYKYGH QK+EIEKLV EML TGIIRPS SPFSS VLLVKKKDG WRFCVDYRK+N+
Sbjct: 601  NVRPYKYGHQQKEEIEKLVIEMLQTGIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNK 660

Query: 723  ATIAEKFPIPVIEEL---LHGASMFSKLDL-------------------RKHEGHYEFLV 782
             TIA+KFPIPVIEEL   LHGA++FSKLDL                   R HEGHYEF+V
Sbjct: 661  ITIADKFPIPVIEELLDELHGATVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFVV 720

Query: 783  MPLGLINAPTTFLSLMNEVFKPFLRTFILVFFDDILVYSEDISTHETHLAVVFNVLRENK 842
            MP GL NAP TF S MN+VFKPFLR  +LVFFDDILVYS DI+ HE HL +VF  LR+N+
Sbjct: 721  MPFGLTNAPATFQSHMNQVFKPFLRRCVLVFFDDILVYSSDITEHEKHLGMVFATLRDNQ 780

Query: 843  LFANRKRCIFSQSRIQYLGHWVSKEGVEADGEKIKAMLQWPTPKNVTKLCSFLGLTGY-- 902
            L+ANRK+C+F+ S+I YLGH +SK GVEAD +K+K MLQWP PK+VT L  FLGLTGY  
Sbjct: 781  LYANRKKCVFAHSQIHYLGHVISKHGVEADRDKVKCMLQWPKPKDVTGLRGFLGLTGYYR 840

Query: 903  -------------TDGVQ-HAKECDVHTTRA--------------SLTKLCFTLHHETDA 962
                         T  +Q +A + D + T A              +L         ETDA
Sbjct: 841  PFVKSYGEIAAPLTKLLQKNAFKLDENATLAFESLKSAMSTIPVLTLPDWSLPFMIETDA 900

Query: 963  SRMGVGAVLMQESRPIAYFNQALSTRARAKSIYERELMAMVLVMQKWRHYLLGSKFTVIS 1022
            S  GVGAVL Q S PIA+F+Q LSTRA+AKSIYERELMA+VL +QKWRHYLLG +FT++S
Sbjct: 901  SGSGVGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMS 960

Query: 1023 DQKALKFLIEQQEVQPQFQKWLTKLLEYDFEILYQPELQNKAADALSRMPTPTEIRVLTT 1082
            DQKALKFL+EQ+EVQPQFQKWLTKLL YDFEILYQP LQNKAADALSRM    E++ L+T
Sbjct: 961  DQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALST 1020

Query: 1083 TTLVDLEVVQQEVEMDKDLQNIIAKLKEDPDSVPKFSLERGRLLYKKR------------ 1142
            T +VD+EVV +EVE D++LQ +I +L+ +P    K+SL  G L+YK R            
Sbjct: 1021 TGIVDMEVVTKEVEKDEELQLLIQQLQTNPALEGKYSLTNGTLMYKGRVVLSKSSSIIPS 1080

Query: 1143 -----YRRPLG------RTYKRMTGELYWRGMKKDVKEYVESCVICQKNKSEAVSPAGLL 1202
                 +   LG      RTYKRM+GEL+W+GMK+D+K+YVE C ICQ+NKSEA  PAG+L
Sbjct: 1081 LLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVL 1140

Query: 1203 QPLPVPEKIWGDITMDFVEGLPKSQGKDSIMVVVDRLSKYGHFIALSHPYNAKQVAQVFV 1262
            QPLP+P++I  D TMDF+EGLPK+ G + IMVVVDRLSKY +F+ + HP++AKQV   F+
Sbjct: 1141 QPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVTMEFI 1200

Query: 1263 REIA-------------------------------------------------------- 1287
             +I                                                         
Sbjct: 1201 DKIVRRHGIPKSIISDRDKIFVSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLET 1260

[Close]

BLAST of Clc11G13365 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 262.7 bits (670), Expect = 2.3e-68
Identity = 238/875 (27.20%), Postives = 365/875 (41.71%), Query Frame = 0


Query: 559  LPPKRDAPI-------NVRPYKYGHVQKDEIEKLVGEMLSTGIIRPSKSPFSSLVLLVKK 618
            +P K D  I        ++PY      + EI K+V ++L    I PSKSP SS V+LV K
Sbjct: 582  IPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPK 641

Query: 619  KDGEWRFCVDYRKVNQATIAEKFPIPVIEELLH---GASMFSKLDLRK--HE-------- 678
            KDG +R CVDYR +N+ATI++ FP+P I+ LL     A +F+ LDL    H+        
Sbjct: 642  KDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDR 701

Query: 679  ---------GHYEFLVMPLGLINAPTTFLSLMNEVFKPFLRTFILVFFDDILVYSEDIST 738
                     G YE+ VMP GL+NAP+TF   M + F+     F+ V+ DDIL++SE    
Sbjct: 702  YKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEE 761

Query: 739  HETHLAVVFNVLRENKLFANRKRCIFSQSRIQYLGHWVSKEGVEADGEKIKAMLQWPTPK 798
            H  HL  V   L+   L   +K+C F+    ++LG+ +  + +     K  A+  +PTPK
Sbjct: 762  HWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPK 821

Query: 799  NVTKLCSFLGLTGY-------------------TDGVQHAKECDVHTTRASLTKLC---- 858
             V +   FLG+  Y                    D  Q  ++ D    +     LC    
Sbjct: 822  TVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQWTEKQDKAIDKLK-DALCNSPV 881

Query: 859  -------FTLHHETDASRMGVGAVLMQESRP------IAYFNQALSTRARAKSIYERELM 918
                         TDAS+ G+GAVL +          + YF+++L +  +     E EL+
Sbjct: 882  LVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAGELELL 941

Query: 919  AMVLVMQKWRHYLLGSKFTVISDQKALKFLIEQQEVQPQFQKWLTKLLEYDFEILYQPEL 978
             ++  +  +R+ L G  FT+ +D  +L  L  + E   + Q+WL  L  YDF + Y    
Sbjct: 942  GIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLEYLAGP 1001

Query: 979  QNKAADALSRMP---TPTEIRVLTT--------------TTLVDLEVVQQEVEMDKDL-- 1038
            +N  ADA+SR     TP   R + T                L+ ++ + Q     +D+  
Sbjct: 1002 KNVVADAISRAVYTITPETSRPIDTESWKSYYKSDPLCSAVLIHMKELTQHNVTPEDMSA 1061

Query: 1039 -QNIIAKLKEDPDSVPKFSLERGRLLYKKRYRRPLGR----------------------T 1098
             ++   KL+        +SLE   + Y+ R   P+ +                      T
Sbjct: 1062 FRSYQKKLELSETFRKNYSLEDEMIYYQDRLVVPIKQQNAVMRLYHDHTLFGGHFGVTVT 1121

Query: 1099 YKRMTGELYWRGMKKDVKEYVESCVICQKNKSEAVSPAGLLQPLPVPEKIWGDITMDFVE 1158
              +++   YW  ++  + +Y+ +CV CQ  KS      GLLQPLP+ E  W DI+MDFV 
Sbjct: 1122 LAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDFVT 1181

Query: 1159 GL-PKSQGKDSIMVVVDRLSKYGHFIALSHPYNAKQVAQVFVREI--------------- 1218
            GL P S   + I+VVVDR SK  HFIA     +A Q+  +  R I               
Sbjct: 1182 GLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFRYIFSYHGFPRTITSDRD 1241

Query: 1219 -----------------------------------------------------AWYGWLP 1239
                                                                  W+ +LP
Sbjct: 1242 VRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYASTNIQNWHVYLP 1301

[Close]

BLAST of Clc11G13365 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 261.9 bits (668), Expect = 3.9e-68
Identity = 236/868 (27.19%), Postives = 365/868 (42.05%), Query Frame = 0


Query: 559  LPPKRDAPI-------NVRPYKYGHVQKDEIEKLVGEMLSTGIIRPSKSPFSSLVLLVKK 618
            +P K D  I        ++PY      + EI K+V ++L    I PSKSP SS V+LV K
Sbjct: 608  IPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPK 667

Query: 619  KDGEWRFCVDYRKVNQATIAEKFPIPVIEELLH---GASMFSKLDLRK--HE-------- 678
            KDG +R CVDYR +N+ATI++ FP+P I+ LL     A +F+ LDL    H+        
Sbjct: 668  KDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDR 727

Query: 679  ---------GHYEFLVMPLGLINAPTTFLSLMNEVFKPFLRTFILVFFDDILVYSEDIST 738
                     G YE+ VMP GL+NAP+TF   M + F+     F+ V+ DDIL++SE    
Sbjct: 728  YKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEE 787

Query: 739  HETHLAVVFNVLRENKLFANRKRCIFSQSRIQYLGHWVSKEGVEADGEKIKAMLQWPTPK 798
            H  HL  V   L+   L   +K+C F+    ++LG+ +  + +     K  A+  +PTPK
Sbjct: 788  HWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPK 847

