Clc11G09350 (gene) Watermelon (cordophanus) v2

Overview
NameClc11G09350
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionRetrotransposon protein, putative, Ty1-copia subclass
LocationClcChr11: 12016513 .. 12020105 (+)
RNA-Seq ExpressionClc11G09350
SyntenyClc11G09350
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGATCTAGGAGCTCTTAAATATTTTATGGGGCTTGAAGTTATCAAGACTAATGCTGGTATTTCTGTGACTCAAACTAAGTATGCTAAAGACATCTTACATCGTTTTGGTATGAGCGACTACAAACCATGTAATACTCCTATTGCAATCAACTCTTTCAATGATGTTTCTAACTCGGTTTGTTCTCCTGAGGATGTTAAGGCCTATAGAGAAATTGTTGGAGCACTCCATTATATTACTTTCACAAGAGCGGATATTGCATTTTCTGTAAGTAAATTGTCTCAATTCATGCACTGCACTGCCCTGCTCATTCTCATCTCACAGCTGCTAAAAGAGTATTAAGTTATATTAACGACACTATTTCCAAAGGGATATTGTTTTAGAAATCTGCTAAACCCCTTCATTTGAATGCCTTTTCTAACTCTGATTGGGCTGGTAATGCTTTTTATAAAAGATCTACTACAGGATTTGTTATTTTCTTCGGTAATAATCCGGTTCATGGGCTGCTAAAAAGCAAACTACAGTTTCTTGTAGTTCTACTGAAGCTGAATACAGAGCATTAGCTACTACTGTAGTAGAATTATTTTGGATTCGCCAGCTTCTTTGTGATCTTTCGGTGTTTAGAAAAATTCCTCCTTACTTGTGGTGTGATAAACAATCAGCAATTCAACTTGCTCATAATCCTATCTTTCATGCTTGAACAAAACATATTGAAGTTGATTTTCATTTCAAACGTGAGAAAGTTGTTCGTAATGACATTCATCTTCAACATGTATCTATTGTTGCTCAACTTGCTGACATCTTCACCAAAGCACTTACTGCTGATAGATTTTATTTGTTGAGATCCAAACTCATGTCTTAGCTCTAGTGGCATTAGTTTGAGGGAGGATATTATAATGTATCAGTTTAGTAAATCAGAAATTAGTTTTATCTTTCTATTTGTTTGTTTTGAAGTCTACCGTAAGTGTGAGTTAGTATAAATACTCACTCTCATGTATTTTCTAAATTAATAAGGAAAGTAAATCTTTTACATAGATTTGTGAAACTTATCACATTTAACATATACCATCAACATCAAAATTGAATGAATCGGATGAAAACAACTCTATATCAAAACAAAACAAAAATAAAAATAATATTTACCATAATCGAGCAAACAACATTAACCATAACACAATTAAAATCATGTAATATTAGCTGTATAAATGATATTATTTAAATAAAATATATCAATTGATTAATATACCAAATATAAAGTATATCAGTTGACTGATATATCAAAATATAAACTATATCAGATACACTTGCTGATGCACAAATGAGGGCAAAATCGTAATAATAAGAAAACCAAAAATCAGGTTCCAATTTTTTGTTATATCTACAATTTTAAGAAACCATTGTTGTGTTTGCAAATACCCTTATATTTTCTGCTACCCATTGCAATTTCCCTTATATGCATTAGTTTATCATATAATCACTAGTAGAATGTTTGTCGTTGCCCACACACAAAAATGTCAATAGATCTTAAAAAATGAGTGGGCAAAGCTTCTGGCGGCGTTTGTTTGCATGGGCAGACAACGTCGACGGAAGGCCGTGGGCAAATCATCTGCCCACATTTTTTGACATTTCGTAGGCAGAAATGCCCATGCAATGAAACTCGTGGGTAGAAATAGTCTTTTTGCTCACGTTACAAATGTCGGTAGAAGTTGATTTCTGGCCACGCATCAACATTCATGGGCAAAAATGACATTTCTTCCCACGTTTTATGCATGTTTAGAAATCAATTTCTGCCGACGTTTTACTTTCCATTAGCATAACTCGGTTTCTTCCCATGCATGATACGTCGGTATATAGTGTTTTATGCCTACACATAAGTAAACGTGGCCAAAAGATTCATTTTTTTTCACGCACGAAACGTCGCCATAGCTTTATAACTACCAACGCGTTTATTATTATTATATTATATGCTTGGGGATCAATATTCAAAATAAAAATAATTTCAATTTTTTGTAACAAAATATGTTTAACATCATAACAATAAGTTTAGCCAATTTCCTTTAACAAAATAGGTTTAACATCATAACAACCCCCAATTCCTTAACCATATAAAATATGAAAAAATATTTTTAGTGTTTGTTTCCTAAGTTATTAGCTATGCAAAATGAACAATAATATTAAATACACAAAAAAATGGCTCAATTAGTTGGTATTCACAAAAAAATGTTTCCTTTCATCAATTGGGTCTTCACAAAAAAATAATGTCTGGCCTTCTTCAAAATATATATACCTGAAAAGCATAATATTCAAGTCCAATTAAGCACAACATAATCAAAACTAATAAAGCAAATTAATTTGCATGACTTTGAAAACAAATCCAAAATGCATAAGTATGATCTTTTAACTCAAAACGAATCAAAAAGTGCCTAAAAAGTGTCTAAATGACATCCAAAATGAATAAGTATGACCTCTTAACTCAAAACCAACCAAAAAGTGCCTAAAAAGTGTCTAAATGACACTTTAACTCCAAAAACAAATCCAAAATGCTGAAAACGAACGATCGACAAAGCAGTACATTGATGAACAAAGGCTACGATTACCCACATTGACTTCTCCGTTGGACATCGTCCTATATTGCTAGTTGCCAACGTTGTTTCCTTTTGATAGATGTTGCACATAAAATTTAACATTGTCCTATATTGCTAGTCGCCAACGTTGTTTCCTTTTGATAGATGTTGCACGTAAAATTTGACATGATATTATACAACAGGAAAGAAGATGAAGATGAGTGGAAAATTATACATATCATACACTAAGGGAGCATTTGGTCTATTGGGTGGAATTAATAAAAAATTTGGATGTGTTGATGCTAATGGCAGCGGACGATAGAGGCTATTGGTATAAGGCAAACTAGGAATTTATTTTGAGAAGTTTTAATTGTTTTTTTTTTATTATTTCTAAATTGTCCATAATATTTAAAAGCAAATAATTAGTAATCAAATCCCAACAAAATCTATTTTGGAGGAGATATACTAAATTTGTTTGGATATATACCCTATACATAATTGAAGCAAGCGTTGGGATTAATAGGGCAAAATTGGAAAAATCAAATAGGAAAATGAGTACTCTACGTTATGTTTTGACCATAAATTAGAGAATTAAGAAAACGGCCATTTTTTCAATGGGGTGTTCCATTTTGGTCATTCTACACAATTTCTCTAATATCTAAATATCTCTTATATTAGTGAGCCTCATGTTTGGTTTGCATATGTCCCATTTGCTTTTAGTCGTGGACTCATGCACTGTATTCTAACATTGGGCCTGGGCTTGATGTTTTATTTATTTATTTATGGCTATCGGTAATTTGAAGGTCAGCTAGTAGAGAATAAGATAAACCGGAAACTCCTAGAACACTAGACATTTTTCATATTTAGAAAAATAATAAAATAAAAAATTGAAAATGATTATTTTTCACTTTCGAAGGCCAACGACGATATTCCACCAATCCACAGGCGGACGGACGCCGGGATGCTGGAACCGCCTTACTCGTAAACTCAGAGACTCTTCAGAACTTCCGAGAAGAAGATCCCTAA

