Clc11G09530 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGTTGAGCAGTTTATACCCTTTAAACCCTAGCAAAGTTCCACTGGCTGGTCAGAGGGGGAAGTGAAGGTTTGTTTCGGTTCAATTCTACATTCTGCTTCCACATTGAGAATGGAACTCCATTGCTCAACTCTCCAGACCTCATTATCCTTCTCTGTCAGAGGAAAAGTTCTTGCTCATGGAGACGCCTCTGCGGCCTGCTCTCCCTCCTCGTCTTCGTTTTCAAGAATTACAGCTCGAAACTTCTCTTTGGGTCCAAAAAGTAGAGGTAAGGTAGCTAACTCTGAACTTTGTTAAGTTTCCGATGAGTCGCTAAGGATGAACCATGCGATTGATATCTCTGTAGTATTGCTCAATGGTTTCAATTTCAGACGGTTGTTAAAAGGGGAACGTGGAGAAAAAGGATAAAGATTTTGATTCTGTGCTCTTTCCGCGTTCTGTTCATAATACGGCTGAACTATTCACGACTTGGAAAAATGGTCATTAAGTATTGTTTAAACCGAGACGTGGAAATTCGGCCACAGAAATTTTCTCTCTATTTACATATGTGTGTGTGTCTGTGTCTGTGTGTGTATAGCTATGCATTGGTCTAGATGCTGAATATCTCTTGTTTGAATTATTGATTCCTTATAGTTCGTGTTTCAAGCTTCATATTGACTTTAGCTTACCAGTCACAAAGTGAAGGTAGTATGAATAGTCTAAAATTGTAAAAACTTAAGAAAGTTTATCACAATGTTCTTTATTAAAGTAGAGTGAAGTATTAGTAATTTTGTTGAATAGCAGGGTTCCCTTCACTGGTATGTCGAGTTAGACTGAAGAACTCATCCTTTTCTGCCGTTGTCAGAGGGGAGAGTGCAGTACCTAGTGATTGTAATTCAGAAACTCTTGATTCGTCGAATCCCAATCCCAATGAGCTGGTAAGAGATGTTCAAAATGCAAAAGACAGTGTTGAAAGCTTGGACCAGCATAAAATGACCAAAGTGTGTGATAAGCTCATTGAAGTCTTCATGATCGACAAGCCAACCCCAACAGATTGGAGACGGTTAATCGCTTTCAGCAAGGAATGGGACAATATCCGTCCCCATTTCTTTAGGAGGTGCCAAGATCGAGCTGTCTCGGAAGATGATCCTGGGATGAGGCATAAGCTACTCAAGCTTGGAAGAAAGTTGAAAGAGGTATGTCTTGAGAAAGGCAGGCCTTGTTTCTATAAAATAATTTATTGAGCAAATAAGATGAGTATAAACTAACACTTCGTATGCAAATAGGTTATTAGGTCTATGATTGTAAAAGCCCCAGAGGATGTGTTACTGAGGGGGTTAAGATGAATTGTTGACAATGACATGATTATTTTATTGATCAGATAATAGTTGCAGTATGTGAGTTTTCAATCGACCTTTTCTTTTCCCTTCTACAAAATTTTCACAGATTGATGAAGATGTGCAGAGACACAATGAACTTCTTGAAGTGGTCAGAGCAGTGGCACCATCAGAACTTGGTGAAATTATTTCTAGGCGTCGCAAAGATTTTACAAAAGAATTCTTTGTACATCTTCACACGGTGGCTGAATCTTATTATGATGATCCGGCTGAGCAAAATGGTAATACTGCTTACTTTCCAGTTGGATAAATAGTAATGAATAAATAGCTTCCCATGGGGCTGAAGAAGTGTAATTTAAGAAGTAAATATGCGGGTAGAAAAATACCTTTTTGGTCTCCAAATTTTTAGTATAGTTTTGATTTGTTCATTAAGTTTTAAAATGTTACATTGAGTTTTGAGTTTAATTTCCATTTGATCCTTCGAAGTTAAAATGTCATCTTGAGATGACCAAATGGAAAATATACTCAAAACTCAGGGCAAAGGGATAATTTCTCCTATATTGTTTTAGGCTATTCAAAGGATGAGTGGGCCCTTGAAATTGTTCCTTATCTTAAAATCTACCTTAAGTAGCTAGATTGGTTAAGACATTATGTGTGTTTGTCATATGTTCAAATCTTTACCTCCACATTCTTTAATTTTTTTTTCCTTTTGTTAATGATGTCTTCTTTCTTTAGCAAACGTCTTTTTTCTTATATGCATATATAAGATTTGGTATTGATGGACGAACTGATATTTTCCCCTTATATTTCAACTGATAAGCTTTGGCAAAGCTTGGGAATTCCTGCCTTGCTGCTGTACAGACATTCGATGCTGCAACTGAAAACATTGAAGCACTGAATGCCGCAGAGTTGAAATTCCAGGATATCATCAATTCTCCAACTTTAGATGCTGCTTGCAGAAAGATAGACAATTTGGCGGAGAAAAACCAACTTGATTCTGCATTAGTATTGATGATCACAAAAGCTTGGTCAGCTGCAAAGGAGTCGAGCATGATGAAAGATGAGGTAATGCGTTTGCTTGCTACCCTTGCGACCATTGATGCAAATGTGTGGTTGTATGGTCCTATTTCTATGGTCTAGTAGGTTGGCAAGGCATCATCCGACCATTCAAGAAAATTCAAATGATTGTGTTAAGTCAGTAATTACGGAAACTTCCAATAACACTTCAAATACCATTATCTGTTTGAATGAAATGAGTACAGCTTAGGGCATCAGAGTAAAAACAATACCAATTATTTCCCTCGAGTTTATGTGTTTCTATGTTGGGTCATGCGAGCAAATGGAGAATGTACCTCTAATTGATGTGCTATTGTTGCGTAATGACTTTCTGATGGTGTAAGCGTCGGTGTTGTTATCTCTTTGTTAAGCGTTGGTGTTGTTTTCTCTTTGTTAGGTGAAAGACATACTATACCACTTGTACGTGACTGCAAGTGGTAACCTTCAAAGATTAATGCCAAAAGAAATCAGGATTCTAAAGTATCTTCTCACAATTAAGGATCCTGAGGAAAAGCTAAGTGCTCTGAAGGATGCATTCACCCCCGGAGAAGAACTTGAAGGACAAGATGTGGACTGCTTATACACGTATGCTTTCGAACCTTATTGATATATTGAAATACTAATATGCCATAGTCTATTAGCTTGAACCAAAATTAGTGATTTAGTATGATCTCAGATCTTCTGTGTTCAAACTCTTCTGGTTCTATTTTCTATAATGTTGATAGTCTACTTGTTCAATACTCAATATTGAGCCAATTTTTGAGCCTACAAATGGGATGTTAAGTATATATTCAAAGAATTAGATATACGTTTAGATATAACCGAACTTATTAGCGGTGAGTTAGCACTCATTGTCGTCATGCCTTCTCATCAAACAAGAAAGAAAGCCTTGGTCCCGTCAGATCTCTCGAACCTTCAATGTCCATCTAGTTAAGAGTATGGATATCACCCTGACTTTACATTTGCGCAAAGCATACCACAATTACTTGAATGTTGTATGGAAAATGACCTTTAATTAATAATATTGCTTTGTCTGTTGTGCTCTATTCTTGGTATATTTTTTTTAACATCCGTGAATGTTCGGGTTAGCTCACGTGCACTTCGACTTATCTCATGAGACAACCTGCTTGACCCTAAAACATTTGGTTGCCAAGGGAACTCGTAGGATATTAATTCTTGGATAGGTGGCCATCATGGATTAAACTAGTGACATTTTAACTATTTATTGAGATTATGTCTCCTATTGTACCACTAGGTTAATACAGGATGGTTTATACTTGGTATCACTTTAGGCTTCTCCTTCTTTTTTAAAAAAAGATAATCTTATTAGGTTCTTTTTCTACTTCCCACTTTTAGGACACCAGAGAAGCTTCATACATGGATAAAGACAGTGGTAGATGCTTATCATTTCAGCCGGGAAGGCACTCTCATTAAAGAAGCCAGAGACCTTATGAATCCACAGGTCATTGTTAAACTTGAGGAATTGAAGCATCTCCTTGAGAAAAAATTCATGTGAGGTAAAGGATTTGGTCGTTAGGTTTTAATATATGTCTTGAGTTATGCATGAAAAGTTGTATAGTGAATTTTTGTGTTTTGTTGTAATACAAAATGAATATGAATAATGTATTCAAAATAGTTTATTTTCTCCACGGAAGTAGAGTGTAGTTCAAGTGGTGTTTTACTACGGCTTGTAGTTTCATGTTAGAATCTGTTTTCTCTTATTTTTCAATTTAC AAGTTGAGCAGTTTATACCCTTTAAACCCTAGCAAAGTTCCACTGGCTGGTCAGAGGGGGAAGTGAAGGTTTGTTTCGGTTCAATTCTACATTCTGCTTCCACATTGAGAATGGAACTCCATTGCTCAACTCTCCAGACCTCATTATCCTTCTCTGTCAGAGGAAAAGTTCTTGCTCATGGAGACGCCTCTGCGGCCTGCTCTCCCTCCTCGTCTTCGTTTTCAAGAATTACAGCTCGAAACTTCTCTTTGGGTCCAAAAAGTAGAGTTCGTGTTTCAAGCTTCATATTGACTTTAGCTTACCAGTCACAAAGTGAAGGGTTCCCTTCACTGGTATGTCGAGTTAGACTGAAGAACTCATCCTTTTCTGCCGTTGTCAGAGGGGAGAGTGCAGTACCTAGTGATTGTAATTCAGAAACTCTTGATTCGTCGAATCCCAATCCCAATGAGCTGGTAAGAGATGTTCAAAATGCAAAAGACAGTGTTGAAAGCTTGGACCAGCATAAAATGACCAAAGTGTGTGATAAGCTCATTGAAGTCTTCATGATCGACAAGCCAACCCCAACAGATTGGAGACGGTTAATCGCTTTCAGCAAGGAATGGGACAATATCCGTCCCCATTTCTTTAGGAGGTGCCAAGATCGAGCTGTCTCGGAAGATGATCCTGGGATGAGGCATAAGCTACTCAAGCTTGGAAGAAAGTTGAAAGAGATTGATGAAGATGTGCAGAGACACAATGAACTTCTTGAAGTGGTCAGAGCAGTGGCACCATCAGAACTTGGTGAAATTATTTCTAGGCGTCGCAAAGATTTTACAAAAGAATTCTTTGTACATCTTCACACGGTGGCTGAATCTTATTATGATGATCCGGCTGAGCAAAATGCTTTGGCAAAGCTTGGGAATTCCTGCCTTGCTGCTGTACAGACATTCGATGCTGCAACTGAAAACATTGAAGCACTGAATGCCGCAGAGTTGAAATTCCAGGATATCATCAATTCTCCAACTTTAGATGCTGCTTGCAGAAAGATAGACAATTTGGCGGAGAAAAACCAACTTGATTCTGCATTAGTATTGATGATCACAAAAGCTTGGTCAGCTGCAAAGGAGTCGAGCATGATGAAAGATGAGGTGAAAGACATACTATACCACTTGTACGTGACTGCAAGTGGTAACCTTCAAAGATTAATGCCAAAAGAAATCAGGATTCTAAAGTATCTTCTCACAATTAAGGATCCTGAGGAAAAGCTAAGTGCTCTGAAGGATGCATTCACCCCCGGAGAAGAACTTGAAGGACAAGATGTGGACTGCTTATACACGACACCAGAGAAGCTTCATACATGGATAAAGACAGTGGTAGATGCTTATCATTTCAGCCGGGAAGGCACTCTCATTAAAGAAGCCAGAGACCTTATGAATCCACAGGTCATTGTTAAACTTGAGGAATTGAAGCATCTCCTTGAGAAAAAATTCATGTGAGGTAAAGGATTTGGTCGTTAGGTTTTAATATATGTCTTGAGTTATGCATGAAAAGTTGTATAGTGAATTTTTGTGTTTTGTTGTAATACAAAATGAATATGAATAATGTATTCAAAATAGTTTATTTTCTCCACGGAAGTAGAGTGTAGTTCAAGTGGTGTTTTACTACGGCTTGTAGTTTCATGTTAGAATCTGTTTTCTCTTATTTTTCAATTTAC ATGGAACTCCATTGCTCAACTCTCCAGACCTCATTATCCTTCTCTGTCAGAGGAAAAGTTCTTGCTCATGGAGACGCCTCTGCGGCCTGCTCTCCCTCCTCGTCTTCGTTTTCAAGAATTACAGCTCGAAACTTCTCTTTGGGTCCAAAAAGTAGAGTTCGTGTTTCAAGCTTCATATTGACTTTAGCTTACCAGTCACAAAGTGAAGGGTTCCCTTCACTGGTATGTCGAGTTAGACTGAAGAACTCATCCTTTTCTGCCGTTGTCAGAGGGGAGAGTGCAGTACCTAGTGATTGTAATTCAGAAACTCTTGATTCGTCGAATCCCAATCCCAATGAGCTGGTAAGAGATGTTCAAAATGCAAAAGACAGTGTTGAAAGCTTGGACCAGCATAAAATGACCAAAGTGTGTGATAAGCTCATTGAAGTCTTCATGATCGACAAGCCAACCCCAACAGATTGGAGACGGTTAATCGCTTTCAGCAAGGAATGGGACAATATCCGTCCCCATTTCTTTAGGAGGTGCCAAGATCGAGCTGTCTCGGAAGATGATCCTGGGATGAGGCATAAGCTACTCAAGCTTGGAAGAAAGTTGAAAGAGATTGATGAAGATGTGCAGAGACACAATGAACTTCTTGAAGTGGTCAGAGCAGTGGCACCATCAGAACTTGGTGAAATTATTTCTAGGCGTCGCAAAGATTTTACAAAAGAATTCTTTGTACATCTTCACACGGTGGCTGAATCTTATTATGATGATCCGGCTGAGCAAAATGCTTTGGCAAAGCTTGGGAATTCCTGCCTTGCTGCTGTACAGACATTCGATGCTGCAACTGAAAACATTGAAGCACTGAATGCCGCAGAGTTGAAATTCCAGGATATCATCAATTCTCCAACTTTAGATGCTGCTTGCAGAAAGATAGACAATTTGGCGGAGAAAAACCAACTTGATTCTGCATTAGTATTGATGATCACAAAAGCTTGGTCAGCTGCAAAGGAGTCGAGCATGATGAAAGATGAGGTGAAAGACATACTATACCACTTGTACGTGACTGCAAGTGGTAACCTTCAAAGATTAATGCCAAAAGAAATCAGGATTCTAAAGTATCTTCTCACAATTAAGGATCCTGAGGAAAAGCTAAGTGCTCTGAAGGATGCATTCACCCCCGGAGAAGAACTTGAAGGACAAGATGTGGACTGCTTATACACGACACCAGAGAAGCTTCATACATGGATAAAGACAGTGGTAGATGCTTATCATTTCAGCCGGGAAGGCACTCTCATTAAAGAAGCCAGAGACCTTATGAATCCACAGGTCATTGTTAAACTTGAGGAATTGAAGCATCTCCTTGAGAAAAAATTCATGTGA MELHCSTLQTSLSFSVRGKVLAHGDASAACSPSSSSFSRITARNFSLGPKSRVRVSSFILTLAYQSQSEGFPSLVCRVRLKNSSFSAVVRGESAVPSDCNSETLDSSNPNPNELVRDVQNAKDSVESLDQHKMTKVCDKLIEVFMIDKPTPTDWRRLIAFSKEWDNIRPHFFRRCQDRAVSEDDPGMRHKLLKLGRKLKEIDEDVQRHNELLEVVRAVAPSELGEIISRRRKDFTKEFFVHLHTVAESYYDDPAEQNALAKLGNSCLAAVQTFDAATENIEALNAAELKFQDIINSPTLDAACRKIDNLAEKNQLDSALVLMITKAWSAAKESSMMKDEVKDILYHLYVTASGNLQRLMPKEIRILKYLLTIKDPEEKLSALKDAFTPGEELEGQDVDCLYTTPEKLHTWIKTVVDAYHFSREGTLIKEARDLMNPQVIVKLEELKHLLEKKFM Homology
BLAST of Clc11G09530 vs. NCBI nr
Match: XP_038884058.1 (uncharacterized protein At4g37920 isoform X1 [Benincasa hispida]) HSP 1 Score: 792.3 bits (2045), Expect = 2.1e-225 Identity = 410/454 (90.31%), Postives = 418/454 (92.07%), Query Frame = 0
BLAST of Clc11G09530 vs. NCBI nr
Match: XP_038884061.1 (uncharacterized protein At4g37920 isoform X2 [Benincasa hispida]) HSP 1 Score: 791.6 bits (2043), Expect = 3.6e-225 Identity = 410/454 (90.31%), Postives = 418/454 (92.07%), Query Frame = 0
BLAST of Clc11G09530 vs. NCBI nr
Match: XP_008441242.1 (PREDICTED: uncharacterized protein At4g37920, chloroplastic isoform X1 [Cucumis melo]) HSP 1 Score: 784.6 bits (2025), Expect = 4.5e-223 Identity = 405/454 (89.21%), Postives = 416/454 (91.63%), Query Frame = 0
BLAST of Clc11G09530 vs. NCBI nr
Match: XP_008441243.1 (PREDICTED: uncharacterized protein At4g37920, chloroplastic isoform X2 [Cucumis melo]) HSP 1 Score: 784.3 bits (2024), Expect = 5.8e-223 Identity = 405/454 (89.21%), Postives = 416/454 (91.63%), Query Frame = 0
BLAST of Clc11G09530 vs. NCBI nr
Match: XP_011649916.1 (uncharacterized protein At4g37920 isoform X1 [Cucumis sativus]) HSP 1 Score: 755.0 bits (1948), Expect = 3.8e-214 Identity = 386/454 (85.02%), Postives = 406/454 (89.43%), Query Frame = 0
BLAST of Clc11G09530 vs. ExPASy Swiss-Prot
Match: Q84WN0 (Uncharacterized protein At4g37920 OS=Arabidopsis thaliana OX=3702 GN=At4g37920 PE=2 SV=2) HSP 1 Score: 295.0 bits (754), Expect = 1.4e-78 Identity = 148/374 (39.57%), Postives = 249/374 (66.58%), Query Frame = 0
