Clc11G09940 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc11G09940
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Glutaredoxin
Location	ClcChr11: 12870549 .. 12871158 (+)
RNA-Seq Expression	Clc11G09940
Synteny	Clc11G09940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCATCTTTTGCGTTTTGTGTTCTTGTGTGGGAAGCAAACATGCATTATCAAACCACTCCATCTTGGGGTTGTTACATGTCCACATCCGCCCTCGAGGATCCGCTAGAGCGGATAGAGCGGTTAGCAGCCGAGAATGCGGTGGTTATATTTAGCGTTAGTACGTGTTGCATGTGTCATGCTATAAAGCGGTTGTTTTGTGGAATGGGAGTGAATCCAACAGTCTATGAACTTGACGAAGACCCCAGAGGAGGAGACATGGAGAAGGCACTCATGAGGCTTTTGGGAAGCTCCTCTCCTGTCCCCATTGTGTTCATCGGTGGTAAACTTGTCGGTGCAATGGATAGAGTCATGGCCTCTCATATCAGTGGAACTCTTGTTCCTCTCCTTAAAGACGCTGGAGCTCTCTGGCTTTGACTATAATCTCTCTAGAAAAATTTATTCGTAGAGGTTAGAGGAATGTGACTGACAATTCTATACCGTTGCAGGTAGAGGGACAAATTAAAATTTATAATTTGACCTACCTCCAATGATTTAGATGAGACAGTTACCCTAAATCTATCTCAATGAATAATTTTTCATTTTACTCAATTATTATGCAAACCAAGGGAAA

mRNA sequence

CCATCTTTTGCGTTTTGTGTTCTTGTGTGGGAAGCAAACATGCATTATCAAACCACTCCATCTTGGGGTTGTTACATGTCCACATCCGCCCTCGAGGATCCGCTAGAGCGGATAGAGCGGTTAGCAGCCGAGAATGCGGTGGTTATATTTAGCGTTAGTACGTGTTGCATGTGTCATGCTATAAAGCGGTTGTTTTGTGGAATGGGAGTGAATCCAACAGTCTATGAACTTGACGAAGACCCCAGAGGAGGAGACATGGAGAAGGCACTCATGAGGCTTTTGGGAAGCTCCTCTCCTGTCCCCATTGTGTTCATCGGTGGTAAACTTGTCGGTGCAATGGATAGAGTCATGGCCTCTCATATCAGTGGAACTCTTGTTCCTCTCCTTAAAGACGCTGGAGCTCTCTGGCTTTGACTATAATCTCTCTAGAAAAATTTATTCGTAGAGGTTAGAGGAATGTGACTGACAATTCTATACCGTTGCAGGTAGAGGGACAAATTAAAATTTATAATTTGACCTACCTCCAATGATTTAGATGAGACAGTTACCCTAAATCTATCTCAATGAATAATTTTTCATTTTACTCAATTATTATGCAAACCAAGGGAAA

Coding sequence (CDS)

ATGCATTATCAAACCACTCCATCTTGGGGTTGTTACATGTCCACATCCGCCCTCGAGGATCCGCTAGAGCGGATAGAGCGGTTAGCAGCCGAGAATGCGGTGGTTATATTTAGCGTTAGTACGTGTTGCATGTGTCATGCTATAAAGCGGTTGTTTTGTGGAATGGGAGTGAATCCAACAGTCTATGAACTTGACGAAGACCCCAGAGGAGGAGACATGGAGAAGGCACTCATGAGGCTTTTGGGAAGCTCCTCTCCTGTCCCCATTGTGTTCATCGGTGGTAAACTTGTCGGTGCAATGGATAGAGTCATGGCCTCTCATATCAGTGGAACTCTTGTTCCTCTCCTTAAAGACGCTGGAGCTCTCTGGCTTTGA

Protein sequence

MHYQTTPSWGCYMSTSALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGAMDRVMASHISGTLVPLLKDAGALWL

Homology

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BLAST of Clc11G09940 vs. NCBI nr
Match: KGN63349.2 (hypothetical protein Csa_022404 [Cucumis sativus])

HSP 1 Score: 254.6 bits (649), Expect = 4.4e-64
Identity = 120/124 (96.77%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MHYQTTPSWGCYMSTSALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT 60
           MHYQTTPSWGCYMSTS+LEDP++RIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT
Sbjct: 13  MHYQTTPSWGCYMSTSSLEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT 72

Query: 61  VYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGAMDRVMASHISGTLVPLLKDAG 120
           VYELDEDPRGGDMEKALMRLLGSSSPVP+VFIGGKLVGAMDRVMASHISGTLVPLLKDAG
Sbjct: 73  VYELDEDPRGGDMEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDAG 132

Query: 121 ALWL 125
           ALWL
Sbjct: 133 ALWL 136

[Close]

BLAST of Clc11G09940 vs. NCBI nr
Match: XP_008441305.1 (PREDICTED: glutaredoxin-C1 [Cucumis melo])

HSP 1 Score: 253.8 bits (647), Expect = 7.5e-64
Identity = 119/124 (95.97%), Postives = 123/124 (99.19%), Query Frame = 0


Query: 1   MHYQTTPSWGCYMSTSALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT 60
           MHYQTTPSWGCYMSTS LEDP++RIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT
Sbjct: 1   MHYQTTPSWGCYMSTSVLEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT 60

Query: 61  VYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGAMDRVMASHISGTLVPLLKDAG 120
           VYELDEDPRGGDMEKALMRLLGSSSPVP+VF+GGKLVGAMDRVMASHISGTLVPLLKDAG
Sbjct: 61  VYELDEDPRGGDMEKALMRLLGSSSPVPVVFVGGKLVGAMDRVMASHISGTLVPLLKDAG 120

Query: 121 ALWL 125
           ALWL
Sbjct: 121 ALWL 124

[Close]

BLAST of Clc11G09940 vs. NCBI nr
Match: XP_038886351.1 (glutaredoxin-C1 [Benincasa hispida])

HSP 1 Score: 253.1 bits (645), Expect = 1.3e-63
Identity = 119/124 (95.97%), Postives = 123/124 (99.19%), Query Frame = 0


Query: 1   MHYQTTPSWGCYMSTSALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT 60
           MHYQTTPSWGCY+STSALEDP+ERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT
Sbjct: 1   MHYQTTPSWGCYVSTSALEDPIERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT 60

Query: 61  VYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGAMDRVMASHISGTLVPLLKDAG 120
           VYELDEDPRGGDMEKALMRLLGSSSPVP+VFIGGKLVGAMDRVMASHI+GTLVPLLKD G
Sbjct: 61  VYELDEDPRGGDMEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHINGTLVPLLKDVG 120

Query: 121 ALWL 125
           ALWL
Sbjct: 121 ALWL 124

[Close]

BLAST of Clc11G09940 vs. NCBI nr
Match: XP_023551484.1 (glutaredoxin-C1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 239.6 bits (610), Expect = 1.5e-59
Identity = 114/125 (91.20%), Postives = 122/125 (97.60%), Query Frame = 0


Query: 1   MHYQTTPSWGCYM-STSALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNP 60
           MHYQTTPSWGCYM +T+ALEDP+ERIERLAAENAVVIFS+STCCMCHAIKRLFCGMGVNP
Sbjct: 1   MHYQTTPSWGCYMATTAALEDPVERIERLAAENAVVIFSISTCCMCHAIKRLFCGMGVNP 60

Query: 61  TVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGAMDRVMASHISGTLVPLLKDA 120
           TV+ELDEDPRGG+MEKALM LLG+SS VP+VFIGGKLVGAMDRVMASHISGTLVPLLKDA
Sbjct: 61  TVHELDEDPRGGEMEKALMTLLGTSSAVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDA 120

Query: 121 GALWL 125
           GALWL
Sbjct: 121 GALWL 125

[Close]

BLAST of Clc11G09940 vs. NCBI nr
Match: XP_022939500.1 (glutaredoxin-C1 [Cucurbita moschata] >XP_022992843.1 glutaredoxin-C1-like [Cucurbita maxima])

HSP 1 Score: 238.4 bits (607), Expect = 3.3e-59
Identity = 113/125 (90.40%), Postives = 122/125 (97.60%), Query Frame = 0


Query: 1   MHYQTTPSWGCYM-STSALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNP 60
           MHYQTTPSWGCYM +T+A+EDP+ERIERLAAENAVVIFS+STCCMCHAIKRLFCGMGVNP
Sbjct: 1   MHYQTTPSWGCYMATTAAVEDPVERIERLAAENAVVIFSISTCCMCHAIKRLFCGMGVNP 60

Query: 61  TVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGAMDRVMASHISGTLVPLLKDA 120
           TV+ELDEDPRGG+MEKALM LLG+SS VP+VFIGGKLVGAMDRVMASHISGTLVPLLKDA
Sbjct: 61  TVHELDEDPRGGEMEKALMTLLGTSSAVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDA 120

Query: 121 GALWL 125
           GALWL
Sbjct: 121 GALWL 125

[Close]

BLAST of Clc11G09940 vs. ExPASy Swiss-Prot
Match: Q6K609 (Glutaredoxin-C3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC3 PE=2 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.1e-41
Identity = 84/135 (62.22%), Postives = 104/135 (77.04%), Query Frame = 0


Query: 1   MHYQTTPSWGCYMSTSA----LEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMG 60
           M Y        YM  +A    +E  + R+ERLA+E+AVV+FSVS+CCMCHA+KRLFCGMG
Sbjct: 1   MQYGAAAEQAWYMPAAAPAPMVESAVARVERLASESAVVVFSVSSCCMCHAVKRLFCGMG 60

Query: 61  VNPTVYELDEDPRGGDMEKALMRLLGSSSP-------VPIVFIGGKLVGAMDRVMASHIS 120
           V+PTV+ELD DPRG ++E+AL RL+G   P       VP+VFIGGKLVGAMDRVMA+HI+
Sbjct: 61  VHPTVHELDLDPRGRELERALARLVGYGGPAAASPPVVPVVFIGGKLVGAMDRVMAAHIN 120

Query: 121 GTLVPLLKDAGALWL 125
           G+LVPLLK+AGALWL
Sbjct: 121 GSLVPLLKEAGALWL 135

[Close]

BLAST of Clc11G09940 vs. ExPASy Swiss-Prot
Match: Q0JDM4 (Glutaredoxin-C5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC5 PE=2 SV=2)

HSP 1 Score: 169.9 bits (429), Expect = 1.9e-41
Identity = 80/113 (70.80%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 16  SALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEK 75
           +A E   ER+ERLA+E+AVV+FSVS+CCMCHA+KRLFCGMGV+P V+ELD DPRG D+E+
Sbjct: 23  AAAETAAERVERLASESAVVVFSVSSCCMCHAVKRLFCGMGVHPAVHELDLDPRGRDLER 82

Query: 76  ALMRLLG----SSSPVPIVFIGGKLVGAMDRVMASHISGTLVPLLKDAGALWL 125
           AL RL+G    +++ VP+VFIGGKLVGAMDRVMA+HI+G+LVPLLK+AGALWL
Sbjct: 83  ALARLVGAGGAAAAAVPVVFIGGKLVGAMDRVMAAHINGSLVPLLKEAGALWL 135

[Close]

BLAST of Clc11G09940 vs. ExPASy Swiss-Prot
Match: Q96305 (Glutaredoxin-C7 OS=Arabidopsis thaliana OX=3702 GN=GRXC7 PE=1 SV=2)

HSP 1 Score: 167.5 bits (423), Expect = 9.2e-41
Identity = 91/137 (66.42%), Postives = 106/137 (77.37%), Query Frame = 0


Query: 1   MHYQTTPSWGCYMSTS--------ALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLF 60
           M YQ T SWG Y  +S          +  L RIE LA+E+AVVIFSVSTCCMCHA+K LF
Sbjct: 1   MQYQ-TESWGSYKMSSLGFGGLGMVADTGLLRIESLASESAVVIFSVSTCCMCHAVKGLF 60

Query: 61  CGMGVNPTVYELDEDPRGGDMEKALMRLL---GSSSP--VPIVFIGGKLVGAMDRVMASH 120
            GMGV+P V+ELD  P GGD+++AL+RLL   GSSSP  +P+VFIGGKLVGAMDRVMASH
Sbjct: 61  RGMGVSPAVHELDLHPYGGDIQRALIRLLGCSGSSSPGSLPVVFIGGKLVGAMDRVMASH 120

Query: 121 ISGTLVPLLKDAGALWL 125
           I+G+LVPLLKDAGALWL
Sbjct: 121 INGSLVPLLKDAGALWL 136

[Close]

BLAST of Clc11G09940 vs. ExPASy Swiss-Prot
Match: Q7G8Y5 (Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 2.1e-37
Identity = 71/103 (68.93%), Postives = 88/103 (85.44%), Query Frame = 0


Query: 22  LERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLL 81
           ++R+ RLAA+ AVVIFS+S+CCMCH + RLFC +GVNPTV ELDEDPRG +MEKAL RLL
Sbjct: 1   MDRVNRLAAQRAVVIFSMSSCCMCHTVTRLFCELGVNPTVVELDEDPRGKEMEKALARLL 60

Query: 82  GSSSPVPIVFIGGKLVGAMDRVMASHISGTLVPLLKDAGALWL 125
           G S  VP VFIGG+LVG+ D+VM+ H+SG LVPLL++AGALW+
Sbjct: 61  GRSPAVPAVFIGGRLVGSTDKVMSLHLSGNLVPLLRNAGALWV 103

[Close]

BLAST of Clc11G09940 vs. ExPASy Swiss-Prot
Match: Q8LF89 (Glutaredoxin-C8 OS=Arabidopsis thaliana OX=3702 GN=GRXC8 PE=1 SV=2)

HSP 1 Score: 154.8 bits (390), Expect = 6.2e-37
Identity = 78/112 (69.64%), Postives = 93/112 (83.04%), Query Frame = 0


Query: 20  DPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMR 79
           + L +IE +AAENAVVIFSVSTCCMCHAIKRLF GMGV+P V+ELD  P G ++ +AL+R
Sbjct: 29  ETLAKIESMAAENAVVIFSVSTCCMCHAIKRLFRGMGVSPAVHELDLLPYGVEIHRALLR 88

Query: 80  LLGSSS-------PVPIVFIGGKLVGAMDRVMASHISGTLVPLLKDAGALWL 125
           LLG SS        +P+VFIGGK+VGAM+RVMASHI+G+LVPLLKDAGALWL
Sbjct: 89  LLGCSSGGATSPGALPVVFIGGKMVGAMERVMASHINGSLVPLLKDAGALWL 140

[Close]

BLAST of Clc11G09940 vs. ExPASy TrEMBL
Match: A0A0A0LMK1 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G405010 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.1e-64
Identity = 120/124 (96.77%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MHYQTTPSWGCYMSTSALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT 60
           MHYQTTPSWGCYMSTS+LEDP++RIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT
Sbjct: 1   MHYQTTPSWGCYMSTSSLEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT 60

Query: 61  VYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGAMDRVMASHISGTLVPLLKDAG 120
           VYELDEDPRGGDMEKALMRLLGSSSPVP+VFIGGKLVGAMDRVMASHISGTLVPLLKDAG
Sbjct: 61  VYELDEDPRGGDMEKALMRLLGSSSPVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDAG 120

Query: 121 ALWL 125
           ALWL
Sbjct: 121 ALWL 124

[Close]

BLAST of Clc11G09940 vs. ExPASy TrEMBL
Match: A0A1S3B356 (glutaredoxin-C1 OS=Cucumis melo OX=3656 GN=LOC103485463 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 3.6e-64
Identity = 119/124 (95.97%), Postives = 123/124 (99.19%), Query Frame = 0


Query: 1   MHYQTTPSWGCYMSTSALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT 60
           MHYQTTPSWGCYMSTS LEDP++RIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT
Sbjct: 1   MHYQTTPSWGCYMSTSVLEDPVDRIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPT 60

Query: 61  VYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGAMDRVMASHISGTLVPLLKDAG 120
           VYELDEDPRGGDMEKALMRLLGSSSPVP+VF+GGKLVGAMDRVMASHISGTLVPLLKDAG
Sbjct: 61  VYELDEDPRGGDMEKALMRLLGSSSPVPVVFVGGKLVGAMDRVMASHISGTLVPLLKDAG 120

Query: 121 ALWL 125
           ALWL
Sbjct: 121 ALWL 124

[Close]

BLAST of Clc11G09940 vs. ExPASy TrEMBL
Match: A0A6J1K0D7 (glutaredoxin-C1-like OS=Cucurbita maxima OX=3661 GN=LOC111489051 PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.6e-59
Identity = 113/125 (90.40%), Postives = 122/125 (97.60%), Query Frame = 0


Query: 1   MHYQTTPSWGCYM-STSALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNP 60
           MHYQTTPSWGCYM +T+A+EDP+ERIERLAAENAVVIFS+STCCMCHAIKRLFCGMGVNP
Sbjct: 1   MHYQTTPSWGCYMATTAAVEDPVERIERLAAENAVVIFSISTCCMCHAIKRLFCGMGVNP 60

Query: 61  TVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGAMDRVMASHISGTLVPLLKDA 120
           TV+ELDEDPRGG+MEKALM LLG+SS VP+VFIGGKLVGAMDRVMASHISGTLVPLLKDA
Sbjct: 61  TVHELDEDPRGGEMEKALMTLLGTSSAVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDA 120

Query: 121 GALWL 125
           GALWL
Sbjct: 121 GALWL 125

[Close]

BLAST of Clc11G09940 vs. ExPASy TrEMBL
Match: A0A6J1FMV7 (glutaredoxin-C1 OS=Cucurbita moschata OX=3662 GN=LOC111445384 PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.6e-59
Identity = 113/125 (90.40%), Postives = 122/125 (97.60%), Query Frame = 0


Query: 1   MHYQTTPSWGCYM-STSALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNP 60
           MHYQTTPSWGCYM +T+A+EDP+ERIERLAAENAVVIFS+STCCMCHAIKRLFCGMGVNP
Sbjct: 1   MHYQTTPSWGCYMATTAAVEDPVERIERLAAENAVVIFSISTCCMCHAIKRLFCGMGVNP 60

Query: 61  TVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGAMDRVMASHISGTLVPLLKDA 120
           TV+ELDEDPRGG+MEKALM LLG+SS VP+VFIGGKLVGAMDRVMASHISGTLVPLLKDA
Sbjct: 61  TVHELDEDPRGGEMEKALMTLLGTSSAVPVVFIGGKLVGAMDRVMASHISGTLVPLLKDA 120

Query: 121 GALWL 125
           GALWL
Sbjct: 121 GALWL 125

[Close]

BLAST of Clc11G09940 vs. ExPASy TrEMBL
Match: A0A6J1BY71 (glutaredoxin-C1-like OS=Momordica charantia OX=3673 GN=LOC111006535 PE=3 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.6e-56
Identity = 109/125 (87.20%), Postives = 117/125 (93.60%), Query Frame = 0


Query: 1   MHYQTTPSWGCYMSTSAL-EDPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNP 60
           MHYQT   WGCY+  +A  EDP+ERI+RLAAENAVVIFS+STCCMCHAIKRLFCGMGVNP
Sbjct: 1   MHYQTQQPWGCYVGRAAAGEDPVERIQRLAAENAVVIFSMSTCCMCHAIKRLFCGMGVNP 60

Query: 61  TVYELDEDPRGGDMEKALMRLLGSSSPVPIVFIGGKLVGAMDRVMASHISGTLVPLLKDA 120
           TVYELDEDPRGGDMEKALMRLLG+SS VP+VFIGGKLVGAMDRVMASHISG+LVPLLKDA
Sbjct: 61  TVYELDEDPRGGDMEKALMRLLGTSSAVPVVFIGGKLVGAMDRVMASHISGSLVPLLKDA 120

Query: 121 GALWL 125
           GALWL
Sbjct: 121 GALWL 125

[Close]