mRNA sequence

ATGACTGATCTAGGAGCTCTTAAATATTTTATGGGGCTTGAAGTTATCAAGACTAATGCTGGTATTTCTGTGACTCAAACTAAGTATGCTAAAGACATCTTACATCGTTTTGGTATGAGCGACTACAAACCATGTAATACTCCTATTGCAATCAACTCTTTCAATGATGTTTCTAACTCGGTTTGTTCTCCTGAGGATGTTAAGGCCTATAGAGAAATTGTTGGAGCACTCCATTATATTACTTTCACAAGAGCGGATATTGCATTTTCTGCGGACGGACGCCGGGATGCTGGAACCGCCTTACTCGTAAACTCAGAGACTCTTCAGAACTTCCGAGAAGAAGATCCCTAA

Coding sequence (CDS)

ATGACTGATCTAGGAGCTCTTAAATATTTTATGGGGCTTGAAGTTATCAAGACTAATGCTGGTATTTCTGTGACTCAAACTAAGTATGCTAAAGACATCTTACATCGTTTTGGTATGAGCGACTACAAACCATGTAATACTCCTATTGCAATCAACTCTTTCAATGATGTTTCTAACTCGGTTTGTTCTCCTGAGGATGTTAAGGCCTATAGAGAAATTGTTGGAGCACTCCATTATATTACTTTCACAAGAGCGGATATTGCATTTTCTGCGGACGGACGCCGGGATGCTGGAACCGCCTTACTCGTAAACTCAGAGACTCTTCAGAACTTCCGAGAAGAAGATCCCTAA

Protein sequence

MTDLGALKYFMGLEVIKTNAGISVTQTKYAKDILHRFGMSDYKPCNTPIAINSFNDVSNSVCSPEDVKAYREIVGALHYITFTRADIAFSADGRRDAGTALLVNSETLQNFREEDP
Homology
[Close]
BLAST of Clc11G09350 vs. NCBI nr
Match: XP_022139699.1 (uncharacterized protein LOC111010547 [Momordica charantia])

HSP 1 Score: 113.6 bits (283), Expect = 1.1e-21
Identity = 49/90 (54.44%), Postives = 68/90 (75.56%), Query Frame = 0 

Query: 1  MTDLGALKYFMGLEVIKTNAGISVTQTKYAKDILHRFGMSDYKPCNTPIAINSFNDVSNS 60
          MTDLGALKYF+GLE+  TN G+ + + KY +D+L RFGM   KPC TP++++S  D+  S
Sbjct: 1  MTDLGALKYFLGLEISYTNNGLFINEAKYTRDVLQRFGMLSAKPCTTPMSLSSTTDIGAS 60

Query: 61 VCSPEDVKAYREIVGALHYITFTRADIAFS 91
           CS ED++ YR ++G+LHY+TFTR DI F+
Sbjct: 61 -CSAEDIRNYRSLIGSLHYLTFTRPDITFA 89

[Close]
BLAST of Clc11G09350 vs. NCBI nr
Match: XP_022143489.1 (uncharacterized protein LOC111013365 [Momordica charantia])

HSP 1 Score: 110.2 bits (274), Expect = 1.2e-20
Identity = 48/90 (53.33%), Postives = 69/90 (76.67%), Query Frame = 0 

Query: 1   MTDLGALKYFMGLEVIKTNAGISVTQTKYAKDILHRFGMSDYKPCNTPIAINSFNDVSNS 60
           MTDL  LKYF+GLE+  TN G+S++Q KY +D+L RFG+   KPC TP++++S  D+  +
Sbjct: 129 MTDLEDLKYFLGLEISYTNNGLSISQAKYTRDVLQRFGILSAKPCTTPMSLSSTTDI-GA 188

Query: 61  VCSPEDVKAYREIVGALHYITFTRADIAFS 91
            CS ED++ YR ++G+LHY+TFTR DIAF+
Sbjct: 189 PCSIEDIRNYRSLIGSLHYLTFTRPDIAFA 217

[Close]
BLAST of Clc11G09350 vs. NCBI nr
Match: XP_022151604.1 (uncharacterized protein LOC111019517 [Momordica charantia])

HSP 1 Score: 109.0 bits (271), Expect = 2.8e-20
Identity = 51/90 (56.67%), Postives = 71/90 (78.89%), Query Frame = 0 

Query: 1   MTDLGALKYFMGLEVIKTNAGISVTQTKYAKDILHRFGMSDYKPCNTPIAINSFNDVSNS 60
           MTDLG L++F+GLE+  ++ GISV Q+KY KD+L RFGM   KPC+TPIA++S +  ++S
Sbjct: 97  MTDLGPLRFFLGLEIAYSSHGISVHQSKYTKDVLTRFGMLSAKPCSTPIALSSAH--TSS 156

Query: 61  VCSPEDVKAYREIVGALHYITFTRADIAFS 91
           +CS  D K YR +VGALHY+TF+R +IAF+
Sbjct: 157 LCSDADAKNYRSLVGALHYLTFSRPNIAFA 184

[Close]
BLAST of Clc11G09350 vs. NCBI nr
Match: XP_022157475.1 (uncharacterized protein LOC111024167 [Momordica charantia])

HSP 1 Score: 105.5 bits (262), Expect = 3.1e-19
Identity = 49/90 (54.44%), Postives = 67/90 (74.44%), Query Frame = 0 

Query: 1  MTDLGALKYFMGLEVIKTNAGISVTQTKYAKDILHRFGMSDYKPCNTPIAINSFNDVSNS 60
          MTD+ +LKYF+GLE+  T  G+ V Q+KY KD+LHRFGM+  K C+TP+A+ S  D S  
Sbjct: 1  MTDMESLKYFLGLEISSTVNGLFVHQSKYTKDVLHRFGMTSAKSCSTPLALVSSTD-SRI 60

Query: 61 VCSPEDVKAYREIVGALHYITFTRADIAFS 91
          +CS +D + YR + GALHY+TF+R DIAF+
Sbjct: 61 LCSTDDSRNYRALTGALHYLTFSRLDIAFA 89

[Close]
BLAST of Clc11G09350 vs. NCBI nr
Match: XP_022152156.1 (uncharacterized protein LOC111019945 [Momordica charantia])

HSP 1 Score: 104.0 bits (258), Expect = 9.0e-19
Identity = 49/90 (54.44%), Postives = 65/90 (72.22%), Query Frame = 0 

Query: 1   MTDLGALKYFMGLEVIKTNAGISVTQTKYAKDILHRFGMSDYKPCNTPIAINSFNDVSNS 60
           MTDLG L YF+GLE+  T+ GI V Q KY +DIL RFGM   KPC+TP+A+ + +D+   
Sbjct: 121 MTDLGNLHYFLGLEITYTSGGILVNQAKYTRDILKRFGMLSAKPCSTPLALVNSSDLGEP 180

Query: 61  VCSPEDVKAYREIVGALHYITFTRADIAFS 91
            CS ED + YR ++GA +Y+TF+R DIAFS
Sbjct: 181 -CSTEDARNYRSLIGAPNYLTFSRPDIAFS 209

[Close]
BLAST of Clc11G09350 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 4.5e-13
Identity = 37/92 (40.22%), Postives = 59/92 (64.13%), Query Frame = 0 

Query: 1   MTDLGALKYFMGLEVIKTNAGISVTQTKYAKDILHRFGMSDYKPCNTPIAINSFNDVSNS 60
           M DLG + YF+G+++    +G+ ++QTKYA+ IL+  GM D KP +TP+ +   + VS +
Sbjct: 33  MKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTA 92

Query: 61  VCSPEDVKAYREIVGALHYITFTRADIAFSAD 93
                D   +R IVGAL Y+T TR DI+++ +
Sbjct: 93  --KYPDPSDFRSIVGALQYLTLTRPDISYAVN 122

[Close]
BLAST of Clc11G09350 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 5.7e-08
Identity = 30/86 (34.88%), Postives = 49/86 (56.98%), Query Frame = 0 

Query: 7    LKYFMGLEVIKTNAGISVTQTKYAKDILHRFGMSDYKPCNTPIAINSFNDVSNSVCSPED 66
            L YF+G+E  +   G+ ++Q +Y  D+L R  M   KP  TP+A +    + +    P D
Sbjct: 1166 LHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLP-D 1225

Query: 67   VKAYREIVGALHYITFTRADIAFSAD 93
               YR IVG+L Y+ FTR D++++ +
Sbjct: 1226 PTEYRGIVGSLQYLAFTRPDLSYAVN 1250

[Close]
BLAST of Clc11G09350 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.3e-07
Identity = 30/86 (34.88%), Postives = 48/86 (55.81%), Query Frame = 0 

Query: 7    LKYFMGLEVIKTNAGISVTQTKYAKDILHRFGMSDYKPCNTPIAINSFNDVSNSVCSPED 66
            L YF+G+E  +   G+ ++Q +Y  D+L R  M   KP  TP+A +    + +      D
Sbjct: 1183 LHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGT-KLTD 1242