BLAST of Clc11G09530 vs. ExPASy TrEMBL
Match: A0A1S3B2I9 (uncharacterized protein At4g37920, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485431 PE=4 SV=1) HSP 1 Score: 784.6 bits (2025), Expect = 2.2e-223 Identity = 405/454 (89.21%), Postives = 416/454 (91.63%), Query Frame = 0
BLAST of Clc11G09530 vs. ExPASy TrEMBL
Match: A0A1S3B306 (uncharacterized protein At4g37920, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485431 PE=4 SV=1) HSP 1 Score: 784.3 bits (2024), Expect = 2.8e-223 Identity = 405/454 (89.21%), Postives = 416/454 (91.63%), Query Frame = 0
BLAST of Clc11G09530 vs. ExPASy TrEMBL
Match: A0A0A0LMH6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G403700 PE=4 SV=1) HSP 1 Score: 754.6 bits (1947), Expect = 2.4e-214 Identity = 386/454 (85.02%), Postives = 406/454 (89.43%), Query Frame = 0
BLAST of Clc11G09530 vs. ExPASy TrEMBL
Match: A0A6J1JWA0 (uncharacterized protein At4g37920-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489439 PE=4 SV=1) HSP 1 Score: 753.8 bits (1945), Expect = 4.1e-214 Identity = 388/454 (85.46%), Postives = 408/454 (89.87%), Query Frame = 0
BLAST of Clc11G09530 vs. ExPASy TrEMBL
Match: A0A6J1JSR8 (uncharacterized protein At4g37920-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489439 PE=4 SV=1) HSP 1 Score: 753.4 bits (1944), Expect = 5.3e-214 Identity = 388/454 (85.46%), Postives = 408/454 (89.87%), Query Frame = 0
BLAST of Clc11G09530 vs. TAIR 10
Match: AT1G36320.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37920.1); Has 93 Blast hits to 90 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). ) HSP 1 Score: 515.4 bits (1326), Expect = 4.7e-146 Identity = 246/338 (72.78%), Postives = 302/338 (89.35%), Query Frame = 0
BLAST of Clc11G09530 vs. TAIR 10
Match: AT4G37920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36320.1); Has 123 Blast hits to 120 proteins in 40 species: Archae - 2; Bacteria - 11; Metazoa - 8; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). ) HSP 1 Score: 295.0 bits (754), Expect = 1.0e-79 Identity = 148/374 (39.57%), Postives = 249/374 (66.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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