Query: 799  NVTKLCSFLGLTGY-------------------TDGVQHAKECD--VHTTRASL------ 858
             V +   FLG+  Y                    D  Q  ++ D  +   +A+L      
Sbjct: 848  TVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQWTEKQDKAIEKLKAALCNSPVL 907

Query: 859  ----TKLCFTLHHETDASRMGVGAVLMQESRP------IAYFNQALSTRARAKSIYEREL 918
                 K  + L   TDAS+ G+GAVL +          + YF+++L +  +     E EL
Sbjct: 908  VPFNNKANYRL--TTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAGELEL 967

Query: 919  MAMVLVMQKWRHYLLGSKFTVISDQKALKFLIEQQEVQPQFQKWLTKLLEYDFEILYQPE 978
            + ++  +  +R+ L G  FT+ +D  +L  L  + E   + Q+WL  L  YDF + Y   
Sbjct: 968  LGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLEYLAG 1027

Query: 979  LQNKAADALSR---MPTPTEIRVLTT--------------TTLVDLEVVQQEVEMDKDL- 1038
             +N  ADA+SR     TP   R + T                L+ ++ + Q     +D+ 
Sbjct: 1028 PKNVVADAISRAIYTITPETSRPIDTESWKSYYKSDPLCSAVLIHMKELTQHNVTPEDMS 1087

Query: 1039 --QNIIAKLKEDPDSVPKFSLERGRLLYKKRYRRPLGR---------------------- 1098
              ++   KL+        +SLE   + Y+ R   P+ +                      
Sbjct: 1088 AFRSYQKKLELSETFRKNYSLEDEMIYYQDRLVVPIKQQNAVMRLYHDHTLFGGHFGVTV 1147

Query: 1099 TYKRMTGELYWRGMKKDVKEYVESCVICQKNKSEAVSPAGLLQPLPVPEKIWGDITMDFV 1158
            T  +++   YW  ++  + +Y+ +CV CQ  KS      GLLQPLP+ E  W DI+MDFV
Sbjct: 1148 TLAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDFV 1207

Query: 1159 EGL-PKSQGKDSIMVVVDRLSKYGHFIALSHPYNAKQVAQVFVREI-------------- 1218
             GL P S   + I+VVVDR SK  HFIA     +A Q+  +  R I              
Sbjct: 1208 TGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFRYIFSYHGFPRTITSDR 1267

Query: 1219 ------------------------------------------------------AWYGWL 1232
                                                                   W+ +L
Sbjct: 1268 DVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYVSTNIQNWHVYL 1327

[Close]

BLAST of Clc11G13365 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 2.8e-66
Identity = 227/883 (25.71%), Postives = 376/883 (42.58%), Query Frame = 0


Query: 531  AEPEEERLPVMIQSLLERNGDIFELSRGLPPKRDAPINVRPYKYGHVQKDEIEKLVGEML 590
            AE   E+LP  I+  LE   ++ + +  LP        +R Y     +   +   + + L
Sbjct: 386  AETNTEKLPKPIKG-LEFEVELTQENYRLP--------IRNYPLPPGKMQAMNDEINQGL 445

Query: 591  STGIIRPSKSPFSSLVLLVKKKDGEWRFCVDYRKVNQATIAEKFPIPVIEELL---HGAS 650
             +GIIR SK+  +  V+ V KK+G  R  VDY+ +N+      +P+P+IE+LL    G++
Sbjct: 446  KSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGST 505

Query: 651  MFSKLDL---------RKHEGH----------YEFLVMPLGLINAPTTFLSLMNEVFKPF 710
            +F+KLDL         RK + H          +E+LVMP G+  AP  F   +N +    
Sbjct: 506  IFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEA 565

Query: 711  LRTFILVFFDDILVYSEDISTHETHLAVVFNVLRENKLFANRKRCIFSQSRIQYLGHWVS 770
              + ++ + DDIL++S+  S H  H+  V   L+   L  N+ +C F QS+++++G+ +S
Sbjct: 566  KESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHIS 625

Query: 771  KEGVEADGEKIKAMLQWPTPKNVTKLCSFLGLTGY------------------------- 830
            ++G     E I  +LQW  PKN  +L  FLG   Y                         
Sbjct: 626  EKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRW 685

Query: 831  ------TDGVQHAKECDVHTTRASLTKLCFTLHHETDASRMGVGAVLMQES-----RPIA 890
                  T  +++ K+C V             +  ETDAS + VGAVL Q+       P+ 
Sbjct: 686  KWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVG 745

Query: 891  YFNQALSTRARAKSIYERELMAMVLVMQKWRHYLLGS--KFTVISDQKAL--KFLIEQQE 950
            Y++  +S      S+ ++E++A++  ++ WRHYL  +   F +++D + L  +   E + 
Sbjct: 746  YYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEP 805

Query: 951  VQPQFQKWLTKLLEYDFEILYQPELQNKAADALSRMPTPTE----------IRVLTTTTL 1010
               +  +W   L +++FEI Y+P   N  ADALSR+   TE          I  +   ++
Sbjct: 806  ENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISI 865

Query: 1011 VDLEVVQQEVEMDKDLQNIIAKLKEDPDSVPKFSLERGRLLYKK---------RYRRPLG 1070
             D    Q   E   D + +     ED        L+ G L+  K         +  R + 
Sbjct: 866  TDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTII 925

Query: 1071 RTYKR---------------MTGELYWRGMKKDVKEYVESCVICQKNKSEAVSPAGLLQP 1130
            + Y                 +     W+G++K ++EYV++C  CQ NKS    P G LQP
Sbjct: 926  KKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQP 985

Query: 1131 LPVPEKIWGDITMDFVEGLPKSQGKDSIMVVVDRLSKYGHFIALSHPYNAKQVAQVF-VR 1190
            +P  E+ W  ++MDF+  LP+S G +++ VVVDR SK    +  +    A+Q A++F  R
Sbjct: 986  IPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQR 1045

Query: 1191 EIAWYG-----------------W--------------LPW------------------- 1234
             IA++G                 W              LP+                   
Sbjct: 1046 VIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLL 1105

[Close]

BLAST of Clc11G13365 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 2.8e-66
Identity = 227/883 (25.71%), Postives = 376/883 (42.58%), Query Frame = 0


Query: 531  AEPEEERLPVMIQSLLERNGDIFELSRGLPPKRDAPINVRPYKYGHVQKDEIEKLVGEML 590
            AE   E+LP  I+  LE   ++ + +  LP        +R Y     +   +   + + L
Sbjct: 386  AETNTEKLPKPIKG-LEFEVELTQENYRLP--------IRNYPLPPGKMQAMNDEINQGL 445

Query: 591  STGIIRPSKSPFSSLVLLVKKKDGEWRFCVDYRKVNQATIAEKFPIPVIEELL---HGAS 650
             +GIIR SK+  +  V+ V KK+G  R  VDY+ +N+      +P+P+IE+LL    G++
Sbjct: 446  KSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGST 505

Query: 651  MFSKLDL---------RKHEGH----------YEFLVMPLGLINAPTTFLSLMNEVFKPF 710
            +F+KLDL         RK + H          +E+LVMP G+  AP  F   +N +    
Sbjct: 506  IFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEA 565

Query: 711  LRTFILVFFDDILVYSEDISTHETHLAVVFNVLRENKLFANRKRCIFSQSRIQYLGHWVS 770
              + ++ + DDIL++S+  S H  H+  V   L+   L  N+ +C F QS+++++G+ +S
Sbjct: 566  KESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHIS 625

Query: 771  KEGVEADGEKIKAMLQWPTPKNVTKLCSFLGLTGY------------------------- 830
            ++G     E I  +LQW  PKN  +L  FLG   Y                         
Sbjct: 626  EKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRW 685

Query: 831  ------TDGVQHAKECDVHTTRASLTKLCFTLHHETDASRMGVGAVLMQES-----RPIA 890
                  T  +++ K+C V             +  ETDAS + VGAVL Q+       P+ 
Sbjct: 686  KWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVG 745

Query: 891  YFNQALSTRARAKSIYERELMAMVLVMQKWRHYLLGS--KFTVISDQKAL--KFLIEQQE 950
            Y++  +S      S+ ++E++A++  ++ WRHYL  +   F +++D + L  +   E + 
Sbjct: 746  YYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEP 805

Query: 951  VQPQFQKWLTKLLEYDFEILYQPELQNKAADALSRMPTPTE----------IRVLTTTTL 1010
               +  +W   L +++FEI Y+P   N  ADALSR+   TE          I  +   ++
Sbjct: 806  ENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISI 865

Query: 1011 VDLEVVQQEVEMDKDLQNIIAKLKEDPDSVPKFSLERGRLLYKK---------RYRRPLG 1070
             D    Q   E   D + +     ED        L+ G L+  K         +  R + 
Sbjct: 866  TDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTII 925

Query: 1071 RTYKR---------------MTGELYWRGMKKDVKEYVESCVICQKNKSEAVSPAGLLQP 1130
            + Y                 +     W+G++K ++EYV++C  CQ NKS    P G LQP
Sbjct: 926  KKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQP 985

