
Clc11G09300 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATGAAGTACTTTTTAATGCAAAAAAGTGATGCCCACCAGCCCTTCAATGCATTTCCTTAAATTGGAGGAATGACAATTGACAAACCACTTTGCTTCATATGGCTGTAATTACTTCCATTTGTGATTGTGAACTAATCAAACCTCAAATCATGTTTTGAGTTGTAGTGCCATCCTTTTCCCAAACTCCTTTGTCAACTCCATGATTCAATGCAATAAAATGAAAACCCACCTCTCAATCTTTTTGCTTTATAAACTACCTCAAACCCCAACTTAATCAAAACTATTTCAACCAATTCCCATCTCTTCTTTCCCCAATATTCAATTCATGGAACCTCAAGAAAACTCCAGCTTCCAACCCATTAATGGCGGCTCCACCCCGATTACTGAATCACTTCCTCTCTGTAGCCTGGCGTTGAAATCAATTGACCATCATGAGAAAGAAGACCATGGCTATGAAAATGTCGATCGTTCTTCGGAAAAAAGAAGTAATGGAGTTCATAGAAAAACTAATTCTTGCTCGAGGGATAGAAGGATTAATGAGATAGCAATTGATAGCGATGCCGAAGAAGATGAGAAGATGGATATGCTGTGGGAAGATTTCAATGAAGAATTGCTGAAGAATTTGAGTTCCAGATTTGGGTCTCATAAGTTGCCGGAACTTGAAGACTTGGAGTCGGAAGAAGCAACGGACGGTGGCGGGGCATTGCTGTCGGCAAGGATGGCGGGTGTGGTAGTGATAATGAAGGTGCTGAAGAAGCTTCTTTTTCTGCATAGCTTTCGCAGGAAGCTCAAAGCTCGGACATGGTGATTGGAAATTAATGATTCAAGAAGTTTGGTCATTGCAGAGTAATGCTAATGTGTTCTGACATTTTGGGATGAAATAAAAATGGATTTGTTTGGTTAAGATTAGAGGAATGCCTTTTTTTCCAATTTCCATATATACATTTGTTAATAAGTTGTAAGAGGAAGTTATCTTAAATTTGCTCCTTGATATGTGTATCTTTCATCCAAGGCTTCAAGGTGATGTAAATATATCTTTTACTTGAACAAGATTAGTTCTATAGGTTGTACAACTGTTTGTTTGAGTTCTAAAGTTAAAATATTAAGATTTGTAGTAAAAGACTATACCACATAGAGATGAGAAATGAGTGAAGACGTGTACAATTTATTTTTTAGTACAACTACAGGGATGATAGATCAAAC CATGAAGTACTTTTTAATGCAAAAAAGTGATGCCCACCAGCCCTTCAATGCATTTCCTTAAATTGGAGGAATGACAATTGACAAACCACTTTGCTTCATATGGCTGTAATTACTTCCATTTGTGATTGTGAACTAATCAAACCTCAAATCATGTTTTGAGTTGTAGTGCCATCCTTTTCCCAAACTCCTTTGTCAACTCCATGATTCAATGCAATAAAATGAAAACCCACCTCTCAATCTTTTTGCTTTATAAACTACCTCAAACCCCAACTTAATCAAAACTATTTCAACCAATTCCCATCTCTTCTTTCCCCAATATTCAATTCATGGAACCTCAAGAAAACTCCAGCTTCCAACCCATTAATGGCGGCTCCACCCCGATTACTGAATCACTTCCTCTCTGTAGCCTGGCGTTGAAATCAATTGACCATCATGAGAAAGAAGACCATGGCTATGAAAATGTCGATCGTTCTTCGGAAAAAAGAAGTAATGGAGTTCATAGAAAAACTAATTCTTGCTCGAGGGATAGAAGGATTAATGAGATAGCAATTGATAGCGATGCCGAAGAAGATGAGAAGATGGATATGCTGTGGGAAGATTTCAATGAAGAATTGCTGAAGAATTTGAGTTCCAGATTTGGGTCTCATAAGTTGCCGGAACTTGAAGACTTGGAGTCGGAAGAAGCAACGGACGGTGGCGGGGCATTGCTGTCGGCAAGGATGGCGGGTGTGGTAGTGATAATGAAGGTGCTGAAGAAGCTTCTTTTTCTGCATAGCTTTCGCAGGAAGCTCAAAGCTCGGACATGGTGATTGGAAATTAATGATTCAAGAAGTTTGGTCATTGCAGAGTAATGCTAATGTGTTCTGACATTTTGGGATGAAATAAAAATGGATTTGTTTGGTTAAGATTAGAGGAATGCCTTTTTTTCCAATTTCCATATATACATTTGTTAATAAGTTGTAAGAGGAAGTTATCTTAAATTTGCTCCTTGATATGTGTATCTTTCATCCAAGGCTTCAAGGTGATGTAAATATATCTTTTACTTGAACAAGATTAGTTCTATAGGTTGTACAACTGTTTGTTTGAGTTCTAAAGTTAAAATATTAAGATTTGTAGTAAAAGACTATACCACATAGAGATGAGAAATGAGTGAAGACGTGTACAATTTATTTTTTAGTACAACTACAGGGATGATAGATCAAAC ATGGAACCTCAAGAAAACTCCAGCTTCCAACCCATTAATGGCGGCTCCACCCCGATTACTGAATCACTTCCTCTCTGTAGCCTGGCGTTGAAATCAATTGACCATCATGAGAAAGAAGACCATGGCTATGAAAATGTCGATCGTTCTTCGGAAAAAAGAAGTAATGGAGTTCATAGAAAAACTAATTCTTGCTCGAGGGATAGAAGGATTAATGAGATAGCAATTGATAGCGATGCCGAAGAAGATGAGAAGATGGATATGCTGTGGGAAGATTTCAATGAAGAATTGCTGAAGAATTTGAGTTCCAGATTTGGGTCTCATAAGTTGCCGGAACTTGAAGACTTGGAGTCGGAAGAAGCAACGGACGGTGGCGGGGCATTGCTGTCGGCAAGGATGGCGGGTGTGGTAGTGATAATGAAGGTGCTGAAGAAGCTTCTTTTTCTGCATAGCTTTCGCAGGAAGCTCAAAGCTCGGACATGGTGA MEPQENSSFQPINGGSTPITESLPLCSLALKSIDHHEKEDHGYENVDRSSEKRSNGVHRKTNSCSRDRRINEIAIDSDAEEDEKMDMLWEDFNEELLKNLSSRFGSHKLPELEDLESEEATDGGGALLSARMAGVVVIMKVLKKLLFLHSFRRKLKARTW Homology
BLAST of Clc11G09300 vs. NCBI nr
