Clc11G12810 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc11G12810
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Reverse transcriptase
Location	ClcChr11: 22197771 .. 22202483 (-)
RNA-Seq Expression	Clc11G12810
Synteny	Clc11G12810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGACAGCGCAGGTGGTTGGAGTTAGTAAAGGATTATGATGTAAAAATCCTGTACCATCCCGGAAAAGCAAATGTAGTAGCAGATGCCTTAAGCAGAAAGGCAGTTCATTCAGCAGCTCTGATTACTGACCAGACCCCACTATGCAAGGACCTTGAGCGAGTAGGCATTGCAGTGGCGCTAGGAGAAGTCACTTCCCAGTTAGCTCAACTATCGGTGCAACCCACTTTTAGACAAAGGATCATAGACGCCCAACAGGGGGATCCATAGCTTAAGGAGAAATTTCGCCAAATGGAGTCGGGATAAATCAGTAAGTTCTCGGTATCCTCTGATAGTGGCCTCTCATACCACGGACGCTTGTGTTTTCCAGCAGGTAGTGTGGTTAAAGATGAACTGTTGTCGGAAGCTCATAACTCCCCATTTTCGATACATCCGGGCAGTACCAAGATGTATCAGGACCTGAAACGTCATTATTGGTGGCTCAATATGAAGAGGGAAGTGGCTGAATTCGTTAGCAAGTGTCCTGTATGCCAGCAAGTGAAGGCCTCGAGGCAGAAGCAGGCAGGATTGTTGCATCCCCTGACGGTACTCGAGTGGAAATGGGAGAATGTATCTATGGATTTCATAGTAGGTTTGCCTAAAACGGCGAAAGGTCACACTGTGATATGGGTCATTGTAGACAGACTCACCAAGTCAGCACATTTTATCCCAGGAAAGTCCACCTTTTCAGTAAGTAAGTGGGCACAAATTTATATAAAGGAAGTGGTAAGGTTACACGGAGTACCAGTTTCTATAGTGTCTGACAAAGACCCTCGCTTCATGTCTAACTTTTGGAAGAGCCTCCGGACTGCGTTGGGCACTCGGTTGGATTTTAGTACGACTTTTCACCCCCAGACGGATGGACAAACGGAACGTTTGAATCAGATACTAGAGGACATGTTGCGTGCTTGCGCCCTAGACTTTCCAGGAAGTTGGGACTCCCACTTGCACCTAATGGAGTTTGCCTACAATAACAGTTATCAAGCTACCATTGGCATGGCGCCATTCGAAGCCTTATATGGTAAGAGTTGCAGATCTTCAGTTTGCTGGGATGAAGTTGGGGAACGAAAACTGTTGGGGCCAGAGTTAGTACAACTCACCAACGAGGCTATAACAAAAGATTAGGGCAAGGATGCAGACAACTTAGAGTAGGCAGAAAAGCTACGCCGATGTAAGACGGCGAGACCTAGAATTCGAGGTAGGTGATAAGGTATTCTTGAAAGTGGCACCTATGAAGGGTGTCTTGAGGTTCGGGAAAAAGGGGAAGTTAAGCCTACAGTTCATTGGACCGTTTGAAATATTGGAGCAAGTTGGCCCCGTGGCCTACTGTTTAGCCTTGCCACCGTCGTTCTCCACAGTTCACAACGTGTTCCATGTCTCCATGCTTCGAAGGTATATGGTAGATCCATCCCACGTGATCGATTTTGAGCCTTTACAGTTGAACAAAGATTTAAGTTATGAGGAAAAGCCGGTGCAAGTTCTTGCAAGGGAAGTGAAGGTTTTGCGCAACCGGAAAATAGCACTGGTGAAAGTCCTCTGGCAGAACCACCAGTGTGAGGAGGCAACATGGGAACGAGAGGATGAAATGAGGTCAAAGCATCCGGAGTTTTTCCAACAGTAAAACTTTCGAGGATGAAAGTTTCTTAAAGGGGGAAGAATGTGACAACCCAAATCATTGAGGTAAATTCTCCTATTAAGATTATTTAAGTTATTATGCATAAAAAAAAAGTGTATATATATATATATATATATATATATATATATATATATATATATATGTATTTGTTTATTTATTTAGATTAAGGAGGAAAGTTTTAAAATTGGTATTTGTAGTGGTTGGTGAGACTTAGGTGGATTTAAGGAAATTTTTGGAATCGGCAAGGGATAACTTATTTTGAGGCAAATAAAATAAAATAAGTAAATTTGATTGGGTTGGAATTTTAAATAAAGAAGATTTTTTTTTTATTTTTGGGGAAAAGGGAAAGGTAGAGTTAATGATTTAAGGAGGGGAAGGAATTAGGGTTTATTTTAAACCCTCCTCGTTTTGCGTGCAGTTTAAAGAAAAAAAAAGAGAACTCTCTCCCTCTTCTCTCTCCCTCTCTGCGTCACTCTTTCCCCCTTCCTCTCTCGATTTTTCTTCGCCGCCGCCCTTCCTTCTTTTTTTCCGTTTTATCTCTCCACTGCCACACTCTCTTCTACCTCTGCTTCCGCCGTCTCTCGCTCTCAGTCGCCGCTCGCTTTCCCGGAAGTTCACGCTCTCTCTCGCCCAGGATCACGCTCTCTCGCTCAGGCTCTCGCTCTCTCGCTCTCCCACTCTCTCGCTCGGACTCAAGCTCTCCCGCTTTCCAGCTCTCCCGCTCTCTCGCTCAGAATCTCGTTCTCGGCTGCGATTAACTGCTTGCCTGATCGTCAGTCGCCGGATCAGTATTCCCTAAATGAGTATCTCAAACCTGAGTAGGTTAGTGGCGTAATTTGGTAAATTTTTGGGAATATGAATTAATTGGTAAATCTTGATAGGTGGTCGACGATTACTTTGGTTCATAGGATCGGAGGAAATTGCGAGTTTAGCCACGTTTGGTTTGTTCAGGAATTTTGTGAGAGTTGCGGTGTGGTTAGCCTTATTGATCAATCATCAAGTAAGTGATCTTACTACCTGAACCGCCTTCGGGCCATATGTTTAGTTGCCATGATGTAGTAGGTTTCTAAAGCCACTTATGATATACTATGCTTGTATGAAATTTCCATGTCTTAAAGTTGTATGTGCATGTAGTGTATAAGCCTATGCTATGAGACGTTTATGAACATTACTGTTAATGTAAGAATCCATGGAATGGAATGAGCGTGAACTTGGTTGATCATGTATGATGAGTAGTGGTGACTCTCCTACGTTGGTTAGGTGTCCATAGGAGGTTGTGTTCCTTCGGGTTCACTGGAGGTTGTGTTCCTTCGAGTCCACTGGAGGTTGTGTTCCTTCAGGTCCACTGGAGGATGTGTTCATTCGGGTTCACTGGAGGATGTGTTCCTTCGGGTTCACTAGAGGTTGTGTTTCTTCGGGTTCACCAGAGGTTGTGTTTCTTCGGGTACACCAAAGGTTGTGTTCCTTCGGGATCACCAGAGGTAAGAGTCTCCTTCGGGGCTCACTAGAGGTTTGTGAGCACCCATAACCAACGGTGAGGCGGGTGTAACCATTCCCCTATGGGAGTATGATAGATATGCATGTCTCATGTTTGATGCACTTAATGGACTTAGATGCCTAGCCTGACTCCGGTAGTGGGGTCACTTACTGAGTAATATAATTACGTACCCTTTCCTCTTATATGTTTTCCAAGTAGAGGAAGGAATGTGCCGACGCATGACAAGAAGAATCCTTGATGGCATCACGAGATCCATAGTAGCTTTTGCTTAGTCTTGCATGTTTTACTGAAATTTTGTCCAATTGTCTAATTTTGTGTTGAGACTCGTCTCGTTATTTGTTATGTGGATTTTCATTCATGAAGCTTCTTTTATTGATTTTCTTAGGGGTACCCTGAACCAAAATTTCCTTTTATTTGTTTTTGCATTGTTTTTCTTGAATTAAAATAAGTAGAAATTTGCATGAAAAGCATGGGTGATTCTTCACTATTCAGCATAGTGTCGTTCTTTCGAGTTGTTGTATGCATTGAGTAATGGTCCGATTAGATTGTGTAAGTCAGGTCGTTGCAGTTCAAATATCACTAACATTTAACATCGTGGTATGTTTTCATAATAAATTATTTTTAGTGGCAGCTTAAACAAAAAATTATTAATTAAATTATATAACTCATCACTATAAAATCATTAAAGTATTCATCTATAACTATATTGTATAAAATAAGATTACAGTCATTACTTAATTAACCAATTGTTTACAAACTTTTTAAAAAGTTATTAGTAATTATAATTAAATATGTATTTATTATTACTTAAAAAAAAGTTCATATTAAATTTTTAGGAAGTAAAGCTATTATCTCTATCAGAGCAAGAGCTGTTAGATTGCAATTACAGGAACAAAGGATGTAACGGAGGACTCATGGAAATCACTTTCCCTACCATGGATCAAGAGGATTCTGTCGCTCATCCAAAGTCAGTTTTATAATTCATGAATCAATTCAAACCTAATACATTGTTCATCCTGTCATAAATTATCAAACTAAAGCATATATTGTTTGGTTTAGCAGATATCTTCACCAATAGTTAAAATTGATGGATATGAAAGCGTACCTGAAAACGAGAATGCTCTGATGCAAGTCGTCGCAAACCAACCAGTCTCAGTCGCCATTGACGCCGCGGGAAGAGATTTCCAATTTTACTGGCGGCAAGTTCCTAGTTCACTCGAGCAATCCATCGATTCACTGTAAACTTGTATAATGTTTTCTATGCCTACAAATCTACAATAGCTAGCTTCAGCCATTGTTAATAATGATAGAAAAAAATGTGGCTAAATTGCAGAGAGTATTCGATGGATACAGCGGAACAGAGCTTAATCATGGAGTGGTGGCGATTGGGTATGGAACAACCGAAGACGGAACAGATTATTGGATCTTGAGGAATTCATGGGGAATTGGATGGAGAGAGGACGATTATATAAATATGAAGCGATCGCCCGAAGGTCTCTGTGGAATAGCCATGGAAGCTTCTTATCCCATCAAGTTCTAG

