Clc11G12530 (gene) Watermelon (cordophanus) v2

Overview
NameClc11G12530
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationClcChr11: 21485513 .. 21487891 (+)
RNA-Seq ExpressionClc11G12530
SyntenyClc11G12530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAACACAGATGATATGCACAAACACTACAACCTCTGCCATTCGTGGACAAAAATTCCTCCTCACGCTTCTTAAAAAGGCCACTACACTTCCCCAACTCCTTCAAATCCAAGCACAGTTAATCCTCCACGGTATTCACTCTGATATCTCTTCGATTACCAAGCTTACCCACAAGTTCTTCGACCTCGGGGCCATTCGCCATGTGCATCAACTCTTCGCTAAGGTCTCCAAACCCGATCTATTCTTGTTCAATGTCCTTATAAGAGGCTTCTCCGACAATAGTTTGCCTAAATCTTCGATCTCTCTCTATACCCATTTGAGAAAAAGGACTAATCTTAGGCCAGACAATTTCACTTATGCATTTGCGATTTCAGCTGCTTCGAGGTTTGAGGATGAGAGGGTCGGCGTCTTGTTGCACGCACACTCCATTGTTGATGGGGTGGCGTCAAATTTGTTTGTTGGGTCTGCAATTGTTGATTTGTACTTTAAATTCACGCGCGCCGAGTTGGCGTGGAAGGTGTTTGATGTAATGCCTGAGAGGGATACGGTTCTCTGGAACACGATGATATCTGGGTTTTCCAGGAATTCTTGTTTTGAGGACTCCATACGTGTTTTTGTGGATATGCTCGATGTTGGGTTGCCATTTGATTCTACAACTTTGGCTGCGGTGCTTACAGCAGTGGCGGAGTTGCAGGAATATAGATTAGGGATGGGTATCCAATGTTTGGCTTTAAAAAAAGGACTCCATTCTGATGTTTATGTGCTTACAGGATTGATATCATTATATTCAAAATGCGGGAAGAGTGACAAAGGAAGGTTGTTGTTTGATCAGATTGATCAGCCAGATATAATATCTTATAACGCAATGATTTCTGGTTATACATTCAATCATGAAACTGGGTCAGCAGTTACACTCTTCAGGGAATTGCTTGCCTCCGGACGGGGTATTAATTCAAGCACTTTGGTGGGCTTGATTCCAGTTTTTTCGCCATTCGGCCATCTGCAACTTACTCGCTTGATTCAAAATTTAAGCATGAAAATTGGTATTATTTTGCAACCTTCGGTTTCAACTGCTCTAACTACTGTTTACTGTCGACTAAATGAAGTACAATTTGCAAGGCAGTTGTTTGATGAATCTCCAGAGAAAAGTTTGGCTTCTTGGAATGCCATGATATCAGGGTATACTCAAAATGGGTTGACAGAGAGTGCAATTTCTCTTTTCCAAGAAATGATGCCTCAACTCAGCCCAAATCCTGTTACTGTAACCAGTATACTTTCAGCTTGTGCGCAACTTGGAGCTCTAAGTATTGGAAAATGGGTTCATGGCTTGATTAAGAGTGAAAGACTTGAATCAAACATATATGTCTCTACTGCATTAGTTGATATGTATGCAAAATGTGGTAGCATCGTGGAGGCTCGTCAATTATTTGACTTGATGGCAGAAAAGAATGCAGTAACCTGGAATGCCATGATAACTGGTTATGGTCTCCATGGACATGGCAAGGAAGCACTAAACCTCTTTAATGAGATGTTGCAATCTGGGATTCCACCGACAGGGGTTACTTTCCTTTCTATCTTGTATGCTTGCAGTCACTCCGGCTTGGTGAGAGAGGGAAATGAAATTTTCCACTCTATGGTTAACAATTATGGTTTTCAGCCCATGAGCGAGCACTACGCTTGCATGGTTGACATACTTGGGAGAGCTGGACAGCTAACAAATGCCTTGGAGTTTATTGAAAGAATGCCACTCGAGCCTGGCCCAGCTGTTTGGGGTGCACTGCTTGGCGCTTGCATGATTCACAAGAATACGGACATAGCCCATGTTGCTTCCAAAAGACTTTTCCAATTGGACCCAGAAAACGTGGGGTACTATGTCCTACTTTCAAATATATATTCTACTGACAGGAACTTCCCCAAAGCTGCTTCAGTACGACAAGTAGTTAAGAAGAGAAAACTAGCAAAGACGCCTGGTTGCACTCTAATTGAGATTGGCAATCAACAATATGTGTTCACATCTGGTGATCAGTCCCATCCTCAGGCCGCAGCCATTTTTGCCATGCTGGAGAAGTTAACAGGGAAAATGAGAGAGGCTGGATATCAGGCAGAAACTGTTGCTACTGCTTTGCATGATGTAGAGGATGAAGAGAAGGAGTTAATGGTGAATGTACACAGTGAAAAATTAGCAATTGCTTTTGGGCTTATTTCAACTGAGCCTGGAACTGAAATTAGGATTATCAAAAACCTCCGAGTTTGTCTTGACTGTCATACTGCAACTAAATTTATATCAAAGATCACTGAGAGAGTGATTGTGGTTAGGGATGCTAATAGATTCCATCATTTCAAAAATGGTATTTGCTCATGTGGAGACTACTGGTGA

mRNA sequence

ATGGTAACACAGATGATATGCACAAACACTACAACCTCTGCCATTCGTGGACAAAAATTCCTCCTCACGCTTCTTAAAAAGGCCACTACACTTCCCCAACTCCTTCAAATCCAAGCACAGTTAATCCTCCACGGTATTCACTCTGATATCTCTTCGATTACCAAGCTTACCCACAAGTTCTTCGACCTCGGGGCCATTCGCCATGTGCATCAACTCTTCGCTAAGGTCTCCAAACCCGATCTATTCTTGTTCAATGTCCTTATAAGAGGCTTCTCCGACAATAGTTTGCCTAAATCTTCGATCTCTCTCTATACCCATTTGAGAAAAAGGACTAATCTTAGGCCAGACAATTTCACTTATGCATTTGCGATTTCAGCTGCTTCGAGGTTTGAGGATGAGAGGGTCGGCGTCTTGTTGCACGCACACTCCATTGTTGATGGGGTGGCGTCAAATTTGTTTGTTGGGTCTGCAATTGTTGATTTGTACTTTAAATTCACGCGCGCCGAGTTGGCGTGGAAGGTGTTTGATGTAATGCCTGAGAGGGATACGGTTCTCTGGAACACGATGATATCTGGGTTTTCCAGGAATTCTTGTTTTGAGGACTCCATACGTGTTTTTGTGGATATGCTCGATGTTGGGTTGCCATTTGATTCTACAACTTTGGCTGCGGTGCTTACAGCAGTGGCGGAGTTGCAGGAATATAGATTAGGGATGGGTATCCAATGTTTGGCTTTAAAAAAAGGACTCCATTCTGATGTTTATGTGCTTACAGGATTGATATCATTATATTCAAAATGCGGGAAGAGTGACAAAGGAAGGTTGTTGTTTGATCAGATTGATCAGCCAGATATAATATCTTATAACGCAATGATTTCTGGTTATACATTCAATCATGAAACTGGGTCAGCAGTTACACTCTTCAGGGAATTGCTTGCCTCCGGACGGGGTATTAATTCAAGCACTTTGGTGGGCTTGATTCCAGTTTTTTCGCCATTCGGCCATCTGCAACTTACTCGCTTGATTCAAAATTTAAGCATGAAAATTGGTATTATTTTGCAACCTTCGGTTTCAACTGCTCTAACTACTGTTTACTGTCGACTAAATGAAGTACAATTTGCAAGGCAGTTGTTTGATGAATCTCCAGAGAAAAGTTTGGCTTCTTGGAATGCCATGATATCAGGGTATACTCAAAATGGGTTGACAGAGAGTGCAATTTCTCTTTTCCAAGAAATGATGCCTCAACTCAGCCCAAATCCTGTTACTGTAACCAGTATACTTTCAGCTTGTGCGCAACTTGGAGCTCTAAGTATTGGAAAATGGGTTCATGGCTTGATTAAGAGTGAAAGACTTGAATCAAACATATATGTCTCTACTGCATTAGTTGATATGTATGCAAAATGTGGTAGCATCGTGGAGGCTCGTCAATTATTTGACTTGATGGCAGAAAAGAATGCAGTAACCTGGAATGCCATGATAACTGGTTATGGTCTCCATGGACATGGCAAGGAAGCACTAAACCTCTTTAATGAGATGTTGCAATCTGGGATTCCACCGACAGGGGTTACTTTCCTTTCTATCTTGTATGCTTGCAGTCACTCCGGCTTGGTGAGAGAGGGAAATGAAATTTTCCACTCTATGGTTAACAATTATGGTTTTCAGCCCATGAGCGAGCACTACGCTTGCATGGTTGACATACTTGGGAGAGCTGGACAGCTAACAAATGCCTTGGAGTTTATTGAAAGAATGCCACTCGAGCCTGGCCCAGCTGTTTGGGGTGCACTGCTTGGCGCTTGCATGATTCACAAGAATACGGACATAGCCCATGTTGCTTCCAAAAGACTTTTCCAATTGGACCCAGAAAACGTGGGGTACTATGTCCTACTTTCAAATATATATTCTACTGACAGGAACTTCCCCAAAGCTGCTTCAGTACGACAAGTAGTTAAGAAGAGAAAACTAGCAAAGACGCCTGGTTGCACTCTAATTGAGATTGGCAATCAACAATATGTGTTCACATCTGGTGATCAGTCCCATCCTCAGGCCGCAGCCATTTTTGCCATGCTGGAGAAGTTAACAGGGAAAATGAGAGAGGCTGGATATCAGGCAGAAACTGTTGCTACTGCTTTGCATGATGTAGAGGATGAAGAGAAGGAGTTAATGGTGAATGTACACAGTGAAAAATTAGCAATTGCTTTTGGGCTTATTTCAACTGAGCCTGGAACTGAAATTAGGATTATCAAAAACCTCCGAGTTTGTCTTGACTGTCATACTGCAACTAAATTTATATCAAAGATCACTGAGAGAGTGATTGTGGTTAGGGATGCTAATAGATTCCATCATTTCAAAAATGGTATTTGCTCATGTGGAGACTACTGGTGA

Coding sequence (CDS)

ATGGTAACACAGATGATATGCACAAACACTACAACCTCTGCCATTCGTGGACAAAAATTCCTCCTCACGCTTCTTAAAAAGGCCACTACACTTCCCCAACTCCTTCAAATCCAAGCACAGTTAATCCTCCACGGTATTCACTCTGATATCTCTTCGATTACCAAGCTTACCCACAAGTTCTTCGACCTCGGGGCCATTCGCCATGTGCATCAACTCTTCGCTAAGGTCTCCAAACCCGATCTATTCTTGTTCAATGTCCTTATAAGAGGCTTCTCCGACAATAGTTTGCCTAAATCTTCGATCTCTCTCTATACCCATTTGAGAAAAAGGACTAATCTTAGGCCAGACAATTTCACTTATGCATTTGCGATTTCAGCTGCTTCGAGGTTTGAGGATGAGAGGGTCGGCGTCTTGTTGCACGCACACTCCATTGTTGATGGGGTGGCGTCAAATTTGTTTGTTGGGTCTGCAATTGTTGATTTGTACTTTAAATTCACGCGCGCCGAGTTGGCGTGGAAGGTGTTTGATGTAATGCCTGAGAGGGATACGGTTCTCTGGAACACGATGATATCTGGGTTTTCCAGGAATTCTTGTTTTGAGGACTCCATACGTGTTTTTGTGGATATGCTCGATGTTGGGTTGCCATTTGATTCTACAACTTTGGCTGCGGTGCTTACAGCAGTGGCGGAGTTGCAGGAATATAGATTAGGGATGGGTATCCAATGTTTGGCTTTAAAAAAAGGACTCCATTCTGATGTTTATGTGCTTACAGGATTGATATCATTATATTCAAAATGCGGGAAGAGTGACAAAGGAAGGTTGTTGTTTGATCAGATTGATCAGCCAGATATAATATCTTATAACGCAATGATTTCTGGTTATACATTCAATCATGAAACTGGGTCAGCAGTTACACTCTTCAGGGAATTGCTTGCCTCCGGACGGGGTATTAATTCAAGCACTTTGGTGGGCTTGATTCCAGTTTTTTCGCCATTCGGCCATCTGCAACTTACTCGCTTGATTCAAAATTTAAGCATGAAAATTGGTATTATTTTGCAACCTTCGGTTTCAACTGCTCTAACTACTGTTTACTGTCGACTAAATGAAGTACAATTTGCAAGGCAGTTGTTTGATGAATCTCCAGAGAAAAGTTTGGCTTCTTGGAATGCCATGATATCAGGGTATACTCAAAATGGGTTGACAGAGAGTGCAATTTCTCTTTTCCAAGAAATGATGCCTCAACTCAGCCCAAATCCTGTTACTGTAACCAGTATACTTTCAGCTTGTGCGCAACTTGGAGCTCTAAGTATTGGAAAATGGGTTCATGGCTTGATTAAGAGTGAAAGACTTGAATCAAACATATATGTCTCTACTGCATTAGTTGATATGTATGCAAAATGTGGTAGCATCGTGGAGGCTCGTCAATTATTTGACTTGATGGCAGAAAAGAATGCAGTAACCTGGAATGCCATGATAACTGGTTATGGTCTCCATGGACATGGCAAGGAAGCACTAAACCTCTTTAATGAGATGTTGCAATCTGGGATTCCACCGACAGGGGTTACTTTCCTTTCTATCTTGTATGCTTGCAGTCACTCCGGCTTGGTGAGAGAGGGAAATGAAATTTTCCACTCTATGGTTAACAATTATGGTTTTCAGCCCATGAGCGAGCACTACGCTTGCATGGTTGACATACTTGGGAGAGCTGGACAGCTAACAAATGCCTTGGAGTTTATTGAAAGAATGCCACTCGAGCCTGGCCCAGCTGTTTGGGGTGCACTGCTTGGCGCTTGCATGATTCACAAGAATACGGACATAGCCCATGTTGCTTCCAAAAGACTTTTCCAATTGGACCCAGAAAACGTGGGGTACTATGTCCTACTTTCAAATATATATTCTACTGACAGGAACTTCCCCAAAGCTGCTTCAGTACGACAAGTAGTTAAGAAGAGAAAACTAGCAAAGACGCCTGGTTGCACTCTAATTGAGATTGGCAATCAACAATATGTGTTCACATCTGGTGATCAGTCCCATCCTCAGGCCGCAGCCATTTTTGCCATGCTGGAGAAGTTAACAGGGAAAATGAGAGAGGCTGGATATCAGGCAGAAACTGTTGCTACTGCTTTGCATGATGTAGAGGATGAAGAGAAGGAGTTAATGGTGAATGTACACAGTGAAAAATTAGCAATTGCTTTTGGGCTTATTTCAACTGAGCCTGGAACTGAAATTAGGATTATCAAAAACCTCCGAGTTTGTCTTGACTGTCATACTGCAACTAAATTTATATCAAAGATCACTGAGAGAGTGATTGTGGTTAGGGATGCTAATAGATTCCATCATTTCAAAAATGGTATTTGCTCATGTGGAGACTACTGGTGA