Match: XP_011650206.1 (uncharacterized protein LOC105434762 [Cucumis sativus] >KGN63099.1 hypothetical protein Csa_022432 [Cucumis sativus]) HSP 1 Score: 232.3 bits (591), Expect = 3.0e-57 Identity = 131/164 (79.88%), Postives = 139/164 (84.76%), Query Frame = 0
BLAST of Clc11G09300 vs. NCBI nr
Match: XP_008441623.1 (PREDICTED: uncharacterized protein LOC103485703 [Cucumis melo] >KAA0037012.1 uncharacterized protein E6C27_scaffold86G00980 [Cucumis melo var. makuwa] >TYK06638.1 uncharacterized protein E5676_scaffold453G001160 [Cucumis melo var. makuwa]) HSP 1 Score: 229.2 bits (583), Expect = 2.5e-56 Identity = 129/164 (78.66%), Postives = 136/164 (82.93%), Query Frame = 0
BLAST of Clc11G09300 vs. NCBI nr
Match: XP_022152473.1 (uncharacterized protein LOC111020194 [Momordica charantia]) HSP 1 Score: 177.2 bits (448), Expect = 1.1e-40 Identity = 110/164 (67.07%), Postives = 121/164 (73.78%), Query Frame = 0
BLAST of Clc11G09300 vs. NCBI nr
Match: XP_022939117.1 (uncharacterized protein LOC111445118 [Cucurbita moschata] >KAG6578325.1 hypothetical protein SDJN03_22773, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015903.1 hypothetical protein SDJN02_21006, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 170.2 bits (430), Expect = 1.4e-38 Identity = 107/166 (64.46%), Postives = 116/166 (69.88%), Query Frame = 0
BLAST of Clc11G09300 vs. NCBI nr
Match: XP_022993375.1 (uncharacterized protein LOC111489418 [Cucurbita maxima]) HSP 1 Score: 164.1 bits (414), Expect = 1.0e-36 Identity = 107/166 (64.46%), Postives = 115/166 (69.28%), Query Frame = 0
BLAST of Clc11G09300 vs. ExPASy TrEMBL
Match: A0A0A0LQ09 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G402070 PE=4 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 1.5e-57 Identity = 131/164 (79.88%), Postives = 139/164 (84.76%), Query Frame = 0
BLAST of Clc11G09300 vs. ExPASy TrEMBL
Match: A0A5D3C651 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001160 PE=4 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 1.2e-56 Identity = 129/164 (78.66%), Postives = 136/164 (82.93%), Query Frame = 0
BLAST of Clc11G09300 vs. ExPASy TrEMBL
Match: A0A1S3B3U6 (uncharacterized protein LOC103485703 OS=Cucumis melo OX=3656 GN=LOC103485703 PE=4 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 1.2e-56 Identity = 129/164 (78.66%), Postives = 136/164 (82.93%), Query Frame = 0
BLAST of Clc11G09300 vs. ExPASy TrEMBL
Match: A0A6J1DEY5 (uncharacterized protein LOC111020194 OS=Momordica charantia OX=3673 GN=LOC111020194 PE=4 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 5.6e-41 Identity = 110/164 (67.07%), Postives = 121/164 (73.78%), Query Frame = 0
BLAST of Clc11G09300 vs. ExPASy TrEMBL
Match: A0A6J1FFX5 (uncharacterized protein LOC111445118 OS=Cucurbita moschata OX=3662 GN=LOC111445118 PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 6.8e-39 Identity = 107/166 (64.46%), Postives = 116/166 (69.88%), Query Frame = 0
BLAST of Clc11G09300 vs. TAIR 10
Match: AT1G71910.1 (unknown protein; Has 28 Blast hits to 28 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 46.6 bits (109), Expect = 2.2e-05 Identity = 36/93 (38.71%), Postives = 48/93 (51.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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