mRNA sequence

ATGAGACAGCGCAGGTGGTTGGAGTTAGTAAAGGATTATGATGTAAAAATCCTGTACCATCCCGGAAAAGCAAATGTAGTAGCAGATGCCTTAAGCAGAAAGGCAGTTCATTCAGCAGCTCTGATTACTGACCAGACCCCACTATGCAAGGACCTTGAGCGAGTAGGCATTGCAGTGGCGCTAGGAGAAGTCACTTCCCATAAGTTCTCGGTATCCTCTGATAGTGGCCTCTCATACCACGGACGCTTGTGTTTTCCAGCAGGTAGTGTGGTTAAAGATGAACTGTTGTCGGAAGCTCATAACTCCCCATTTTCGATACATCCGGGCAGTACCAAGATGTATCAGGACCTGAAACGTCATTATTGGTGGCTCAATATGAAGAGGGAAGTGGCTGAATTCGTTAGCAAGTGTCCTGTATGCCAGCAAGTGAAGGCCTCGAGGCAGAAGCAGGCAGGATTGTTGCATCCCCTGACGGTACTCGAGTGGAAATGGGAGAATGTATCTATGGATTTCATAGTAGGTTTGCCTAAAACGGCGAAAGGTCACACTGTGATATGGGTCATTGTAGACAGACTCACCAAGTCAGCACATTTTATCCCAGGAAAGTCCACCTTTTCAGTAAGTAAGTGGGCACAAATTTATATAAAGGAAGTGGTAAGGTTACACGGAGTACCAGTTTCTATAGTGTCTGACAAAGACCCTCGCTTCATGTCTAACTTTTGGAAGAGCCTCCGGACTGCGTTGGGCACTCGGTTGGATTTTAGTACGACTTTTCACCCCCAGACGGATGGACAAACGGAACGTTTGAATCAGATACTAGAGGACATGTTGCGTGCTTGCGCCCTAGACTTTCCAGGAAGTTGGGACTCCCACTTGCACCTAATGGAGTTTGCCTACAATAACAGTTATCAAGCTACCATTGGCATGGCGCCATTCGAAGCCTTATATGGTGATAAGGTATTCTTGAAAGTGGCACCTATGAAGGGTGTCTTGAGGTTCGGGAAAAAGGGGAAGTTAAGCCTACAGTTCATTGGACCGTTTGAAATATTGGAGCAAGTTGGCCCCGTGGCCTACTGTTTAGCCTTGCCACCGTCGTTCTCCACAGTTCACAACGTGTTCCATGTCTCCATGCTTCGAAGGTATATGGTAGATCCATCCCACGTGATCGATTTTGAGCCTTTACAGTTGAACAAAGATTTAAGTTATGAGGAAAAGCCGGTGCAAGTTCTTGCAAGGGAAGTGAAGGTTTTGCGCAACCGGAAAATAGCACTGGTGAAAGTCCTCTGGCAGAACCACCAGTGTGAGGAGGCAACATGGGAACGAGAGGATGAAATGAGGTCAAAGCATCCGGAGTTTTTCCAACAAAAAAAAAAGAGAACTCTCTCCCTCTTCTCTCTCCCTCTCTGCGTCACTCTTTCCCCCTTCCTCTCTCGATTTTTCTTCGCCGCCGCCCTTCCTTCTTTTTTTCCGTTTTATCTCTCCACTGCCACACTCTCTTCTACCTCTGCTTCCGCCGTCTCTCGCTCTCAGTCGCCGCTCGCTTTCCCGGAAGTTCACGCTCTCTCTCGCCCAGGATCACGCTCTCTCGCTCAGGCTCTCGCTCTCTCGCTCTCCCACTCTCTCGCTCGGACTCAAGCTCTCCCGCTTTCCAGCTCTCCCGCTCTCTCGCTCAGAATCTCGTTCTCGGCTGCGATTAACTGCTTGCCTGATCGTCAGTCGCCGGATCAGTATTCCCTAAATGAGTATCTCAAACCTGAGATCGGAGGAAATTGCGAGTTTAGCCACGTTTGGTTTGTTCAGGAATTTTGTGAGAGTTGCGGTGTGGTTAGCCTTATTGATCAATCATCAAGTGTCCATAGGAGGTTGTGTTCCTTCGGGTTCACTGGAGGTTGTGTTCCTTCGAGTCCACTGGAGGTTGTGTTCCTTCAGGTCCACTGGAGGATGTGTTCATTCGGGTTCACTGGAGGATGTGTTCCTTCGGGTTCACTAGAGGTTGTGTTTCTTCGGGTTCACCAGAGGTTGTGTTTCTTCGGGTACACCAAAGGTTGTGTTCCTTCGGGATCACCAGAGATATCTTCACCAATAGTTAAAATTGATGGATATGAAAGCGTACCTGAAAACGAGAATGCTCTGATGCAAGTCGTCGCAAACCAACCAGTCTCAGTCGCCATTGACGCCGCGGGAAGAGATTTCCAATTTTACTGGCGGCAAGTTCCTAGTTCACTCGAGCAATCCATCGATTCACTCGGAACAGAGCTTAATCATGGAGTGGTGGCGATTGGGTATGGAACAACCGAAGACGGAACAGATTATTGGATCTTGAGGAATTCATGGGGAATTGGATGGAGAGAGGACGATTATATAAATATGAAGCGATCGCCCGAAGGTCTCTGTGGAATAGCCATGGAAGCTTCTTATCCCATCAAGTTCTAG

Coding sequence (CDS)