Query: 67   VKAYREIVGALHYITFTRADIAFSAD 93
               YR IVG+L Y+ FTR DI+++ +
Sbjct: 1243 PTEYRGIVGSLQYLAFTRPDISYAVN 1267

[Close]
BLAST of Clc11G09350 vs. ExPASy TrEMBL
Match: A0A6J1CDR7 (uncharacterized protein LOC111010547 OS=Momordica charantia OX=3673 GN=LOC111010547 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 5.5e-22
Identity = 49/90 (54.44%), Postives = 68/90 (75.56%), Query Frame = 0 

Query: 1  MTDLGALKYFMGLEVIKTNAGISVTQTKYAKDILHRFGMSDYKPCNTPIAINSFNDVSNS 60
          MTDLGALKYF+GLE+  TN G+ + + KY +D+L RFGM   KPC TP++++S  D+  S
Sbjct: 1  MTDLGALKYFLGLEISYTNNGLFINEAKYTRDVLQRFGMLSAKPCTTPMSLSSTTDIGAS 60

Query: 61 VCSPEDVKAYREIVGALHYITFTRADIAFS 91
           CS ED++ YR ++G+LHY+TFTR DI F+
Sbjct: 61 -CSAEDIRNYRSLIGSLHYLTFTRPDITFA 89

[Close]
BLAST of Clc11G09350 vs. ExPASy TrEMBL
Match: A0A6J1CPG5 (uncharacterized protein LOC111013365 OS=Momordica charantia OX=3673 GN=LOC111013365 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 6.0e-21
Identity = 48/90 (53.33%), Postives = 69/90 (76.67%), Query Frame = 0 

Query: 1   MTDLGALKYFMGLEVIKTNAGISVTQTKYAKDILHRFGMSDYKPCNTPIAINSFNDVSNS 60
           MTDL  LKYF+GLE+  TN G+S++Q KY +D+L RFG+   KPC TP++++S  D+  +
Sbjct: 129 MTDLEDLKYFLGLEISYTNNGLSISQAKYTRDVLQRFGILSAKPCTTPMSLSSTTDI-GA 188

Query: 61  VCSPEDVKAYREIVGALHYITFTRADIAFS 91
            CS ED++ YR ++G+LHY+TFTR DIAF+
Sbjct: 189 PCSIEDIRNYRSLIGSLHYLTFTRPDIAFA 217

[Close]
BLAST of Clc11G09350 vs. ExPASy TrEMBL
Match: A0A6J1DDJ2 (uncharacterized protein LOC111019517 OS=Momordica charantia OX=3673 GN=LOC111019517 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.3e-20
Identity = 51/90 (56.67%), Postives = 71/90 (78.89%), Query Frame = 0 

Query: 1   MTDLGALKYFMGLEVIKTNAGISVTQTKYAKDILHRFGMSDYKPCNTPIAINSFNDVSNS 60
           MTDLG L++F+GLE+  ++ GISV Q+KY KD+L RFGM   KPC+TPIA++S +  ++S
Sbjct: 97  MTDLGPLRFFLGLEIAYSSHGISVHQSKYTKDVLTRFGMLSAKPCSTPIALSSAH--TSS 156

Query: 61  VCSPEDVKAYREIVGALHYITFTRADIAFS 91
           +CS  D K YR +VGALHY+TF+R +IAF+
Sbjct: 157 LCSDADAKNYRSLVGALHYLTFSRPNIAFA 184

[Close]
BLAST of Clc11G09350 vs. ExPASy TrEMBL
Match: A0A6J1DT77 (uncharacterized protein LOC111024167 OS=Momordica charantia OX=3673 GN=LOC111024167 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.5e-19
Identity = 49/90 (54.44%), Postives = 67/90 (74.44%), Query Frame = 0 

Query: 1  MTDLGALKYFMGLEVIKTNAGISVTQTKYAKDILHRFGMSDYKPCNTPIAINSFNDVSNS 60
          MTD+ +LKYF+GLE+  T  G+ V Q+KY KD+LHRFGM+  K C+TP+A+ S  D S  
Sbjct: 1  MTDMESLKYFLGLEISSTVNGLFVHQSKYTKDVLHRFGMTSAKSCSTPLALVSSTD-SRI 60

Query: 61 VCSPEDVKAYREIVGALHYITFTRADIAFS 91
          +CS +D + YR + GALHY+TF+R DIAF+
Sbjct: 61 LCSTDDSRNYRALTGALHYLTFSRLDIAFA 89

[Close]
BLAST of Clc11G09350 vs. ExPASy TrEMBL
Match: A0A6J1DGS4 (uncharacterized protein LOC111019945 OS=Momordica charantia OX=3673 GN=LOC111019945 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 4.3e-19
Identity = 49/90 (54.44%), Postives = 65/90 (72.22%), Query Frame = 0 

Query: 1   MTDLGALKYFMGLEVIKTNAGISVTQTKYAKDILHRFGMSDYKPCNTPIAINSFNDVSNS 60
           MTDLG L YF+GLE+  T+ GI V Q KY +DIL RFGM   KPC+TP+A+ + +D+   
Sbjct: 121 MTDLGNLHYFLGLEITYTSGGILVNQAKYTRDILKRFGMLSAKPCSTPLALVNSSDLGEP 180

Query: 61  VCSPEDVKAYREIVGALHYITFTRADIAFS 91
            CS ED + YR ++GA +Y+TF+R DIAFS
Sbjct: 181 -CSTEDARNYRSLIGAPNYLTFSRPDIAFS 209

[Close]
BLAST of Clc11G09350 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 75.5 bits (184), Expect = 3.2e-14
Identity = 37/92 (40.22%), Postives = 59/92 (64.13%), Query Frame = 0 

Query: 1   MTDLGALKYFMGLEVIKTNAGISVTQTKYAKDILHRFGMSDYKPCNTPIAINSFNDVSNS 60
           M DLG + YF+G+++    +G+ ++QTKYA+ IL+  GM D KP +TP+ +   + VS +
Sbjct: 33  MKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTA 92

Query: 61  VCSPEDVKAYREIVGALHYITFTRADIAFSAD 93
                D   +R IVGAL Y+T TR DI+++ +
Sbjct: 93  --KYPDPSDFRSIVGALQYLTLTRPDISYAVN 122

[Close]
BLAST of Clc11G09350 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 73.6 bits (179), Expect = 1.2e-13
Identity = 38/92 (41.30%), Postives = 57/92 (61.96%), Query Frame = 0 

Query: 1   MTDLGALKYFMGLEVIKTNAGISVTQTKYAKDILHRFGMSDYKPCNTPIAINSFNDVSNS 60
           + DLG LKYF+GLE+ ++ AGI++ Q KYA D+L   G+   KP + P+   S    ++S
Sbjct: 310 LRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMD-PSVTFSAHS 369

Query: 61  VCSPEDVKAYREIVGALHYITFTRADIAFSAD 93
                D KAYR ++G L Y+  TR DI+F+ +
Sbjct: 370 GGDFVDAKAYRRLIGRLMYLQITRLDISFAVN 400

The following BLAST results are available for this feature:
BLAST of Clc11G09350 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022139699.11.1e-2154.44uncharacterized protein LOC111010547 [Momordica charantia][more]
XP_022143489.11.2e-2053.33uncharacterized protein LOC111013365 [Momordica charantia][more]
XP_022151604.12.8e-2056.67uncharacterized protein LOC111019517 [Momordica charantia][more]
XP_022157475.13.1e-1954.44uncharacterized protein LOC111024167 [Momordica charantia][more]
XP_022152156.19.0e-1954.44uncharacterized protein LOC111019945 [Momordica charantia][more]
BLAST of Clc11G09350 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P925194.5e-1340.22Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... [more]
Q9ZT945.7e-0834.88Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Q94HW21.3e-0734.88Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
BLAST of Clc11G09350 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CDR75.5e-2254.44uncharacterized protein LOC111010547 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
A0A6J1CPG56.0e-2153.33uncharacterized protein LOC111013365 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
A0A6J1DDJ21.3e-2056.67uncharacterized protein LOC111019517 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
A0A6J1DT771.5e-1954.44uncharacterized protein LOC111024167 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A6J1DGS44.3e-1954.44uncharacterized protein LOC111019945 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
BLAST of Clc11G09350 vs. TAIR 10
Match NameE-valueIdentityDescription
ATMG00810.13.2e-1440.22DNA/RNA polymerases superfamily protein [more]
AT4G23160.11.2e-1341.30cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc11G09350.1Clc11G09350.1mRNA