Protein sequence

MVTQMICTNTTTSAIRGQKFLLTLLKKATTLPQLLQIQAQLILHGIHSDISSITKLTHKFFDLGAIRHVHQLFAKVSKPDLFLFNVLIRGFSDNSLPKSSISLYTHLRKRTNLRPDNFTYAFAISAASRFEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELAWKVFDVMPERDTVLWNTMISGFSRNSCFEDSIRVFVDMLDVGLPFDSTTLAAVLTAVAELQEYRLGMGIQCLALKKGLHSDVYVLTGLISLYSKCGKSDKGRLLFDQIDQPDIISYNAMISGYTFNHETGSAVTLFRELLASGRGINSSTLVGLIPVFSPFGHLQLTRLIQNLSMKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTESAISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNIYVSTALVDMYAKCGSIVEARQLFDLMAEKNAVTWNAMITGYGLHGHGKEALNLFNEMLQSGIPPTGVTFLSILYACSHSGLVREGNEIFHSMVNNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTDIAHVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIGNQQYVFTSGDQSHPQAAAIFAMLEKLTGKMREAGYQAETVATALHDVEDEEKELMVNVHSEKLAIAFGLISTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW
Homology
[Close]
BLAST of Clc11G12530 vs. NCBI nr
Match: XP_038889951.1 (pentatricopeptide repeat-containing protein At4g30700-like isoform X1 [Benincasa hispida] >XP_038889952.1 pentatricopeptide repeat-containing protein At4g30700-like isoform X1 [Benincasa hispida] >XP_038889953.1 pentatricopeptide repeat-containing protein At4g30700-like isoform X1 [Benincasa hispida] >XP_038889954.1 pentatricopeptide repeat-containing protein At4g30700-like isoform X1 [Benincasa hispida] >XP_038889955.1 pentatricopeptide repeat-containing protein At4g30700-like isoform X1 [Benincasa hispida] >XP_038889956.1 pentatricopeptide repeat-containing protein At4g30700-like isoform X1 [Benincasa hispida] >XP_038889957.1 pentatricopeptide repeat-containing protein At4g30700-like isoform X1 [Benincasa hispida])

HSP 1 Score: 1493.8 bits (3866), Expect = 0.0e+00
Identity = 752/792 (94.95%), Postives = 768/792 (96.97%), Query Frame = 0 

Query: 1   MVTQMICTNTTTSAIRGQKFLLTLLKKATTLPQLLQIQAQLILHGIHSDISSITKLTHKF 60
           MV QMICTNTTTSAI G+KF LTLL KATTLPQLLQI AQLILHGIH+D+SSITKLTHKF
Sbjct: 1   MVMQMICTNTTTSAIHGRKFFLTLLNKATTLPQLLQIHAQLILHGIHNDLSSITKLTHKF 60

Query: 61  FDLGAIRHVHQLFAKVSKPDLFLFNVLIRGFSDNSLPKSSISLYTHLRKRTNLRPDNFTY 120
           FDLGA+ HV QLFAKVSKPDLFLFNVLIRGFSDNSLPKSSI LYTHLRK TNLRPDNFT+
Sbjct: 61  FDLGAVYHVRQLFAKVSKPDLFLFNVLIRGFSDNSLPKSSIFLYTHLRKGTNLRPDNFTF 120

Query: 121 AFAISAASRFEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELAWKVFDVMPE 180
           AFAISAASRFEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELA KVFDVMPE
Sbjct: 121 AFAISAASRFEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPE 180

Query: 181 RDTVLWNTMISGFSRNSCFEDSIRVFVDMLDVGLPFDSTTLAAVLTAVAELQEYRLGMGI 240
           RDTVLWNTMISGFSRNS FEDSIRVFVDML+ GL FDSTTLAAVLTAVAELQEYRLGMGI
Sbjct: 181 RDTVLWNTMISGFSRNSYFEDSIRVFVDMLNAGLSFDSTTLAAVLTAVAELQEYRLGMGI 240

Query: 241 QCLALKKGLHSDVYVLTGLISLYSKCGKSDKGRLLFDQIDQPDIISYNAMISGYTFNHET 300
           QCLA KKGLHSDVYVLTGLISLYSKCGKSDKGRLLFDQIDQPD+ISYNAMISGYTFNHET
Sbjct: 241 QCLASKKGLHSDVYVLTGLISLYSKCGKSDKGRLLFDQIDQPDLISYNAMISGYTFNHET 300

Query: 301 GSAVTLFRELLASGRGINSSTLVGLIPVFSPFGHLQLTRLIQNLSMKIGIILQPSVSTAL 360
            SAVTLF+ELLASG+G+NSSTLVGL+PVFSPF HLQLT LIQNLSMKIGII QPSVSTAL
Sbjct: 301 ESAVTLFKELLASGQGVNSSTLVGLVPVFSPFNHLQLTCLIQNLSMKIGIISQPSVSTAL 360

Query: 361 TTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTESAISLFQEMMPQLSPNPV 420
           TTVYCRLNEVQFAR+LFDESPEKSLASWNAMISGYTQNGLTE AISLFQEM+PQLSPNPV
Sbjct: 361 TTVYCRLNEVQFARKLFDESPEKSLASWNAMISGYTQNGLTERAISLFQEMVPQLSPNPV 420

Query: 421 TVTSILSACAQLGALSIGKWVHGLIKSERLESNIYVSTALVDMYAKCGSIVEARQLFDLM 480
           TVTSILSACAQLGALSIGKWVHGLIKSERLESN+YVSTALVDMYAKCGSIVEARQLFDLM
Sbjct: 421 TVTSILSACAQLGALSIGKWVHGLIKSERLESNLYVSTALVDMYAKCGSIVEARQLFDLM 480

Query: 481 AEKNAVTWNAMITGYGLHGHGKEALNLFNEMLQSGIPPTGVTFLSILYACSHSGLVREGN 540
           AEKN VTWNAMITGYGLHGHGKEALNLFNEML+SGIP T VTFLSILYACSHSGLVREGN
Sbjct: 481 AEKNVVTWNAMITGYGLHGHGKEALNLFNEMLRSGIPLTRVTFLSILYACSHSGLVREGN 540

Query: 541 EIFHSMVNNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMI 600
           EIFHSMVNNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMI
Sbjct: 541 EIFHSMVNNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMI 600

Query: 601 HKNTDIAHVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCT 660
           HKNT+IAHVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCT
Sbjct: 601 HKNTEIAHVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCT 660

Query: 661 LIEIGNQQYVFTSGDQSHPQAAAIFAMLEKLTGKMREAGYQAETVATALHDVEDEEKELM 720
           LIEIGNQQYVFTSGDQSHPQA AIFAMLEKLTGKMREAGYQAETV TALHDVEDEEKELM
Sbjct: 661 LIEIGNQQYVFTSGDQSHPQATAIFAMLEKLTGKMREAGYQAETVTTALHDVEDEEKELM 720

Query: 721 VNVHSEKLAIAFGLISTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHH 780
           VNVHSEKLAIAFGLISTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHH
Sbjct: 721 VNVHSEKLAIAFGLISTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHH 780

Query: 781 FKNGICSCGDYW 793
           FKNGICSCGDYW
Sbjct: 781 FKNGICSCGDYW 792

[Close]
BLAST of Clc11G12530 vs. NCBI nr
Match: XP_038889958.1 (pentatricopeptide repeat-containing protein At4g30700-like isoform X2 [Benincasa hispida] >XP_038889959.1 pentatricopeptide repeat-containing protein At4g30700-like isoform X2 [Benincasa hispida])

HSP 1 Score: 1489.6 bits (3855), Expect = 0.0e+00
Identity = 749/788 (95.05%), Postives = 765/788 (97.08%), Query Frame = 0 

Query: 5   MICTNTTTSAIRGQKFLLTLLKKATTLPQLLQIQAQLILHGIHSDISSITKLTHKFFDLG 64
           MICTNTTTSAI G+KF LTLL KATTLPQLLQI AQLILHGIH+D+SSITKLTHKFFDLG
Sbjct: 1   MICTNTTTSAIHGRKFFLTLLNKATTLPQLLQIHAQLILHGIHNDLSSITKLTHKFFDLG 60

Query: 65  AIRHVHQLFAKVSKPDLFLFNVLIRGFSDNSLPKSSISLYTHLRKRTNLRPDNFTYAFAI 124
           A+ HV QLFAKVSKPDLFLFNVLIRGFSDNSLPKSSI LYTHLRK TNLRPDNFT+AFAI
Sbjct: 61  AVYHVRQLFAKVSKPDLFLFNVLIRGFSDNSLPKSSIFLYTHLRKGTNLRPDNFTFAFAI 120

Query: 125 SAASRFEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELAWKVFDVMPERDTV 184
           SAASRFEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELA KVFDVMPERDTV
Sbjct: 121 SAASRFEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTV 180

Query: 185 LWNTMISGFSRNSCFEDSIRVFVDMLDVGLPFDSTTLAAVLTAVAELQEYRLGMGIQCLA 244
           LWNTMISGFSRNS FEDSIRVFVDML+ GL FDSTTLAAVLTAVAELQEYRLGMGIQCLA
Sbjct: 181 LWNTMISGFSRNSYFEDSIRVFVDMLNAGLSFDSTTLAAVLTAVAELQEYRLGMGIQCLA 240

Query: 245 LKKGLHSDVYVLTGLISLYSKCGKSDKGRLLFDQIDQPDIISYNAMISGYTFNHETGSAV 304
            KKGLHSDVYVLTGLISLYSKCGKSDKGRLLFDQIDQPD+ISYNAMISGYTFNHET SAV
Sbjct: 241 SKKGLHSDVYVLTGLISLYSKCGKSDKGRLLFDQIDQPDLISYNAMISGYTFNHETESAV 300

Query: 305 TLFRELLASGRGINSSTLVGLIPVFSPFGHLQLTRLIQNLSMKIGIILQPSVSTALTTVY 364
           TLF+ELLASG+G+NSSTLVGL+PVFSPF HLQLT LIQNLSMKIGII QPSVSTALTTVY
Sbjct: 301 TLFKELLASGQGVNSSTLVGLVPVFSPFNHLQLTCLIQNLSMKIGIISQPSVSTALTTVY 360

Query: 365 CRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTESAISLFQEMMPQLSPNPVTVTS 424
           CRLNEVQFAR+LFDESPEKSLASWNAMISGYTQNGLTE AISLFQEM+PQLSPNPVTVTS
Sbjct: 361 CRLNEVQFARKLFDESPEKSLASWNAMISGYTQNGLTERAISLFQEMVPQLSPNPVTVTS 420

Query: 425 ILSACAQLGALSIGKWVHGLIKSERLESNIYVSTALVDMYAKCGSIVEARQLFDLMAEKN 484
           ILSACAQLGALSIGKWVHGLIKSERLESN+YVSTALVDMYAKCGSIVEARQLFDLMAEKN
Sbjct: 421 ILSACAQLGALSIGKWVHGLIKSERLESNLYVSTALVDMYAKCGSIVEARQLFDLMAEKN 480

Query: 485 AVTWNAMITGYGLHGHGKEALNLFNEMLQSGIPPTGVTFLSILYACSHSGLVREGNEIFH 544
            VTWNAMITGYGLHGHGKEALNLFNEML+SGIP T VTFLSILYACSHSGLVREGNEIFH
Sbjct: 481 VVTWNAMITGYGLHGHGKEALNLFNEMLRSGIPLTRVTFLSILYACSHSGLVREGNEIFH 540

Query: 545 SMVNNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT 604
           SMVNNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT
Sbjct: 541 SMVNNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT 600