ATGAGACAGCGCAGGTGGTTGGAGTTAGTAAAGGATTATGATGTAAAAATCCTGTACCATCCCGGAAAAGCAAATGTAGTAGCAGATGCCTTAAGCAGAAAGGCAGTTCATTCAGCAGCTCTGATTACTGACCAGACCCCACTATGCAAGGACCTTGAGCGAGTAGGCATTGCAGTGGCGCTAGGAGAAGTCACTTCCCATAAGTTCTCGGTATCCTCTGATAGTGGCCTCTCATACCACGGACGCTTGTGTTTTCCAGCAGGTAGTGTGGTTAAAGATGAACTGTTGTCGGAAGCTCATAACTCCCCATTTTCGATACATCCGGGCAGTACCAAGATGTATCAGGACCTGAAACGTCATTATTGGTGGCTCAATATGAAGAGGGAAGTGGCTGAATTCGTTAGCAAGTGTCCTGTATGCCAGCAAGTGAAGGCCTCGAGGCAGAAGCAGGCAGGATTGTTGCATCCCCTGACGGTACTCGAGTGGAAATGGGAGAATGTATCTATGGATTTCATAGTAGGTTTGCCTAAAACGGCGAAAGGTCACACTGTGATATGGGTCATTGTAGACAGACTCACCAAGTCAGCACATTTTATCCCAGGAAAGTCCACCTTTTCAGTAAGTAAGTGGGCACAAATTTATATAAAGGAAGTGGTAAGGTTACACGGAGTACCAGTTTCTATAGTGTCTGACAAAGACCCTCGCTTCATGTCTAACTTTTGGAAGAGCCTCCGGACTGCGTTGGGCACTCGGTTGGATTTTAGTACGACTTTTCACCCCCAGACGGATGGACAAACGGAACGTTTGAATCAGATACTAGAGGACATGTTGCGTGCTTGCGCCCTAGACTTTCCAGGAAGTTGGGACTCCCACTTGCACCTAATGGAGTTTGCCTACAATAACAGTTATCAAGCTACCATTGGCATGGCGCCATTCGAAGCCTTATATGGTGATAAGGTATTCTTGAAAGTGGCACCTATGAAGGGTGTCTTGAGGTTCGGGAAAAAGGGGAAGTTAAGCCTACAGTTCATTGGACCGTTTGAAATATTGGAGCAAGTTGGCCCCGTGGCCTACTGTTTAGCCTTGCCACCGTCGTTCTCCACAGTTCACAACGTGTTCCATGTCTCCATGCTTCGAAGGTATATGGTAGATCCATCCCACGTGATCGATTTTGAGCCTTTACAGTTGAACAAAGATTTAAGTTATGAGGAAAAGCCGGTGCAAGTTCTTGCAAGGGAAGTGAAGGTTTTGCGCAACCGGAAAATAGCACTGGTGAAAGTCCTCTGGCAGAACCACCAGTGTGAGGAGGCAACATGGGAACGAGAGGATGAAATGAGGTCAAAGCATCCGGAGTTTTTCCAACAAAAAAAAAAGAGAACTCTCTCCCTCTTCTCTCTCCCTCTCTGCGTCACTCTTTCCCCCTTCCTCTCTCGATTTTTCTTCGCCGCCGCCCTTCCTTCTTTTTTTCCGTTTTATCTCTCCACTGCCACACTCTCTTCTACCTCTGCTTCCGCCGTCTCTCGCTCTCAGTCGCCGCTCGCTTTCCCGGAAGTTCACGCTCTCTCTCGCCCAGGATCACGCTCTCTCGCTCAGGCTCTCGCTCTCTCGCTCTCCCACTCTCTCGCTCGGACTCAAGCTCTCCCGCTTTCCAGCTCTCCCGCTCTCTCGCTCAGAATCTCGTTCTCGGCTGCGATTAACTGCTTGCCTGATCGTCAGTCGCCGGATCAGTATTCCCTAAATGAGTATCTCAAACCTGAGATCGGAGGAAATTGCGAGTTTAGCCACGTTTGGTTTGTTCAGGAATTTTGTGAGAGTTGCGGTGTGGTTAGCCTTATTGATCAATCATCAAGTGTCCATAGGAGGTTGTGTTCCTTCGGGTTCACTGGAGGTTGTGTTCCTTCGAGTCCACTGGAGGTTGTGTTCCTTCAGGTCCACTGGAGGATGTGTTCATTCGGGTTCACTGGAGGATGTGTTCCTTCGGGTTCACTAGAGGTTGTGTTTCTTCGGGTTCACCAGAGGTTGTGTTTCTTCGGGTACACCAAAGGTTGTGTTCCTTCGGGATCACCAGAGATATCTTCACCAATAGTTAAAATTGATGGATATGAAAGCGTACCTGAAAACGAGAATGCTCTGATGCAAGTCGTCGCAAACCAACCAGTCTCAGTCGCCATTGACGCCGCGGGAAGAGATTTCCAATTTTACTGGCGGCAAGTTCCTAGTTCACTCGAGCAATCCATCGATTCACTCGGAACAGAGCTTAATCATGGAGTGGTGGCGATTGGGTATGGAACAACCGAAGACGGAACAGATTATTGGATCTTGAGGAATTCATGGGGAATTGGATGGAGAGAGGACGATTATATAAATATGAAGCGATCGCCCGAAGGTCTCTGTGGAATAGCCATGGAAGCTTCTTATCCCATCAAGTTCTAG

Protein sequence

MRQRRWLELVKDYDVKILYHPGKANVVADALSRKAVHSAALITDQTPLCKDLERVGIAVALGEVTSHKFSVSSDSGLSYHGRLCFPAGSVVKDELLSEAHNSPFSIHPGSTKMYQDLKRHYWWLNMKREVAEFVSKCPVCQQVKASRQKQAGLLHPLTVLEWKWENVSMDFIVGLPKTAKGHTVIWVIVDRLTKSAHFIPGKSTFSVSKWAQIYIKEVVRLHGVPVSIVSDKDPRFMSNFWKSLRTALGTRLDFSTTFHPQTDGQTERLNQILEDMLRACALDFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGDKVFLKVAPMKGVLRFGKKGKLSLQFIGPFEILEQVGPVAYCLALPPSFSTVHNVFHVSMLRRYMVDPSHVIDFEPLQLNKDLSYEEKPVQVLAREVKVLRNRKIALVKVLWQNHQCEEATWEREDEMRSKHPEFFQQKKKRTLSLFSLPLCVTLSPFLSRFFFAAALPSFFPFYLSTATLSSTSASAVSRSQSPLAFPEVHALSRPGSRSLAQALALSLSHSLARTQALPLSSSPALSLRISFSAAINCLPDRQSPDQYSLNEYLKPEIGGNCEFSHVWFVQEFCESCGVVSLIDQSSSVHRRLCSFGFTGGCVPSSPLEVVFLQVHWRMCSFGFTGGCVPSGSLEVVFLRVHQRLCFFGYTKGCVPSGSPEISSPIVKIDGYESVPENENALMQVVANQPVSVAIDAAGRDFQFYWRQVPSSLEQSIDSLGTELNHGVVAIGYGTTEDGTDYWILRNSWGIGWREDDYINMKRSPEGLCGIAMEASYPIKF

Homology

[Close]

BLAST of Clc11G12810 vs. NCBI nr
Match: KAA0040695.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 710.3 bits (1832), Expect = 1.9e-200
Identity = 349/515 (67.77%), Postives = 405/515 (78.64%), Query Frame = 0


Query: 1    MRQRRWLELVKDYDVKILYHPGKANVVADALSRKAVHSAALITDQTPLCKDLERVGIAVA 60
            MRQRRWLELVKDYD +ILYHPGKANVVADALSRK  HSAALIT Q PL +DLER  IAV+
Sbjct: 1037 MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 1096

Query: 61   LGEVT-------------------------------------SHKFSVSSDSGLSYHGRL 120
            +G VT                                     + +FS+SSD GL +   L
Sbjct: 1097 VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERHL 1156

Query: 121  CFPAGSVVKDELLSEAHNSPFSIHPGSTKMYQDLKRHYWWLNMKREVAEFVSKCPVCQQV 180
            C P+ S VK ELLSEAH+SPFS+HPGSTKMYQDLKR YWW NMKREVAEFVS+C VCQQV
Sbjct: 1157 CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWHNMKREVAEFVSRCLVCQQV 1216

Query: 181  KASRQKQAGLLHPLTVLEWKWENVSMDFIVGLPKTAKGHTVIWVIVDRLTKSAHFIPGKS 240
            KA RQK AGLL PL++ EWKWENVSMDFI GLP+T +G TVIWV+VDRLTK AHF+PGKS
Sbjct: 1217 KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKLAHFVPGKS 1276

Query: 241  TFSVSKWAQIYIKEVVRLHGVPVSIVSDKDPRFMSNFWKSLRTALGTRLDFSTTFHPQTD 300
            T++ SKWAQ+Y+ E+VRLHGVPVSIVS++D RF S FWK L+TA+GTRLDFST FHPQTD
Sbjct: 1277 TYTASKWAQLYMSEIVRLHGVPVSIVSNRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 1336

Query: 301  GQTERLNQILEDMLRACALDFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY------- 360
            GQTERLNQ+LEDMLRACAL+FPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY       
Sbjct: 1337 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 1396

Query: 361  -----------------GDKVFLKVAPMKGVLRFGKKGKLSLQFIGPFEILEQVGPVAYC 420
                             GDKVFLKVAPM+GVLRF ++GKLS +F+GPFEILE++GPVAY 
Sbjct: 1397 VCWGEVDVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYR 1456

Query: 421  LALPPSFSTVHNVFHVSMLRRYMVDPSHVIDFEPLQLNKDLSYEEKPVQVLAREVKVLRN 455
            L LPPS STVH+V HVSMLR+Y+ DPSHV+D+EPL+++++LSY E+PV+VLAREVK LRN
Sbjct: 1457 LVLPPSLSTVHDVIHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVEVLAREVKTLRN 1516

