Clc11G08080 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc11G08080
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic
Location	ClcChr11: 7846636 .. 7847056 (-)
RNA-Seq Expression	Clc11G08080
Synteny	Clc11G08080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CATGATAGTGAATATGGGACCTCACCACCCATCAATGCACGGTGTTCTTCGACTCATCCTTACTTTGGATGGTGAAGATGTTATTGACTGTGAACCAATATTGGGTTATTTACACAGAGGGATGGAAAAAATTGCAGAAAACCGAACAATTATACAATATCTACCTTATGTAACACGTTGGGATTATTTAGCTACTATGTTTACAGAAGCAATAACCGTAAATGGTCCAGAACAGTTGGGAAATATTCAAGTACCTAAAAGAGCCAGCTATATCAGAGTAATTATGTTGGAGTTGAGTCGTATAGCTTCTCATCTGTTATGGCTTGGCCCTTTTATGGCGGATATTGGGGCACAGACTCCTTTCTTCTATATTTTCAGAGAAAGAGAATTAGTATATGATTTATTCGAAGCCCTCCTGTGA

mRNA sequence

CATGATAGTGAATATGGGACCTCACCACCCATCAATGCACGGTGTTCTTCGACTCATCCTTACTTTGGATGGTGAAGATGTTATTGACTGTGAACCAATATTGGGTTATTTACACAGAGGGATGGAAAAAATTGCAGAAAACCGAACAATTATACAATATCTACCTTATGTAACACGTTGGGATTATTTAGCTACTATGTTTACAGAAGCAATAACCGTAAATGGTCCAGAACAGTTGGGAAATATTCAAGTACCTAAAAGAGCCAGCTATATCAGAGTAATTATGTTGGAGTTGAGTCGTATAGCTTCTCATCTGTTATGGCTTGGCCCTTTTATGGCGGATATTGGGGCACAGACTCCTTTCTTCTATATTTTCAGAGAAAGAGAATTAGTATATGATTTATTCGAAGCCCTCCTGTGA

Coding sequence (CDS)

ATGATAGTGAATATGGGACCTCACCACCCATCAATGCACGGTGTTCTTCGACTCATCCTTACTTTGGATGGTGAAGATGTTATTGACTGTGAACCAATATTGGGTTATTTACACAGAGGGATGGAAAAAATTGCAGAAAACCGAACAATTATACAATATCTACCTTATGTAACACGTTGGGATTATTTAGCTACTATGTTTACAGAAGCAATAACCGTAAATGGTCCAGAACAGTTGGGAAATATTCAAGTACCTAAAAGAGCCAGCTATATCAGAGTAATTATGTTGGAGTTGAGTCGTATAGCTTCTCATCTGTTATGGCTTGGCCCTTTTATGGCGGATATTGGGGCACAGACTCCTTTCTTCTATATTTTCAGAGAAAGAGAATTAGTATATGATTTATTCGAAGCCCTCCTGTGA

Protein sequence

MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEALL

Homology

[Close]

BLAST of Clc11G08080 vs. NCBI nr
Match: QJX65493.1 (NADH-plastoquinone oxidoreductase subunit 7 [Mesua ferrea])

HSP 1 Score: 285.4 bits (729), Expect = 2.6e-73
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW 60
           MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW
Sbjct: 1   MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW 60

Query: 61  DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP 120
           DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP
Sbjct: 61  DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP 120

Query: 121 FFYIFRERELVYDLFEA 138
           FFYIFRERELVYDLFEA
Sbjct: 121 FFYIFRERELVYDLFEA 137

[Close]

BLAST of Clc11G08080 vs. NCBI nr
Match: AFB70573.1 (NADH dehydrogenase subunit 7, partial [Pereskiopsis diguetii])

HSP 1 Score: 285.4 bits (729), Expect = 2.6e-73
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW 60
           MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW
Sbjct: 11  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW 70

Query: 61  DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP 120
           DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP
Sbjct: 71  DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP 130

Query: 121 FFYIFRERELVYDLFEA 138
           FFYIFRERELVYDLFEA
Sbjct: 131 FFYIFRERELVYDLFEA 147

[Close]

BLAST of Clc11G08080 vs. NCBI nr
Match: YP_010119790.1 (NADH-plastoquinone oxidoreductase subunit 7 [Hemsleya zhejiangensis] >QRC26911.1 NADH-plastoquinone oxidoreductase subunit 7 [Hemsleya zhejiangensis])

HSP 1 Score: 285.4 bits (729), Expect = 2.6e-73
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW 60
           MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW
Sbjct: 11  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW 70

Query: 61  DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP 120
           DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP
Sbjct: 71  DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP 130

Query: 121 FFYIFRERELVYDLFEA 138
           FFYIFRERELVYDLFEA
Sbjct: 131 FFYIFRERELVYDLFEA 147

[Close]

BLAST of Clc11G08080 vs. NCBI nr
Match: YP_009557444.1 (NADH-plastoquinone oxidoreductase subunit 7 [Kewa sp. GY-2019] >QBC72129.1 NADH-plastoquinone oxidoreductase subunit 7 [Kewa sp. GY-2019])

HSP 1 Score: 285.4 bits (729), Expect = 2.6e-73
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW 60
           MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW
Sbjct: 11  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW 70

Query: 61  DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP 120
           DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP
Sbjct: 71  DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP 130

Query: 121 FFYIFRERELVYDLFEA 138
           FFYIFRERELVYDLFEA
Sbjct: 131 FFYIFRERELVYDLFEA 147

[Close]

BLAST of Clc11G08080 vs. NCBI nr
Match: YP_009420851.1 (NADH dehydrogenase subunit 7 [Citrullus colocynthis] >YP_009431699.1 NADH dehydrogenase subunit 7 [Citrullus rehmii] >YP_009456203.1 NADH dehydrogenase subunit 7 [Lagenaria siceraria] >QNM38588.1 NADH-plastoquinone oxidoreductase subunit 7 [Lagenaria siceraria var. microcarpa] >QZL38651.1 NADH dehydrogenase subunit H [Citrullus naudinianus] >ASP44514.1 NADH dehydrogenase subunit 7 [Citrullus colocynthis] >ASY96295.1 NADH dehydrogenase subunit 7 [Citrullus rehmii] >AUJ21968.1 NADH dehydrogenase subunit 7 [Lagenaria siceraria])

HSP 1 Score: 285.4 bits (729), Expect = 2.6e-73
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW 60
           MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW
Sbjct: 11  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW 70

Query: 61  DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP 120
           DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP
Sbjct: 71  DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP 130

Query: 121 FFYIFRERELVYDLFEA 138
           FFYIFRERELVYDLFEA
Sbjct: 131 FFYIFRERELVYDLFEA 147

[Close]

BLAST of Clc11G08080 vs. ExPASy Swiss-Prot
Match: Q4VZL2 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhH PE=3 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 3.4e-76
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW 60
           MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW
Sbjct: 11  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW 70

Query: 61  DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP 120
           DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP
Sbjct: 71  DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP 130

Query: 121 FFYIFRERELVYDLFEA 138
           FFYIFRERELVYDLFEA
Sbjct: 131 FFYIFRERELVYDLFEA 147

[Close]

BLAST of Clc11G08080 vs. ExPASy Swiss-Prot
Match: Q49KU2 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ndhH PE=3 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 4.5e-76
Identity = 136/137 (99.27%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW 60
           MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRT+IQYLPYVTRW
Sbjct: 11  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTVIQYLPYVTRW 70

Query: 61  DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP 120
           DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP
Sbjct: 71  DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP 130

Query: 121 FFYIFRERELVYDLFEA 138
           FFYIFRERELVYDLFEA
Sbjct: 131 FFYIFRERELVYDLFEA 147

[Close]

BLAST of Clc11G08080 vs. ExPASy Swiss-Prot
Match: B1A990 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Carica papaya OX=3649 GN=ndhH PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 7.6e-76
Identity = 136/137 (99.27%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW 60
           MIVNMGPHHPSMHGVLRLI+TLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW
Sbjct: 11  MIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW 70

Query: 61  DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP 120
           DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP
Sbjct: 71  DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP 130

Query: 121 FFYIFRERELVYDLFEA 138
           FFYIFRERELVYDLFEA
Sbjct: 131 FFYIFRERELVYDLFEA 147

[Close]

BLAST of Clc11G08080 vs. ExPASy Swiss-Prot
Match: B0Z4T1 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Oenothera argillicola OX=3940 GN=ndhH PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 7.6e-76
Identity = 134/137 (97.81%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW 60
           MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRT+IQYLPYVTRW
Sbjct: 11  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTVIQYLPYVTRW 70

Query: 61  DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP 120
           DYLATMFTEAIT+NGPEQLGNIQVPKRASYIR+IMLELSRIASHLLWLGPFMADIGAQTP
Sbjct: 71  DYLATMFTEAITINGPEQLGNIQVPKRASYIRIIMLELSRIASHLLWLGPFMADIGAQTP 130

Query: 121 FFYIFRERELVYDLFEA 138
           FFYIFRERELVYDLFEA
Sbjct: 131 FFYIFRERELVYDLFEA 147

[Close]

BLAST of Clc11G08080 vs. ExPASy Swiss-Prot
Match: B0Z515 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Oenothera biennis OX=3942 GN=ndhH PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 7.6e-76
Identity = 134/137 (97.81%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW 60
           MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRT+IQYLPYVTRW
Sbjct: 11  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTVIQYLPYVTRW 70

Query: 61  DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP 120
           DYLATMFTEAIT+NGPEQLGNIQVPKRASYIR+IMLELSRIASHLLWLGPFMADIGAQTP
Sbjct: 71  DYLATMFTEAITINGPEQLGNIQVPKRASYIRIIMLELSRIASHLLWLGPFMADIGAQTP 130

Query: 121 FFYIFRERELVYDLFEA 138
           FFYIFRERELVYDLFEA
Sbjct: 131 FFYIFRERELVYDLFEA 147

[Close]

BLAST of Clc11G08080 vs. ExPASy TrEMBL
Match: A0A218KGA7 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=ndhH PE=3 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.3e-73
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW 60
           MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW
Sbjct: 11  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW 70

Query: 61  DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP 120
           DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP
Sbjct: 71  DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP 130

Query: 121 FFYIFRERELVYDLFEA 138
           FFYIFRERELVYDLFEA
Sbjct: 131 FFYIFRERELVYDLFEA 147

[Close]

BLAST of Clc11G08080 vs. ExPASy TrEMBL
Match: A0A6H0ESV0 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Trichosanthes kirilowii OX=3677 GN=ndhH PE=3 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.3e-73
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW 60
           MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW
Sbjct: 11  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW 70

Query: 61  DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP 120
           DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP
Sbjct: 71  DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP 130

Query: 121 FFYIFRERELVYDLFEA 138
           FFYIFRERELVYDLFEA
Sbjct: 131 FFYIFRERELVYDLFEA 147

[Close]

BLAST of Clc11G08080 vs. ExPASy TrEMBL
Match: G3ETV5 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis melo subsp. melo OX=412675 GN=ndhH PE=3 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.3e-73
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW 60
           MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW
Sbjct: 11  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW 70

Query: 61  DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP 120
           DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP
Sbjct: 71  DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP 130

Query: 121 FFYIFRERELVYDLFEA 138
           FFYIFRERELVYDLFEA
Sbjct: 131 FFYIFRERELVYDLFEA 147

[Close]

BLAST of Clc11G08080 vs. ExPASy TrEMBL
Match: A0A1X9Q1R4 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhH PE=3 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.3e-73
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW 60
           MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW
Sbjct: 11  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW 70

Query: 61  DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP 120
           DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP
Sbjct: 71  DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP 130

Query: 121 FFYIFRERELVYDLFEA 138
           FFYIFRERELVYDLFEA
Sbjct: 131 FFYIFRERELVYDLFEA 147

[Close]

BLAST of Clc11G08080 vs. ExPASy TrEMBL
Match: A0A1S4EU61 (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis melo OX=3656 GN=ndhH PE=3 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.3e-73
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW 60
           MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW
Sbjct: 11  MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW 70

Query: 61  DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP 120
           DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP
Sbjct: 71  DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP 130

Query: 121 FFYIFRERELVYDLFEA 138
           FFYIFRERELVYDLFEA
Sbjct: 131 FFYIFRERELVYDLFEA 147

[Close]

BLAST of Clc11G08080 vs. TAIR 10
Match: ATCG01110.1 (NAD(P)H dehydrogenase subunit H )

HSP 1 Score: 280.4 bits (716), Expect = 7.8e-76
Identity = 133/137 (97.08%), Postives = 135/137 (98.54%), Query Frame = 0


Query: 1   MIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRW 60
           MIVNMGPHHPSMHGVLRLI+TLDGEDV+DCEPILGYLHRGMEKIAENR IIQYLPYVTRW
Sbjct: 11  MIVNMGPHHPSMHGVLRLIVTLDGEDVVDCEPILGYLHRGMEKIAENRAIIQYLPYVTRW 70

Query: 61  DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP 120
           DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP
Sbjct: 71  DYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTP 130

Query: 121 FFYIFRERELVYDLFEA 138
           FFYIFRERE VYDLFEA
Sbjct: 131 FFYIFREREFVYDLFEA 147

[Close]

BLAST of Clc11G08080 vs. TAIR 10
Match: ATMG00510.1 (NADH dehydrogenase subunit 7 )

HSP 1 Score: 126.3 bits (316), Expect = 1.9e-29
Identity = 62/133 (46.62%), Postives = 85/133 (63.91%), Query Frame = 0


Query: 4   NMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYL 63
           N GP HP+ HGV RL+L ++GE V   EP +G LHRG EK+ E +T +Q LPY  R DY+
Sbjct: 14  NFGPQHPAAHGVSRLVLEMNGEVVERAEPHIGSLHRGTEKLIEYKTYLQALPYSDRSDYV 73

Query: 64  ATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFY 123
           + M  E    +  E+L N +VP RA YIRV+  E++RI++H L L     D+GA TPF +
Sbjct: 74  SMMAQEHAHSSAVEKLLNCEVPLRAQYIRVLFREITRISNHSLALTTHAMDVGALTPFLW 133

Query: 124 IFRERELVYDLFE 137
            F ERE + + +E
Sbjct: 134 AFEEREKLLEFYE 146

The following BLAST results are available for this feature:

BLAST of Clc11G08080 vs. NCBI nr


Match Name	E-value	Identity	Description
QJX65493.1	2.6e-73	100.00	NADH-plastoquinone oxidoreductase subunit 7 [Mesua ferrea]	[more]
AFB70573.1	2.6e-73	100.00	NADH dehydrogenase subunit 7, partial [Pereskiopsis diguetii]	[more]
YP_010119790.1	2.6e-73	100.00	NADH-plastoquinone oxidoreductase subunit 7 [Hemsleya zhejiangensis] >QRC26911.1...	[more]
YP_009557444.1	2.6e-73	100.00	NADH-plastoquinone oxidoreductase subunit 7 [Kewa sp. GY-2019] >QBC72129.1 NADH-...	[more]
YP_009420851.1	2.6e-73	100.00	NADH dehydrogenase subunit 7 [Citrullus colocynthis] >YP_009431699.1 NADH dehydr...	[more]

BLAST of Clc11G08080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZL2	3.4e-76	100.00	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis sativus OX=36...	[more]
Q49KU2	4.5e-76	99.27	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Eucalyptus globulus s...	[more]
B1A990	7.6e-76	99.27	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Carica papaya OX=3649...	[more]
B0Z4T1	7.6e-76	97.81	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Oenothera argillicola...	[more]
B0Z515	7.6e-76	97.81	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Oenothera biennis OX=...	[more]

BLAST of Clc11G08080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A218KGA7	1.3e-73	100.00	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis sativus var. ...	[more]
A0A6H0ESV0	1.3e-73	100.00	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Trichosanthes kirilow...	[more]
G3ETV5	1.3e-73	100.00	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis melo subsp. m...	[more]
A0A1X9Q1R4	1.3e-73	100.00	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis sativus OX=36...	[more]
A0A1S4EU61	1.3e-73	100.00	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Cucumis melo OX=3656 ...	[more]

BLAST of Clc11G08080 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG01110.1	7.8e-76	97.08	NAD(P)H dehydrogenase subunit H	[more]
ATMG00510.1	1.9e-29	46.62	NADH dehydrogenase subunit 7	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029014	[NiFe]-hydrogenase, large subunit	GENE3D	1.10.645.10		coord: 1..139 e-value: 1.4E-51 score: 177.4
IPR029014	[NiFe]-hydrogenase, large subunit	SUPERFAMILY	56762	HydB/Nqo4-like	coord: 10..138
IPR022885	NAD(P)H-quinone oxidoreductase subunit D/H	PANTHER	PTHR11993	NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNIT	coord: 1..137
None	No IPR available	PANTHER	PTHR11993:SF39	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT H, CHLOROPLASTIC	coord: 1..137
IPR014029	NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site	PROSITE	PS00535	COMPLEX1_49K	coord: 37..48

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc11G08080.1	Clc11G08080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019684	photosynthesis, light reaction
cellular_component	GO:0009535	chloroplast thylakoid membrane
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
molecular_function	GO:0048038	quinone binding
molecular_function	GO:0016651	oxidoreductase activity, acting on NAD(P)H