BLAST of Clc11G09940 vs. TAIR 10
Match: AT3G02000.1 (Thioredoxin superfamily protein )

HSP 1 Score: 167.5 bits (423), Expect = 6.6e-42
Identity = 91/137 (66.42%), Postives = 106/137 (77.37%), Query Frame = 0


Query: 1   MHYQTTPSWGCYMSTS--------ALEDPLERIERLAAENAVVIFSVSTCCMCHAIKRLF 60
           M YQ T SWG Y  +S          +  L RIE LA+E+AVVIFSVSTCCMCHA+K LF
Sbjct: 1   MQYQ-TESWGSYKMSSLGFGGLGMVADTGLLRIESLASESAVVIFSVSTCCMCHAVKGLF 60

Query: 61  CGMGVNPTVYELDEDPRGGDMEKALMRLL---GSSSP--VPIVFIGGKLVGAMDRVMASH 120
            GMGV+P V+ELD  P GGD+++AL+RLL   GSSSP  +P+VFIGGKLVGAMDRVMASH
Sbjct: 61  RGMGVSPAVHELDLHPYGGDIQRALIRLLGCSGSSSPGSLPVVFIGGKLVGAMDRVMASH 120

Query: 121 ISGTLVPLLKDAGALWL 125
           I+G+LVPLLKDAGALWL
Sbjct: 121 INGSLVPLLKDAGALWL 136

[Close]

BLAST of Clc11G09940 vs. TAIR 10
Match: AT5G14070.1 (Thioredoxin superfamily protein )

HSP 1 Score: 154.8 bits (390), Expect = 4.4e-38
Identity = 78/112 (69.64%), Postives = 93/112 (83.04%), Query Frame = 0


Query: 20  DPLERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMR 79
           + L +IE +AAENAVVIFSVSTCCMCHAIKRLF GMGV+P V+ELD  P G ++ +AL+R
Sbjct: 29  ETLAKIESMAAENAVVIFSVSTCCMCHAIKRLFRGMGVSPAVHELDLLPYGVEIHRALLR 88

Query: 80  LLGSSS-------PVPIVFIGGKLVGAMDRVMASHISGTLVPLLKDAGALWL 125
           LLG SS        +P+VFIGGK+VGAM+RVMASHI+G+LVPLLKDAGALWL
Sbjct: 89  LLGCSSGGATSPGALPVVFIGGKMVGAMERVMASHINGSLVPLLKDAGALWL 140

[Close]

BLAST of Clc11G09940 vs. TAIR 10
Match: AT4G15700.1 (Thioredoxin superfamily protein )

HSP 1 Score: 121.3 bits (303), Expect = 5.4e-28
Identity = 57/103 (55.34%), Postives = 80/103 (77.67%), Query Frame = 0


Query: 22  LERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLL 81
           +E ++++ +E +VVIFS ++CCM H IK LF  +GVNPT+YELDE  RG ++E AL + L
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQ-L 60

Query: 82  GSSSPVPIVFIGGKLVGAMDRVMASHISGTLVPLLKDAGALWL 125
           G S  VP+VFIGG+LVG  ++VM+ H++ +LVP+LK AGALWL
Sbjct: 61  GCSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of Clc11G09940 vs. TAIR 10
Match: AT2G47870.1 (Thioredoxin superfamily protein )

HSP 1 Score: 120.6 bits (301), Expect = 9.2e-28
Identity = 52/103 (50.49%), Postives = 77/103 (74.76%), Query Frame = 0


Query: 22  LERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLL 81
           +ER+  LA+E A VIF+ S+CCMCH+IK LF  +G +P ++ELD+DP+G DME+AL R+ 
Sbjct: 1   MERVRDLASEKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPQGPDMERALFRVF 60

Query: 82  GSSSPVPIVFIGGKLVGAMDRVMASHISGTLVPLLKDAGALWL 125
           GS+  VP VF+GG+ VG+   V++ H+ G+L  +LK + A+WL
Sbjct: 61  GSNPAVPAVFVGGRYVGSAKDVISFHVDGSLKQMLKASNAIWL 103

[Close]

BLAST of Clc11G09940 vs. TAIR 10
Match: AT4G15670.1 (Thioredoxin superfamily protein )

HSP 1 Score: 119.8 bits (299), Expect = 1.6e-27
Identity = 54/103 (52.43%), Postives = 81/103 (78.64%), Query Frame = 0


Query: 22  LERIERLAAENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVYELDEDPRGGDMEKALMRLL 81
           +E+++++ +E ++VIFS ++CCM H IK LF  +GVNPT+YELDE  RG ++E+AL + L
Sbjct: 1   MEKLQKMTSEKSLVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEQALAQ-L 60

Query: 82  GSSSPVPIVFIGGKLVGAMDRVMASHISGTLVPLLKDAGALWL 125
           G S  VP+VFIGG+LVG  ++VM+ H++ +L+P+LK  GALWL
Sbjct: 61  GCSPTVPVVFIGGQLVGGANQVMSLHLNRSLIPMLKRVGALWL 102

The following BLAST results are available for this feature:

BLAST of Clc11G09940 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN63349.2	4.4e-64	96.77	hypothetical protein Csa_022404 [Cucumis sativus]	[more]
XP_008441305.1	7.5e-64	95.97	PREDICTED: glutaredoxin-C1 [Cucumis melo]	[more]
XP_038886351.1	1.3e-63	95.97	glutaredoxin-C1 [Benincasa hispida]	[more]
XP_023551484.1	1.5e-59	91.20	glutaredoxin-C1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022939500.1	3.3e-59	90.40	glutaredoxin-C1 [Cucurbita moschata] >XP_022992843.1 glutaredoxin-C1-like [Cucur...	[more]

BLAST of Clc11G09940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6K609	1.1e-41	62.22	Glutaredoxin-C3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC3 PE=2 SV=1	[more]
Q0JDM4	1.9e-41	70.80	Glutaredoxin-C5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC5 PE=2 SV=2	[more]
Q96305	9.2e-41	66.42	Glutaredoxin-C7 OS=Arabidopsis thaliana OX=3702 GN=GRXC7 PE=1 SV=2	[more]
Q7G8Y5	2.1e-37	68.93	Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1	[more]
Q8LF89	6.2e-37	69.64	Glutaredoxin-C8 OS=Arabidopsis thaliana OX=3702 GN=GRXC8 PE=1 SV=2	[more]

BLAST of Clc11G09940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMK1	2.1e-64	96.77	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G40501...	[more]
A0A1S3B356	3.6e-64	95.97	glutaredoxin-C1 OS=Cucumis melo OX=3656 GN=LOC103485463 PE=3 SV=1	[more]
A0A6J1K0D7	1.6e-59	90.40	glutaredoxin-C1-like OS=Cucurbita maxima OX=3661 GN=LOC111489051 PE=3 SV=1	[more]
A0A6J1FMV7	1.6e-59	90.40	glutaredoxin-C1 OS=Cucurbita moschata OX=3662 GN=LOC111445384 PE=3 SV=1	[more]
A0A6J1BY71	1.6e-56	87.20	glutaredoxin-C1-like OS=Momordica charantia OX=3673 GN=LOC111006535 PE=3 SV=1	[more]

BLAST of Clc11G09940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02000.1	6.6e-42	66.42	Thioredoxin superfamily protein	[more]
AT5G14070.1	4.4e-38	69.64	Thioredoxin superfamily protein	[more]
AT4G15700.1	5.4e-28	55.34	Thioredoxin superfamily protein	[more]
AT2G47870.1	9.2e-28	50.49	Thioredoxin superfamily protein	[more]
AT4G15670.1	1.6e-27	52.43	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 16..123 e-value: 1.6E-29 score: 103.8
None	No IPR available	PANTHER	PTHR10168:SF215	GLUTAREDOXIN-C5	coord: 7..123
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 22..123 score: 22.474686
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 33..115 e-value: 9.65272E-39 score: 123.419
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 25..124 e-value: 5.0E-43 score: 143.1
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 7..123
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 34..97 e-value: 5.0E-13 score: 49.1
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 20..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc11G09940.1	Clc11G09940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048653	anther development
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0097573	glutathione oxidoreductase activity