[Close]

BLAST of Clc11G12810 vs. NCBI nr
Match: KAA0051368.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 709.1 bits (1829), Expect = 4.2e-200
Identity = 356/552 (64.49%), Postives = 410/552 (74.28%), Query Frame = 0


Query: 1    MRQRRWLELVKDYDVKILYHPGKANVVADALSRKAVHSAALITDQTPLCKDLERVGIAVA 60
            MRQRRWLELVKDYD +ILYHPGKANVVADALSRK  HSAALIT Q PL +DLER  IAV+
Sbjct: 897  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 956

Query: 61   LGEVT-------------------------------------SHKFSVSSDSGLSYHGRL 120
            +G VT                                     + +FS+SSD GL +  RL
Sbjct: 957  VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL 1016

Query: 121  CFPAGSVVKDELLSEAHNSPFSIHPGSTKMYQDLKRHYWWLNMKREVAEFVSKCPVCQQV 180
            C P+ S VK ELLSEAH+SPFS+HPGSTKMYQDLKR YWW NMKREVAEFVSKC VCQQV
Sbjct: 1017 CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV 1076

Query: 181  KASRQKQAGLLHPLTVLEWKWENVSMDFIVGLPKTAKGHTVIWVIVDRLTKSAHFIPGKS 240
            KA RQK AGLL PL++ EWKWENVSMDFI GLP+T +G TVIWV+VDRLTKSAHF+PGKS
Sbjct: 1077 KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 1136

Query: 241  TFSVSKWAQIYIKEVVRLHGVPVSIVSDKDPRFMSNFWKSLRTALGTRLDFSTTFHPQTD 300
            T++ SKWAQ+Y+ E+VRLHGVPVSIVSD+D RF S FWK L+TA+GTRLDFST FHPQTD
Sbjct: 1137 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 1196

Query: 301  GQTERLNQILEDMLRACALDFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY------- 360
            GQTERLNQ+LEDMLRACAL+FPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY       
Sbjct: 1197 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSP 1256

Query: 361  -----------------------------------------------------GDKVFLK 420
                                                                 GDKVFLK
Sbjct: 1257 VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLK 1316

Query: 421  VAPMKGVLRFGKKGKLSLQFIGPFEILEQVGPVAYCLALPPSFSTVHNVFHVSMLRRYMV 456
            VAPMKGVLRF ++GKLS +F+GPFEILE++GPVAY LALPPS STVH+VFHVSMLR+Y+ 
Sbjct: 1317 VAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVP 1376

[Close]

BLAST of Clc11G12810 vs. NCBI nr
Match: KAA0051357.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 708.4 bits (1827), Expect = 7.2e-200
Identity = 355/552 (64.31%), Postives = 408/552 (73.91%), Query Frame = 0


Query: 1    MRQRRWLELVKDYDVKILYHPGKANVVADALSRKAVHSAALITDQTPLCKDLERVGIAVA 60
            MRQRRWLELVKDYD +ILYHPGKANVVADALSRK  HSAALIT Q PL +DLER  IAV+
Sbjct: 940  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 999

Query: 61   LGEVTSH-------------------------------------KFSVSSDSGLSYHGRL 120
            +G VT                                       +FS+SSD GLS+ GRL
Sbjct: 1000 VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLSFEGRL 1059

Query: 121  CFPAGSVVKDELLSEAHNSPFSIHPGSTKMYQDLKRHYWWLNMKREVAEFVSKCPVCQQV 180
            C P+ S VK ELL EAH+SPFS+HPGSTKMYQDLKR YWW NMKREVAEFVSKC VCQQV
Sbjct: 1060 CVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV 1119

Query: 181  KASRQKQAGLLHPLTVLEWKWENVSMDFIVGLPKTAKGHTVIWVIVDRLTKSAHFIPGKS 240
            K  RQK AGLL PL++ EWKWENVSMDFI GLP+T +G TVIWV+VDRLTKSAHF+PGKS
Sbjct: 1120 KEPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 1179

Query: 241  TFSVSKWAQIYIKEVVRLHGVPVSIVSDKDPRFMSNFWKSLRTALGTRLDFSTTFHPQTD 300
            T++ SKWAQ+Y+ E+VRLHGVPVSIVSD+D RF S FWK L+TA+GTRLDFST FHPQ D
Sbjct: 1180 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQAD 1239

Query: 301  GQTERLNQILEDMLRACALDFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG------ 360
            GQTERLNQ+LEDMLRACAL+FPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG      
Sbjct: 1240 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 1299

Query: 361  ------------------------------------------------------DKVFLK 420
                                                                  DKVFLK
Sbjct: 1300 VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIRDKVFLK 1359

Query: 421  VAPMKGVLRFGKKGKLSLQFIGPFEILEQVGPVAYCLALPPSFSTVHNVFHVSMLRRYMV 456
            VAPMKGVLRF ++GKLS +F+GPFEILE++GPVAY LALPPS STVH+VFHVSMLR+Y+ 
Sbjct: 1360 VAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVP 1419

[Close]

BLAST of Clc11G12810 vs. NCBI nr
Match: KAA0035480.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 704.5 bits (1817), Expect = 1.0e-198
Identity = 351/519 (67.63%), Postives = 402/519 (77.46%), Query Frame = 0


Query: 1    MRQRRWLELVKDYDVKILYHPGKANVVADALSRKAVHSAALITDQTPLCKDLERVGIAVA 60
            MRQRRWLELVKDYD +ILYHPGKANVVADALSRK  HSAALIT Q PL  DLER  I V+
Sbjct: 947  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHWDLERAEITVS 1006

Query: 61   LGEVT-------------------------------------SHKFSVSSDSGLSYHGRL 120
            +G VT                                     + +FS+SSD GL +  RL
Sbjct: 1007 VGAVTMPLAQLTVQPTLKQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRL 1066

Query: 121  CFPAGSVVKDELLSEAHNSPFSIHPGSTKMYQDLKRHYWWLNMKREVAEFVSKCPVCQQV 180
            C P+ S VK ELLSEAH+SPFS+HPGSTKMYQDLKR YWW NMKREVAEFVS+C VCQQV
Sbjct: 1067 CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQV 1126

Query: 181  KASRQKQAGLLHPLTVLEWKWENVSMDFIVGLPKTAKGHTVIWVIVDRLTKSAHFIPGKS 240
            KA RQK AGLL PL+V EWKWENVSMDFI GLP+T +G TVIWV+VDRLTKSAHF+PGKS
Sbjct: 1127 KALRQKPAGLLQPLSVPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 1186

Query: 241  TFSVSKWAQIYIKEVVRLHGVPVSIVSDKDPRFMSNFWKSLRTALGTRLDFSTTFHPQTD 300
            T++ SKWAQ+Y+ E+VRLHGVPVSIVSD+D RF S FWK L+TA+GTRLDFST FHPQTD
Sbjct: 1187 TYAASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 1246

Query: 301  GQTERLNQILEDMLRACALDFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY------- 360
            GQTERLNQ+LEDMLRACAL+FPGSWD HLHLMEFAYNNSYQATIGMAPFEALY       
Sbjct: 1247 GQTERLNQVLEDMLRACALEFPGSWDYHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 1306

Query: 361  -----------------------GDKVFLKVAPMKGVLRFGKKGKLSLQFIGPFEILEQV 420
                                   GDKVFLKVAPM+GVLRF ++GKLS +F+GPFEILE++
Sbjct: 1307 VYWGESRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERI 1366

Query: 421  GPVAYCLALPPSFSTVHNVFHVSMLRRYMVDPSHVIDFEPLQLNKDLSYEEKPVQVLARE 453
            GPVAY LALPPS STVH+VFHVSMLR+Y+ DPSHV+D+EPL+++++LSY E+PV+VLARE
Sbjct: 1367 GPVAYRLALPPSLSTVHDVFHVSMLRKYVSDPSHVVDYEPLEIDENLSYTEQPVEVLARE 1426

[Close]

BLAST of Clc11G12810 vs. NCBI nr
Match: KAA0043669.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 704.1 bits (1816), Expect = 1.4e-198
Identity = 353/550 (64.18%), Postives = 406/550 (73.82%), Query Frame = 0


Query: 1   MRQRRWLELVKDYDVKILYHPGKANVVADALSRKAVHSAALITDQTPLCKDLERVGIAVA 60
           MRQRRWLELVKDYD +ILYHPGKANVVADALSRK  HSAALIT Q PL +D+ER  I V+
Sbjct: 1   MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDIERAEIVVS 60

Query: 61  LGEVTSH-------------------------------------KFSVSSDSGLSYHGRL 120
           +G VT+                                      +FS+SSD GL +  RL
Sbjct: 61  VGAVTTQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL 120

Query: 121 CFPAGSVVKDELLSEAHNSPFSIHPGSTKMYQDLKRHYWWLNMKREVAEFVSKCPVCQQV 180
           C P+ S VK ELLSEAH+SPFS+HPGSTKMYQDLKR YWW NMKREVAEFVSKC VCQQV
Sbjct: 121 CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV 180

Query: 181 KASRQKQAGLLHPLTVLEWKWENVSMDFIVGLPKTAKGHTVIWVIVDRLTKSAHFIPGKS 240
           KA RQK AGLL PL++ EWKWENVSMDFI GLP+T +G TVIWV+VDRLTKSAHF+PGKS
Sbjct: 181 KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 240

Query: 241 TFSVSKWAQIYIKEVVRLHGVPVSIVSDKDPRFMSNFWKSLRTALGTRLDFSTTFHPQTD 300
           T++ SKWAQ+Y+ E+VRLHGVPVSIVSD+D RF S FWK L+TA+GTRLDFST FHPQTD
Sbjct: 241 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300

Query: 301 GQTERLNQILEDMLRACALDFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY------- 360
           GQTERLNQ+LEDMLRACAL+FP SWDSHLHLMEFAYNNSYQATIGMAPFEALY       
Sbjct: 301 GQTERLNQVLEDMLRACALEFPDSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSP 360

Query: 361 -----------------------------------------------------GDKVFLK 420
                                                                GDKVFLK
Sbjct: 361 VCWDEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK 420

Query: 421 VAPMKGVLRFGKKGKLSLQFIGPFEILEQVGPVAYCLALPPSFSTVHNVFHVSMLRRYMV 454
           VAPMKGVLRF ++GKLS +F+GPFEILE++GPVAY LALPPS STVH+VFHVSMLR+Y+ 
Sbjct: 421 VAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVP 480

[Close]

BLAST of Clc11G12810 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 2.4e-44
Identity = 122/462 (26.41%), Postives = 197/462 (42.64%), Query Frame = 0


Query: 2    RQRRWLELVKDYDVKILYHPGKANVVADALSRKAVHSAAL----------------ITDQ 61
            R  RW   ++D++ +I Y PG AN +ADALSR    +  +                ITD 
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDD 859

Query: 62   ------TPLCKDLERVGIAVALGEVTSHKFSVSSDSGLSYHGRLCFPAGSVVKDELLSEA 121
                  T    D + + +     +       +     ++   ++  P  + +   ++ + 
Sbjct: 860  FKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKY 919

Query: 122  HNSPFSIHPGSTKMYQDLKRHYWWLNMKREVAEFVSKCPVCQQVKASRQKQAGLLHPLTV 181
            H     IHPG   +   + R + W  +++++ E+V  C  CQ  K+   K  G L P+  
Sbjct: 920  HEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPP 979

Query: 182  LEWKWENVSMDFIVGLPKTAKGHTVIWVIVDRLTKSAHFIPGKSTFSVSKWAQIYIKEVV 241
             E  WE++SMDFI  LP+++ G+  ++V+VDR +K A  +P   + +  + A+++ + V+
Sbjct: 980  SERPWESLSMDFITALPESS-GYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVI 1039

Query: 242  RLHGVPVSIVSDKDPRFMSNFWKSLRTALGTRLDFSTTFHPQTDGQTERLNQILEDMLRA 301
               G P  I++D D  F S  WK         + FS  + PQTDGQTER NQ +E +LR 
Sbjct: 1040 AYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRC 1099

Query: 302  CALDFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY----------------------- 361
                 P +W  H+ L++ +YNN+  +   M PFE ++                       
Sbjct: 1100 VCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQ 1159

Query: 362  ------------------------------------GDKVFLKVAPMKGVLRFGKKGKLS 382
                                                GD V +K     G L   K  KL+
Sbjct: 1160 ETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFLH--KSNKLA 1219

[Close]

BLAST of Clc11G12810 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 2.4e-44
Identity = 122/462 (26.41%), Postives = 197/462 (42.64%), Query Frame = 0


Query: 2    RQRRWLELVKDYDVKILYHPGKANVVADALSRKAVHSAAL----------------ITDQ 61
            R  RW   ++D++ +I Y PG AN +ADALSR    +  +                ITD 
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDD 859

Query: 62   ------TPLCKDLERVGIAVALGEVTSHKFSVSSDSGLSYHGRLCFPAGSVVKDELLSEA 121
                  T    D + + +     +       +     ++   ++  P  + +   ++ + 
Sbjct: 860  FKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKY 919

Query: 122  HNSPFSIHPGSTKMYQDLKRHYWWLNMKREVAEFVSKCPVCQQVKASRQKQAGLLHPLTV 181
            H     IHPG   +   + R + W  +++++ E+V  C  CQ  K+   K  G L P+  
Sbjct: 920  HEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPP 979

Query: 182  LEWKWENVSMDFIVGLPKTAKGHTVIWVIVDRLTKSAHFIPGKSTFSVSKWAQIYIKEVV 241
             E  WE++SMDFI  LP+++ G+  ++V+VDR +K A  +P   + +  + A+++ + V+
Sbjct: 980  SERPWESLSMDFITALPESS-GYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVI 1039

Query: 242  RLHGVPVSIVSDKDPRFMSNFWKSLRTALGTRLDFSTTFHPQTDGQTERLNQILEDMLRA 301
               G P  I++D D  F S  WK         + FS  + PQTDGQTER NQ +E +LR 
Sbjct: 1040 AYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRC 1099

Query: 302  CALDFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY----------------------- 361
                 P +W  H+ L++ +YNN+  +   M PFE ++                       
Sbjct: 1100 VCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQ 1159

Query: 362  ------------------------------------GDKVFLKVAPMKGVLRFGKKGKLS 382
                                                GD V +K     G L   K  KL+
Sbjct: 1160 ETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFLH--KSNKLA 1219

[Close]

BLAST of Clc11G12810 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 2.4e-44
Identity = 122/462 (26.41%), Postives = 197/462 (42.64%), Query Frame = 0


Query: 2    RQRRWLELVKDYDVKILYHPGKANVVADALSRKAVHSAAL----------------ITDQ 61
            R  RW   ++D++ +I Y PG AN +ADALSR    +  +                ITD 
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDD 859

Query: 62   ------TPLCKDLERVGIAVALGEVTSHKFSVSSDSGLSYHGRLCFPAGSVVKDELLSEA 121
                  T    D + + +     +       +     ++   ++  P  + +   ++ + 
Sbjct: 860  FKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKY 919

Query: 122  HNSPFSIHPGSTKMYQDLKRHYWWLNMKREVAEFVSKCPVCQQVKASRQKQAGLLHPLTV 181
            H     IHPG   +   + R + W  +++++ E+V  C  CQ  K+   K  G L P+  
Sbjct: 920  HEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPP 979

Query: 182  LEWKWENVSMDFIVGLPKTAKGHTVIWVIVDRLTKSAHFIPGKSTFSVSKWAQIYIKEVV 241
             E  WE++SMDFI  LP+++ G+  ++V+VDR +K A  +P   + +  + A+++ + V+
Sbjct: 980  SERPWESLSMDFITALPESS-GYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVI 1039

Query: 242  RLHGVPVSIVSDKDPRFMSNFWKSLRTALGTRLDFSTTFHPQTDGQTERLNQILEDMLRA 301
               G P  I++D D  F S  WK         + FS  + PQTDGQTER NQ +E +LR 
Sbjct: 1040 AYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRC 1099

Query: 302  CALDFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY----------------------- 361
                 P +W  H+ L++ +YNN+  +   M PFE ++                       
Sbjct: 1100 VCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQ 1159

Query: 362  ------------------------------------GDKVFLKVAPMKGVLRFGKKGKLS 382
                                                GD V +K     G L   K  KL+
Sbjct: 1160 ETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFLH--KSNKLA 1219

[Close]

BLAST of Clc11G12810 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 2.4e-44
Identity = 122/462 (26.41%), Postives = 197/462 (42.64%), Query Frame = 0


Query: 2    RQRRWLELVKDYDVKILYHPGKANVVADALSRKAVHSAAL----------------ITDQ 61
            R  RW   ++D++ +I Y PG AN +ADALSR    +  +                ITD 
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDD 859

Query: 62   ------TPLCKDLERVGIAVALGEVTSHKFSVSSDSGLSYHGRLCFPAGSVVKDELLSEA 121
                  T    D + + +     +       +     ++   ++  P  + +   ++ + 
Sbjct: 860  FKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKY 919

Query: 122  HNSPFSIHPGSTKMYQDLKRHYWWLNMKREVAEFVSKCPVCQQVKASRQKQAGLLHPLTV 181
            H     IHPG   +   + R + W  +++++ E+V  C  CQ  K+   K  G L P+  
Sbjct: 920  HEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPP 979

Query: 182  LEWKWENVSMDFIVGLPKTAKGHTVIWVIVDRLTKSAHFIPGKSTFSVSKWAQIYIKEVV 241
             E  WE++SMDFI  LP+++ G+  ++V+VDR +K A  +P   + +  + A+++ + V+
Sbjct: 980  SERPWESLSMDFITALPESS-GYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVI 1039

Query: 242  RLHGVPVSIVSDKDPRFMSNFWKSLRTALGTRLDFSTTFHPQTDGQTERLNQILEDMLRA 301
               G P  I++D D  F S  WK         + FS  + PQTDGQTER NQ +E +LR 
Sbjct: 1040 AYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRC 1099

Query: 302  CALDFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY----------------------- 361
                 P +W  H+ L++ +YNN+  +   M PFE ++                       
Sbjct: 1100 VCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQ 1159

Query: 362  ------------------------------------GDKVFLKVAPMKGVLRFGKKGKLS 382
                                                GD V +K     G L   K  KL+
Sbjct: 1160 ETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFLH--KSNKLA 1219

[Close]

BLAST of Clc11G12810 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 2.4e-44
Identity = 122/462 (26.41%), Postives = 197/462 (42.64%), Query Frame = 0


Query: 2    RQRRWLELVKDYDVKILYHPGKANVVADALSRKAVHSAAL----------------ITDQ 61
            R  RW   ++D++ +I Y PG AN +ADALSR    +  +                ITD 
Sbjct: 800  RLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDD 859

Query: 62   ------TPLCKDLERVGIAVALGEVTSHKFSVSSDSGLSYHGRLCFPAGSVVKDELLSEA 121
                  T    D + + +     +       +     ++   ++  P  + +   ++ + 
Sbjct: 860  FKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKY 919

Query: 122  HNSPFSIHPGSTKMYQDLKRHYWWLNMKREVAEFVSKCPVCQQVKASRQKQAGLLHPLTV 181
            H     IHPG   +   + R + W  +++++ E+V  C  CQ  K+   K  G L P+  
Sbjct: 920  HEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPP 979

Query: 182  LEWKWENVSMDFIVGLPKTAKGHTVIWVIVDRLTKSAHFIPGKSTFSVSKWAQIYIKEVV 241
             E  WE++SMDFI  LP+++ G+  ++V+VDR +K A  +P   + +  + A+++ + V+
Sbjct: 980  SERPWESLSMDFITALPESS-GYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVI 1039

Query: 242  RLHGVPVSIVSDKDPRFMSNFWKSLRTALGTRLDFSTTFHPQTDGQTERLNQILEDMLRA 301
               G P  I++D D  F S  WK         + FS  + PQTDGQTER NQ +E +LR 
Sbjct: 1040 AYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRC 1099

Query: 302  CALDFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY----------------------- 361
                 P +W  H+ L++ +YNN+  +   M PFE ++                       
Sbjct: 1100 VCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQ 1159

Query: 362  ------------------------------------GDKVFLKVAPMKGVLRFGKKGKLS 382
                                                GD V +K     G L   K  KL+
Sbjct: 1160 ETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFLH--KSNKLA 1219

[Close]

BLAST of Clc11G12810 vs. ExPASy TrEMBL
Match: A0A5A7TGX4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold529G00100 PE=4 SV=1)

HSP 1 Score: 710.3 bits (1832), Expect = 9.2e-201
Identity = 349/515 (67.77%), Postives = 405/515 (78.64%), Query Frame = 0


Query: 1    MRQRRWLELVKDYDVKILYHPGKANVVADALSRKAVHSAALITDQTPLCKDLERVGIAVA 60
            MRQRRWLELVKDYD +ILYHPGKANVVADALSRK  HSAALIT Q PL +DLER  IAV+
Sbjct: 1037 MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 1096

Query: 61   LGEVT-------------------------------------SHKFSVSSDSGLSYHGRL 120
            +G VT                                     + +FS+SSD GL +   L
Sbjct: 1097 VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERHL 1156

Query: 121  CFPAGSVVKDELLSEAHNSPFSIHPGSTKMYQDLKRHYWWLNMKREVAEFVSKCPVCQQV 180
            C P+ S VK ELLSEAH+SPFS+HPGSTKMYQDLKR YWW NMKREVAEFVS+C VCQQV
Sbjct: 1157 CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWHNMKREVAEFVSRCLVCQQV 1216

Query: 181  KASRQKQAGLLHPLTVLEWKWENVSMDFIVGLPKTAKGHTVIWVIVDRLTKSAHFIPGKS 240
            KA RQK AGLL PL++ EWKWENVSMDFI GLP+T +G TVIWV+VDRLTK AHF+PGKS
Sbjct: 1217 KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKLAHFVPGKS 1276

Query: 241  TFSVSKWAQIYIKEVVRLHGVPVSIVSDKDPRFMSNFWKSLRTALGTRLDFSTTFHPQTD 300
            T++ SKWAQ+Y+ E+VRLHGVPVSIVS++D RF S FWK L+TA+GTRLDFST FHPQTD
Sbjct: 1277 TYTASKWAQLYMSEIVRLHGVPVSIVSNRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 1336

Query: 301  GQTERLNQILEDMLRACALDFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY------- 360
            GQTERLNQ+LEDMLRACAL+FPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY       
Sbjct: 1337 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 1396

Query: 361  -----------------GDKVFLKVAPMKGVLRFGKKGKLSLQFIGPFEILEQVGPVAYC 420
                             GDKVFLKVAPM+GVLRF ++GKLS +F+GPFEILE++GPVAY 
Sbjct: 1397 VCWGEVDVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYR 1456

Query: 421  LALPPSFSTVHNVFHVSMLRRYMVDPSHVIDFEPLQLNKDLSYEEKPVQVLAREVKVLRN 455
            L LPPS STVH+V HVSMLR+Y+ DPSHV+D+EPL+++++LSY E+PV+VLAREVK LRN
Sbjct: 1457 LVLPPSLSTVHDVIHVSMLRKYVPDPSHVVDYEPLEIDENLSYAEQPVEVLAREVKTLRN 1516

[Close]

BLAST of Clc11G12810 vs. ExPASy TrEMBL
Match: A0A5A7U7V9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00950 PE=4 SV=1)

HSP 1 Score: 709.1 bits (1829), Expect = 2.1e-200
Identity = 356/552 (64.49%), Postives = 410/552 (74.28%), Query Frame = 0


Query: 1    MRQRRWLELVKDYDVKILYHPGKANVVADALSRKAVHSAALITDQTPLCKDLERVGIAVA 60
            MRQRRWLELVKDYD +ILYHPGKANVVADALSRK  HSAALIT Q PL +DLER  IAV+
Sbjct: 897  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 956

Query: 61   LGEVT-------------------------------------SHKFSVSSDSGLSYHGRL 120
            +G VT                                     + +FS+SSD GL +  RL
Sbjct: 957  VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL 1016

Query: 121  CFPAGSVVKDELLSEAHNSPFSIHPGSTKMYQDLKRHYWWLNMKREVAEFVSKCPVCQQV 180
            C P+ S VK ELLSEAH+SPFS+HPGSTKMYQDLKR YWW NMKREVAEFVSKC VCQQV
Sbjct: 1017 CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV 1076

Query: 181  KASRQKQAGLLHPLTVLEWKWENVSMDFIVGLPKTAKGHTVIWVIVDRLTKSAHFIPGKS 240
            KA RQK AGLL PL++ EWKWENVSMDFI GLP+T +G TVIWV+VDRLTKSAHF+PGKS
Sbjct: 1077 KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 1136

Query: 241  TFSVSKWAQIYIKEVVRLHGVPVSIVSDKDPRFMSNFWKSLRTALGTRLDFSTTFHPQTD 300
            T++ SKWAQ+Y+ E+VRLHGVPVSIVSD+D RF S FWK L+TA+GTRLDFST FHPQTD
Sbjct: 1137 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 1196

Query: 301  GQTERLNQILEDMLRACALDFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY------- 360
            GQTERLNQ+LEDMLRACAL+FPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY       
Sbjct: 1197 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSP 1256

Query: 361  -----------------------------------------------------GDKVFLK 420
                                                                 GDKVFLK
Sbjct: 1257 VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLK 1316

Query: 421  VAPMKGVLRFGKKGKLSLQFIGPFEILEQVGPVAYCLALPPSFSTVHNVFHVSMLRRYMV 456
            VAPMKGVLRF ++GKLS +F+GPFEILE++GPVAY LALPPS STVH+VFHVSMLR+Y+ 
Sbjct: 1317 VAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVP 1376

[Close]

BLAST of Clc11G12810 vs. ExPASy TrEMBL
Match: A0A5A7UAA8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00800 PE=4 SV=1)

HSP 1 Score: 708.4 bits (1827), Expect = 3.5e-200
Identity = 355/552 (64.31%), Postives = 408/552 (73.91%), Query Frame = 0


Query: 1    MRQRRWLELVKDYDVKILYHPGKANVVADALSRKAVHSAALITDQTPLCKDLERVGIAVA 60
            MRQRRWLELVKDYD +ILYHPGKANVVADALSRK  HSAALIT Q PL +DLER  IAV+
Sbjct: 940  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVS 999

Query: 61   LGEVTSH-------------------------------------KFSVSSDSGLSYHGRL 120
            +G VT                                       +FS+SSD GLS+ GRL
Sbjct: 1000 VGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLSFEGRL 1059

Query: 121  CFPAGSVVKDELLSEAHNSPFSIHPGSTKMYQDLKRHYWWLNMKREVAEFVSKCPVCQQV 180
            C P+ S VK ELL EAH+SPFS+HPGSTKMYQDLKR YWW NMKREVAEFVSKC VCQQV
Sbjct: 1060 CVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV 1119

Query: 181  KASRQKQAGLLHPLTVLEWKWENVSMDFIVGLPKTAKGHTVIWVIVDRLTKSAHFIPGKS 240
            K  RQK AGLL PL++ EWKWENVSMDFI GLP+T +G TVIWV+VDRLTKSAHF+PGKS
Sbjct: 1120 KEPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 1179

Query: 241  TFSVSKWAQIYIKEVVRLHGVPVSIVSDKDPRFMSNFWKSLRTALGTRLDFSTTFHPQTD 300
            T++ SKWAQ+Y+ E+VRLHGVPVSIVSD+D RF S FWK L+TA+GTRLDFST FHPQ D
Sbjct: 1180 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQAD 1239

Query: 301  GQTERLNQILEDMLRACALDFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG------ 360
            GQTERLNQ+LEDMLRACAL+FPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG      
Sbjct: 1240 GQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 1299

Query: 361  ------------------------------------------------------DKVFLK 420
                                                                  DKVFLK
Sbjct: 1300 VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEIRDKVFLK 1359

Query: 421  VAPMKGVLRFGKKGKLSLQFIGPFEILEQVGPVAYCLALPPSFSTVHNVFHVSMLRRYMV 456
            VAPMKGVLRF ++GKLS +F+GPFEILE++GPVAY LALPPS STVH+VFHVSMLR+Y+ 
Sbjct: 1360 VAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVP 1419

[Close]

BLAST of Clc11G12810 vs. ExPASy TrEMBL
Match: A0A5A7SWR6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G001300 PE=4 SV=1)

HSP 1 Score: 704.5 bits (1817), Expect = 5.1e-199
Identity = 351/519 (67.63%), Postives = 402/519 (77.46%), Query Frame = 0


Query: 1    MRQRRWLELVKDYDVKILYHPGKANVVADALSRKAVHSAALITDQTPLCKDLERVGIAVA 60
            MRQRRWLELVKDYD +ILYHPGKANVVADALSRK  HSAALIT Q PL  DLER  I V+
Sbjct: 947  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHWDLERAEITVS 1006

Query: 61   LGEVT-------------------------------------SHKFSVSSDSGLSYHGRL 120
            +G VT                                     + +FS+SSD GL +  RL
Sbjct: 1007 VGAVTMPLAQLTVQPTLKQRIIDAQGNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRL 1066

Query: 121  CFPAGSVVKDELLSEAHNSPFSIHPGSTKMYQDLKRHYWWLNMKREVAEFVSKCPVCQQV 180
            C P+ S VK ELLSEAH+SPFS+HPGSTKMYQDLKR YWW NMKREVAEFVS+C VCQQV
Sbjct: 1067 CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQV 1126

Query: 181  KASRQKQAGLLHPLTVLEWKWENVSMDFIVGLPKTAKGHTVIWVIVDRLTKSAHFIPGKS 240
            KA RQK AGLL PL+V EWKWENVSMDFI GLP+T +G TVIWV+VDRLTKSAHF+PGKS
Sbjct: 1127 KALRQKPAGLLQPLSVPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 1186

Query: 241  TFSVSKWAQIYIKEVVRLHGVPVSIVSDKDPRFMSNFWKSLRTALGTRLDFSTTFHPQTD 300
            T++ SKWAQ+Y+ E+VRLHGVPVSIVSD+D RF S FWK L+TA+GTRLDFST FHPQTD
Sbjct: 1187 TYAASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 1246

Query: 301  GQTERLNQILEDMLRACALDFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY------- 360
            GQTERLNQ+LEDMLRACAL+FPGSWD HLHLMEFAYNNSYQATIGMAPFEALY       
Sbjct: 1247 GQTERLNQVLEDMLRACALEFPGSWDYHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSP 1306

Query: 361  -----------------------GDKVFLKVAPMKGVLRFGKKGKLSLQFIGPFEILEQV 420
                                   GDKVFLKVAPM+GVLRF ++GKLS +F+GPFEILE++
Sbjct: 1307 VYWGESRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERI 1366

Query: 421  GPVAYCLALPPSFSTVHNVFHVSMLRRYMVDPSHVIDFEPLQLNKDLSYEEKPVQVLARE 453
            GPVAY LALPPS STVH+VFHVSMLR+Y+ DPSHV+D+EPL+++++LSY E+PV+VLARE
Sbjct: 1367 GPVAYRLALPPSLSTVHDVFHVSMLRKYVSDPSHVVDYEPLEIDENLSYTEQPVEVLARE 1426

[Close]

BLAST of Clc11G12810 vs. ExPASy TrEMBL
Match: A0A5A7TR61 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19461G00010 PE=4 SV=1)

HSP 1 Score: 704.1 bits (1816), Expect = 6.6e-199
Identity = 353/550 (64.18%), Postives = 406/550 (73.82%), Query Frame = 0


Query: 1   MRQRRWLELVKDYDVKILYHPGKANVVADALSRKAVHSAALITDQTPLCKDLERVGIAVA 60
           MRQRRWLELVKDYD +ILYHPGKANVVADALSRK  HSAALIT Q PL +D+ER  I V+
Sbjct: 1   MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDIERAEIVVS 60

Query: 61  LGEVTSH-------------------------------------KFSVSSDSGLSYHGRL 120
           +G VT+                                      +FS+SSD GL +  RL
Sbjct: 61  VGAVTTQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRL 120

Query: 121 CFPAGSVVKDELLSEAHNSPFSIHPGSTKMYQDLKRHYWWLNMKREVAEFVSKCPVCQQV 180
           C P+ S VK ELLSEAH+SPFS+HPGSTKMYQDLKR YWW NMKREVAEFVSKC VCQQV
Sbjct: 121 CVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV 180

Query: 181 KASRQKQAGLLHPLTVLEWKWENVSMDFIVGLPKTAKGHTVIWVIVDRLTKSAHFIPGKS 240
           KA RQK AGLL PL++ EWKWENVSMDFI GLP+T +G TVIWV+VDRLTKSAHF+PGKS
Sbjct: 181 KAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKS 240

Query: 241 TFSVSKWAQIYIKEVVRLHGVPVSIVSDKDPRFMSNFWKSLRTALGTRLDFSTTFHPQTD 300
           T++ SKWAQ+Y+ E+VRLHGVPVSIVSD+D RF S FWK L+TA+GTRLDFST FHPQTD
Sbjct: 241 TYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTD 300

Query: 301 GQTERLNQILEDMLRACALDFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY------- 360
           GQTERLNQ+LEDMLRACAL+FP SWDSHLHLMEFAYNNSYQATIGMAPFEALY       
Sbjct: 301 GQTERLNQVLEDMLRACALEFPDSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSP 360

Query: 361 -----------------------------------------------------GDKVFLK 420
                                                                GDKVFLK
Sbjct: 361 VCWDEVGEQRLMGPELVQSTNEAVQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLK 420

Query: 421 VAPMKGVLRFGKKGKLSLQFIGPFEILEQVGPVAYCLALPPSFSTVHNVFHVSMLRRYMV 454
           VAPMKGVLRF ++GKLS +F+GPFEILE++GPVAY LALPPS STVH+VFHVSMLR+Y+ 
Sbjct: 421 VAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVP 480

[Close]

BLAST of Clc11G12810 vs. TAIR 10
Match: AT5G50260.1 (Cysteine proteinases superfamily protein )

HSP 1 Score: 144.8 bits (364), Expect = 3.0e-34
Identity = 74/122 (60.66%), Postives = 87/122 (71.31%), Query Frame = 0


Query: 692 SSPIVKIDGYESVPEN-ENALMQVVANQPVSVAIDAAGRDFQFYWRQVPSSLEQSIDSLG 751
           ++P+V IDG+E VP+N E+ LM+ VANQPVSVAIDA G DFQFY   V +         G
Sbjct: 228 NAPVVSIDGHEDVPKNSEDDLMKAVANQPVSVAIDAGGSDFQFYSEGVFTG------RCG 287

Query: 752 TELNHGVVAIGYGTTEDGTDYWILRNSWGIGWREDDYINMKRS---PEGLCGIAMEASYP 810
           TELNHGV  +GYGTT DGT YWI++NSWG  W E  YI M+R     EGLCGIAMEASYP
Sbjct: 288 TELNHGVAVVGYGTTIDGTKYWIVKNSWGEEWGEKGYIRMQRGIRHKEGLCGIAMEASYP 343

[Close]

BLAST of Clc11G12810 vs. TAIR 10
Match: AT3G48340.1 (Cysteine proteinases superfamily protein )

HSP 1 Score: 137.9 bits (346), Expect = 3.6e-32
Identity = 74/119 (62.18%), Postives = 84/119 (70.59%), Query Frame = 0


Query: 695 IVKIDGYESVPEN-ENALMQVVANQPVSVAIDAAGRDFQFYWRQVPSSLEQSIDSLGTEL 754
           +V IDG+E VPEN ENAL++ VANQPVSVAIDA   DFQFY   V +       S GTEL
Sbjct: 233 LVTIDGHEDVPENDENALLKAVANQPVSVAIDAGSSDFQFYSEGVFTG------SCGTEL 292

Query: 755 NHGVVAIGYGTTEDGTDYWILRNSWGIGWREDDYINMKR---SPEGLCGIAMEASYPIK 810
           NHGV A+GYG +E G  YWI+RNSWG  W E  YI ++R    PEG CGIAMEASYPIK
Sbjct: 293 NHGVAAVGYG-SERGKKYWIVRNSWGAEWGEGGYIKIEREIDEPEGRCGIAMEASYPIK 344

[Close]

BLAST of Clc11G12810 vs. TAIR 10
Match: AT5G43060.1 (Granulin repeat cysteine protease family protein )

HSP 1 Score: 129.8 bits (325), Expect = 9.9e-30
Identity = 70/122 (57.38%), Postives = 84/122 (68.85%), Query Frame = 0


Query: 692 SSPIVKIDGYESVPEN-ENALMQVVANQPVSVAIDAAGRDFQFYWRQVPSSLEQSIDSLG 751
           ++ +V ID YE VPEN E +L + +A+QP+SVAI+A GR FQ Y   V   L       G
Sbjct: 240 NAKVVTIDSYEDVPENSEASLKKALAHQPISVAIEAGGRAFQLYSSGVFDGL------CG 299

Query: 752 TELNHGVVAIGYGTTEDGTDYWILRNSWGIGWREDDYINMKR---SPEGLCGIAMEASYP 810
           TEL+HGVVA+GYG TE+G DYWI+RNSWG  W E  YI M R   +P G CGIAMEASYP
Sbjct: 300 TELDHGVVAVGYG-TENGKDYWIVRNSWGNRWGESGYIKMARNIEAPTGKCGIAMEASYP 354

[Close]

BLAST of Clc11G12810 vs. TAIR 10
Match: AT3G48350.1 (Cysteine proteinases superfamily protein )

HSP 1 Score: 129.0 bits (323), Expect = 1.7e-29
Identity = 68/123 (55.28%), Postives = 80/123 (65.04%), Query Frame = 0


Query: 691 ISSPIVKIDGYESVPEN-ENALMQVVANQPVSVAIDAAGRDFQFYWRQVPSSLEQSIDSL 750
           I    V IDG+E VPEN E  L++ VA+QPVSVAIDA   DFQ Y   V       I   
Sbjct: 228 IGGETVTIDGHEHVPENDEEELLKAVAHQPVSVAIDAGSSDFQLYSEGV------FIGEC 287

Query: 751 GTELNHGVVAIGYGTTEDGTDYWILRNSWGIGWREDDYINMKR---SPEGLCGIAMEASY 810
           GT+LNHGVV +GYG T++GT YWI+RNSWG  W E  Y+ ++R     EG CGIAMEASY
Sbjct: 288 GTQLNHGVVIVGYGETKNGTKYWIVRNSWGPEWGEGGYVRIERGISENEGRCGIAMEASY 344

[Close]

BLAST of Clc11G12810 vs. TAIR 10
Match: AT4G36880.1 (cysteine proteinase1 )

HSP 1 Score: 123.6 bits (309), Expect = 7.1e-28
Identity = 65/124 (52.42%), Postives = 85/124 (68.55%), Query Frame = 0


Query: 692 SSPIVKIDGYESVP-ENENALMQVVANQPVSVAIDAAGRDFQFYWRQVPSSLEQSIDSLG 751
           +S +V IDGYE VP ++E AL + ++ QPVSVAI+A GR FQ Y   + +       S G
Sbjct: 247 NSRVVSIDGYEDVPTKDETALKKAISYQPVSVAIEAGGRIFQHYQSGIFTG------SCG 306

Query: 752 TELNHGVVAIGYGTTEDGTDYWILRNSWGIGWREDDYINMKR----SPEGLCGIAMEASY 811
           T L+H VVA+GYG +E+G DYWI+RNSWG  W E+ YI M+R    S  G CGIA+EASY
Sbjct: 307 TNLDHAVVAVGYG-SENGVDYWIVRNSWGPRWGEEGYIRMERNLAASKSGKCGIAVEASY 363

The following BLAST results are available for this feature:

BLAST of Clc11G12810 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0040695.1	1.9e-200	67.77	pol protein [Cucumis melo var. makuwa]	[more]
KAA0051368.1	4.2e-200	64.49	pol protein [Cucumis melo var. makuwa]	[more]
KAA0051357.1	7.2e-200	64.31	pol protein [Cucumis melo var. makuwa]	[more]
KAA0035480.1	1.0e-198	67.63	pol protein [Cucumis melo var. makuwa]	[more]
KAA0043669.1	1.4e-198	64.18	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Clc11G12810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	2.4e-44	26.41	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	2.4e-44	26.41	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	2.4e-44	26.41	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	2.4e-44	26.41	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	2.4e-44	26.41	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Clc11G12810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TGX4	9.2e-201	67.77	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold52...	[more]
A0A5A7U7V9	2.1e-200	64.49	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55...	[more]
A0A5A7UAA8	3.5e-200	64.31	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55...	[more]
A0A5A7SWR6	5.1e-199	67.63	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold28...	[more]
A0A5A7TR61	6.6e-199	64.18	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19461G00010 ...	[more]

BLAST of Clc11G12810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50260.1	3.0e-34	60.66	Cysteine proteinases superfamily protein	[more]
AT3G48340.1	3.6e-32	62.18	Cysteine proteinases superfamily protein	[more]
AT5G43060.1	9.9e-30	57.38	Granulin repeat cysteine protease family protein	[more]
AT3G48350.1	1.7e-29	55.28	Cysteine proteinases superfamily protein	[more]
AT4G36880.1	7.1e-28	52.42	cysteine proteinase1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000668	Peptidase C1A, papain C-terminal	SMART	SM00645	pept_c1	coord: 599..808 e-value: 2.0E-13 score: 60.6
IPR000668	Peptidase C1A, papain C-terminal	PFAM	PF00112	Peptidase_C1	coord: 692..808 e-value: 1.1E-26 score: 94.4
None	No IPR available	GENE3D	1.10.340.70		coord: 63..144 e-value: 4.3E-17 score: 64.1
None	No IPR available	GENE3D	3.90.70.10	Cysteine proteinases	coord: 600..809 e-value: 3.2E-34 score: 121.0
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 96..313
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 92..145 e-value: 4.3E-17 score: 61.9
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 156..330 e-value: 2.0E-42 score: 146.7
IPR025660	Cysteine peptidase, histidine active site	PROSITE	PS00639	THIOL_PROTEASE_HIS	coord: 753..763
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 152..319 score: 18.245016
IPR039417	Papain-like cysteine endopeptidase	CDD	cd02248	Peptidase_C1A	coord: 649..807 e-value: 7.98739E-35 score: 130.051
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	54001	Cysteine proteinases	coord: 600..808
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 157..313

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc11G12810.1	Clc11G12810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding