Clc11G09090 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc11G09090
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Disease resistance protein (TIR-NBS class)
Location	ClcChr11: 11333153 .. 11334244 (+)
RNA-Seq Expression	Clc11G09090
Synteny	Clc11G09090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAGGAATCGACAATGGAAGAAGAAGGGAGAAAGAAGGGACCAAATCGAGAACGGAAGAAGAAGGGAGGAAGAAGAAGGGACGGAATCAAAGAGGTGAGCTTTTTTAATTGAATTTTTGTAGAAAAATTGAAAATGGGCTTGATGGGAGAAGAAGGGATGGAATTGAGAATGCGGTTTGAGTCAGAAAGAAAATGGGTCGGATGTCATTTTTAGTCTTTTCAGACATTTGGGCCTAAATTTGTTCTATATTTGCAATTATTTTTCCTTGGTTTTATAAATCCTAATATTTTTGGGTTGATGGCTATCTATGCAAGCAGCCCATCTTTCTTTGGTCAGTAAATTATTGTAATAAAGCCAATGGGGCAATTGTTGATTTCGAATCTTTATAAAACTTTACTTTTGTAGCATCTGGCTTAGCCACACAACACATGATTATCTTAGCTTTCATTTTAATAAATAAAAACTAGTTTGATTAAGGAAAATTTGTATGGATAACTAAAAAATATGGCCTAAAATGCTAAATGGTCTAGATTTTCAAAAAATGTCAACTGATCCTTTGCTGGCATAAGAAGGAAAGAGAAAAAAAAATTCGCTGAGATTGGTTTGTCGGAGAAGTTGTGCCATCACCGGAGAAGAAGAAGGAACAAAGAAGAAAGAAATAAATAACAAATTAATAGTTTGACTCATTGGGCTATATTAAAAAAAAAAAAAAACATTATTCCTTTGATTTTATTCATAAGTTTATGCTTAACCATAGTTAACTCCATCGCCGTAAACTGTCAATTTATGTAGTTGCCTCCTCCGGAGTCAGTTCAATATCCTTCTACTTATGGCTGAATCTTTATCATCATCGTCGTTTCAACCCATTTCTACTCCGATCAATAATATTGCAGTTCAATATGATGTGTTCGTGAGTTTTCGAGGCGAAGATGTAAGAAATAATTTTGTTAGTCATCTTCAGGCAGCATTCGAACGCAAAGGAACCGCAACTTTTTTCGATGAAGAGCTCAAGAGAGGACAGCAAATTGCTCCCGCTCTTCTTAAAGCTATACACAACAATCTTCCATTTCATCGTCGTTTTCTCTGA

mRNA sequence

ATGGAAAGGAATCGACAATGGAAGAAGAAGGGAGAAAGAAGGGACCAAATCGAGAACGGAAGAAGAAGGGAGGAAGAAGAAGGGACGGAATCAAAGAGTTGCCTCCTCCGGAGTCAGTTCAATATCCTTCTACTTATGGCTGAATCTTTATCATCATCGTCGTTTCAACCCATTTCTACTCCGATCAATAATATTGCAGTTCAATATGATGTGTTCGTGAGTTTTCGAGGCGAAGATGTAAGAAATAATTTTGTTAGTCATCTTCAGGCAGCATTCGAACGCAAAGGAACCGCAACTTTTTTCGATGAAGAGCTCAAGAGAGGACAGCAAATTGCTCCCGCTCTTCTTAAAGCTATACACAACAATCTTCCATTTCATCGTCGTTTTCTCTGA

Coding sequence (CDS)

ATGGAAAGGAATCGACAATGGAAGAAGAAGGGAGAAAGAAGGGACCAAATCGAGAACGGAAGAAGAAGGGAGGAAGAAGAAGGGACGGAATCAAAGAGTTGCCTCCTCCGGAGTCAGTTCAATATCCTTCTACTTATGGCTGAATCTTTATCATCATCGTCGTTTCAACCCATTTCTACTCCGATCAATAATATTGCAGTTCAATATGATGTGTTCGTGAGTTTTCGAGGCGAAGATGTAAGAAATAATTTTGTTAGTCATCTTCAGGCAGCATTCGAACGCAAAGGAACCGCAACTTTTTTCGATGAAGAGCTCAAGAGAGGACAGCAAATTGCTCCCGCTCTTCTTAAAGCTATACACAACAATCTTCCATTTCATCGTCGTTTTCTCTGA

Protein sequence

MERNRQWKKKGERRDQIENGRRREEEEGTESKSCLLRSQFNILLLMAESLSSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAIHNNLPFHRRFL

Homology

[Close]

BLAST of Clc11G09090 vs. NCBI nr
Match: XP_038876489.1 (disease resistance protein RLM3-like [Benincasa hispida] >XP_038876490.1 disease resistance protein RLM3-like [Benincasa hispida])

HSP 1 Score: 128.3 bits (321), Expect = 5.0e-26
Identity = 66/77 (85.71%), Postives = 70/77 (90.91%), Query Frame = 0


Query: 46  MAESLSSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEEL 105
           MAE  SSSSFQPIS+P NNIAVQYDVFVSFRGEDVRNNFVSHLQAAF+RKG  TFFDEEL
Sbjct: 1   MAEP-SSSSFQPISSPANNIAVQYDVFVSFRGEDVRNNFVSHLQAAFKRKGITTFFDEEL 60

Query: 106 KRGQQIAPALLKAIHNN 123
           KRGQQI+PALLKAI  +
Sbjct: 61  KRGQQISPALLKAIQQS 76

[Close]

BLAST of Clc11G09090 vs. NCBI nr
Match: RVW15031.1 (TMV resistance protein N [Vitis vinifera])

HSP 1 Score: 80.1 bits (196), Expect = 1.6e-11
Identity = 40/81 (49.38%), Postives = 55/81 (67.90%), Query Frame = 0


Query: 47  AESLSSSSFQPISTPINNIAV-----QYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFF 106
           + S SSSS  P S+P ++ +      +YDVF+SFRGED R +F  HL  A  +KG  TF 
Sbjct: 4   SSSSSSSSSSPFSSPFSSPSSSTHQWEYDVFLSFRGEDTRKSFTDHLHMALRQKGVNTFM 63

Query: 107 DEELKRGQQIAPALLKAIHNN 123
           D++L+RG+QI+PALLKAI  +
Sbjct: 64  DDQLRRGEQISPALLKAIEES 84

[Close]

BLAST of Clc11G09090 vs. NCBI nr
Match: XP_024177746.1 (uncharacterized protein LOC112183608 [Rosa chinensis])

HSP 1 Score: 79.3 bits (194), Expect = 2.6e-11
Identity = 41/79 (51.90%), Postives = 55/79 (69.62%), Query Frame = 0


Query: 45  LMAESLSSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDE- 104
           L+   +   SFQP S+   + + +YDVF+SFRGED R+NFVSHL AA ER G  TF D+ 
Sbjct: 230 LLHNHIKYESFQPSSSSFPHKSHKYDVFLSFRGEDTRSNFVSHLHAALERNGIVTFKDDI 289

Query: 105 ELKRGQQIAPALLKAIHNN 123
            L+RG+ I+P LLKAI ++
Sbjct: 290 RLERGRSISPELLKAIEDS 308

[Close]

BLAST of Clc11G09090 vs. NCBI nr
Match: PRQ38442.1 (putative TIR domain-containing protein [Rosa chinensis])

HSP 1 Score: 78.2 bits (191), Expect = 5.9e-11
Identity = 41/93 (44.09%), Postives = 60/93 (64.52%), Query Frame = 0


Query: 34  CLLRSQFNILLLMAESLSSSSFQPISTPINNIAVQ-------YDVFVSFRGEDVRNNFVS 93
           CLLR Q  + L    S +S +F  + + ++ + ++       Y VF+SFRGED RNNF S
Sbjct: 30  CLLRIQSTLPLSSPNSRNSFTFCLVISQLSMVIIEEASHPWTYHVFLSFRGEDTRNNFTS 89

Query: 94  HLQAAFERKGTATFFDEELKRGQQIAPALLKAI 120
           HL +A  + G  TF D++LKRG++I+PALL+AI
Sbjct: 90  HLCSALRQNGIDTFMDDQLKRGEEISPALLQAI 122

[Close]

BLAST of Clc11G09090 vs. NCBI nr
Match: PON48345.1 (LOW QUALITY PROTEIN: TIR domain containing protein [Trema orientale])

HSP 1 Score: 78.2 bits (191), Expect = 5.9e-11
Identity = 39/78 (50.00%), Postives = 55/78 (70.51%), Query Frame = 0


Query: 46  MAESLSSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDE-E 105
           M  + ++++    S+ I+     YDVF+SFRGED RNNF SHL AA +RK   T+FDE  
Sbjct: 1   MVAAAAAAAAASSSSTISTSEEYYDVFLSFRGEDTRNNFTSHLHAALDRKKIKTYFDETS 60

Query: 106 LKRGQQIAPALLKAIHNN 123
           LKRG++I+PAL++AI N+
Sbjct: 61  LKRGEEISPALMEAIRNS 78

[Close]

BLAST of Clc11G09090 vs. ExPASy Swiss-Prot
Match: V9M398 (Disease resistance protein RUN1 OS=Vitis rotundifolia OX=103349 GN=RUN1 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 3.8e-13
Identity = 39/76 (51.32%), Postives = 50/76 (65.79%), Query Frame = 0


Query: 47  AESLSSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELK 106
           + S +SSS    STP     + YDVF+SFRGED R NF  HL +A  R+G  TF D++L+
Sbjct: 5   SSSRASSSSSSSSTPSIPRTITYDVFLSFRGEDTRFNFTDHLYSALGRRGIRTFRDDKLR 64

Query: 107 RGQQIAPALLKAIHNN 123
           RG+ IAP LLKAI  +
Sbjct: 65  RGEAIAPELLKAIEES 80

[Close]

BLAST of Clc11G09090 vs. ExPASy Swiss-Prot
Match: V9M2S5 (Disease resistance protein RPV1 OS=Vitis rotundifolia OX=103349 GN=RPV1 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 4.2e-12
Identity = 38/77 (49.35%), Postives = 47/77 (61.04%), Query Frame = 0


Query: 46  MAESLSSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEEL 105
           MA + S  +    STP       YDVF+SFRGED R NF  HL +A  R+G  TF D+ L
Sbjct: 1   MASTSSFRASSSSSTPSIPRTTTYDVFLSFRGEDTRYNFTDHLYSALGRRGIRTFRDDRL 60

Query: 106 KRGQQIAPALLKAIHNN 123
           +RG+ IAP LLKAI  +
Sbjct: 61  RRGEAIAPELLKAIEES 77

[Close]

BLAST of Clc11G09090 vs. ExPASy Swiss-Prot
Match: F4JWM0 (Disease resistance-like protein DSC2 OS=Arabidopsis thaliana OX=3702 GN=DSC2 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.0e-10
Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 0


Query: 47  AESLSSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELK 106
           + S S SS   +S+PI+     + VF SFRGEDVR  F+SH+Q  F+ KG   F D+E+K
Sbjct: 40  SSSSSLSSPPSLSSPISR-TWTHQVFPSFRGEDVRKGFLSHIQKEFKSKGIVPFIDDEMK 99

Query: 107 RGQQIAPALLKAIHNN 123
           RG+ I P L +AI  +
Sbjct: 100 RGESIGPGLFQAIRES 114

[Close]

BLAST of Clc11G09090 vs. ExPASy Swiss-Prot
Match: Q9FI14 (Disease resistance protein TAO1 OS=Arabidopsis thaliana OX=3702 GN=TAO1 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 8.8e-10
Identity = 37/77 (48.05%), Postives = 48/77 (62.34%), Query Frame = 0


Query: 46  MAESLSSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEEL 105
           ++ SLSSSS  P S   N +   + VF+SFRGEDVR   +SH+Q  F+R G   F D E+
Sbjct: 21  ISSSLSSSS-PPSSLSQNWL---HPVFLSFRGEDVRKGLLSHIQKEFQRNGITPFIDNEM 80

Query: 106 KRGQQIAPALLKAIHNN 123
           KRG  I P LL+AI  +
Sbjct: 81  KRGGSIGPELLQAIRGS 93

[Close]

BLAST of Clc11G09090 vs. ExPASy Swiss-Prot
Match: O82500 (Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana OX=3702 GN=At4g11170 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.5e-09
Identity = 31/55 (56.36%), Postives = 36/55 (65.45%), Query Frame = 0


Query: 68  QYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAIHNN 123
           +YDVF SFRGEDVRNNF+SHL   FE KG  TF D+ +KR   I   L  AI  +
Sbjct: 10  RYDVFPSFRGEDVRNNFLSHLLKEFESKGIVTFRDDHIKRSHTIGHELRAAIRES 64

[Close]

BLAST of Clc11G09090 vs. ExPASy TrEMBL
Match: A0A438BVL8 (TMV resistance protein N OS=Vitis vinifera OX=29760 GN=N_6 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 7.5e-12
Identity = 40/81 (49.38%), Postives = 55/81 (67.90%), Query Frame = 0


Query: 47  AESLSSSSFQPISTPINNIAV-----QYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFF 106
           + S SSSS  P S+P ++ +      +YDVF+SFRGED R +F  HL  A  +KG  TF 
Sbjct: 4   SSSSSSSSSSPFSSPFSSPSSSTHQWEYDVFLSFRGEDTRKSFTDHLHMALRQKGVNTFM 63

Query: 107 DEELKRGQQIAPALLKAIHNN 123
           D++L+RG+QI+PALLKAI  +
Sbjct: 64  DDQLRRGEQISPALLKAIEES 84

[Close]

BLAST of Clc11G09090 vs. ExPASy TrEMBL
Match: A0A2P6QW67 (Putative TIR domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0413961 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.9e-11
Identity = 41/93 (44.09%), Postives = 60/93 (64.52%), Query Frame = 0


Query: 34  CLLRSQFNILLLMAESLSSSSFQPISTPINNIAVQ-------YDVFVSFRGEDVRNNFVS 93
           CLLR Q  + L    S +S +F  + + ++ + ++       Y VF+SFRGED RNNF S
Sbjct: 30  CLLRIQSTLPLSSPNSRNSFTFCLVISQLSMVIIEEASHPWTYHVFLSFRGEDTRNNFTS 89

Query: 94  HLQAAFERKGTATFFDEELKRGQQIAPALLKAI 120
           HL +A  + G  TF D++LKRG++I+PALL+AI
Sbjct: 90  HLCSALRQNGIDTFMDDQLKRGEEISPALLQAI 122

[Close]

BLAST of Clc11G09090 vs. ExPASy TrEMBL
Match: A0A2P5BHT4 (TIR domain containing protein OS=Trema orientale OX=63057 GN=TorRG33x02_320860 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.9e-11
Identity = 39/78 (50.00%), Postives = 55/78 (70.51%), Query Frame = 0


Query: 46  MAESLSSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDE-E 105
           M  + ++++    S+ I+     YDVF+SFRGED RNNF SHL AA +RK   T+FDE  
Sbjct: 1   MVAAAAAAAAASSSSTISTSEEYYDVFLSFRGEDTRNNFTSHLHAALDRKKIKTYFDETS 60

Query: 106 LKRGQQIAPALLKAIHNN 123
           LKRG++I+PAL++AI N+
Sbjct: 61  LKRGEEISPALMEAIRNS 78

[Close]

BLAST of Clc11G09090 vs. ExPASy TrEMBL
Match: A0A2P6Q5H1 (Putative winged helix-turn-helix DNA-binding domain, toll-like receptor OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0013881 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 3.7e-11
Identity = 41/72 (56.94%), Postives = 50/72 (69.44%), Query Frame = 0


Query: 51  SSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQ 110
           SSSS  P  +P +  A +YDVF+SFRGED RN F SHL AA  RK   T+ D EL RG++
Sbjct: 3   SSSSSSPSRSPAH--AFKYDVFLSFRGEDTRNTFTSHLHAALVRKKIKTYIDYELVRGEE 62

Query: 111 IAPALLKAIHNN 123
           IAPALL+AI  +
Sbjct: 63  IAPALLEAIEES 72

[Close]

BLAST of Clc11G09090 vs. ExPASy TrEMBL
Match: A0A6P5TE95 (TMV resistance protein N-like OS=Prunus avium OX=42229 GN=LOC110766460 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 3.7e-11
Identity = 36/67 (53.73%), Postives = 47/67 (70.15%), Query Frame = 0


Query: 56  QPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPAL 115
           QP+S+  ++ +  YDVF+SFRGED R NF  HL  A  RKG  TF D EL RG++I+PAL
Sbjct: 4   QPVSSSPSSSSSPYDVFLSFRGEDTRTNFTDHLHEALVRKGIRTFIDRELVRGEEISPAL 63

Query: 116 LKAIHNN 123
           +KAI  +
Sbjct: 64  VKAIEES 70

[Close]

BLAST of Clc11G09090 vs. TAIR 10
Match: AT3G04220.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 75.1 bits (183), Expect = 4.7e-14
Identity = 38/78 (48.72%), Postives = 56/78 (71.79%), Query Frame = 0


Query: 48  ESLSSSSFQPI-STPINNIAV--QYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEE 107
           E+ SSSS QP  S P++++++  +YDVF SFRGEDVR +F+SH+Q  F+R+G   F D  
Sbjct: 39  ENDSSSSTQPSPSPPLSSLSLTRKYDVFPSFRGEDVRKDFLSHIQKEFQRQGITPFVDNN 98

Query: 108 LKRGQQIAPALLKAIHNN 123
           +KRG+ I P L++AI  +
Sbjct: 99  IKRGESIGPELIRAIRGS 116

[Close]

BLAST of Clc11G09090 vs. TAIR 10
Match: AT5G18370.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 67.8 bits (164), Expect = 7.4e-12
Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 0


Query: 47  AESLSSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEELK 106
           + S S SS   +S+PI+     + VF SFRGEDVR  F+SH+Q  F+ KG   F D+E+K
Sbjct: 40  SSSSSLSSPPSLSSPISR-TWTHQVFPSFRGEDVRKGFLSHIQKEFKSKGIVPFIDDEMK 99

Query: 107 RGQQIAPALLKAIHNN 123
           RG+ I P L +AI  +
Sbjct: 100 RGESIGPGLFQAIRES 114

[Close]

BLAST of Clc11G09090 vs. TAIR 10
Match: AT1G69550.1 (disease resistance protein (TIR-NBS-LRR class) )

HSP 1 Score: 67.4 bits (163), Expect = 9.7e-12
Identity = 42/106 (39.62%), Postives = 59/106 (55.66%), Query Frame = 0


Query: 21  RRREEEEGTESKSCLLRSQFNILLLMAESLSSSSFQPIS--TPINNIAV--QYDVFVSFR 80
           R  +E E   S S    S          +LSSS+  P S  +P ++++    + VF SFR
Sbjct: 28  RIHQENEDVGSSSTSPPSSLASSTSPPSTLSSSTSHPSSSTSPPSSLSCTGTHHVFPSFR 87

Query: 81  GEDVRNNFVSHLQAAFERKGTATFFDEELKRGQQIAPALLKAIHNN 123
           G+DVR NF+SH+Q  F RKG   F D E++RG+ I P L+KAI  +
Sbjct: 88  GDDVRRNFLSHIQKEFRRKGITPFIDNEIRRGESIGPELIKAIRES 133

[Close]

BLAST of Clc11G09090 vs. TAIR 10
Match: AT5G11250.1 (Disease resistance protein (TIR-NBS-LRR class) )

HSP 1 Score: 67.4 bits (163), Expect = 9.7e-12
Identity = 35/79 (44.30%), Postives = 48/79 (60.76%), Query Frame = 0


Query: 46  MAESLSSSSFQPIST--PINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDE 105
           ++ S S SS  P S   P ++    + VF SF GEDVR +F+SH+Q  F+R G   F D 
Sbjct: 37  LSPSSSPSSLSPSSVPPPSSSCIWTHQVFPSFSGEDVRRDFLSHIQMEFQRMGITPFVDN 96

Query: 106 ELKRGQQIAPALLKAIHNN 123
           E+KRG+ I P LL+AI  +
Sbjct: 97  EIKRGESIGPELLRAIRGS 115

[Close]

BLAST of Clc11G09090 vs. TAIR 10
Match: AT5G44510.1 (target of AVRB operation1 )

HSP 1 Score: 64.7 bits (156), Expect = 6.3e-11
Identity = 37/77 (48.05%), Postives = 48/77 (62.34%), Query Frame = 0


Query: 46  MAESLSSSSFQPISTPINNIAVQYDVFVSFRGEDVRNNFVSHLQAAFERKGTATFFDEEL 105
           ++ SLSSSS  P S   N +   + VF+SFRGEDVR   +SH+Q  F+R G   F D E+
Sbjct: 21  ISSSLSSSS-PPSSLSQNWL---HPVFLSFRGEDVRKGLLSHIQKEFQRNGITPFIDNEM 80

Query: 106 KRGQQIAPALLKAIHNN 123
           KRG  I P LL+AI  +
Sbjct: 81  KRGGSIGPELLQAIRGS 93

The following BLAST results are available for this feature:

BLAST of Clc11G09090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876489.1	5.0e-26	85.71	disease resistance protein RLM3-like [Benincasa hispida] >XP_038876490.1 disease...	[more]
RVW15031.1	1.6e-11	49.38	TMV resistance protein N [Vitis vinifera]	[more]
XP_024177746.1	2.6e-11	51.90	uncharacterized protein LOC112183608 [Rosa chinensis]	[more]
PRQ38442.1	5.9e-11	44.09	putative TIR domain-containing protein [Rosa chinensis]	[more]
PON48345.1	5.9e-11	50.00	LOW QUALITY PROTEIN: TIR domain containing protein [Trema orientale]	[more]

BLAST of Clc11G09090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
V9M398	3.8e-13	51.32	Disease resistance protein RUN1 OS=Vitis rotundifolia OX=103349 GN=RUN1 PE=1 SV=...	[more]
V9M2S5	4.2e-12	49.35	Disease resistance protein RPV1 OS=Vitis rotundifolia OX=103349 GN=RPV1 PE=1 SV=...	[more]
F4JWM0	1.0e-10	46.05	Disease resistance-like protein DSC2 OS=Arabidopsis thaliana OX=3702 GN=DSC2 PE=...	[more]
Q9FI14	8.8e-10	48.05	Disease resistance protein TAO1 OS=Arabidopsis thaliana OX=3702 GN=TAO1 PE=3 SV=...	[more]
O82500	1.5e-09	56.36	Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Clc11G09090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A438BVL8	7.5e-12	49.38	TMV resistance protein N OS=Vitis vinifera OX=29760 GN=N_6 PE=4 SV=1	[more]
A0A2P6QW67	2.9e-11	44.09	Putative TIR domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Ch...	[more]
A0A2P5BHT4	2.9e-11	50.00	TIR domain containing protein OS=Trema orientale OX=63057 GN=TorRG33x02_320860 P...	[more]
A0A2P6Q5H1	3.7e-11	56.94	Putative winged helix-turn-helix DNA-binding domain, toll-like receptor OS=Rosa ...	[more]
A0A6P5TE95	3.7e-11	53.73	TMV resistance protein N-like OS=Prunus avium OX=42229 GN=LOC110766460 PE=4 SV=1	[more]

BLAST of Clc11G09090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04220.1	4.7e-14	48.72	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT5G18370.1	7.4e-12	46.05	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT1G69550.1	9.7e-12	39.62	disease resistance protein (TIR-NBS-LRR class)	[more]
AT5G11250.1	9.7e-12	44.30	Disease resistance protein (TIR-NBS-LRR class)	[more]
AT5G44510.1	6.3e-11	48.05	target of AVRB operation1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PFAM	PF01582	TIR	coord: 68..121 e-value: 1.2E-12 score: 48.0
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PROSITE	PS50104	TIR	coord: 67..130 score: 17.269936
IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	GENE3D	3.40.50.10140		coord: 66..122 e-value: 9.6E-19 score: 69.5
IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	SUPERFAMILY	52200	Toll/Interleukin receptor TIR domain	coord: 66..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR32009	TMV RESISTANCE PROTEIN N-LIKE	coord: 62..122
None	No IPR available	PANTHER	PTHR32009:SF52	DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS)	coord: 62..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc11G09090.1	Clc11G09090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007165	signal transduction
molecular_function	GO:0003953	NAD+ nucleosidase activity