Query: 605 DIAHVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEI 664
           +IAHVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEI
Sbjct: 601 EIAHVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEI 660

Query: 665 GNQQYVFTSGDQSHPQAAAIFAMLEKLTGKMREAGYQAETVATALHDVEDEEKELMVNVH 724
           GNQQYVFTSGDQSHPQA AIFAMLEKLTGKMREAGYQAETV TALHDVEDEEKELMVNVH
Sbjct: 661 GNQQYVFTSGDQSHPQATAIFAMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVH 720

Query: 725 SEKLAIAFGLISTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNG 784
           SEKLAIAFGLISTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNG
Sbjct: 721 SEKLAIAFGLISTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNG 780

Query: 785 ICSCGDYW 793
           ICSCGDYW
Sbjct: 781 ICSCGDYW 788

[Close]
BLAST of Clc11G12530 vs. NCBI nr
Match: XP_016902152.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g30700 [Cucumis melo] >KAA0047626.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK08282.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1476.8 bits (3822), Expect = 0.0e+00
Identity = 742/788 (94.16%), Postives = 759/788 (96.32%), Query Frame = 0 

Query: 5   MICTNTTTSAIRGQKFLLTLLKKATTLPQLLQIQAQLILHGIHSDISSITKLTHKFFDLG 64
           MICTNTTTSAIRGQKF LTLL  ATTLPQLLQIQAQLILHGI  D+SSITKLTHKFFDLG
Sbjct: 1   MICTNTTTSAIRGQKFFLTLLNNATTLPQLLQIQAQLILHGIQYDLSSITKLTHKFFDLG 60

Query: 65  AIRHVHQLFAKVSKPDLFLFNVLIRGFSDNSLPKSSISLYTHLRKRTNLRPDNFTYAFAI 124
           A+ HV QLF KVSKPDLFLFNVLIRGFSDN LPKSSI LYTHLRKRTNLRPDNFTYAFAI
Sbjct: 61  AVVHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKRTNLRPDNFTYAFAI 120

Query: 125 SAASRFEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELAWKVFDVMPERDTV 184
           SAASR EDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELA KVFDVMPERDTV
Sbjct: 121 SAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTV 180

Query: 185 LWNTMISGFSRNSCFEDSIRVFVDMLDVGLPFDSTTLAAVLTAVAELQEYRLGMGIQCLA 244
           LWNTMISGFSRNS FEDSIRVFVDMLDVGL FDSTTLA VLTAVAELQEYRLGMGIQCLA
Sbjct: 181 LWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLA 240

Query: 245 LKKGLHSDVYVLTGLISLYSKCGKSDKGRLLFDQIDQPDIISYNAMISGYTFNHETGSAV 304
            KKGLHSDVYVLTGLISLYSKCGKS KGR+LFDQIDQPD+ISYNAMISGYTFNHET SAV
Sbjct: 241 SKKGLHSDVYVLTGLISLYSKCGKSHKGRILFDQIDQPDLISYNAMISGYTFNHETESAV 300

Query: 305 TLFRELLASGRGINSSTLVGLIPVFSPFGHLQLTRLIQNLSMKIGIILQPSVSTALTTVY 364
           TLFRELLASG+G+NSSTLVGLIPV+SPF HLQLT LIQNLS+K+GIILQPSVSTALTTVY
Sbjct: 301 TLFRELLASGQGVNSSTLVGLIPVYSPFNHLQLTLLIQNLSLKLGIILQPSVSTALTTVY 360

Query: 365 CRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTESAISLFQEMMPQLSPNPVTVTS 424
           CRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLT+ AISLFQEMMPQLSPNPVTVTS
Sbjct: 361 CRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTS 420

Query: 425 ILSACAQLGALSIGKWVHGLIKSERLESNIYVSTALVDMYAKCGSIVEARQLFDLMAEKN 484
           ILSACAQLGALSIGKWVHGLIKSERLESN+YVSTALVDMYAKCGSIVEARQLFDLM +KN
Sbjct: 421 ILSACAQLGALSIGKWVHGLIKSERLESNLYVSTALVDMYAKCGSIVEARQLFDLMVDKN 480

Query: 485 AVTWNAMITGYGLHGHGKEALNLFNEMLQSGIPPTGVTFLSILYACSHSGLVREGNEIFH 544
            VTWNAMITGYGLHGHGKEAL LF EMLQSGIPPTGVTFLSILYACSHSGLVREGNEIFH
Sbjct: 481 VVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVREGNEIFH 540

Query: 545 SMVNNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT 604
           SM N+YGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT
Sbjct: 541 SMANDYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT 600

Query: 605 DIAHVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEI 664
           +IA+VASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEI
Sbjct: 601 EIANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEI 660

Query: 665 GNQQYVFTSGDQSHPQAAAIFAMLEKLTGKMREAGYQAETVATALHDVEDEEKELMVNVH 724
           G+QQYVFTSGD+SHPQA AIF MLEKLTGKMREAGYQAETV TALHDVEDEEKELMVNVH
Sbjct: 661 GDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVH 720

Query: 725 SEKLAIAFGLISTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNG 784
           SEKLAIAFGLISTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNG
Sbjct: 721 SEKLAIAFGLISTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNG 780

Query: 785 ICSCGDYW 793
           ICSCGDYW
Sbjct: 781 ICSCGDYW 788

[Close]
BLAST of Clc11G12530 vs. NCBI nr
Match: XP_004152852.1 (pentatricopeptide repeat-containing protein At4g30700 [Cucumis sativus])

HSP 1 Score: 1463.7 bits (3788), Expect = 0.0e+00
Identity = 735/788 (93.27%), Postives = 755/788 (95.81%), Query Frame = 0 

Query: 5   MICTNTTTSAIRGQKFLLTLLKKATTLPQLLQIQAQLILHGIHSDISSITKLTHKFFDLG 64
           MICTNT TSAIRGQ+F LTLL  ATTL QLLQIQAQLILHGIH D+SSITKLTHKFFDLG
Sbjct: 1   MICTNTATSAIRGQRFFLTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLG 60

Query: 65  AIRHVHQLFAKVSKPDLFLFNVLIRGFSDNSLPKSSISLYTHLRKRTNLRPDNFTYAFAI 124
           A+ HV QLF KVSKPDLFLFNVLIRGFSDN LPKSSI LYTHLRK+TNLRPDNFTYAFAI
Sbjct: 61  AVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAI 120

Query: 125 SAASRFEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELAWKVFDVMPERDTV 184
           SAASR EDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELA KVFDVMPERDTV
Sbjct: 121 SAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTV 180

Query: 185 LWNTMISGFSRNSCFEDSIRVFVDMLDVGLPFDSTTLAAVLTAVAELQEYRLGMGIQCLA 244
           LWNTMISGFSRNS FEDSIRVFVDMLDVGL FDSTTLA VLTAVAELQEYRLGMGIQCLA
Sbjct: 181 LWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLA 240

Query: 245 LKKGLHSDVYVLTGLISLYSKCGKSDKGRLLFDQIDQPDIISYNAMISGYTFNHETGSAV 304
            KKGLHSDVYVLTGLISLYSKCGKS KGR+LFDQIDQPD+ISYNAMISGYTFNHET SAV
Sbjct: 241 SKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAV 300

Query: 305 TLFRELLASGRGINSSTLVGLIPVFSPFGHLQLTRLIQNLSMKIGIILQPSVSTALTTVY 364
           TLFRELLASG+ +NSSTLVGLIPV+ PF HLQL+RLIQNLS+KIGIILQPSVSTALTTVY
Sbjct: 301 TLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVY 360

Query: 365 CRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTESAISLFQEMMPQLSPNPVTVTS 424
           CRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLT+ AISLFQEMMPQLSPNPVTVTS
Sbjct: 361 CRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTS 420

Query: 425 ILSACAQLGALSIGKWVHGLIKSERLESNIYVSTALVDMYAKCGSIVEARQLFDLMAEKN 484
           ILSACAQLGALSIGKWVHGLIKSERLESN+YVSTALVDMYAKCGSIVEARQLFDLM +KN
Sbjct: 421 ILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKN 480

Query: 485 AVTWNAMITGYGLHGHGKEALNLFNEMLQSGIPPTGVTFLSILYACSHSGLVREGNEIFH 544
            VTWNAMITGYGLHGHGKEAL LF EMLQSGIPPTGVTFLSILYACSHSGLV EGNEIFH
Sbjct: 481 VVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFH 540

Query: 545 SMVNNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT 604
           SM NNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT
Sbjct: 541 SMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT 600

Query: 605 DIAHVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEI 664
           ++A+VASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEI
Sbjct: 601 EMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEI 660

Query: 665 GNQQYVFTSGDQSHPQAAAIFAMLEKLTGKMREAGYQAETVATALHDVEDEEKELMVNVH 724
            +QQYVFTSGD+SHPQA AIF MLEKLTGKMREAGYQAETV TALHDVEDEEKELMVNVH
Sbjct: 661 DDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVH 720

Query: 725 SEKLAIAFGLISTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNG 784
           SEKLAIAFGLIST+PGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNG
Sbjct: 721 SEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNG 780

Query: 785 ICSCGDYW 793
           ICSCGDYW
Sbjct: 781 ICSCGDYW 788

[Close]
BLAST of Clc11G12530 vs. NCBI nr
Match: XP_023521013.1 (pentatricopeptide repeat-containing protein At4g30700 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1455.7 bits (3767), Expect = 0.0e+00
Identity = 723/788 (91.75%), Postives = 760/788 (96.45%), Query Frame = 0 

Query: 5   MICTNTTTSAIRGQKFLLTLLKKATTLPQLLQIQAQLILHGIHSDISSITKLTHKFFDLG 64
           MICTNTT S IR +KF L LL KATTLPQLLQIQAQLILHGIH D+SSITKLTHKFFDLG
Sbjct: 1   MICTNTTISVIRDKKFFLALLNKATTLPQLLQIQAQLILHGIHYDLSSITKLTHKFFDLG 60

Query: 65  AIRHVHQLFAKVSKPDLFLFNVLIRGFSDNSLPKSSISLYTHLRKRTNLRPDNFTYAFAI 124
           A+RHV QLFA VS+PDLF+FNVLIRGFSDN+LPKSSIS+YTHLRK TNLRPDNFTYAFAI
Sbjct: 61  AVRHVRQLFANVSRPDLFMFNVLIRGFSDNNLPKSSISVYTHLRKWTNLRPDNFTYAFAI 120

Query: 125 SAASRFEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELAWKVFDVMPERDTV 184
           SAAS+FEDER+GVL+HAHSIVDGVASNLFVGSAIVDLYF+FTRA+LA KVFD MPERDTV
Sbjct: 121 SAASKFEDERLGVLMHAHSIVDGVASNLFVGSAIVDLYFRFTRADLARKVFDAMPERDTV 180

Query: 185 LWNTMISGFSRNSCFEDSIRVFVDMLDVGLPFDSTTLAAVLTAVAELQEYRLGMGIQCLA 244
           LWNTMISGFSRNS FEDSIRVFVDMLDVGLPFDSTTLAAVLTAVAELQEYRLGM IQCLA
Sbjct: 181 LWNTMISGFSRNSYFEDSIRVFVDMLDVGLPFDSTTLAAVLTAVAELQEYRLGMSIQCLA 240

Query: 245 LKKGLHSDVYVLTGLISLYSKCGKSDKGRLLFDQIDQPDIISYNAMISGYTFNHETGSAV 304
            KKGLHSDVYVLTGLISL+SKCG+SDK RLLFDQIDQPD+ISYNAMISGYTFNHETGSAV
Sbjct: 241 SKKGLHSDVYVLTGLISLFSKCGESDKARLLFDQIDQPDLISYNAMISGYTFNHETGSAV 300

Query: 305 TLFRELLASGRGINSSTLVGLIPVFSPFGHLQLTRLIQNLSMKIGIILQPSVSTALTTVY 364
           TLFRELLASG+G++SSTLVGLIPVFSPF HLQLTR IQ LS+KIGII +PSVSTALTTVY
Sbjct: 301 TLFRELLASGQGVSSSTLVGLIPVFSPFSHLQLTRSIQTLSIKIGIISKPSVSTALTTVY 360

Query: 365 CRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTESAISLFQEMMPQLSPNPVTVTS 424
           CRLNE+Q+ARQLFDESPEKSLASWNAMISGYTQNGLTESAISLFQEMMPQLSPNPVTVTS
Sbjct: 361 CRLNEIQYARQLFDESPEKSLASWNAMISGYTQNGLTESAISLFQEMMPQLSPNPVTVTS 420

Query: 425 ILSACAQLGALSIGKWVHGLIKSERLESNIYVSTALVDMYAKCGSIVEARQLFDLMAEKN 484
           ILSACAQLGALS+GKWVHGLIKSE+LESNIYV+TALVDMYAKCGS+VEARQLFDL AEKN
Sbjct: 421 ILSACAQLGALSLGKWVHGLIKSEKLESNIYVTTALVDMYAKCGSVVEARQLFDLTAEKN 480

Query: 485 AVTWNAMITGYGLHGHGKEALNLFNEMLQSGIPPTGVTFLSILYACSHSGLVREGNEIFH 544
           AVTWNAMITGYGLHG+G EALNLFN+MLQSGIPPTGVTFLSILYACSHSGLVREGNEIFH
Sbjct: 481 AVTWNAMITGYGLHGYGNEALNLFNKMLQSGIPPTGVTFLSILYACSHSGLVREGNEIFH 540

Query: 545 SMVNNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT 604
           SMVNN+GFQPMSEHYACMVDI GRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT
Sbjct: 541 SMVNNFGFQPMSEHYACMVDIFGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT 600

Query: 605 DIAHVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEI 664
           DIAHVAS+RLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKR LAKTPGCTLIEI
Sbjct: 601 DIAHVASERLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRNLAKTPGCTLIEI 660

Query: 665 GNQQYVFTSGDQSHPQAAAIFAMLEKLTGKMREAGYQAETVATALHDVEDEEKELMVNVH 724
            +QQ+VFTSGD+SHP+A AI+AMLEKL GKMREAGYQAETV TALHDVEDEEKELMVNVH
Sbjct: 661 DDQQHVFTSGDRSHPRATAIYAMLEKLIGKMREAGYQAETVTTALHDVEDEEKELMVNVH 720

Query: 725 SEKLAIAFGLISTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNG 784
           SEKLAIAFGLISTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFK+G
Sbjct: 721 SEKLAIAFGLISTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDG 780

Query: 785 ICSCGDYW 793
           +CSCGDYW
Sbjct: 781 LCSCGDYW 788

[Close]
BLAST of Clc11G12530 vs. ExPASy Swiss-Prot
Match: Q9SUH6 (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1)

HSP 1 Score: 1016.9 bits (2628), Expect = 1.2e-295
Identity = 510/787 (64.80%), Postives = 615/787 (78.14%), Query Frame = 0 

Query: 8   TNTTTSAIRGQKFLLTLLKKATTLPQLLQIQAQLILHGIHSDISSITKLTHKFFDLGAIR 67
           T  TT+A+  +   L   K++T++  L Q  AQ+ILHG  +DIS +TKLT +  DLGAI 
Sbjct: 10  TAETTAALISKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIY 69

Query: 68  HVHQLFAKVSKPDLFLFNVLIRGFSDNSLPKSSISLYTHLRKRTNLRPDNFTYAFAISAA 127
           +   +F  V +PD+FLFNVL+RGFS N  P SS+S++ HLRK T+L+P++ TYAFAISAA
Sbjct: 70  YARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAA 129

Query: 128 SRFEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELAWKVFDVMPERDTVLWN 187
           S F D+R G ++H  ++VDG  S L +GS IV +YFKF R E A KVFD MPE+DT+LWN
Sbjct: 130 SGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWN 189

Query: 188 TMISGFSRNSCFEDSIRVFVDMLDVGLP-FDSTTLAAVLTAVAELQEYRLGMGIQCLALK 247
           TMISG+ +N  + +SI+VF D+++      D+TTL  +L AVAELQE RLGM I  LA K
Sbjct: 190 TMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATK 249

Query: 248 KGLHSDVYVLTGLISLYSKCGKSDKGRLLFDQIDQPDIISYNAMISGYTFNHETGSAVTL 307
            G +S  YVLTG ISLYSKCGK   G  LF +  +PDI++YNAMI GYT N ET  +++L
Sbjct: 250 TGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSL 309

Query: 308 FRELLASGRGINSSTLVGLIPVFSPFGHLQLTRLIQNLSMKIGIILQPSVSTALTTVYCR 367
           F+EL+ SG  + SSTLV L+PV    GHL L   I    +K   +   SVSTALTTVY +
Sbjct: 310 FKELMLSGARLRSSTLVSLVPV---SGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSK 369

Query: 368 LNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTESAISLFQEMM-PQLSPNPVTVTSI 427
           LNE++ AR+LFDESPEKSL SWNAMISGYTQNGLTE AISLF+EM   + SPNPVT+T I
Sbjct: 370 LNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCI 429

Query: 428 LSACAQLGALSIGKWVHGLIKSERLESNIYVSTALVDMYAKCGSIVEARQLFDLMAEKNA 487
           LSACAQLGALS+GKWVH L++S   ES+IYVSTAL+ MYAKCGSI EAR+LFDLM +KN 
Sbjct: 430 LSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNE 489

Query: 488 VTWNAMITGYGLHGHGKEALNLFNEMLQSGIPPTGVTFLSILYACSHSGLVREGNEIFHS 547
           VTWN MI+GYGLHG G+EALN+F EML SGI PT VTFL +LYACSH+GLV+EG+EIF+S
Sbjct: 490 VTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNS 549

Query: 548 MVNNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTD 607
           M++ YGF+P  +HYACMVDILGRAG L  AL+FIE M +EPG +VW  LLGAC IHK+T+
Sbjct: 550 MIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTN 609

Query: 608 IAHVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIG 667
           +A   S++LF+LDP+NVGY+VLLSNI+S DRN+P+AA+VRQ  KKRKLAK PG TLIEIG
Sbjct: 610 LARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIG 669

Query: 668 NQQYVFTSGDQSHPQAAAIFAMLEKLTGKMREAGYQAETVATALHDVEDEEKELMVNVHS 727
              +VFTSGDQSHPQ   I+  LEKL GKMREAGYQ ET   ALHDVE+EE+ELMV VHS
Sbjct: 670 ETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPET-ELALHDVEEEERELMVKVHS 729

Query: 728 EKLAIAFGLISTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGI 787
           E+LAIAFGLI+TEPGTEIRIIKNLRVCLDCHT TK ISKITERVIVVRDANRFHHFK+G+
Sbjct: 730 ERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGV 789

Query: 788 CSCGDYW 793
           CSCGDYW
Sbjct: 790 CSCGDYW 792

[Close]
BLAST of Clc11G12530 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 604.7 bits (1558), Expect = 1.4e-171
Identity = 306/770 (39.74%), Postives = 474/770 (61.56%), Query Frame = 0 

Query: 24  LLKKATTLPQLLQIQAQLILHGIHSDISSITKLTHKFFDLGAIRHVHQLFAKVSKPDLFL 83
           LL++ ++L +L QI   +  +G++ +    TKL   F   G++    ++F  +      L
Sbjct: 43  LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL 102

Query: 84  FNVLIRGFSDNSLPKSSISLYTHLRKRTNLRPDNFTYAFAISAASRFEDERVGVLLHAHS 143
           ++ +++GF+  S    ++  +  +R   ++ P  + + + +       + RVG  +H   
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMR-YDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 162

Query: 144 IVDGVASNLFVGSAIVDLYFKFTRAELAWKVFDVMPERDTVLWNTMISGFSRNSCFEDSI 203
           +  G + +LF  + + ++Y K  +   A KVFD MPERD V WNT+++G+S+N     ++
Sbjct: 163 VKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMAL 222

Query: 204 RVFVDMLDVGLPFDSTTLAAVLTAVAELQEYRLGMGIQCLALKKGLHSDVYVLTGLISLY 263
            +   M +  L     T+ +VL AV+ L+   +G  I   A++ G  S V + T L+ +Y
Sbjct: 223 EMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMY 282

Query: 264 SKCGKSDKGRLLFDQIDQPDIISYNAMISGYTFNHETGSAVTLFRELLASGRGINSSTLV 323
           +KCG  +  R LFD + + +++S+N+MI  Y  N     A+ +F+++L  G      +++
Sbjct: 283 AKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVM 342

Query: 324 GLIPVFSPFGHLQLTRLIQNLSMKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEK 383
           G +   +  G L+  R I  LS+++G+    SV  +L ++YC+  EV  A  +F +   +
Sbjct: 343 GALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSR 402

Query: 384 SLASWNAMISGYTQNGLTESAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVH 443
           +L SWNAMI G+ QNG    A++ F +M  + + P+  T  S+++A A+L      KW+H
Sbjct: 403 TLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIH 462

Query: 444 GLIKSERLESNIYVSTALVDMYAKCGSIVEARQLFDLMAEKNAVTWNAMITGYGLHGHGK 503
           G++    L+ N++V+TALVDMYAKCG+I+ AR +FD+M+E++  TWNAMI GYG HG GK
Sbjct: 463 GVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGK 522

Query: 504 EALNLFNEMLQSGIPPTGVTFLSILYACSHSGLVREGNEIFHSMVNNYGFQPMSEHYACM 563
            AL LF EM +  I P GVTFLS++ ACSHSGLV  G + F+ M  NY  +   +HY  M
Sbjct: 523 AALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAM 582

Query: 564 VDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTDIAHVASKRLFQLDPENV 623
           VD+LGRAG+L  A +FI +MP++P   V+GA+LGAC IHKN + A  A++RLF+L+P++ 
Sbjct: 583 VDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDG 642

Query: 624 GYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIGNQQYVFTSGDQSHPQAA 683
           GY+VLL+NIY     + K   VR  + ++ L KTPGC+++EI N+ + F SG  +HP + 
Sbjct: 643 GYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSK 702

Query: 684 AIFAMLEKLTGKMREAGYQAETVATALHDVEDEEKELMVNVHSEKLAIAFGLISTEPGTE 743
            I+A LEKL   ++EAGY  +T    +  VE++ KE +++ HSEKLAI+FGL++T  GT 
Sbjct: 703 KIYAFLEKLICHIKEAGYVPDT--NLVLGVENDVKEQLLSTHSEKLAISFGLLNTTAGTT 762

Query: 744 IRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 793
           I + KNLRVC DCH ATK+IS +T R IVVRD  RFHHFKNG CSCGDYW
Sbjct: 763 IHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809

[Close]
BLAST of Clc11G12530 vs. ExPASy Swiss-Prot
Match: O81767 (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX=3702 GN=EMB2758 PE=3 SV=2)

HSP 1 Score: 552.7 bits (1423), Expect = 6.5e-156
Identity = 293/774 (37.86%), Postives = 454/774 (58.66%), Query Frame = 0 

Query: 23  TLLKKATTLPQLLQIQAQLILHGIHSDISSITKLTHKFFDLGAIRHVHQLFAKVSKPDLF 82
           TL +  T L     + A+L++     ++    KL + +  LG +      F  +   D++
Sbjct: 59  TLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVY 118

Query: 83  LFNVLIRGFSDNSLPKSSISLYTHLRKRTNLRPDNFTYAFAISAASRFEDERVGVLLHAH 142
            +N++I G+         I  ++     + L PD  T+   + A     D   G  +H  
Sbjct: 119 AWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCL 178

Query: 143 SIVDGVASNLFVGSAIVDLYFKFTRAELAWKVFDVMPERDTVLWNTMISGFSRNSCFEDS 202
           ++  G   +++V ++++ LY ++     A  +FD MP RD   WN MISG+ ++   +++
Sbjct: 179 ALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEA 238

Query: 203 IRVFVDMLDVGL-PFDSTTLAAVLTAVAELQEYRLGMGIQCLALKKGLHSDVYVLTGLIS 262
           +      L  GL   DS T+ ++L+A  E  ++  G+ I   ++K GL S+++V   LI 
Sbjct: 239 L-----TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLID 298

Query: 263 LYSKCGKSDKGRLLFDQIDQPDIISYNAMISGYTFNHETGSAVTLFRELLASGRGINSST 322
           LY++ G+    + +FD++   D+IS+N++I  Y  N +   A++LF+E+  S    +  T
Sbjct: 299 LYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLT 358

Query: 323 LVGLIPVFSPFGHLQLTRLIQNLSMKIGIILQP-SVSTALTTVYCRLNEVQFARQLFDES 382
           L+ L  + S  G ++  R +Q  +++ G  L+  ++  A+  +Y +L  V  AR +F+  
Sbjct: 359 LISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWL 418

Query: 383 PEKSLASWNAMISGYTQNGLTESAISLF--QEMMPQLSPNPVTVTSILSACAQLGALSIG 442
           P   + SWN +ISGY QNG    AI ++   E   +++ N  T  S+L AC+Q GAL  G
Sbjct: 419 PNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQG 478

Query: 443 KWVHGLIKSERLESNIYVSTALVDMYAKCGSIVEARQLFDLMAEKNAVTWNAMITGYGLH 502
             +HG +    L  +++V T+L DMY KCG + +A  LF  +   N+V WN +I  +G H
Sbjct: 479 MKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFH 538

Query: 503 GHGKEALNLFNEMLQSGIPPTGVTFLSILYACSHSGLVREGNEIFHSMVNNYGFQPMSEH 562
           GHG++A+ LF EML  G+ P  +TF+++L ACSHSGLV EG   F  M  +YG  P  +H
Sbjct: 539 GHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKH 598

Query: 563 YACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTDIAHVASKRLFQLD 622
           Y CMVD+ GRAGQL  AL+FI+ M L+P  ++WGALL AC +H N D+  +AS+ LF+++
Sbjct: 599 YGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVE 658

Query: 623 PENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIGNQQYVFTSGDQSH 682
           PE+VGY+VLLSN+Y++   +     +R +   + L KTPG + +E+ N+  VF +G+Q+H
Sbjct: 659 PEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTH 718

Query: 683 PQAAAIFAMLEKLTGKMREAGYQAETVATALHDVEDEEKELMVNVHSEKLAIAFGLISTE 742
           P    ++  L  L  K++  GY  +     L DVED+EKE ++  HSE+LAIAF LI+T 
Sbjct: 719 PMYEEMYRELTALQAKLKMIGYVPDH-RFVLQDVEDDEKEHILMSHSERLAIAFALIATP 778

Query: 743 PGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 793
             T IRI KNLRVC DCH+ TKFISKITER I+VRD+NRFHHFKNG+CSCGDYW
Sbjct: 779 AKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823

[Close]
BLAST of Clc11G12530 vs. ExPASy Swiss-Prot
Match: Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 525.0 bits (1351), Expect = 1.5e-147
Identity = 267/693 (38.53%), Postives = 425/693 (61.33%), Query Frame = 0 

Query: 103 LYTHLRKRTNLRPDNFTYAFAISAASRFEDERVGVLLHAHSIVDGVASNLFVGSAIVDLY 162
           LYT+    + +  D+F  +   SA  + + +++    HA  +V G+  + F+ + ++   
Sbjct: 12  LYTN----SGIHSDSFYASLIDSATHKAQLKQI----HARLLVLGLQFSGFLITKLIHAS 71

Query: 163 FKFTRAELAWKVFDVMPERDTVLWNTMISGFSRNSCFEDSIRVFVDMLDVGLPFDSTTLA 222
             F     A +VFD +P      WN +I G+SRN+ F+D++ ++ +M    +  DS T  
Sbjct: 72  SSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFP 131

Query: 223 AVLTAVAELQEYRLGMGIQCLALKKGLHSDVYVLTGLISLYSKCGKSDKGRLLFDQIDQP 282
            +L A + L   ++G  +     + G  +DV+V  GLI+LY+KC +    R +F+ +  P
Sbjct: 132 HLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLP 191

Query: 283 D--IISYNAMISGYTFNHETGSAVTLFRELLASGRGINSSTLVGLIPVFSPFGHLQLTRL 342
           +  I+S+ A++S Y  N E   A+ +F ++       +   LV ++  F+    L+  R 
Sbjct: 192 ERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRS 251

Query: 343 IQNLSMKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGL 402
           I    +K+G+ ++P +  +L T+Y +  +V  A+ LFD+    +L  WNAMISGY +NG 
Sbjct: 252 IHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGY 311

Query: 403 TESAISLFQEMM-PQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNIYVSTA 462
              AI +F EM+   + P+ +++TS +SACAQ+G+L   + ++  +       ++++S+A
Sbjct: 312 AREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSA 371

Query: 463 LVDMYAKCGSIVEARQLFDLMAEKNAVTWNAMITGYGLHGHGKEALNLFNEMLQSGIPPT 522
           L+DM+AKCGS+  AR +FD   +++ V W+AMI GYGLHG  +EA++L+  M + G+ P 
Sbjct: 372 LIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPN 431

Query: 523 GVTFLSILYACSHSGLVREGNEIFHSMVNNYGFQPMSEHYACMVDILGRAGQLTNALEFI 582
            VTFL +L AC+HSG+VREG   F+ M  ++   P  +HYAC++D+LGRAG L  A E I
Sbjct: 432 DVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVI 491

Query: 583 ERMPLEPGPAVWGALLGACMIHKNTDIAHVASKRLFQLDPENVGYYVLLSNIYSTDRNFP 642
           + MP++PG  VWGALL AC  H++ ++   A+++LF +DP N G+YV LSN+Y+  R + 
Sbjct: 492 KCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWD 551

Query: 643 KAASVRQVVKKRKLAKTPGCTLIEIGNQQYVFTSGDQSHPQAAAIFAMLEKLTGKMREAG 702
           + A VR  +K++ L K  GC+ +E+  +   F  GD+SHP+   I   +E +  +++E G
Sbjct: 552 RVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGG 611

Query: 703 YQAETVATALHDVEDEEKELMVNVHSEKLAIAFGLISTEPGTEIRIIKNLRVCLDCHTAT 762
           + A   A +LHD+ DEE E  +  HSE++AIA+GLIST  GT +RI KNLR C++CH AT
Sbjct: 612 FVANKDA-SLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAAT 671

Query: 763 KFISKITERVIVVRDANRFHHFKNGICSCGDYW 793
           K ISK+ +R IVVRD NRFHHFK+G+CSCGDYW
Sbjct: 672 KLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694

[Close]
BLAST of Clc11G12530 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 525.0 bits (1351), Expect = 1.5e-147
Identity = 279/751 (37.15%), Postives = 423/751 (56.32%), Query Frame = 0 

Query: 44  HGIHSDISSITKLTHKFFDLGAIRHVHQLFAKVSKPDLFLFNVLIRGFSDNSLPKSSISL 103
           +G   D +  +KL+  + + G ++   ++F +V       +N+L+   + +     SI L
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182

Query: 104 YTHLRKRTNLRPDNFTYAFAISAASRFEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYF 163
           +  +   + +  D++T++    + S       G  LH   +  G      VG+++V  Y 
Sbjct: 183 FKKMMS-SGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYL 242

Query: 164 KFTRAELAWKVFDVMPERDTVLWNTMISGFSRNSCFEDSIRVFVDMLDVGLPFDSTTLAA 223
           K  R + A KVFD M ERD + WN++I+G+  N   E  + VFV ML  G+  D  T+ +
Sbjct: 243 KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 302

Query: 224 VLTAVAELQEYRLGMGIQCLALKKGLHSDVYVLTGLISLYSKCGKSDKGRLLFDQIDQPD 283
           V    A+ +   LG  +  + +K     +      L+ +YSKCG  D  + +F ++    
Sbjct: 303 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 362

Query: 284 IISYNAMISGYTFNHETGSAVTLFRELLASGRGINSSTLVGLIPVFSPFGHLQLTRLIQN 343
           ++SY +MI+GY      G AV LF E+   G   +  T+  ++   + +  L   + +  
Sbjct: 363 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 422

Query: 344 LSMKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTES 403
              +  +     VS AL  +Y +   +Q A  +F E   K + SWN +I GY++N     
Sbjct: 423 WIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANE 482

Query: 404 AISLFQEMMPQ--LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNIYVSTALV 463
           A+SLF  ++ +   SP+  TV  +L ACA L A   G+ +HG I      S+ +V+ +LV
Sbjct: 483 ALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 542

Query: 464 DMYAKCGSIVEARQLFDLMAEKNAVTWNAMITGYGLHGHGKEALNLFNEMLQSGIPPTGV 523
           DMYAKCG+++ A  LFD +A K+ V+W  MI GYG+HG GKEA+ LFN+M Q+GI    +
Sbjct: 543 DMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEI 602

Query: 524 TFLSILYACSHSGLVREGNEIFHSMVNNYGFQPMSEHYACMVDILGRAGQLTNALEFIER 583
           +F+S+LYACSHSGLV EG   F+ M +    +P  EHYAC+VD+L R G L  A  FIE 
Sbjct: 603 SFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIEN 662

Query: 584 MPLEPGPAVWGALLGACMIHKNTDIAHVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKA 643
           MP+ P   +WGALL  C IH +  +A   ++++F+L+PEN GYYVL++NIY+    + + 
Sbjct: 663 MPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQV 722

Query: 644 ASVRQVVKKRKLAKTPGCTLIEIGNQQYVFTSGDQSHPQAAAIFAMLEKLTGKMREAGYQ 703
             +R+ + +R L K PGC+ IEI  +  +F +GD S+P+   I A L K+  +M E GY 
Sbjct: 723 KRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYS 782

Query: 704 AETVATALHDVEDEEKELMVNVHSEKLAIAFGLISTEPGTEIRIIKNLRVCLDCHTATKF 763
             T   AL D E+ EKE  +  HSEKLA+A G+IS+  G  IR+ KNLRVC DCH   KF
Sbjct: 783 PLT-KYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKF 842

Query: 764 ISKITERVIVVRDANRFHHFKNGICSCGDYW 793
           +SK+T R IV+RD+NRFH FK+G CSC  +W
Sbjct: 843 MSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871

[Close]
BLAST of Clc11G12530 vs. ExPASy TrEMBL
Match: A0A5A7U078 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G00560 PE=3 SV=1)

HSP 1 Score: 1476.8 bits (3822), Expect = 0.0e+00
Identity = 742/788 (94.16%), Postives = 759/788 (96.32%), Query Frame = 0 

Query: 5   MICTNTTTSAIRGQKFLLTLLKKATTLPQLLQIQAQLILHGIHSDISSITKLTHKFFDLG 64
           MICTNTTTSAIRGQKF LTLL  ATTLPQLLQIQAQLILHGI  D+SSITKLTHKFFDLG
Sbjct: 1   MICTNTTTSAIRGQKFFLTLLNNATTLPQLLQIQAQLILHGIQYDLSSITKLTHKFFDLG 60

Query: 65  AIRHVHQLFAKVSKPDLFLFNVLIRGFSDNSLPKSSISLYTHLRKRTNLRPDNFTYAFAI 124
           A+ HV QLF KVSKPDLFLFNVLIRGFSDN LPKSSI LYTHLRKRTNLRPDNFTYAFAI
Sbjct: 61  AVVHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKRTNLRPDNFTYAFAI 120

Query: 125 SAASRFEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELAWKVFDVMPERDTV 184
           SAASR EDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELA KVFDVMPERDTV
Sbjct: 121 SAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTV 180

Query: 185 LWNTMISGFSRNSCFEDSIRVFVDMLDVGLPFDSTTLAAVLTAVAELQEYRLGMGIQCLA 244
           LWNTMISGFSRNS FEDSIRVFVDMLDVGL FDSTTLA VLTAVAELQEYRLGMGIQCLA
Sbjct: 181 LWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLA 240

Query: 245 LKKGLHSDVYVLTGLISLYSKCGKSDKGRLLFDQIDQPDIISYNAMISGYTFNHETGSAV 304
            KKGLHSDVYVLTGLISLYSKCGKS KGR+LFDQIDQPD+ISYNAMISGYTFNHET SAV
Sbjct: 241 SKKGLHSDVYVLTGLISLYSKCGKSHKGRILFDQIDQPDLISYNAMISGYTFNHETESAV 300

Query: 305 TLFRELLASGRGINSSTLVGLIPVFSPFGHLQLTRLIQNLSMKIGIILQPSVSTALTTVY 364
           TLFRELLASG+G+NSSTLVGLIPV+SPF HLQLT LIQNLS+K+GIILQPSVSTALTTVY
Sbjct: 301 TLFRELLASGQGVNSSTLVGLIPVYSPFNHLQLTLLIQNLSLKLGIILQPSVSTALTTVY 360

Query: 365 CRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTESAISLFQEMMPQLSPNPVTVTS 424
           CRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLT+ AISLFQEMMPQLSPNPVTVTS
Sbjct: 361 CRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTS 420

Query: 425 ILSACAQLGALSIGKWVHGLIKSERLESNIYVSTALVDMYAKCGSIVEARQLFDLMAEKN 484
           ILSACAQLGALSIGKWVHGLIKSERLESN+YVSTALVDMYAKCGSIVEARQLFDLM +KN
Sbjct: 421 ILSACAQLGALSIGKWVHGLIKSERLESNLYVSTALVDMYAKCGSIVEARQLFDLMVDKN 480

Query: 485 AVTWNAMITGYGLHGHGKEALNLFNEMLQSGIPPTGVTFLSILYACSHSGLVREGNEIFH 544
            VTWNAMITGYGLHGHGKEAL LF EMLQSGIPPTGVTFLSILYACSHSGLVREGNEIFH
Sbjct: 481 VVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVREGNEIFH 540

Query: 545 SMVNNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT 604
           SM N+YGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT
Sbjct: 541 SMANDYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT 600

Query: 605 DIAHVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEI 664
           +IA+VASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEI
Sbjct: 601 EIANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEI 660

Query: 665 GNQQYVFTSGDQSHPQAAAIFAMLEKLTGKMREAGYQAETVATALHDVEDEEKELMVNVH 724
           G+QQYVFTSGD+SHPQA AIF MLEKLTGKMREAGYQAETV TALHDVEDEEKELMVNVH
Sbjct: 661 GDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVH 720

Query: 725 SEKLAIAFGLISTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNG 784
           SEKLAIAFGLISTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNG
Sbjct: 721 SEKLAIAFGLISTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNG 780

Query: 785 ICSCGDYW 793
           ICSCGDYW
Sbjct: 781 ICSCGDYW 788

[Close]
BLAST of Clc11G12530 vs. ExPASy TrEMBL
Match: A0A1S4E1Q1 (pentatricopeptide repeat-containing protein At4g30700 OS=Cucumis melo OX=3656 GN=LOC103492100 PE=3 SV=1)

HSP 1 Score: 1476.8 bits (3822), Expect = 0.0e+00
Identity = 742/788 (94.16%), Postives = 759/788 (96.32%), Query Frame = 0 

Query: 5   MICTNTTTSAIRGQKFLLTLLKKATTLPQLLQIQAQLILHGIHSDISSITKLTHKFFDLG 64
           MICTNTTTSAIRGQKF LTLL  ATTLPQLLQIQAQLILHGI  D+SSITKLTHKFFDLG
Sbjct: 1   MICTNTTTSAIRGQKFFLTLLNNATTLPQLLQIQAQLILHGIQYDLSSITKLTHKFFDLG 60

Query: 65  AIRHVHQLFAKVSKPDLFLFNVLIRGFSDNSLPKSSISLYTHLRKRTNLRPDNFTYAFAI 124
           A+ HV QLF KVSKPDLFLFNVLIRGFSDN LPKSSI LYTHLRKRTNLRPDNFTYAFAI
Sbjct: 61  AVVHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKRTNLRPDNFTYAFAI 120

Query: 125 SAASRFEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELAWKVFDVMPERDTV 184
           SAASR EDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELA KVFDVMPERDTV
Sbjct: 121 SAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTV 180

Query: 185 LWNTMISGFSRNSCFEDSIRVFVDMLDVGLPFDSTTLAAVLTAVAELQEYRLGMGIQCLA 244
           LWNTMISGFSRNS FEDSIRVFVDMLDVGL FDSTTLA VLTAVAELQEYRLGMGIQCLA
Sbjct: 181 LWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLA 240

Query: 245 LKKGLHSDVYVLTGLISLYSKCGKSDKGRLLFDQIDQPDIISYNAMISGYTFNHETGSAV 304
            KKGLHSDVYVLTGLISLYSKCGKS KGR+LFDQIDQPD+ISYNAMISGYTFNHET SAV
Sbjct: 241 SKKGLHSDVYVLTGLISLYSKCGKSHKGRILFDQIDQPDLISYNAMISGYTFNHETESAV 300

Query: 305 TLFRELLASGRGINSSTLVGLIPVFSPFGHLQLTRLIQNLSMKIGIILQPSVSTALTTVY 364
           TLFRELLASG+G+NSSTLVGLIPV+SPF HLQLT LIQNLS+K+GIILQPSVSTALTTVY
Sbjct: 301 TLFRELLASGQGVNSSTLVGLIPVYSPFNHLQLTLLIQNLSLKLGIILQPSVSTALTTVY 360

Query: 365 CRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTESAISLFQEMMPQLSPNPVTVTS 424
           CRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLT+ AISLFQEMMPQLSPNPVTVTS
Sbjct: 361 CRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTS 420

Query: 425 ILSACAQLGALSIGKWVHGLIKSERLESNIYVSTALVDMYAKCGSIVEARQLFDLMAEKN 484
           ILSACAQLGALSIGKWVHGLIKSERLESN+YVSTALVDMYAKCGSIVEARQLFDLM +KN
Sbjct: 421 ILSACAQLGALSIGKWVHGLIKSERLESNLYVSTALVDMYAKCGSIVEARQLFDLMVDKN 480

Query: 485 AVTWNAMITGYGLHGHGKEALNLFNEMLQSGIPPTGVTFLSILYACSHSGLVREGNEIFH 544
            VTWNAMITGYGLHGHGKEAL LF EMLQSGIPPTGVTFLSILYACSHSGLVREGNEIFH
Sbjct: 481 VVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVREGNEIFH 540

Query: 545 SMVNNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT 604
           SM N+YGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT
Sbjct: 541 SMANDYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT 600

Query: 605 DIAHVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEI 664
           +IA+VASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEI
Sbjct: 601 EIANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEI 660

Query: 665 GNQQYVFTSGDQSHPQAAAIFAMLEKLTGKMREAGYQAETVATALHDVEDEEKELMVNVH 724
           G+QQYVFTSGD+SHPQA AIF MLEKLTGKMREAGYQAETV TALHDVEDEEKELMVNVH
Sbjct: 661 GDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVH 720

Query: 725 SEKLAIAFGLISTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNG 784
           SEKLAIAFGLISTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNG
Sbjct: 721 SEKLAIAFGLISTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNG 780

Query: 785 ICSCGDYW 793
           ICSCGDYW
Sbjct: 781 ICSCGDYW 788

[Close]
BLAST of Clc11G12530 vs. ExPASy TrEMBL
Match: A0A6J1IEL0 (pentatricopeptide repeat-containing protein At4g30700 OS=Cucurbita maxima OX=3661 GN=LOC111471980 PE=3 SV=1)

HSP 1 Score: 1455.3 bits (3766), Expect = 0.0e+00
Identity = 723/788 (91.75%), Postives = 759/788 (96.32%), Query Frame = 0 

Query: 5   MICTNTTTSAIRGQKFLLTLLKKATTLPQLLQIQAQLILHGIHSDISSITKLTHKFFDLG 64
           MICTNTT S IR +KF L LL KATTLPQLLQIQAQLILHGIH D+SSITKLTHKFFDLG
Sbjct: 1   MICTNTTISVIRDKKFFLPLLNKATTLPQLLQIQAQLILHGIHYDLSSITKLTHKFFDLG 60

Query: 65  AIRHVHQLFAKVSKPDLFLFNVLIRGFSDNSLPKSSISLYTHLRKRTNLRPDNFTYAFAI 124
           A+RHV QLFA VS+PDLF+FNVLIRGFSDN+LPKSSIS+YTHLRK TNLRPDNFTYAFAI
Sbjct: 61  AVRHVRQLFANVSRPDLFMFNVLIRGFSDNNLPKSSISVYTHLRKWTNLRPDNFTYAFAI 120

Query: 125 SAASRFEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELAWKVFDVMPERDTV 184
           SAAS+FEDER+GVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRA++A KVFD MPERDTV
Sbjct: 121 SAASKFEDERLGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRADMARKVFDAMPERDTV 180

Query: 185 LWNTMISGFSRNSCFEDSIRVFVDMLDVGLPFDSTTLAAVLTAVAELQEYRLGMGIQCLA 244
           LWNTMISGFSRNS FEDSIRVFVDML VGLPFDSTTLAAVLTAVAELQEYRLGM IQCLA
Sbjct: 181 LWNTMISGFSRNSYFEDSIRVFVDMLHVGLPFDSTTLAAVLTAVAELQEYRLGMSIQCLA 240

Query: 245 LKKGLHSDVYVLTGLISLYSKCGKSDKGRLLFDQIDQPDIISYNAMISGYTFNHETGSAV 304
            KKGLHSDVYVLTGLISL+SKCG+SDK RLLFDQIDQPD+ISYNAMISGYTFNHETGSAV
Sbjct: 241 SKKGLHSDVYVLTGLISLFSKCGESDKARLLFDQIDQPDLISYNAMISGYTFNHETGSAV 300

Query: 305 TLFRELLASGRGINSSTLVGLIPVFSPFGHLQLTRLIQNLSMKIGIILQPSVSTALTTVY 364
           TLFRELLASG+G++SSTLVGLIPVFSPF HLQLTR IQ LS+KIGII +PSVSTALTTVY
Sbjct: 301 TLFRELLASGQGVSSSTLVGLIPVFSPFSHLQLTRSIQTLSIKIGIISKPSVSTALTTVY 360

Query: 365 CRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTESAISLFQEMMPQLSPNPVTVTS 424
           CRLNE+Q+ARQLFDESPEKSLASWNAMISGYTQNGLTESAISLFQEM+PQLSPNPVTVTS
Sbjct: 361 CRLNEIQYARQLFDESPEKSLASWNAMISGYTQNGLTESAISLFQEMLPQLSPNPVTVTS 420

Query: 425 ILSACAQLGALSIGKWVHGLIKSERLESNIYVSTALVDMYAKCGSIVEARQLFDLMAEKN 484
           ILSACAQLGALS+GKWVHGLIKSE+LESNIYV+TAL+DMYAKCGS+VEARQLFDLMAEKN
Sbjct: 421 ILSACAQLGALSLGKWVHGLIKSEKLESNIYVTTALIDMYAKCGSVVEARQLFDLMAEKN 480

Query: 485 AVTWNAMITGYGLHGHGKEALNLFNEMLQSGIPPTGVTFLSILYACSHSGLVREGNEIFH 544
           AVTWNAMITGYGLHG+G EALNLFN+MLQSGIPPTGVTFLSILYACSHSGLVREGNEIFH
Sbjct: 481 AVTWNAMITGYGLHGYGNEALNLFNKMLQSGIPPTGVTFLSILYACSHSGLVREGNEIFH 540

Query: 545 SMVNNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT 604
           SMVNN+GFQPMSEHYACMVDI GRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT
Sbjct: 541 SMVNNFGFQPMSEHYACMVDIFGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT 600

Query: 605 DIAHVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEI 664
           DIAHVAS+RLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKR LAKTPGCTLIEI
Sbjct: 601 DIAHVASERLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRNLAKTPGCTLIEI 660

Query: 665 GNQQYVFTSGDQSHPQAAAIFAMLEKLTGKMREAGYQAETVATALHDVEDEEKELMVNVH 724
            +QQ+VFTSGDQSHP+A AI+AMLEKL GKMREAGYQAETV TALHDVEDEEKELMVNVH
Sbjct: 661 DDQQHVFTSGDQSHPRATAIYAMLEKLIGKMREAGYQAETVTTALHDVEDEEKELMVNVH 720

Query: 725 SEKLAIAFGLISTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNG 784
           SEKLAIAFGLISTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFK+G
Sbjct: 721 SEKLAIAFGLISTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDG 780

Query: 785 ICSCGDYW 793
            CSCGDYW
Sbjct: 781 FCSCGDYW 788

[Close]
BLAST of Clc11G12530 vs. ExPASy TrEMBL
Match: A0A6J1EDA0 (pentatricopeptide repeat-containing protein At4g30700 OS=Cucurbita moschata OX=3662 GN=LOC111433113 PE=3 SV=1)

HSP 1 Score: 1454.1 bits (3763), Expect = 0.0e+00
Identity = 722/788 (91.62%), Postives = 759/788 (96.32%), Query Frame = 0 

Query: 5   MICTNTTTSAIRGQKFLLTLLKKATTLPQLLQIQAQLILHGIHSDISSITKLTHKFFDLG 64
           MICTNT  S IR +KF L LL KATTLPQLLQ+QAQLILHGIH D+SSITKLTHKFFDLG
Sbjct: 1   MICTNTAISVIRDKKFFLALLNKATTLPQLLQVQAQLILHGIHYDLSSITKLTHKFFDLG 60

Query: 65  AIRHVHQLFAKVSKPDLFLFNVLIRGFSDNSLPKSSISLYTHLRKRTNLRPDNFTYAFAI 124
           A+RHV QLFA VS+PDLF+FNVLIRGFSDN+LPKSSIS+YTHLRK TNLRPDNFTYAFAI
Sbjct: 61  AVRHVRQLFANVSRPDLFMFNVLIRGFSDNNLPKSSISVYTHLRKWTNLRPDNFTYAFAI 120

Query: 125 SAASRFEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELAWKVFDVMPERDTV 184
           SAAS+FEDER+GVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRA+LA KVFD MPERDTV
Sbjct: 121 SAASKFEDERLGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRADLARKVFDAMPERDTV 180

Query: 185 LWNTMISGFSRNSCFEDSIRVFVDMLDVGLPFDSTTLAAVLTAVAELQEYRLGMGIQCLA 244
           LWNTMISGFSRNS FEDSIRVFVDMLDVGLPFDSTTLAAVLTAVAELQEYRLGM IQCLA
Sbjct: 181 LWNTMISGFSRNSYFEDSIRVFVDMLDVGLPFDSTTLAAVLTAVAELQEYRLGMSIQCLA 240

Query: 245 LKKGLHSDVYVLTGLISLYSKCGKSDKGRLLFDQIDQPDIISYNAMISGYTFNHETGSAV 304
            KKGLHSDVYVLTGLISL+SKCG+SDK RLLFDQIDQPD+ISYNAMISGYTFNHETGSAV
Sbjct: 241 SKKGLHSDVYVLTGLISLFSKCGESDKARLLFDQIDQPDLISYNAMISGYTFNHETGSAV 300

Query: 305 TLFRELLASGRGINSSTLVGLIPVFSPFGHLQLTRLIQNLSMKIGIILQPSVSTALTTVY 364
           TLFRELLASG+G++SSTLVGLIPVFSPF HLQLTR IQ LS+K+GII +PSVSTALTTVY
Sbjct: 301 TLFRELLASGQGVSSSTLVGLIPVFSPFSHLQLTRSIQTLSIKLGIISKPSVSTALTTVY 360

Query: 365 CRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTESAISLFQEMMPQLSPNPVTVTS 424
           CRLNE+Q+ARQLFDESPEKSLASWNAMISGYTQNGLTESAISLFQEMMPQLSPNPVTVTS
Sbjct: 361 CRLNEIQYARQLFDESPEKSLASWNAMISGYTQNGLTESAISLFQEMMPQLSPNPVTVTS 420

Query: 425 ILSACAQLGALSIGKWVHGLIKSERLESNIYVSTALVDMYAKCGSIVEARQLFDLMAEKN 484
           ILSACAQLGALS+GKWVHGLIKSE+LESNIYV+TALVDMYAKCGS+VEARQLFDL AEKN
Sbjct: 421 ILSACAQLGALSLGKWVHGLIKSEKLESNIYVTTALVDMYAKCGSVVEARQLFDLTAEKN 480

Query: 485 AVTWNAMITGYGLHGHGKEALNLFNEMLQSGIPPTGVTFLSILYACSHSGLVREGNEIFH 544
           AVTWNAMITGYGLHG+G EALNLFN+MLQSGIPPTGVTFLSILYACSHSGLVREGNEIFH
Sbjct: 481 AVTWNAMITGYGLHGYGNEALNLFNKMLQSGIPPTGVTFLSILYACSHSGLVREGNEIFH 540

Query: 545 SMVNNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT 604
           SMVNN+GFQPMSEHYACMVDI GRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT
Sbjct: 541 SMVNNFGFQPMSEHYACMVDIFGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT 600

Query: 605 DIAHVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEI 664
           DIAHVAS+RLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKR LAKTPGCTLIEI
Sbjct: 601 DIAHVASERLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRNLAKTPGCTLIEI 660

Query: 665 GNQQYVFTSGDQSHPQAAAIFAMLEKLTGKMREAGYQAETVATALHDVEDEEKELMVNVH 724
            +QQ+VFTSGD+SHP+A AI+AMLEKL GKMREAGYQAETV TALHDVEDEEKELMVNVH
Sbjct: 661 DDQQHVFTSGDRSHPRAMAIYAMLEKLIGKMREAGYQAETVTTALHDVEDEEKELMVNVH 720

Query: 725 SEKLAIAFGLISTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNG 784
           SEKLAIAFGLISTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFK+G
Sbjct: 721 SEKLAIAFGLISTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDG 780

Query: 785 ICSCGDYW 793
           +CSCGDYW
Sbjct: 781 LCSCGDYW 788

[Close]
BLAST of Clc11G12530 vs. ExPASy TrEMBL
Match: A0A0A0LMK7 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G070330 PE=3 SV=1)

HSP 1 Score: 1438.7 bits (3723), Expect = 0.0e+00
Identity = 722/773 (93.40%), Postives = 741/773 (95.86%), Query Frame = 0 

Query: 20  FLLTLLKKATTLPQLLQIQAQLILHGIHSDISSITKLTHKFFDLGAIRHVHQLFAKVSKP 79
           F LTLL  ATTL QLLQIQAQLILHGIH D+SSITKLTHKFFDLGA+ HV QLF KVSKP
Sbjct: 12  FFLTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKP 71

Query: 80  DLFLFNVLIRGFSDNSLPKSSISLYTHLRKRTNLRPDNFTYAFAISAASRFEDERVGVLL 139
           DLFLFNVLIRGFSDN LPKSSI LYTHLRK+TNLRPDNFTYAFAISAASR EDERVGVLL
Sbjct: 72  DLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLL 131

Query: 140 HAHSIVDGVASNLFVGSAIVDLYFKFTRAELAWKVFDVMPERDTVLWNTMISGFSRNSCF 199
           HAHSIVDGVASNLFVGSAIVDLYFKFTRAELA KVFDVMPERDTVLWNTMISGFSRNS F
Sbjct: 132 HAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYF 191

Query: 200 EDSIRVFVDMLDVGLPFDSTTLAAVLTAVAELQEYRLGMGIQCLALKKGLHSDVYVLTGL 259
           EDSIRVFVDMLDVGL FDSTTLA VLTAVAELQEYRLGMGIQCLA KKGLHSDVYVLTGL
Sbjct: 192 EDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGL 251

Query: 260 ISLYSKCGKSDKGRLLFDQIDQPDIISYNAMISGYTFNHETGSAVTLFRELLASGRGINS 319
           ISLYSKCGKS KGR+LFDQIDQPD+ISYNAMISGYTFNHET SAVTLFRELLASG+ +NS
Sbjct: 252 ISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNS 311

Query: 320 STLVGLIPVFSPFGHLQLTRLIQNLSMKIGIILQPSVSTALTTVYCRLNEVQFARQLFDE 379
           STLVGLIPV+ PF HLQL+RLIQNLS+KIGIILQPSVSTALTTVYCRLNEVQFARQLFDE
Sbjct: 312 STLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDE 371

Query: 380 SPEKSLASWNAMISGYTQNGLTESAISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGK 439
           SPEKSLASWNAMISGYTQNGLT+ AISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGK
Sbjct: 372 SPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGK 431

Query: 440 WVHGLIKSERLESNIYVSTALVDMYAKCGSIVEARQLFDLMAEKNAVTWNAMITGYGLHG 499
           WVHGLIKSERLESN+YVSTALVDMYAKCGSIVEARQLFDLM +KN VTWNAMITGYGLHG
Sbjct: 432 WVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHG 491

Query: 500 HGKEALNLFNEMLQSGIPPTGVTFLSILYACSHSGLVREGNEIFHSMVNNYGFQPMSEHY 559
           HGKEAL LF EMLQSGIPPTGVTFLSILYACSHSGLV EGNEIFHSM NNYGFQPMSEHY
Sbjct: 492 HGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHY 551

Query: 560 ACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTDIAHVASKRLFQLDP 619
           ACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT++A+VASKRLFQLDP
Sbjct: 552 ACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDP 611

Query: 620 ENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIGNQQYVFTSGDQSHP 679
           ENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEI +QQYVFTSGD+SHP
Sbjct: 612 ENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHP 671

Query: 680 QAAAIFAMLEKLTGKMREAGYQAETVATALHDVEDEEKELMVNVHSEKLAIAFGLISTEP 739
           QA AIF MLEKLTGKMREAGYQAETV TALHDVEDEEKELMVNVHSEKLAIAFGLIST+P
Sbjct: 672 QATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKP 731

Query: 740 GTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 793
           GTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW
Sbjct: 732 GTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 784

[Close]
BLAST of Clc11G12530 vs. TAIR 10
Match: AT4G30700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 1016.9 bits (2628), Expect = 8.7e-297
Identity = 510/787 (64.80%), Postives = 615/787 (78.14%), Query Frame = 0 

Query: 8   TNTTTSAIRGQKFLLTLLKKATTLPQLLQIQAQLILHGIHSDISSITKLTHKFFDLGAIR 67
           T  TT+A+  +   L   K++T++  L Q  AQ+ILHG  +DIS +TKLT +  DLGAI 
Sbjct: 10  TAETTAALISKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIY 69

Query: 68  HVHQLFAKVSKPDLFLFNVLIRGFSDNSLPKSSISLYTHLRKRTNLRPDNFTYAFAISAA 127
           +   +F  V +PD+FLFNVL+RGFS N  P SS+S++ HLRK T+L+P++ TYAFAISAA
Sbjct: 70  YARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAA 129

Query: 128 SRFEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELAWKVFDVMPERDTVLWN 187
           S F D+R G ++H  ++VDG  S L +GS IV +YFKF R E A KVFD MPE+DT+LWN
Sbjct: 130 SGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWN 189

Query: 188 TMISGFSRNSCFEDSIRVFVDMLDVGLP-FDSTTLAAVLTAVAELQEYRLGMGIQCLALK 247
           TMISG+ +N  + +SI+VF D+++      D+TTL  +L AVAELQE RLGM I  LA K
Sbjct: 190 TMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATK 249

Query: 248 KGLHSDVYVLTGLISLYSKCGKSDKGRLLFDQIDQPDIISYNAMISGYTFNHETGSAVTL 307
            G +S  YVLTG ISLYSKCGK   G  LF +  +PDI++YNAMI GYT N ET  +++L
Sbjct: 250 TGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSL 309

Query: 308 FRELLASGRGINSSTLVGLIPVFSPFGHLQLTRLIQNLSMKIGIILQPSVSTALTTVYCR 367
           F+EL+ SG  + SSTLV L+PV    GHL L   I    +K   +   SVSTALTTVY +
Sbjct: 310 FKELMLSGARLRSSTLVSLVPV---SGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSK 369

Query: 368 LNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTESAISLFQEMM-PQLSPNPVTVTSI 427
           LNE++ AR+LFDESPEKSL SWNAMISGYTQNGLTE AISLF+EM   + SPNPVT+T I
Sbjct: 370 LNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCI 429

Query: 428 LSACAQLGALSIGKWVHGLIKSERLESNIYVSTALVDMYAKCGSIVEARQLFDLMAEKNA 487
           LSACAQLGALS+GKWVH L++S   ES+IYVSTAL+ MYAKCGSI EAR+LFDLM +KN 
Sbjct: 430 LSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNE 489

Query: 488 VTWNAMITGYGLHGHGKEALNLFNEMLQSGIPPTGVTFLSILYACSHSGLVREGNEIFHS 547
           VTWN MI+GYGLHG G+EALN+F EML SGI PT VTFL +LYACSH+GLV+EG+EIF+S
Sbjct: 490 VTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNS 549

Query: 548 MVNNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTD 607
           M++ YGF+P  +HYACMVDILGRAG L  AL+FIE M +EPG +VW  LLGAC IHK+T+
Sbjct: 550 MIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTN 609

Query: 608 IAHVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIG 667
           +A   S++LF+LDP+NVGY+VLLSNI+S DRN+P+AA+VRQ  KKRKLAK PG TLIEIG
Sbjct: 610 LARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIG 669

Query: 668 NQQYVFTSGDQSHPQAAAIFAMLEKLTGKMREAGYQAETVATALHDVEDEEKELMVNVHS 727
              +VFTSGDQSHPQ   I+  LEKL GKMREAGYQ ET   ALHDVE+EE+ELMV VHS
Sbjct: 670 ETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPET-ELALHDVEEEERELMVKVHS 729

Query: 728 EKLAIAFGLISTEPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGI 787
           E+LAIAFGLI+TEPGTEIRIIKNLRVCLDCHT TK ISKITERVIVVRDANRFHHFK+G+
Sbjct: 730 ERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGV 789

Query: 788 CSCGDYW 793
           CSCGDYW
Sbjct: 790 CSCGDYW 792

[Close]
BLAST of Clc11G12530 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 604.7 bits (1558), Expect = 1.0e-172
Identity = 306/770 (39.74%), Postives = 474/770 (61.56%), Query Frame = 0 

Query: 24  LLKKATTLPQLLQIQAQLILHGIHSDISSITKLTHKFFDLGAIRHVHQLFAKVSKPDLFL 83
           LL++ ++L +L QI   +  +G++ +    TKL   F   G++    ++F  +      L
Sbjct: 43  LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL 102

Query: 84  FNVLIRGFSDNSLPKSSISLYTHLRKRTNLRPDNFTYAFAISAASRFEDERVGVLLHAHS 143
           ++ +++GF+  S    ++  +  +R   ++ P  + + + +       + RVG  +H   
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMR-YDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 162

Query: 144 IVDGVASNLFVGSAIVDLYFKFTRAELAWKVFDVMPERDTVLWNTMISGFSRNSCFEDSI 203
           +  G + +LF  + + ++Y K  +   A KVFD MPERD V WNT+++G+S+N     ++
Sbjct: 163 VKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMAL 222

Query: 204 RVFVDMLDVGLPFDSTTLAAVLTAVAELQEYRLGMGIQCLALKKGLHSDVYVLTGLISLY 263
            +   M +  L     T+ +VL AV+ L+   +G  I   A++ G  S V + T L+ +Y
Sbjct: 223 EMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMY 282

Query: 264 SKCGKSDKGRLLFDQIDQPDIISYNAMISGYTFNHETGSAVTLFRELLASGRGINSSTLV 323
           +KCG  +  R LFD + + +++S+N+MI  Y  N     A+ +F+++L  G      +++
Sbjct: 283 AKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVM 342

Query: 324 GLIPVFSPFGHLQLTRLIQNLSMKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEK 383
           G +   +  G L+  R I  LS+++G+    SV  +L ++YC+  EV  A  +F +   +
Sbjct: 343 GALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSR 402

Query: 384 SLASWNAMISGYTQNGLTESAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVH 443
           +L SWNAMI G+ QNG    A++ F +M  + + P+  T  S+++A A+L      KW+H
Sbjct: 403 TLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIH 462

Query: 444 GLIKSERLESNIYVSTALVDMYAKCGSIVEARQLFDLMAEKNAVTWNAMITGYGLHGHGK 503
           G++    L+ N++V+TALVDMYAKCG+I+ AR +FD+M+E++  TWNAMI GYG HG GK
Sbjct: 463 GVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGK 522

Query: 504 EALNLFNEMLQSGIPPTGVTFLSILYACSHSGLVREGNEIFHSMVNNYGFQPMSEHYACM 563
            AL LF EM +  I P GVTFLS++ ACSHSGLV  G + F+ M  NY  +   +HY  M
Sbjct: 523 AALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAM 582

Query: 564 VDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTDIAHVASKRLFQLDPENV 623
           VD+LGRAG+L  A +FI +MP++P   V+GA+LGAC IHKN + A  A++RLF+L+P++ 
Sbjct: 583 VDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDG 642

Query: 624 GYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIGNQQYVFTSGDQSHPQAA 683
           GY+VLL+NIY     + K   VR  + ++ L KTPGC+++EI N+ + F SG  +HP + 
Sbjct: 643 GYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSK 702

Query: 684 AIFAMLEKLTGKMREAGYQAETVATALHDVEDEEKELMVNVHSEKLAIAFGLISTEPGTE 743
            I+A LEKL   ++EAGY  +T    +  VE++ KE +++ HSEKLAI+FGL++T  GT 
Sbjct: 703 KIYAFLEKLICHIKEAGYVPDT--NLVLGVENDVKEQLLSTHSEKLAISFGLLNTTAGTT 762

Query: 744 IRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 793
           I + KNLRVC DCH ATK+IS +T R IVVRD  RFHHFKNG CSCGDYW
Sbjct: 763 IHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809

[Close]
BLAST of Clc11G12530 vs. TAIR 10
Match: AT4G33990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 552.7 bits (1423), Expect = 4.6e-157
Identity = 293/774 (37.86%), Postives = 454/774 (58.66%), Query Frame = 0 

Query: 23  TLLKKATTLPQLLQIQAQLILHGIHSDISSITKLTHKFFDLGAIRHVHQLFAKVSKPDLF 82
           TL +  T L     + A+L++     ++    KL + +  LG +      F  +   D++
Sbjct: 59  TLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVY 118

Query: 83  LFNVLIRGFSDNSLPKSSISLYTHLRKRTNLRPDNFTYAFAISAASRFEDERVGVLLHAH 142
            +N++I G+         I  ++     + L PD  T+   + A     D   G  +H  
Sbjct: 119 AWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCL 178

Query: 143 SIVDGVASNLFVGSAIVDLYFKFTRAELAWKVFDVMPERDTVLWNTMISGFSRNSCFEDS 202
           ++  G   +++V ++++ LY ++     A  +FD MP RD   WN MISG+ ++   +++
Sbjct: 179 ALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEA 238

Query: 203 IRVFVDMLDVGL-PFDSTTLAAVLTAVAELQEYRLGMGIQCLALKKGLHSDVYVLTGLIS 262
           +      L  GL   DS T+ ++L+A  E  ++  G+ I   ++K GL S+++V   LI 
Sbjct: 239 L-----TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLID 298

Query: 263 LYSKCGKSDKGRLLFDQIDQPDIISYNAMISGYTFNHETGSAVTLFRELLASGRGINSST 322
           LY++ G+    + +FD++   D+IS+N++I  Y  N +   A++LF+E+  S    +  T
Sbjct: 299 LYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLT 358

Query: 323 LVGLIPVFSPFGHLQLTRLIQNLSMKIGIILQP-SVSTALTTVYCRLNEVQFARQLFDES 382
           L+ L  + S  G ++  R +Q  +++ G  L+  ++  A+  +Y +L  V  AR +F+  
Sbjct: 359 LISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWL 418

Query: 383 PEKSLASWNAMISGYTQNGLTESAISLF--QEMMPQLSPNPVTVTSILSACAQLGALSIG 442
           P   + SWN +ISGY QNG    AI ++   E   +++ N  T  S+L AC+Q GAL  G
Sbjct: 419 PNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQG 478

Query: 443 KWVHGLIKSERLESNIYVSTALVDMYAKCGSIVEARQLFDLMAEKNAVTWNAMITGYGLH 502
             +HG +    L  +++V T+L DMY KCG + +A  LF  +   N+V WN +I  +G H
Sbjct: 479 MKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFH 538

Query: 503 GHGKEALNLFNEMLQSGIPPTGVTFLSILYACSHSGLVREGNEIFHSMVNNYGFQPMSEH 562
           GHG++A+ LF EML  G+ P  +TF+++L ACSHSGLV EG   F  M  +YG  P  +H
Sbjct: 539 GHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKH 598

Query: 563 YACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTDIAHVASKRLFQLD 622
           Y CMVD+ GRAGQL  AL+FI+ M L+P  ++WGALL AC +H N D+  +AS+ LF+++
Sbjct: 599 YGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVE 658

Query: 623 PENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIGNQQYVFTSGDQSH 682
           PE+VGY+VLLSN+Y++   +     +R +   + L KTPG + +E+ N+  VF +G+Q+H
Sbjct: 659 PEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTH 718

Query: 683 PQAAAIFAMLEKLTGKMREAGYQAETVATALHDVEDEEKELMVNVHSEKLAIAFGLISTE 742
           P    ++  L  L  K++  GY  +     L DVED+EKE ++  HSE+LAIAF LI+T 
Sbjct: 719 PMYEEMYRELTALQAKLKMIGYVPDH-RFVLQDVEDDEKEHILMSHSERLAIAFALIATP 778

Query: 743 PGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 793
             T IRI KNLRVC DCH+ TKFISKITER I+VRD+NRFHHFKNG+CSCGDYW
Sbjct: 779 AKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823

[Close]
BLAST of Clc11G12530 vs. TAIR 10
Match: AT3G12770.1 (mitochondrial editing factor 22 )

HSP 1 Score: 525.0 bits (1351), Expect = 1.0e-148
Identity = 267/693 (38.53%), Postives = 425/693 (61.33%), Query Frame = 0 

Query: 103 LYTHLRKRTNLRPDNFTYAFAISAASRFEDERVGVLLHAHSIVDGVASNLFVGSAIVDLY 162
           LYT+    + +  D+F  +   SA  + + +++    HA  +V G+  + F+ + ++   
Sbjct: 12  LYTN----SGIHSDSFYASLIDSATHKAQLKQI----HARLLVLGLQFSGFLITKLIHAS 71

Query: 163 FKFTRAELAWKVFDVMPERDTVLWNTMISGFSRNSCFEDSIRVFVDMLDVGLPFDSTTLA 222
             F     A +VFD +P      WN +I G+SRN+ F+D++ ++ +M    +  DS T  
Sbjct: 72  SSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFP 131

Query: 223 AVLTAVAELQEYRLGMGIQCLALKKGLHSDVYVLTGLISLYSKCGKSDKGRLLFDQIDQP 282
            +L A + L   ++G  +     + G  +DV+V  GLI+LY+KC +    R +F+ +  P
Sbjct: 132 HLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLP 191

Query: 283 D--IISYNAMISGYTFNHETGSAVTLFRELLASGRGINSSTLVGLIPVFSPFGHLQLTRL 342
           +  I+S+ A++S Y  N E   A+ +F ++       +   LV ++  F+    L+  R 
Sbjct: 192 ERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRS 251

Query: 343 IQNLSMKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGL 402
           I    +K+G+ ++P +  +L T+Y +  +V  A+ LFD+    +L  WNAMISGY +NG 
Sbjct: 252 IHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGY 311

Query: 403 TESAISLFQEMM-PQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNIYVSTA 462
              AI +F EM+   + P+ +++TS +SACAQ+G+L   + ++  +       ++++S+A
Sbjct: 312 AREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSA 371

Query: 463 LVDMYAKCGSIVEARQLFDLMAEKNAVTWNAMITGYGLHGHGKEALNLFNEMLQSGIPPT 522
           L+DM+AKCGS+  AR +FD   +++ V W+AMI GYGLHG  +EA++L+  M + G+ P 
Sbjct: 372 LIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPN 431

Query: 523 GVTFLSILYACSHSGLVREGNEIFHSMVNNYGFQPMSEHYACMVDILGRAGQLTNALEFI 582
            VTFL +L AC+HSG+VREG   F+ M  ++   P  +HYAC++D+LGRAG L  A E I
Sbjct: 432 DVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVI 491

Query: 583 ERMPLEPGPAVWGALLGACMIHKNTDIAHVASKRLFQLDPENVGYYVLLSNIYSTDRNFP 642
           + MP++PG  VWGALL AC  H++ ++   A+++LF +DP N G+YV LSN+Y+  R + 
Sbjct: 492 KCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWD 551

Query: 643 KAASVRQVVKKRKLAKTPGCTLIEIGNQQYVFTSGDQSHPQAAAIFAMLEKLTGKMREAG 702
           + A VR  +K++ L K  GC+ +E+  +   F  GD+SHP+   I   +E +  +++E G
Sbjct: 552 RVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGG 611

Query: 703 YQAETVATALHDVEDEEKELMVNVHSEKLAIAFGLISTEPGTEIRIIKNLRVCLDCHTAT 762
           + A   A +LHD+ DEE E  +  HSE++AIA+GLIST  GT +RI KNLR C++CH AT
Sbjct: 612 FVANKDA-SLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAAT 671

Query: 763 KFISKITERVIVVRDANRFHHFKNGICSCGDYW 793
           K ISK+ +R IVVRD NRFHHFK+G+CSCGDYW
Sbjct: 672 KLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694

[Close]
BLAST of Clc11G12530 vs. TAIR 10
Match: AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 525.0 bits (1351), Expect = 1.0e-148
Identity = 279/751 (37.15%), Postives = 423/751 (56.32%), Query Frame = 0 

Query: 44  HGIHSDISSITKLTHKFFDLGAIRHVHQLFAKVSKPDLFLFNVLIRGFSDNSLPKSSISL 103
           +G   D +  +KL+  + + G ++   ++F +V       +N+L+   + +     SI L
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182

Query: 104 YTHLRKRTNLRPDNFTYAFAISAASRFEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYF 163
           +  +   + +  D++T++    + S       G  LH   +  G      VG+++V  Y 
Sbjct: 183 FKKMMS-SGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYL 242

Query: 164 KFTRAELAWKVFDVMPERDTVLWNTMISGFSRNSCFEDSIRVFVDMLDVGLPFDSTTLAA 223
           K  R + A KVFD M ERD + WN++I+G+  N   E  + VFV ML  G+  D  T+ +
Sbjct: 243 KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 302

Query: 224 VLTAVAELQEYRLGMGIQCLALKKGLHSDVYVLTGLISLYSKCGKSDKGRLLFDQIDQPD 283
           V    A+ +   LG  +  + +K     +      L+ +YSKCG  D  + +F ++    
Sbjct: 303 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 362

Query: 284 IISYNAMISGYTFNHETGSAVTLFRELLASGRGINSSTLVGLIPVFSPFGHLQLTRLIQN 343
           ++SY +MI+GY      G AV LF E+   G   +  T+  ++   + +  L   + +  
Sbjct: 363 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 422

Query: 344 LSMKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTES 403
              +  +     VS AL  +Y +   +Q A  +F E   K + SWN +I GY++N     
Sbjct: 423 WIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANE 482

Query: 404 AISLFQEMMPQ--LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNIYVSTALV 463
           A+SLF  ++ +   SP+  TV  +L ACA L A   G+ +HG I      S+ +V+ +LV
Sbjct: 483 ALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 542

Query: 464 DMYAKCGSIVEARQLFDLMAEKNAVTWNAMITGYGLHGHGKEALNLFNEMLQSGIPPTGV 523
           DMYAKCG+++ A  LFD +A K+ V+W  MI GYG+HG GKEA+ LFN+M Q+GI    +
Sbjct: 543 DMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEI 602

Query: 524 TFLSILYACSHSGLVREGNEIFHSMVNNYGFQPMSEHYACMVDILGRAGQLTNALEFIER 583
           +F+S+LYACSHSGLV EG   F+ M +    +P  EHYAC+VD+L R G L  A  FIE 
Sbjct: 603 SFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIEN 662

Query: 584 MPLEPGPAVWGALLGACMIHKNTDIAHVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKA 643
           MP+ P   +WGALL  C IH +  +A   ++++F+L+PEN GYYVL++NIY+    + + 
Sbjct: 663 MPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQV 722

Query: 644 ASVRQVVKKRKLAKTPGCTLIEIGNQQYVFTSGDQSHPQAAAIFAMLEKLTGKMREAGYQ 703
             +R+ + +R L K PGC+ IEI  +  +F +GD S+P+   I A L K+  +M E GY 
Sbjct: 723 KRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYS 782

Query: 704 AETVATALHDVEDEEKELMVNVHSEKLAIAFGLISTEPGTEIRIIKNLRVCLDCHTATKF 763
             T   AL D E+ EKE  +  HSEKLA+A G+IS+  G  IR+ KNLRVC DCH   KF
Sbjct: 783 PLT-KYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKF 842

Query: 764 ISKITERVIVVRDANRFHHFKNGICSCGDYW 793
           +SK+T R IV+RD+NRFH FK+G CSC  +W
Sbjct: 843 MSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871

The following BLAST results are available for this feature:
BLAST of Clc11G12530 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038889951.10.0e+0094.95pentatricopeptide repeat-containing protein At4g30700-like isoform X1 [Benincasa... [more]
XP_038889958.10.0e+0095.05pentatricopeptide repeat-containing protein At4g30700-like isoform X2 [Benincasa... [more]
XP_016902152.10.0e+0094.16PREDICTED: pentatricopeptide repeat-containing protein At4g30700 [Cucumis melo] ... [more]
XP_004152852.10.0e+0093.27pentatricopeptide repeat-containing protein At4g30700 [Cucumis sativus][more]
XP_023521013.10.0e+0091.75pentatricopeptide repeat-containing protein At4g30700 [Cucurbita pepo subsp. pep... [more]
BLAST of Clc11G12530 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SUH61.2e-29564.80Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX... [more]
Q3E6Q11.4e-17139.74Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
O817676.5e-15637.86Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX... [more]
Q9LTV81.5e-14738.53Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX... [more]
Q9SN391.5e-14737.15Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... [more]
BLAST of Clc11G12530 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7U0780.0e+0094.16Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S4E1Q10.0e+0094.16pentatricopeptide repeat-containing protein At4g30700 OS=Cucumis melo OX=3656 GN... [more]
A0A6J1IEL00.0e+0091.75pentatricopeptide repeat-containing protein At4g30700 OS=Cucurbita maxima OX=366... [more]
A0A6J1EDA00.0e+0091.62pentatricopeptide repeat-containing protein At4g30700 OS=Cucurbita moschata OX=3... [more]
A0A0A0LMK70.0e+0093.40DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G0703... [more]
BLAST of Clc11G12530 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G30700.18.7e-29764.80Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G11290.11.0e-17239.74Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G33990.14.6e-15737.86Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G12770.11.0e-14838.53mitochondrial editing factor 22 [more]
AT4G18750.11.0e-14837.15Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 184..217
e-value: 4.8E-6
score: 24.4
coord: 387..412
e-value: 2.4E-6
score: 25.3
coord: 486..519
e-value: 1.9E-8
score: 31.9
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 386..430
e-value: 5.6E-9
score: 36.1
coord: 483..530
e-value: 3.1E-12
score: 46.5
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 257..279
e-value: 0.49
score: 10.8
coord: 184..213
e-value: 3.5E-5
score: 23.8
coord: 559..582
e-value: 0.59
score: 10.5
coord: 285..314
e-value: 0.0049
score: 17.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 484..518
score: 13.285153
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 384..419
score: 9.96388
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 182..216
score: 10.588674
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 283..317
score: 8.714292
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 436..551
e-value: 9.4E-28
score: 99.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 338..435
e-value: 6.0E-16
score: 60.3
coord: 135..236
e-value: 2.8E-16
score: 61.4
coord: 19..134
e-value: 6.1E-7
score: 30.9
coord: 240..337
e-value: 4.6E-13
score: 50.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 358..644
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 657..782
e-value: 8.0E-41
score: 138.9
NoneNo IPR availablePANTHERPTHR47924PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 51..786
NoneNo IPR availablePANTHERPTHR47924:SF42PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 51..786

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc11G12530.1Clc11G12530.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009451 RNA modification
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0005515 protein binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0008270 zinc ion binding