Query: 1131 LPVPEKIWGDITMDFVEGLPKSQGKDSIMVVVDRLSKYGHFIALSHPYNAKQVAQVF-VR 1190
            +P  E+ W  ++MDF+  LP+S G +++ VVVDR SK    +  +    A+Q A++F  R
Sbjct: 986  IPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQR 1045

Query: 1191 EIAWYG-----------------W--------------LPW------------------- 1234
             IA++G                 W              LP+                   
Sbjct: 1046 VIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLL 1105

[Close]

BLAST of Clc11G13365 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 2.8e-66
Identity = 227/883 (25.71%), Postives = 376/883 (42.58%), Query Frame = 0


Query: 531  AEPEEERLPVMIQSLLERNGDIFELSRGLPPKRDAPINVRPYKYGHVQKDEIEKLVGEML 590
            AE   E+LP  I+  LE   ++ + +  LP        +R Y     +   +   + + L
Sbjct: 386  AETNTEKLPKPIKG-LEFEVELTQENYRLP--------IRNYPLPPGKMQAMNDEINQGL 445

Query: 591  STGIIRPSKSPFSSLVLLVKKKDGEWRFCVDYRKVNQATIAEKFPIPVIEELL---HGAS 650
             +GIIR SK+  +  V+ V KK+G  R  VDY+ +N+      +P+P+IE+LL    G++
Sbjct: 446  KSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGST 505

Query: 651  MFSKLDL---------RKHEGH----------YEFLVMPLGLINAPTTFLSLMNEVFKPF 710
            +F+KLDL         RK + H          +E+LVMP G+  AP  F   +N +    
Sbjct: 506  IFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEA 565

Query: 711  LRTFILVFFDDILVYSEDISTHETHLAVVFNVLRENKLFANRKRCIFSQSRIQYLGHWVS 770
              + ++ + DDIL++S+  S H  H+  V   L+   L  N+ +C F QS+++++G+ +S
Sbjct: 566  KESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHIS 625

Query: 771  KEGVEADGEKIKAMLQWPTPKNVTKLCSFLGLTGY------------------------- 830
            ++G     E I  +LQW  PKN  +L  FLG   Y                         
Sbjct: 626  EKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRW 685

Query: 831  ------TDGVQHAKECDVHTTRASLTKLCFTLHHETDASRMGVGAVLMQES-----RPIA 890
                  T  +++ K+C V             +  ETDAS + VGAVL Q+       P+ 
Sbjct: 686  KWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVG 745

Query: 891  YFNQALSTRARAKSIYERELMAMVLVMQKWRHYLLGS--KFTVISDQKAL--KFLIEQQE 950
            Y++  +S      S+ ++E++A++  ++ WRHYL  +   F +++D + L  +   E + 
Sbjct: 746  YYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEP 805

Query: 951  VQPQFQKWLTKLLEYDFEILYQPELQNKAADALSRMPTPTE----------IRVLTTTTL 1010
               +  +W   L +++FEI Y+P   N  ADALSR+   TE          I  +   ++
Sbjct: 806  ENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISI 865

Query: 1011 VDLEVVQQEVEMDKDLQNIIAKLKEDPDSVPKFSLERGRLLYKK---------RYRRPLG 1070
             D    Q   E   D + +     ED        L+ G L+  K         +  R + 
Sbjct: 866  TDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTII 925

Query: 1071 RTYKR---------------MTGELYWRGMKKDVKEYVESCVICQKNKSEAVSPAGLLQP 1130
            + Y                 +     W+G++K ++EYV++C  CQ NKS    P G LQP
Sbjct: 926  KKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQP 985

Query: 1131 LPVPEKIWGDITMDFVEGLPKSQGKDSIMVVVDRLSKYGHFIALSHPYNAKQVAQVF-VR 1190
            +P  E+ W  ++MDF+  LP+S G +++ VVVDR SK    +  +    A+Q A++F  R
Sbjct: 986  IPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQR 1045

Query: 1191 EIAWYG-----------------W--------------LPW------------------- 1234
             IA++G                 W              LP+                   
Sbjct: 1046 VIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLL 1105

[Close]

BLAST of Clc11G13365 vs. ExPASy TrEMBL
Match: A0A5D3E325 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00690 PE=4 SV=1)

HSP 1 Score: 1149.8 bits (2973), Expect = 0.0e+00
Identity = 688/1499 (45.90%), Postives = 886/1499 (59.11%), Query Frame = 0


Query: 63   MAQKMAEERFEAHEKELTVLRDLVVATCKNVERMSEDLRTKNKEAEVEEGES-------- 122
            MAQ+  EER E  EKE+  L+++++   K+++R++++LR ++ + + E G S        
Sbjct: 1    MAQRQMEERLEGTEKEVLSLKEMMLEMKKSMDRLADELRDQSYKKKEESGTSDGSIMKMK 60

Query: 123  ---------SQGRNGGFNRSKYKKLNMPVFDGEGPDAWIFRAETFFEIHELGS------R 182
                      +      +RSKYKKL MP+F GE P++W++RAE FFEI+ L         
Sbjct: 61   GKMEETDVTGEIHTHQIDRSKYKKLEMPMFLGENPESWVYRAEHFFEINNLPEAEKVKVA 120

Query: 183  LVPLGKQPEAD--------PKLEGDE--------------RENAGVMEIHARRDSHESVA 242
            +V  G Q E D         K+E  E              + + G   I  +++   S  
Sbjct: 121  VVSFG-QDEVDWYRWSHNRRKVESWEDLKTRMFEFFRDTGQRSLGARLIRIQQEGSYSDY 180

Query: 243  GDKARGSLCRLP-PKESVLVTAFLNGLHPSLKAEVMSRRLMGLDQCMLEAQSIDDRDIAL 302
              K       LP   ESVL  AFL GL P+L+AEVMSR    L+ CM+ AQ ++DR++AL
Sbjct: 181  VKKFVNYSAPLPHMAESVLRDAFLTGLEPALQAEVMSRHPQTLEDCMMAAQLVNDRNLAL 240

Query: 303  KLALEEVKFQESDR-----------------KREQSPMTGVKPGAKGGLSKKRETPMRRL 362
            KLA  E+   E  R                 ++ +  M  +    KG   +K E P++RL
Sbjct: 241  KLAQAEMGIIEPKRSESAGNKVQWNNDKGMMRKNEFQMKQITIPLKGSY-QKGEPPVKRL 300

Query: 363  TDAKFKEKRDKEGLCF-----------------KELNVIIAGE---VEELEDIQEEMEAK 422
            +DA+F+ + DK GLCF                 +EL + I  E    EE E  +      
Sbjct: 301  SDAEFRARLDK-GLCFRCNEKYSHGHRCKIKEKRELMLFILNEEESTEEGEGSEAPNTGP 360

Query: 423  IEKKAMEVAENVQLALRSVYGFSAPRTMKMKGIVGGKEAIVLIDCGATHNFIHQKLADEL 482
            +E   +E  E   +  R++   +   TMK++GIV GKE IVLID GATHNFIH +L  E 
Sbjct: 361  VEINQLEEPEETMIEYRAITSLTTKGTMKLRGIVKGKEVIVLIDSGATHNFIHHELVTER 420

Query: 483  NLQVAETLNYGIVVGNGKAIRGQGVCKSVMVMLQGITIVNDFLPLELGKMDVILGMAWLS 542
             + +     +GI +G+G + +G+G+C  V + L+G+ +V D L + LG +DV+LGM WL 
Sbjct: 421  KIPINRNTQFGITIGDGTSCKGEGICSKVEIQLEGLRVVTDLLVVGLGTIDVVLGMQWLD 480

Query: 543  TTGFIGVHWPSLTMTFAVGEDQVTLKGDPSLTKTEVSLKVLTKTWETEDQEYLVEIQNKE 602
            TTG + +HWPSLTM F    ++V LKGDP+L + E SLK L KTWE EDQ +L++ Q  E
Sbjct: 481  TTGTMKIHWPSLTMVFWKEGNKVVLKGDPALIRAECSLKTLEKTWEAEDQGFLLDWQRYE 540

Query: 603  AE-EGEDKEPTIAEPEEERLPVMIQSLLERNGDIFELSRGLPPKR-----------DAPI 662
             E E  D + T    +EE LP MIQ LL +  D+F     LPPKR             PI
Sbjct: 541  IENEDADSKNTSQTGDEEGLP-MIQFLLHQYSDVFNSPTTLPPKRIIDHRILTLPGQKPI 600

Query: 663  NVRPYKYGHVQKDEIEKLVGEMLSTGIIRPSKSPFSSLVLLVKKKDGEWRFCVDYRKVNQ 722
            NVRPYKYGH QK+EIEKLV EML TGIIRPS SPFSS VLLVKKKDG WRFCVDYRK+N+
Sbjct: 601  NVRPYKYGHQQKEEIEKLVIEMLQTGIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNK 660

Query: 723  ATIAEKFPIPVIEEL---LHGASMFSKLDL-------------------RKHEGHYEFLV 782
             TIA+KFPIPVIEEL   LHGA++FSKLDL                   R HEGHYEF+V
Sbjct: 661  ITIADKFPIPVIEELLDELHGATVFSKLDLKSGYHQIRMREEDIEKTAFRTHEGHYEFVV 720

Query: 783  MPLGLINAPTTFLSLMNEVFKPFLRTFILVFFDDILVYSEDISTHETHLAVVFNVLRENK 842
            MP GL NAP TF SLMN+VFKPFLR  +LVFFDDILVYS DI+ HE HL +VF  LR+N+
Sbjct: 721  MPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDITEHEKHLGMVFATLRDNQ 780

Query: 843  LFANRKRCIFSQSRIQYLGHWVSKEGVEADGEKIKAMLQWPTPKNVTKLCSFLGLTGY-- 902
            L+ANRK+C+F+ S+I YLGH +SK GVEAD +K+K+MLQWP PK+VT L  FLGLTGY  
Sbjct: 781  LYANRKKCVFAHSQIHYLGHVISKHGVEADQDKVKSMLQWPKPKDVTGLRGFLGLTGYYR 840

Query: 903  -------------TDGVQ-HAKECDVHTTRA--------------SLTKLCFTLHHETDA 962
                         T  +Q +A + D + T A              +L         ETDA
Sbjct: 841  RFVKGYGEIAAPLTKLLQKNAFKWDENATLAFESLKSAMSTIPVLALPDWSLPFMIETDA 900

Query: 963  SRMGVGAVLMQESRPIAYFNQALSTRARAKSIYERELMAMVLVMQKWRHYLLGSKFTVIS 1022
            S  G+GAVL Q S PIA+F+Q LSTRA+AKSIYERELMA+VL +QKWRHYLLG +FT++S
Sbjct: 901  SGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMS 960

Query: 1023 DQKALKFLIEQQEVQPQFQKWLTKLLEYDFEILYQPELQNKAADALSRMPTPTEIRVLTT 1082
            DQKALKFL+EQ+EVQPQFQKWLTKLL YDFEILYQP LQNKAADALSRM    E++ L+T
Sbjct: 961  DQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALST 1020

Query: 1083 TTLVDLEVVQQEVEMDKDLQNIIAKLKEDPDSVPKFSLERGRLLYKKR------------ 1142
            T +VD+EVV +EVE D++LQ +I +L+ +P    K+SL  G L+YK R            
Sbjct: 1021 TGIVDMEVVTKEVEKDEELQLLIQQLQNNPALEGKYSLTNGTLMYKGRVVLSKSSSIIPS 1080

Query: 1143 -----YRRPLG------RTYKRMTGELYWRGMKKDVKEYVESCVICQKNKSEAVSPAGLL 1202
                 +   LG      RTYKRM+GEL+W+GMK+D+K+YVE C ICQ+NKSEA  PAG+L
Sbjct: 1081 LLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVL 1140

Query: 1203 QPLPVPEKIWGDITMDFVEGLPKSQGKDSIMVVVDRLSKYGHFIALSHPYNAKQVAQVFV 1262
            QPLP+P++I  D TMDF+EGLPK+ G + IMVVVDRLSKY +F+ + HP++AKQVA  F+
Sbjct: 1141 QPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFI 1200

Query: 1263 REIA-------------------------------------------------------- 1287
             +I                                                         
Sbjct: 1201 DKIVRRHGIPKSIISDRDKIFVSNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLET 1260

[Close]

BLAST of Clc11G13365 vs. ExPASy TrEMBL
Match: A0A5D3BBH7 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold549G00100 PE=4 SV=1)

HSP 1 Score: 1147.9 bits (2968), Expect = 0.0e+00
Identity = 684/1499 (45.63%), Postives = 887/1499 (59.17%), Query Frame = 0


Query: 63   MAQKMAEERFEAHEKELTVLRDLVVATCKNVERMSEDLRTKNKEAEVEEGES-------- 122
            MAQ+  EER E  EKE+  L+++++   K+++R++++LR ++ + + E G S        
Sbjct: 1    MAQRQMEERLEGTEKEVLSLKEMMLEMKKSMDRLADELRDQSYKKKEESGTSDGSIMKMK 60

Query: 123  ---------SQGRNGGFNRSKYKKLNMPVFDGEGPDAWIFRAETFFEIHELGS------R 182
                      +      +RSKYKKL MP+F GE P++W++RAE FFEI+ L         
Sbjct: 61   GKMEETDVTGEIHTHQIDRSKYKKLEMPMFLGENPESWVYRAEHFFEINNLPEAEKVKVA 120

Query: 183  LVPLGKQPEADPKLEGDERENAGVMEIHARRDSHESVAGDKARGS-LCRLPPK------- 242
            +V  G+      +   + R+     ++  R        G K+ G+ L R+  +       
Sbjct: 121  VVSFGQDEVDWYRWSHNRRKVESWEDLKTRMFEFFRDTGQKSLGARLIRIQQEGSYSDYV 180

Query: 243  --------------ESVLVTAFLNGLHPSLKAEVMSRRLMGLDQCMLEAQSIDDRDIALK 302
                          ESVL  AFL GL P+L+AEVMSR    L+ CM+ AQ ++DR++ALK
Sbjct: 181  KKFVNYSAPLPHMAESVLRDAFLTGLEPALQAEVMSRHPQTLEDCMMAAQLVNDRNLALK 240

Query: 303  LALEEVKFQESDR-----------------KREQSPMTGVKPGAKGGLSKKRETPMRRLT 362
            LA  E+   E  R                 ++ +  M  +    KG   +K E P++RL+
Sbjct: 241  LAQAEMGIIEPKRSESVGNKVQWNNEKGMLRKNEFQMKQITIPLKGSY-QKGEPPVKRLS 300

Query: 363  DAKFKEKRDKEGLCF-----------------KELNVIIAGEVEELEDIQEEMEA----K 422
            DA+F+ + DK GLCF                 +EL + I  E E  E+  E  EA     
Sbjct: 301  DAEFRARLDK-GLCFRCNEKYSHGHRCKIKEKRELMLFILNEEESTEE-GEGSEAPNTEP 360

Query: 423  IEKKAMEVAENVQLALRSVYGFSAPRTMKMKGIVGGKEAIVLIDCGATHNFIHQKLADEL 482
            +E   +   E   +  R++   +   TMK++GIV GKE IVLID GATHNFIH +L  E 
Sbjct: 361  VEINQLGEPEETMIEYRAITSLTTKGTMKLRGIVKGKEVIVLIDSGATHNFIHHELVKER 420

Query: 483  NLQVAETLNYGIVVGNGKAIRGQGVCKSVMVMLQGITIVNDFLPLELGKMDVILGMAWLS 542
             + +     +GI +G+G + +G+G+C  V + L+G+ +V D L + LG +DV+LGM WL 
Sbjct: 421  KIPINRNTQFGITIGDGTSCKGEGICSKVEIQLEGLRVVTDLLVVGLGTIDVVLGMQWLD 480

Query: 543  TTGFIGVHWPSLTMTFAVGEDQVTLKGDPSLTKTEVSLKVLTKTWETEDQEYLVEIQNKE 602
            TTG + +HWPSLTM F    ++V LKGDP+L + E SLK L KTWE EDQ +L++ Q  E
Sbjct: 481  TTGTMKIHWPSLTMVFWKEGNKVVLKGDPALIRAECSLKTLEKTWEAEDQGFLLDWQRYE 540

Query: 603  AE-EGEDKEPTIAEPEEERLPVMIQSLLERNGDIFELSRGLPPKR-----------DAPI 662
             E E  D + T    +EE LP MIQ LL +  D+F+    LPPKR             PI
Sbjct: 541  IENEDADSKNTSHTGDEEGLP-MIQFLLHQYSDVFKSPTTLPPKRSIDHRILTLPGQKPI 600

Query: 663  NVRPYKYGHVQKDEIEKLVGEMLSTGIIRPSKSPFSSLVLLVKKKDGEWRFCVDYRKVNQ 722
            NVRPYKYGH QK+EIEKLV EML TGIIRPS SPFSS VLLVKKKDG WRFCVDYRK+N+
Sbjct: 601  NVRPYKYGHQQKEEIEKLVIEMLQTGIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNK 660

Query: 723  ATIAEKFPIPVIEEL---LHGASMFSKLDL-------------------RKHEGHYEFLV 782
             TIA+KFPIPVIEEL   LHGA++FSKLDL                   R HEGHYEF+V
Sbjct: 661  ITIADKFPIPVIEELLDELHGATVFSKLDLKSGYHQIRMREEDIEKTAFRTHEGHYEFVV 720

Query: 783  MPLGLINAPTTFLSLMNEVFKPFLRTFILVFFDDILVYSEDISTHETHLAVVFNVLRENK 842
            MP GL NAP TF SLMN+VFKPFLR  +LVFFDDILVYS DI+ HE HL +VF  LR+N+
Sbjct: 721  MPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDITEHEKHLGMVFATLRDNQ 780

Query: 843  LFANRKRCIFSQSRIQYLGHWVSKEGVEADGEKIKAMLQWPTPKNVTKLCSFLGLTGY-- 902
            L+ANRK+C+F+ S+I YLGH +SK GVEAD +K+K+MLQWP PK+VT L  FLGLTGY  
Sbjct: 781  LYANRKKCVFAHSQIHYLGHVISKHGVEADQDKVKSMLQWPKPKDVTGLRGFLGLTGYYR 840

Query: 903  -------------TDGVQ-HAKECDVHTTRA--------------SLTKLCFTLHHETDA 962
                         T  +Q +A + D + T A              +L         ETDA
Sbjct: 841  RFVKGYGEIAAPLTKLLQKNAFKWDENATLAFESLKSAMSTIPVLALPDWSLPFMIETDA 900

Query: 963  SRMGVGAVLMQESRPIAYFNQALSTRARAKSIYERELMAMVLVMQKWRHYLLGSKFTVIS 1022
            S  G+GAVL Q S PIA+F+Q LSTRA+AKSIYERELMA+VL +QKWRHYLLG +FT++S
Sbjct: 901  SGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMS 960

Query: 1023 DQKALKFLIEQQEVQPQFQKWLTKLLEYDFEILYQPELQNKAADALSRMPTPTEIRVLTT 1082
            DQKALKFL+EQ+EVQPQFQKWLTKLL YDFEILYQP LQNKAADALSRM    E++ L+T
Sbjct: 961  DQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALST 1020

Query: 1083 TTLVDLEVVQQEVEMDKDLQNIIAKLKEDPDSVPKFSLERGRLLYKKR------------ 1142
            T +VD+EVV +EVE D++LQ +I +L+ +P    K+SL  G L+YK R            
Sbjct: 1021 TGIVDMEVVTKEVEKDEELQLLIQQLQNNPALEGKYSLTNGTLMYKGRVVLSKSSSIIPS 1080

Query: 1143 -----YRRPLG------RTYKRMTGELYWRGMKKDVKEYVESCVICQKNKSEAVSPAGLL 1202
                 +   LG      RTYKRM+GEL+W+GMK+D+K+YVE C ICQ+NKSEA  PAG+L
Sbjct: 1081 LLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVL 1140

Query: 1203 QPLPVPEKIWGDITMDFVEGLPKSQGKDSIMVVVDRLSKYGHFIALSHPYNAKQVAQVFV 1262
            QPLP+P++I  D TMDF+EGLPK+ G + IMVVVDRLSKY +F+ + HP++AKQVA  F+
Sbjct: 1141 QPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFI 1200

Query: 1263 REIA-------------------------------------------------------- 1287
             +I                                                         
Sbjct: 1201 DKIVRRHGIPKSIISDRDKIFVSNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLET 1260

[Close]

BLAST of Clc11G13365 vs. ExPASy TrEMBL
Match: A0A5D3DZK6 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G00310 PE=4 SV=1)

HSP 1 Score: 1147.9 bits (2968), Expect = 0.0e+00
Identity = 684/1499 (45.63%), Postives = 887/1499 (59.17%), Query Frame = 0


Query: 63   MAQKMAEERFEAHEKELTVLRDLVVATCKNVERMSEDLRTKNKEAEVEEGES-------- 122
            MAQ+  EER E  EKE+  L+++++   K+++R++++LR ++ + + E G S        
Sbjct: 1    MAQRQMEERLEGTEKEVLSLKEMMLEMKKSMDRLADELRDQSYKKKEESGTSDGSIMKMK 60

Query: 123  ---------SQGRNGGFNRSKYKKLNMPVFDGEGPDAWIFRAETFFEIHELGS------R 182
                      +      +RSKYKKL MP+F GE P++W++RAE FFEI+ L         
Sbjct: 61   GKMEETDVTGEIHTHQIDRSKYKKLEMPMFLGENPESWVYRAEHFFEINNLPEAEKVKVA 120

Query: 183  LVPLGKQPEADPKLEGDERENAGVMEIHARRDSHESVAGDKARGS-LCRLPPK------- 242
            +V  G+      +   + R+     ++  R        G K+ G+ L R+  +       
Sbjct: 121  VVSFGQDEVDWYRWSHNRRKVESWEDLKTRMFEFFRDTGQKSLGARLIRIQQEGSYSDYV 180

Query: 243  --------------ESVLVTAFLNGLHPSLKAEVMSRRLMGLDQCMLEAQSIDDRDIALK 302
                          ESVL  AFL GL P+L+AEVMSR    L+ CM+ AQ ++DR++ALK
Sbjct: 181  KKFVNYSAPLPHMAESVLRDAFLTGLEPALQAEVMSRHPQTLEDCMMAAQLVNDRNLALK 240

Query: 303  LALEEVKFQESDR-----------------KREQSPMTGVKPGAKGGLSKKRETPMRRLT 362
            LA  E+   E  R                 ++ +  M  +    KG   +K E P++RL+
Sbjct: 241  LAQAEMGIIEPKRSESVGNKVQWNNEKGMLRKNEFQMKQITIPLKGSY-QKGEPPVKRLS 300

Query: 363  DAKFKEKRDKEGLCF-----------------KELNVIIAGEVEELEDIQEEMEA----K 422
            DA+F+ + DK GLCF                 +EL + I  E E  E+  E  EA     
Sbjct: 301  DAEFRARLDK-GLCFRCNEKYSHGHRCKIKEKRELMLFILNEEESTEE-GEGSEAPNTEP 360

Query: 423  IEKKAMEVAENVQLALRSVYGFSAPRTMKMKGIVGGKEAIVLIDCGATHNFIHQKLADEL 482
            +E   +   E   +  R++   +   TMK++GIV GKE IVLID GATHNFIH +L  E 
Sbjct: 361  VEINQLGEPEETMIEYRAITSLTTKGTMKLRGIVKGKEVIVLIDSGATHNFIHHELVKER 420

Query: 483  NLQVAETLNYGIVVGNGKAIRGQGVCKSVMVMLQGITIVNDFLPLELGKMDVILGMAWLS 542
             + +     +GI +G+G + +G+G+C  V + L+G+ +V D L + LG +DV+LGM WL 
Sbjct: 421  KIPINRNTQFGITIGDGTSCKGEGICSKVEIQLEGLRVVTDLLVVGLGTIDVVLGMQWLD 480

Query: 543  TTGFIGVHWPSLTMTFAVGEDQVTLKGDPSLTKTEVSLKVLTKTWETEDQEYLVEIQNKE 602
            TTG + +HWPSLTM F    ++V LKGDP+L + E SLK L KTWE EDQ +L++ Q  E
Sbjct: 481  TTGTMKIHWPSLTMVFWKEGNKVVLKGDPALIRAECSLKTLEKTWEAEDQGFLLDWQRYE 540

Query: 603  AE-EGEDKEPTIAEPEEERLPVMIQSLLERNGDIFELSRGLPPKR-----------DAPI 662
             E E  D + T    +EE LP MIQ LL +  D+F+    LPPKR             PI
Sbjct: 541  IENEDADSKNTSHTGDEEGLP-MIQFLLHQYSDVFKSPTTLPPKRSIDHRILTLPGQKPI 600

Query: 663  NVRPYKYGHVQKDEIEKLVGEMLSTGIIRPSKSPFSSLVLLVKKKDGEWRFCVDYRKVNQ 722
            NVRPYKYGH QK+EIEKLV EML TGIIRPS SPFSS VLLVKKKDG WRFCVDYRK+N+
Sbjct: 601  NVRPYKYGHQQKEEIEKLVIEMLQTGIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNK 660

Query: 723  ATIAEKFPIPVIEEL---LHGASMFSKLDL-------------------RKHEGHYEFLV 782
             TIA+KFPIPVIEEL   LHGA++FSKLDL                   R HEGHYEF+V
Sbjct: 661  ITIADKFPIPVIEELLDELHGATVFSKLDLKSGYHQIRMREEDIEKTAFRTHEGHYEFVV 720

Query: 783  MPLGLINAPTTFLSLMNEVFKPFLRTFILVFFDDILVYSEDISTHETHLAVVFNVLRENK 842
            MP GL NAP TF SLMN+VFKPFLR  +LVFFDDILVYS DI+ HE HL +VF  LR+N+
Sbjct: 721  MPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDITEHEKHLGMVFATLRDNQ 780

Query: 843  LFANRKRCIFSQSRIQYLGHWVSKEGVEADGEKIKAMLQWPTPKNVTKLCSFLGLTGY-- 902
            L+ANRK+C+F+ S+I YLGH +SK GVEAD +K+K+MLQWP PK+VT L  FLGLTGY  
Sbjct: 781  LYANRKKCVFAHSQIHYLGHVISKHGVEADQDKVKSMLQWPKPKDVTGLRGFLGLTGYYR 840

Query: 903  -------------TDGVQ-HAKECDVHTTRA--------------SLTKLCFTLHHETDA 962
                         T  +Q +A + D + T A              +L         ETDA
Sbjct: 841  RFVKGYGEIAAPLTKLLQKNAFKWDENATLAFESLKSAMSTIPVLALPDWSLPFMIETDA 900

Query: 963  SRMGVGAVLMQESRPIAYFNQALSTRARAKSIYERELMAMVLVMQKWRHYLLGSKFTVIS 1022
            S  G+GAVL Q S PIA+F+Q LSTRA+AKSIYERELMA+VL +QKWRHYLLG +FT++S
Sbjct: 901  SGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMS 960

Query: 1023 DQKALKFLIEQQEVQPQFQKWLTKLLEYDFEILYQPELQNKAADALSRMPTPTEIRVLTT 1082
            DQKALKFL+EQ+EVQPQFQKWLTKLL YDFEILYQP LQNKAADALSRM    E++ L+T
Sbjct: 961  DQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALST 1020

Query: 1083 TTLVDLEVVQQEVEMDKDLQNIIAKLKEDPDSVPKFSLERGRLLYKKR------------ 1142
            T +VD+EVV +EVE D++LQ +I +L+ +P    K+SL  G L+YK R            
Sbjct: 1021 TGIVDMEVVTKEVEKDEELQLLIQQLQNNPALEGKYSLTNGTLMYKGRVVLSKSSSIIPS 1080

Query: 1143 -----YRRPLG------RTYKRMTGELYWRGMKKDVKEYVESCVICQKNKSEAVSPAGLL 1202
                 +   LG      RTYKRM+GEL+W+GMK+D+K+YVE C ICQ+NKSEA  PAG+L
Sbjct: 1081 LLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVL 1140

Query: 1203 QPLPVPEKIWGDITMDFVEGLPKSQGKDSIMVVVDRLSKYGHFIALSHPYNAKQVAQVFV 1262
            QPLP+P++I  D TMDF+EGLPK+ G + IMVVVDRLSKY +F+ + HP++AKQVA  F+
Sbjct: 1141 QPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFI 1200

Query: 1263 REIA-------------------------------------------------------- 1287
             +I                                                         
Sbjct: 1201 DKIVRRHGIPKSIISDRDKIFVSNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLET 1260

[Close]

BLAST of Clc11G13365 vs. ExPASy TrEMBL
Match: A0A5D3DU86 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold95G00470 PE=4 SV=1)

HSP 1 Score: 1147.9 bits (2968), Expect = 0.0e+00
Identity = 684/1499 (45.63%), Postives = 887/1499 (59.17%), Query Frame = 0


Query: 63   MAQKMAEERFEAHEKELTVLRDLVVATCKNVERMSEDLRTKNKEAEVEEGES-------- 122
            MAQ+  EER E  EKE+  L+++++   K+++R++++LR ++ + + E G S        
Sbjct: 1    MAQRQMEERLEGTEKEVLSLKEMMLEMKKSMDRLADELRDQSYKKKEESGTSDGSIMKMK 60

Query: 123  ---------SQGRNGGFNRSKYKKLNMPVFDGEGPDAWIFRAETFFEIHELGS------R 182
                      +      +RSKYKKL MP+F GE P++W++RAE FFEI+ L         
Sbjct: 61   GKMEETDVTGEIHTHQIDRSKYKKLEMPMFLGENPESWVYRAEHFFEINNLPEAEKVKVA 120

Query: 183  LVPLGKQPEADPKLEGDERENAGVMEIHARRDSHESVAGDKARGS-LCRLPPK------- 242
            +V  G+      +   + R+     ++  R        G K+ G+ L R+  +       
Sbjct: 121  VVSFGQDEVDWYRWSHNRRKVESWEDLKTRMFEFFRDTGQKSLGARLIRIQQEGSYSDYV 180

Query: 243  --------------ESVLVTAFLNGLHPSLKAEVMSRRLMGLDQCMLEAQSIDDRDIALK 302
                          ESVL  AFL GL P+L+AEVMSR    L+ CM+ AQ ++DR++ALK
Sbjct: 181  KKFVNYSAPLPHMAESVLRDAFLTGLEPALQAEVMSRHPQTLEDCMMAAQLVNDRNLALK 240

Query: 303  LALEEVKFQESDR-----------------KREQSPMTGVKPGAKGGLSKKRETPMRRLT 362
            LA  E+   E  R                 ++ +  M  +    KG   +K E P++RL+
Sbjct: 241  LAQAEMGIIEPKRSESVGNKVQWNNEKGMLRKNEFQMKQITIPLKGSY-QKGEPPVKRLS 300

Query: 363  DAKFKEKRDKEGLCF-----------------KELNVIIAGEVEELEDIQEEMEA----K 422
            DA+F+ + DK GLCF                 +EL + I  E E  E+  E  EA     
Sbjct: 301  DAEFRARLDK-GLCFRCNEKYSHGHRCKIKEKRELMLFILNEEESTEE-GEGSEAPNTEP 360

Query: 423  IEKKAMEVAENVQLALRSVYGFSAPRTMKMKGIVGGKEAIVLIDCGATHNFIHQKLADEL 482
            +E   +   E   +  R++   +   TMK++GIV GKE IVLID GATHNFIH +L  E 
Sbjct: 361  VEINQLGEPEETMIEYRAITSLTTKGTMKLRGIVKGKEVIVLIDSGATHNFIHHELVKER 420

Query: 483  NLQVAETLNYGIVVGNGKAIRGQGVCKSVMVMLQGITIVNDFLPLELGKMDVILGMAWLS 542
             + +     +GI +G+G + +G+G+C  V + L+G+ +V D L + LG +DV+LGM WL 
Sbjct: 421  KIPINRNTQFGITIGDGTSCKGEGICSKVEIQLEGLRVVTDLLVVGLGTIDVVLGMQWLD 480

Query: 543  TTGFIGVHWPSLTMTFAVGEDQVTLKGDPSLTKTEVSLKVLTKTWETEDQEYLVEIQNKE 602
            TTG + +HWPSLTM F    ++V LKGDP+L + E SLK L KTWE EDQ +L++ Q  E
Sbjct: 481  TTGTMKIHWPSLTMVFWKEGNKVVLKGDPALIRAECSLKTLEKTWEAEDQGFLLDWQRYE 540

Query: 603  AE-EGEDKEPTIAEPEEERLPVMIQSLLERNGDIFELSRGLPPKR-----------DAPI 662
             E E  D + T    +EE LP MIQ LL +  D+F+    LPPKR             PI
Sbjct: 541  IENEDADSKNTSHTGDEEGLP-MIQFLLHQYSDVFKSPTTLPPKRSIDHRILTLPGQKPI 600

Query: 663  NVRPYKYGHVQKDEIEKLVGEMLSTGIIRPSKSPFSSLVLLVKKKDGEWRFCVDYRKVNQ 722
            NVRPYKYGH QK+EIEKLV EML TGIIRPS SPFSS VLLVKKKDG WRFCVDYRK+N+
Sbjct: 601  NVRPYKYGHQQKEEIEKLVIEMLQTGIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNK 660

Query: 723  ATIAEKFPIPVIEEL---LHGASMFSKLDL-------------------RKHEGHYEFLV 782
             TIA+KFPIPVIEEL   LHGA++FSKLDL                   R HEGHYEF+V
Sbjct: 661  ITIADKFPIPVIEELLDELHGATVFSKLDLKSGYHQIRMREEDIEKTAFRTHEGHYEFVV 720

Query: 783  MPLGLINAPTTFLSLMNEVFKPFLRTFILVFFDDILVYSEDISTHETHLAVVFNVLRENK 842
            MP GL NAP TF SLMN+VFKPFLR  +LVFFDDILVYS DI+ HE HL +VF  LR+N+
Sbjct: 721  MPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDITEHEKHLGMVFATLRDNQ 780

Query: 843  LFANRKRCIFSQSRIQYLGHWVSKEGVEADGEKIKAMLQWPTPKNVTKLCSFLGLTGY-- 902
            L+ANRK+C+F+ S+I YLGH +SK GVEAD +K+K+MLQWP PK+VT L  FLGLTGY  
Sbjct: 781  LYANRKKCVFAHSQIHYLGHVISKHGVEADQDKVKSMLQWPKPKDVTGLRGFLGLTGYYR 840

Query: 903  -------------TDGVQ-HAKECDVHTTRA--------------SLTKLCFTLHHETDA 962
                         T  +Q +A + D + T A              +L         ETDA
Sbjct: 841  RFVKGYGEIAAPLTKLLQKNAFKWDENATLAFESLKSAMSTIPVLALPDWSLPFMIETDA 900

Query: 963  SRMGVGAVLMQESRPIAYFNQALSTRARAKSIYERELMAMVLVMQKWRHYLLGSKFTVIS 1022
            S  G+GAVL Q S PIA+F+Q LSTRA+AKSIYERELMA+VL +QKWRHYLLG +FT++S
Sbjct: 901  SGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMS 960

Query: 1023 DQKALKFLIEQQEVQPQFQKWLTKLLEYDFEILYQPELQNKAADALSRMPTPTEIRVLTT 1082
            DQKALKFL+EQ+EVQPQFQKWLTKLL YDFEILYQP LQNKAADALSRM    E++ L+T
Sbjct: 961  DQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALST 1020

Query: 1083 TTLVDLEVVQQEVEMDKDLQNIIAKLKEDPDSVPKFSLERGRLLYKKR------------ 1142
            T +VD+EVV +EVE D++LQ +I +L+ +P    K+SL  G L+YK R            
Sbjct: 1021 TGIVDMEVVTKEVEKDEELQLLIQQLQNNPALEGKYSLTNGTLMYKGRVVLSKSSSIIPS 1080

Query: 1143 -----YRRPLG------RTYKRMTGELYWRGMKKDVKEYVESCVICQKNKSEAVSPAGLL 1202
                 +   LG      RTYKRM+GEL+W+GMK+D+K+YVE C ICQ+NKSEA  PAG+L
Sbjct: 1081 LLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVL 1140

Query: 1203 QPLPVPEKIWGDITMDFVEGLPKSQGKDSIMVVVDRLSKYGHFIALSHPYNAKQVAQVFV 1262
            QPLP+P++I  D TMDF+EGLPK+ G + IMVVVDRLSKY +F+ + HP++AKQVA  F+
Sbjct: 1141 QPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVAMEFI 1200

Query: 1263 REIA-------------------------------------------------------- 1287
             +I                                                         
Sbjct: 1201 DKIVRRHGIPKSIISDRDKIFVSNFWKELFYAMNTILKRSTAFHPQTDGQTERVNQCLET 1260

[Close]

BLAST of Clc11G13365 vs. ExPASy TrEMBL
Match: A0A5A7V194 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G002120 PE=4 SV=1)

HSP 1 Score: 1147.5 bits (2967), Expect = 0.0e+00
Identity = 687/1499 (45.83%), Postives = 884/1499 (58.97%), Query Frame = 0


Query: 63   MAQKMAEERFEAHEKELTVLRDLVVATCKNVERMSEDLRTKNKEAEVEEGES-------- 122
            MAQ+  EER E  EKE+  L+++++   K+++R++++LR ++ + + E G S        
Sbjct: 1    MAQRQMEERLEGTEKEVLSLKEMMLEMKKSMDRLADELRDQSYKKKEESGTSDGSIMKMK 60

Query: 123  ---------SQGRNGGFNRSKYKKLNMPVFDGEGPDAWIFRAETFFEIHELGS------R 182
                      +      +RSKYKKL MP+F GE P++W++RAE FFEI+ L         
Sbjct: 61   GKMEETDVTGEIHTHQIDRSKYKKLEMPMFLGENPESWVYRAEHFFEINNLPEAEKVKVA 120

Query: 183  LVPLGKQPEAD--------PKLEGDE--------------RENAGVMEIHARRDSHESVA 242
            +V  G Q E D         K+E  E              + + G   I  +++   S  
Sbjct: 121  VVSFG-QDEVDWYRWSHNRRKVESWEDLKTRMFEFFRDTGQRSLGARLIRIQQEGSYSDY 180

Query: 243  GDKARGSLCRLP-PKESVLVTAFLNGLHPSLKAEVMSRRLMGLDQCMLEAQSIDDRDIAL 302
              K       LP   ESVL  AFL GL P+L+AEVMSR    L+ CM+ AQ ++DR++AL
Sbjct: 181  VKKFVNYSAPLPHMAESVLRDAFLTGLEPALQAEVMSRHPQTLEDCMMAAQLVNDRNLAL 240

Query: 303  KLALEEVKFQESDR-----------------KREQSPMTGVKPGAKGGLSKKRETPMRRL 362
            KLA  E+   E  R                 ++ +  M  +    KG   +K E P++RL
Sbjct: 241  KLAQAEMGIIEPKRSESAGNKVQWNNDKGMMRKNEFQMKQITIPLKGSY-QKGEPPVKRL 300

Query: 363  TDAKFKEKRDKEGLCF-----------------KELNVIIAGE---VEELEDIQEEMEAK 422
            +DA+F+ + DK GLCF                 +EL + I  E   +EE E  +      
Sbjct: 301  SDAEFRARLDK-GLCFRCNEKYSHGHRCKIKEKRELMLFILNEEESIEEGEGSEAPNTGP 360

Query: 423  IEKKAMEVAENVQLALRSVYGFSAPRTMKMKGIVGGKEAIVLIDCGATHNFIHQKLADEL 482
            +E   +E  E   +  R++   +   TMK++GIV GKE IVLID GATHNFIH +L  E 
Sbjct: 361  VEINQLEEPEETMIEYRAITSLTTKGTMKLRGIVKGKEVIVLIDSGATHNFIHHELVTER 420

Query: 483  NLQVAETLNYGIVVGNGKAIRGQGVCKSVMVMLQGITIVNDFLPLELGKMDVILGMAWLS 542
             + +     +GI +G+G + +G+G+C  V + L+G+ +V D L + LG +DV+LGM WL 
Sbjct: 421  KIPINRNTQFGITIGDGTSCKGEGICSKVEIQLEGLRVVTDLLVVGLGTIDVVLGMQWLD 480

Query: 543  TTGFIGVHWPSLTMTFAVGEDQVTLKGDPSLTKTEVSLKVLTKTWETEDQEYLVEIQNKE 602
            TTG + +HWPSLTM F    ++V LKGDP+L + E SLK L KTWE EDQ +L++ Q  E
Sbjct: 481  TTGTMKIHWPSLTMVFWKEGNKVVLKGDPALIRAECSLKTLEKTWEAEDQGFLLDWQRYE 540

Query: 603  AE-EGEDKEPTIAEPEEERLPVMIQSLLERNGDIFELSRGLPPKR-----------DAPI 662
             E E  D + T    +EE LP MIQ LL +  D+F     LPPKR             PI
Sbjct: 541  IENEDADSKNTSQTGDEEGLP-MIQFLLHQYSDVFNSPTTLPPKRIIDHRILTLPGQKPI 600

Query: 663  NVRPYKYGHVQKDEIEKLVGEMLSTGIIRPSKSPFSSLVLLVKKKDGEWRFCVDYRKVNQ 722
            NVRPYKYGH QK+EIEKLV EML TGIIRPS SPFSS VLLVKKKDG WRFCVDYRK+N+
Sbjct: 601  NVRPYKYGHQQKEEIEKLVIEMLQTGIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNK 660

Query: 723  ATIAEKFPIPVIEEL---LHGASMFSKLDL-------------------RKHEGHYEFLV 782
             TIA+KFPIPVIEEL   LHGA++FSKLDL                   R HEGHYEF+V
Sbjct: 661  ITIADKFPIPVIEELLDELHGATVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFVV 720

Query: 783  MPLGLINAPTTFLSLMNEVFKPFLRTFILVFFDDILVYSEDISTHETHLAVVFNVLRENK 842
            MP GL NAP TF S MN+VFKPFLR  +LVFFDDILVYS DI+ HE HL +VF  LR+N+
Sbjct: 721  MPFGLTNAPATFQSHMNQVFKPFLRRCVLVFFDDILVYSSDITEHEKHLGMVFATLRDNQ 780

Query: 843  LFANRKRCIFSQSRIQYLGHWVSKEGVEADGEKIKAMLQWPTPKNVTKLCSFLGLTGY-- 902
            L+ANRK+C+F+ S+I YLGH +SK GVEAD +K+K MLQWP PK+VT L  FLGLTGY  
Sbjct: 781  LYANRKKCVFAHSQIHYLGHVISKHGVEADRDKVKCMLQWPKPKDVTGLRGFLGLTGYYR 840

Query: 903  -------------TDGVQ-HAKECDVHTTRA--------------SLTKLCFTLHHETDA 962
                         T  +Q +A + D + T A              +L         ETDA
Sbjct: 841  PFVKSYGEIAAPLTKLLQKNAFKLDENATLAFESLKSAMSTIPVLTLPDWSLPFMIETDA 900

Query: 963  SRMGVGAVLMQESRPIAYFNQALSTRARAKSIYERELMAMVLVMQKWRHYLLGSKFTVIS 1022
            S  GVGAVL Q S PIA+F+Q LSTRA+AKSIYERELMA+VL +QKWRHYLLG +FT++S
Sbjct: 901  SGSGVGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMS 960

Query: 1023 DQKALKFLIEQQEVQPQFQKWLTKLLEYDFEILYQPELQNKAADALSRMPTPTEIRVLTT 1082
            DQKALKFL+EQ+EVQPQFQKWLTKLL YDFEILYQP LQNKAADALSRM    E++ L+T
Sbjct: 961  DQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALST 1020

Query: 1083 TTLVDLEVVQQEVEMDKDLQNIIAKLKEDPDSVPKFSLERGRLLYKKR------------ 1142
            T +VD+EVV +EVE D++LQ +I +L+ +P    K+SL  G L+YK R            
Sbjct: 1021 TGIVDMEVVTKEVEKDEELQLLIQQLQTNPALEGKYSLTNGTLMYKGRVVLSKSSSIIPS 1080

Query: 1143 -----YRRPLG------RTYKRMTGELYWRGMKKDVKEYVESCVICQKNKSEAVSPAGLL 1202
                 +   LG      RTYKRM+GEL+W+GMK+D+K+YVE C ICQ+NKSEA  PAG+L
Sbjct: 1081 LLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVL 1140

Query: 1203 QPLPVPEKIWGDITMDFVEGLPKSQGKDSIMVVVDRLSKYGHFIALSHPYNAKQVAQVFV 1262
            QPLP+P++I  D TMDF+EGLPK+ G + IMVVVDRLSKY +F+ + HP++AKQV   F+
Sbjct: 1141 QPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVTMEFI 1200

Query: 1263 REIA-------------------------------------------------------- 1287
             +I                                                         
Sbjct: 1201 DKIVRRHGIPKSIISDRDKIFVSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLET 1260

[Close]

BLAST of Clc11G13365 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 83.6 bits (205), Expect = 1.3e-15
Identity = 38/73 (52.05%), Postives = 51/73 (69.86%), Query Frame = 0


Query: 713 HLAVVFNVLRENKLFANRKRCIFSQSRIQYLG--HWVSKEGVEADGEKIKAMLQWPTPKN 772
           HL +V  +  +++ +ANRK+C F Q +I YLG  H +S EGV AD  K++AM+ WP PKN
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 773 VTKLCSFLGLTGY 784
            T+L  FLGLTGY
Sbjct: 63  TTELRGFLGLTGY 75

[Close]

BLAST of Clc11G13365 vs. TAIR 10
Match: AT3G29750.1 (Eukaryotic aspartyl protease family protein )

HSP 1 Score: 73.9 bits (180), Expect = 1.1e-12
Identity = 68/251 (27.09%), Postives = 117/251 (46.61%), Query Frame = 0


Query: 274 QSPMTGVKP-GAKGGLSKKRETPMRRLTDAKFKEKRDKEGLCFKELNVIIAGEVEELEDI 333
           Q+ +  +KP G     S++ E     L  AK    + K+G         +  E+EELE  
Sbjct: 53  QTAVRELKPNGINSYQSRQAELMSLTLVQAKLDVVKKKKG---------VINELEELEQD 112

Query: 334 QEEMEAKIEKKAMEVAENVQLALRSVYGFSAPRTMKMKGIVGGKEAIVLIDCGATHNFIH 393
              +   +E+  +++  N              + M+  G +   + +V ID GAT NFI 
Sbjct: 113 SYTLRQGMEQLVIDLTRN--------------KGMRFYGFILDHKVVVAIDSGATDNFIL 172

Query: 394 QKLADELNLQVAETLNYGIVVGNGKAIRGQGVCKSVMVMLQGITIVNDFLPLELGK--MD 453
            +LA  L L  + T    +++G  + I+  G C  + + +Q + I  +FL L+L K  +D
Sbjct: 173 VELAFSLKLPTSITNQASVLLGQRQCIQSVGTCLGIRLWVQEVEITENFLLLDLAKTDVD 232

Query: 454 VILGMAWLSTTGFIGVHWPSLTMTFAVGEDQVTLKGDPSLTKTEVSLKVLTKTWETEDQE 513
           VILG  WLS  G   V+W +   +F+  +  +TL  +    + +V+ KV  K+    +QE
Sbjct: 233 VILGYEWLSKLGETMVNWQNQDFSFSHNQQWITLCAEHEELE-QVTTKVKMKS--ENEQE 277

Query: 514 YLVEIQNKEAE 522
            + E +N + E
Sbjct: 293 DIEEQRNNDGE 277

[Close]

BLAST of Clc11G13365 vs. TAIR 10
Match: AT3G30770.1 (Eukaryotic aspartyl protease family protein )

HSP 1 Score: 62.0 bits (149), Expect = 4.2e-09
Identity = 45/164 (27.44%), Postives = 81/164 (49.39%), Query Frame = 0


Query: 352 QLALRSVYGFSAPRTMKMKGIVGGKEAIVLIDCGATHNFIHQKLADELNLQVAETLNYGI 411
           Q+  +S   F+  + M+  G +   + +V+ID GAT+NFI  +LA  L L  + T    +
Sbjct: 269 QVKRQSTTEFTKGKDMRFYGFISCHKVVVVIDSGATNNFISDELALVLKLPTSTTNQASV 328

Query: 412 VVGNGKAIRGQGVCKSVMVMLQGITIVNDFLPLELGK--MDVILGMAWLSTTGFIGVHWP 471
           ++G  + I+  G C  + +++Q + I  +FL L+L K  +DVILG           + W 
Sbjct: 329 LLGQRQCIQTIGTCFGINLLVQEVEINENFLLLDLTKTDVDVILGYGGSQNLERQWLIWL 388

Query: 472 SLTMTFAVGEDQVTL-KGDPSLTKTEVSLKVLTKTWETEDQEYL 513
           +   +F   +  VTL   D  L +    +K+ ++  + +   YL
Sbjct: 389 NQDFSFFHNQQWVTLCAKDKELEQVTTKVKMKSEYEQEKIDHYL 432

[Close]

BLAST of Clc11G13365 vs. TAIR 10
Match: ATMG00850.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 47.0 bits (110), Expect = 1.4e-04
Identity = 21/40 (52.50%), Postives = 30/40 (75.00%), Query Frame = 0


Query: 577 VQKDEIEKLVGEMLSTGIIRPSKSPFSSLVLLVKKKDGEW 617
           +++  ++  +GEML   II+PS SP+SS VLLV+KKDG W
Sbjct: 40  LRRTRLKNWLGEMLEARIIQPSISPYSSPVLLVQKKDGGW 79

The following BLAST results are available for this feature:

BLAST of Clc11G13365 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK21035.1	0.0e+00	45.90	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK30523.1 Ty3/gyp...	[more]
TYK28944.1	0.0e+00	45.63	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYJ96663.1	0.0e+00	45.63	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK27058.1	0.0e+00	45.63	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0059481.1	0.0e+00	45.83	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Clc11G13365 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	2.3e-68	27.20	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	3.9e-68	27.19	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P0CT41	2.8e-66	25.71	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	2.8e-66	25.71	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	2.8e-66	25.71	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Clc11G13365 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E325	0.0e+00	45.90	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3BBH7	0.0e+00	45.63	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3DZK6	0.0e+00	45.63	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3DU86	0.0e+00	45.63	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7V194	0.0e+00	45.83	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of Clc11G13365 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	1.3e-15	52.05	DNA/RNA polymerases superfamily protein	[more]
AT3G29750.1	1.1e-12	27.09	Eukaryotic aspartyl protease family protein	[more]
AT3G30770.1	4.2e-09	27.44	Eukaryotic aspartyl protease family protein	[more]
ATMG00850.1	1.4e-04	52.50	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 315..349
None	No IPR available	COILS	Coil	Coil	coord: 90..113
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 564..672 e-value: 2.4E-54 score: 185.8
None	No IPR available	GENE3D	3.10.20.370		coord: 807..874 e-value: 9.1E-7 score: 30.8
None	No IPR available	GENE3D	1.10.340.70		coord: 963..1022 e-value: 5.2E-8 score: 35.0
None	No IPR available	PFAM	PF08284	RVP_2	coord: 372..460 e-value: 1.6E-15 score: 57.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 267..295
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..124
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 349..698 coord: 811..1139
None	No IPR available	PANTHER	PTHR24559:SF319	SUBFAMILY NOT NAMED	coord: 349..698
None	No IPR available	PANTHER	PTHR24559:SF319	SUBFAMILY NOT NAMED	coord: 811..1139
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 812..925 e-value: 8.35852E-45 score: 155.728
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 369..458 e-value: 6.87695E-20 score: 83.5399
None	No IPR available	CDD	cd01647	RT_LTR	coord: 593..745 e-value: 1.36678E-61 score: 206.292
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 367..485 e-value: 1.1E-17 score: 66.0
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 366..463
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 634..747 e-value: 2.4E-54 score: 185.8
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 633..747 e-value: 9.9E-18 score: 64.5
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1097..1161 e-value: 2.3E-5 score: 25.7 coord: 1032..1096 e-value: 2.9E-8 score: 35.2
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 812..903 e-value: 1.9E-24 score: 86.0
IPR023780	Chromo domain	PFAM	PF00385	Chromo	coord: 1237..1280 e-value: 3.7E-6 score: 26.7
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 990..1023 e-value: 2.4E-10 score: 40.3
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 1235..1281 score: 10.150201
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 563..909
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 1034..1122
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 1235..1281

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc11G13365.1	Clc11G13365.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding