Clc11G07950 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc11G07950
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Protein Ycf2
Location	ClcChr11: 7813219 .. 7817204 (-)
RNA-Seq Expression	Clc11G07950
Synteny	Clc11G07950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCCTAGAGAATTACCAAAATACGAAGTTCTCTTCTCCTTAGCACAAGCACTAAGTAAGCAAGCGGGGATCCCCCTTAAGATTAGGGGGAAACAGAGATAAACCAGACAAAGGGGAAATGAACAAATAAATCATCGATTATCCCATAGTACTATCAAAGTTCTGACATAAGAACTTTTTGTCAGGCTACTGTTCTCTTGTTTTTCTGTTTTTTTATGGATTGCCATTTCAAGTGTTGCTCCCATCGGACTTCTTATGTCAGGATATGGATCCAATAATAAATATTCCTTTTTAGGTGGTCTACGAGCTGCTGCTCAATCAATTAGTTATGAAATACCATTAACTCTATGTATTGTGTCGATTCTTTTGAGTAATATATCTGGAAATCCCGATGGATTCCTTATTAACACCGTTTCGAACACAACGAGTACATTCCAAAATAACTGTTACTCGGGCATCTTTACCCTTGGCCATGAACCTCCCTTGGATTTTTGATTCACGCAACTCTTCTATTTTCCGGAAAAATGATTTATTCTTCTTCCACTATTCTTTTTTTCTTACGACACGACAATCAAATCTAGATTTTCGGATTTTTCGAACAAAGCATCAATCTGCGGTTGAGTTTGGATTAGAATTTTAATTCAATTAAAGAGTAAGATAGAGAGGGAGGGCAGAGCTTTTTTTGGTTTTTTCATGTTGTCAAAGAGTTGAACAATGGTTTTTTCGTGTTGTCAAAGAGTTGAACAATGAAAATAGATGGCGAGTGCCTAATCGAATTGATCGGGTCATCGGAACTGTTAATCATAGAGCTGGAGTCTTTCTGTCCGCTAGTCAGGAATGGAATCGGACGCTACGAATACGATGAATGGGGGGCGTTGGACAAATAAATAGGGCACTACTAGGCCTTAGTGGCTTAGGACATTAGCTGTAAGACTTCCAAGACTAGAGCTCTGAGGGATCTCTCTTATTTTTTTTCCACATTTTTCACCAAAAAAAATATGGGAATTTCTATTTCTTCAACGAGTACTAATTGATGGGAGAAAGACATATGTGCTATATGTGAATTACCACAATTATTGGTAGAATCATATTCAGGATTCGAAGGAATACCGTACTGGGTCTAGTTGATTACGCCCGATTTTTCTAATGAAATAGAGTACTATACGTTTCCGGGAAGCACATACACAAAAGGGATTTGGACGATACAAAATAAATTTTACATAGTAAACTTTGCTCTAATTTTTCGTCTTAAAGCCAAATATATCCGTTCTGGCTCCGATTTTTTGTAACCTCAATTAGTAAATTCAATTACTAATTTGAATTTGAAATAATCTATCTCATTAAAATTTCACACTTAACTTTTGCTATATACGTCCTCTTTACAGGGAGTTGTTAACATACAATTTTACAGCCAGGTCAATACTCTTTTACAGGGAAAAGAACAGATAACAAGTCTAATTACCGGCAAAATCAATGGCACATGGAGCATTACAACAGATAGAACAGGTGACATAATAGACAGGTTGTTGTTCAGTACCTTCTTCTCTAACGAGGACTGCTGCAATGAGAAGTGGGTCCATGTAAATGATCGAGACCTCGCAAACAACAACGCTCCTTCCCCATATGGAGTTCGGAACCCAAAGGCAATCGTTGAGTGAACTGTATCTTCTTTGTGTTAGTTGACCTAAGCCGCACCATTACTGCTGGGGTGGGGCTCGGCCAGGTGTTTTCACGTCTCATCGTAGTGCCCGGTTTGTCTTGATTTCCGATTGATGAACAAGAAGGAAAAGAGAACTATTGGATTTTTTGACTCGCCCCCGGCTACGTGTCCTTTGGACCCTTCGCCCGCCACCAGTGGAAGCGGCTCCATTGCGTGTGCTCGGGGTAGAAGTTTTGTATAAATGTATCGCCATGCTATTAAGTATTTTGATTTAAGTTCTTTTCTTTCTAAGAGGTGGAATAGAATAACCCGGTTGAAGCGTAATGATCATACGTCTGTAATGCATTGTATGTCCCATAATAGGTCCCATTCTTCTACCCTTTCCTGGGAGTCGATTACTATTCATAGCTATTACCTTGACACCAAAGAAGAGTTCGACCCAATGCTTTATTTCTGTCTAGGCGCTGTGCTTATCGACCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTAGAAGAAGGCTTTGTCTCGTCCCTTCCCATTGTAATTGTAGGAGGGAAAGTAAAAGAAGCTAACCCGAATGAAAAGAGAATGAATCAGAGTTTCAATCAAAGATGGATTCCACTGAATCCTGGTAATCTGACATGGTATGCCCAGATCGACTAAACGAATAGAAATCTCTGATCAACGATAGAACAAGATCCATTTTGTATCATATCTAAGGGATTCCTGGGTTCGGGCCGAAGAAGCAATGTCACTCGATCATTATCAAATCGACTGCAATCTTTTTCTGTTCGTGAGGATCCCAACAGAGCGCCTTCTACTTCTAGAGATGATCATAGAAAATGTGAAATATTTGATAGGATCCGTTTCGGGAACGTAGAATGTCAGAGAAATTCAAATGTTATAAAAAGTAGATCTATCGATCCAAATTGATTTGTCCATCAGTAATGGGGGTTCGTGCTTTAGCACTTTGATTTCCCAGAGTTTTTATGTGTTTCCACACCCCTTCGAGACCCCGAAAAATGAACAACTTTTCTTCGGAACACATACAAGATTCTTCATTGCAAAAAGGATAATGGTAACCCCACCATTAACTACTTCATTTATGAATTTCATAGTAATAGAAATACATGTTCTCAAATAGGAATAACCGAACCACGTCTACAAAATGCCAGTACCATGCAGCAGCTTCAAAGCCAACGTGATGCTCCTTGGTCAGATGACCAAGATATTGGCGAATACCACATATGATCAAGAAAAGAGTACCTATAATCACATGAAAACCATGAAAGCCAGTTGCCCCGAATTAGCACTTCTCAGATCAGGCTAGGCGCCTCTCCAGCGGAGCTGGGCGCCGGGGCCCTGGATGCGCTAGCGATCAGCACATAGGGGGGTGGGTTGCCCGGGTTTCTCGGCCTGGTATCCTGCACCTCGCGTTCATGATATCTACATTCAACTGCGCCCCGGAGACACGTTTTCTTATTGATGATAGTGACGATATTGATGATAGTGGCGATATTGATGATAGTGACGATATCGACCGTGACCTTGATACGGAGCTGGAGCTTTTAACTATGATGAATGCGCTAACTATGGATATGATGCCGGAAATAGACCGATTTTATATCACCCTTCAATTCAAATTAACAAAAGCAATGTCTCCTTGCATAATATGGATTCCAAACATTCATGATTTGGATGTGAATGAGTCGAATTACTTATCCCTTGGTCTATTAGTGAACTATCTCTCCAGGGATTGTGAAAGATGTTCCACTAGAAATATTCTTGTTATTGCTTCGACCCATATTCCCCAAAAAGTGGATCCCGCTCTAATAGCTCCGAATAAATTAAATACATGCATTAAAATACGAAGGCTTCTTATTTCACAACAACGAAAGCACTTTTTCACTCTTTCATATACTAGGGGATTTCACTTGGAAAAGAAAATGTTCCATACTAATGGATTCGGTTCCATAACCATGGGTTCCAATGTACGAGATCTTGTAGCACTTACCAATGAGGCCCTATCGATTAGTATTACGCAGAAGAAATCAATTATAGACACTAATATAATTAGATCTACTCTTCATAGACAAACTTGGGATTTGCGATCCCAGGTAAGATCGGTTCAGGATCATGGGATCCTTTTCTATCAGATAGGAAGGGCTGTTGCACAAAATGGCCATGAACCTCCCTTGGATTTTTGA

mRNA sequence

ATGACTCCTAGAGAATTACCAAAATACGAAGTTCTCTTCTCCTTAGCACAAGCACTAAAATCATATTCAGGATTCGAAGGAATACCGTACTGGGGAGTTGTTAACATACAATTTTACAGCCAGAACAAGATCCATTTTGTATCATATCTAAGGGATTCCTGGGTTCGGGCCGAAGAAGCAATGTCACTCGATCATTATCAAATCGACTGCAATCTTTTTCTGTTCGTGAGGATCCCAACAGAGCGCCTTCTACTTCTAGAGATGATCATAGAAAATGTGAAATATTTGATAGGATCCGTTTCGGGAACTAATGGGGGTTCGTGCTTTAGCACTTTGATTTCCCAGAGTTTTTATGTGTTTCCACACCCCTTCGAGACCCCGAAAAATGAACAACTTTTCTTCGGAACACATACAAGATTCTTCATTGCAAAAAGGATAATGGTAACCCCACCATTAACTACTTCATTTATGAATTTCATACACTTCTCAGATCAGGCTAGGCGCCTCTCCAGCGGAGCTGGGCGCCGGGGCCCTGGATGCGCTAGCGATCAGCACATAGGGGGGTGGGTTGCCCGGGTTTCTCGGCCTGGTATCCTGCACCTCGCGTTCATGATATCTACATTCAACTGCGCCCCGGAGACACGTTTTCTTATTGATGATAGTGACGATATTGATGATAGTGGCGATATTGATGATAGTGACGATATCGACCGTGACCTTGATACGGAGCTGGAGCTTTTAACTATGATGAATGCGCTAACTATGGATATGATGCCGGAAATAGACCGATTTTATATCACCCTTCAATTCAAATTAACAAAAGCAATGTCTCCTTGCATAATATGGATTCCAAACATTCATGATTTGGATGTGAATGAGTCGAATTACTTATCCCTTGGTCTATTAGTGAACTATCTCTCCAGGGATTGTGAAAGATGTTCCACTAGAAATATTCTTGTTATTGCTTCGACCCATATTCCCCAAAAAGTGGATCCCGCTCTAATAGCTCCGAATAAATTAAATACATGCATTAAAATACGAAGGCTTCTTATTTCACAACAACGAAAGCACTTTTTCACTCTTTCATATACTAGGGGATTTCACTTGGAAAAGAAAATGTTCCATACTAATGGATTCGGTTCCATAACCATGGGTTCCAATGTACGAGATCTTGTAGCACTTACCAATGAGGCCCTATCGATTAGTATTACGCAGAAGAAATCAATTATAGACACTAATATAATTAGATCTACTCTTCATAGACAAACTTGGGATTTGCGATCCCAGGTAAGATCGGTTCAGGATCATGGGATCCTTTTCTATCAGATAGGAAGGGCTGTTGCACAAAATGGCCATGAACCTCCCTTGGATTTTTGA

Coding sequence (CDS)

ATGACTCCTAGAGAATTACCAAAATACGAAGTTCTCTTCTCCTTAGCACAAGCACTAAAATCATATTCAGGATTCGAAGGAATACCGTACTGGGGAGTTGTTAACATACAATTTTACAGCCAGAACAAGATCCATTTTGTATCATATCTAAGGGATTCCTGGGTTCGGGCCGAAGAAGCAATGTCACTCGATCATTATCAAATCGACTGCAATCTTTTTCTGTTCGTGAGGATCCCAACAGAGCGCCTTCTACTTCTAGAGATGATCATAGAAAATGTGAAATATTTGATAGGATCCGTTTCGGGAACTAATGGGGGTTCGTGCTTTAGCACTTTGATTTCCCAGAGTTTTTATGTGTTTCCACACCCCTTCGAGACCCCGAAAAATGAACAACTTTTCTTCGGAACACATACAAGATTCTTCATTGCAAAAAGGATAATGGTAACCCCACCATTAACTACTTCATTTATGAATTTCATACACTTCTCAGATCAGGCTAGGCGCCTCTCCAGCGGAGCTGGGCGCCGGGGCCCTGGATGCGCTAGCGATCAGCACATAGGGGGGTGGGTTGCCCGGGTTTCTCGGCCTGGTATCCTGCACCTCGCGTTCATGATATCTACATTCAACTGCGCCCCGGAGACACGTTTTCTTATTGATGATAGTGACGATATTGATGATAGTGGCGATATTGATGATAGTGACGATATCGACCGTGACCTTGATACGGAGCTGGAGCTTTTAACTATGATGAATGCGCTAACTATGGATATGATGCCGGAAATAGACCGATTTTATATCACCCTTCAATTCAAATTAACAAAAGCAATGTCTCCTTGCATAATATGGATTCCAAACATTCATGATTTGGATGTGAATGAGTCGAATTACTTATCCCTTGGTCTATTAGTGAACTATCTCTCCAGGGATTGTGAAAGATGTTCCACTAGAAATATTCTTGTTATTGCTTCGACCCATATTCCCCAAAAAGTGGATCCCGCTCTAATAGCTCCGAATAAATTAAATACATGCATTAAAATACGAAGGCTTCTTATTTCACAACAACGAAAGCACTTTTTCACTCTTTCATATACTAGGGGATTTCACTTGGAAAAGAAAATGTTCCATACTAATGGATTCGGTTCCATAACCATGGGTTCCAATGTACGAGATCTTGTAGCACTTACCAATGAGGCCCTATCGATTAGTATTACGCAGAAGAAATCAATTATAGACACTAATATAATTAGATCTACTCTTCATAGACAAACTTGGGATTTGCGATCCCAGGTAAGATCGGTTCAGGATCATGGGATCCTTTTCTATCAGATAGGAAGGGCTGTTGCACAAAATGGCCATGAACCTCCCTTGGATTTTTGA

Protein sequence

MTPRELPKYEVLFSLAQALKSYSGFEGIPYWGVVNIQFYSQNKIHFVSYLRDSWVRAEEAMSLDHYQIDCNLFLFVRIPTERLLLLEMIIENVKYLIGSVSGTNGGSCFSTLISQSFYVFPHPFETPKNEQLFFGTHTRFFIAKRIMVTPPLTTSFMNFIHFSDQARRLSSGAGRRGPGCASDQHIGGWVARVSRPGILHLAFMISTFNCAPETRFLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFKLTKAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTCIKIRRLLISQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNIIRSTLHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNGHEPPLDF

Homology

[Close]

BLAST of Clc11G07950 vs. NCBI nr
Match: YP_010131137.1 (hypothetical protein RF2 [Benincasa hispida] >YP_010131154.1 hypothetical protein RF2 [Benincasa hispida] >QPZ75785.1 hypothetical protein RF2 [Benincasa hispida] >QPZ75802.1 hypothetical protein RF2 [Benincasa hispida] >QSQ72354.1 Ycf2 protein [Benincasa hispida] >QSQ72372.1 Ycf2 protein [Benincasa hispida])

HSP 1 Score: 452.6 bits (1163), Expect = 4.1e-123
Identity = 232/237 (97.89%), Postives = 233/237 (98.31%), Query Frame = 0


Query: 214  TRFLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFKLT 273
            T FLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQF+L 
Sbjct: 1672 TGFLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELA 1731

Query: 274  KAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPA 333
            KAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPA
Sbjct: 1732 KAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPA 1791

Query: 334  LIAPNKLNTCIKIRRLLISQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVA 393
            LIAPNKLNTCIKIRRLLI QQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVA
Sbjct: 1792 LIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVA 1851

Query: 394  LTNEALSISITQKKSIIDTNIIRSTLHRQTWDLRSQVRSVQDHGILFYQIGRAVAQN 451
            LTNEALSISITQKKSIIDTNIIRS LHRQTWDLRSQVRSVQDHGILFYQIGRAVAQN
Sbjct: 1852 LTNEALSISITQKKSIIDTNIIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQN 1908

[Close]

BLAST of Clc11G07950 vs. NCBI nr
Match: YP_009420838.1 (Ycf2 [Citrullus colocynthis] >YP_009420857.1 Ycf2 [Citrullus colocynthis] >YP_009431686.1 Ycf2 [Citrullus rehmii] >YP_009431705.1 Ycf2 [Citrullus rehmii] >ASP44531.1 Ycf2 [Citrullus colocynthis] >ASP44534.1 Ycf2 [Citrullus colocynthis] >ASY96311.1 Ycf2 [Citrullus rehmii] >ASY96314.1 Ycf2 [Citrullus rehmii])

HSP 1 Score: 452.6 bits (1163), Expect = 4.1e-123
Identity = 233/250 (93.20%), Postives = 237/250 (94.80%), Query Frame = 0


Query: 201  LAFMISTFNCAPETRFLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPE 260
            +   ++TF       FLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPE
Sbjct: 1655 ITVFLNTFLDNKPEGFLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPE 1714

Query: 261  IDRFYITLQFKLTKAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILV 320
            IDRFYITLQF+L KAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILV
Sbjct: 1715 IDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILV 1774

Query: 321  IASTHIPQKVDPALIAPNKLNTCIKIRRLLISQQRKHFFTLSYTRGFHLEKKMFHTNGFG 380
            IASTHIPQKVDPALIAPNKLNTCIKIRRLLI QQRKHFFTLSYTRGFHLEKKMFHTNGFG
Sbjct: 1775 IASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFG 1834

Query: 381  SITMGSNVRDLVALTNEALSISITQKKSIIDTNIIRSTLHRQTWDLRSQVRSVQDHGILF 440
            SITMGSNVRDLVALTNEALSISITQKKSIIDTNIIRS LHRQTWDLRSQVRSVQDHGILF
Sbjct: 1835 SITMGSNVRDLVALTNEALSISITQKKSIIDTNIIRSALHRQTWDLRSQVRSVQDHGILF 1894

Query: 441  YQIGRAVAQN 451
            YQIGRAVAQN
Sbjct: 1895 YQIGRAVAQN 1904

[Close]

BLAST of Clc11G07950 vs. NCBI nr
Match: QZL38725.1 (Ycf2 protein [Citrullus ecirrhosus] >QZL38746.1 Ycf2 protein [Citrullus ecirrhosus])

HSP 1 Score: 452.6 bits (1163), Expect = 4.1e-123
Identity = 233/250 (93.20%), Postives = 237/250 (94.80%), Query Frame = 0


Query: 201  LAFMISTFNCAPETRFLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPE 260
            +   ++TF       FLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPE
Sbjct: 1655 ITVFLNTFLDNKPEGFLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPE 1714

Query: 261  IDRFYITLQFKLTKAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILV 320
            IDRFYITLQF+L KAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILV
Sbjct: 1715 IDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILV 1774

Query: 321  IASTHIPQKVDPALIAPNKLNTCIKIRRLLISQQRKHFFTLSYTRGFHLEKKMFHTNGFG 380
            IASTHIPQKVDPALIAPNKLNTCIKIRRLLI QQRKHFFTLSYTRGFHLEKKMFHTNGFG
Sbjct: 1775 IASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFG 1834

Query: 381  SITMGSNVRDLVALTNEALSISITQKKSIIDTNIIRSTLHRQTWDLRSQVRSVQDHGILF 440
            SITMGSNVRDLVALTNEALSISITQKKSIIDTNIIRS LHRQTWDLRSQVRSVQDHGILF
Sbjct: 1835 SITMGSNVRDLVALTNEALSISITQKKSIIDTNIIRSALHRQTWDLRSQVRSVQDHGILF 1894

Query: 441  YQIGRAVAQN 451
            YQIGRAVAQN
Sbjct: 1895 YQIGRAVAQN 1904

[Close]

BLAST of Clc11G07950 vs. NCBI nr
Match: YP_009326033.1 (Ycf2 [Citrullus lanatus] >YP_009326052.1 Ycf2 [Citrullus lanatus] >YP_009348075.1 Ycf2 [Citrullus mucosospermus] >YP_009348094.1 Ycf2 [Citrullus mucosospermus] >YP_009431600.1 Ycf2 [Citrullus amarus] >YP_009431619.1 Ycf2 [Citrullus amarus] >APW82506.1 Ycf2 [Citrullus lanatus subsp. vulgaris] >APD52524.1 Ycf2 [Citrullus lanatus] >APD52544.1 Ycf2 [Citrullus lanatus] >APW82525.1 Ycf2 [Citrullus lanatus subsp. vulgaris] >APW82591.1 Ycf2 [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 452.6 bits (1163), Expect = 4.1e-123
Identity = 233/250 (93.20%), Postives = 237/250 (94.80%), Query Frame = 0


Query: 201  LAFMISTFNCAPETRFLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPE 260
            +   ++TF       FLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPE
Sbjct: 1655 ITVFLNTFLDNKPEGFLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPE 1714

Query: 261  IDRFYITLQFKLTKAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILV 320
            IDRFYITLQF+L KAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILV
Sbjct: 1715 IDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILV 1774

Query: 321  IASTHIPQKVDPALIAPNKLNTCIKIRRLLISQQRKHFFTLSYTRGFHLEKKMFHTNGFG 380
            IASTHIPQKVDPALIAPNKLNTCIKIRRLLI QQRKHFFTLSYTRGFHLEKKMFHTNGFG
Sbjct: 1775 IASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFG 1834

Query: 381  SITMGSNVRDLVALTNEALSISITQKKSIIDTNIIRSTLHRQTWDLRSQVRSVQDHGILF 440
            SITMGSNVRDLVALTNEALSISITQKKSIIDTNIIRS LHRQTWDLRSQVRSVQDHGILF
Sbjct: 1835 SITMGSNVRDLVALTNEALSISITQKKSIIDTNIIRSALHRQTWDLRSQVRSVQDHGILF 1894

Query: 441  YQIGRAVAQN 451
            YQIGRAVAQN
Sbjct: 1895 YQIGRAVAQN 1904

[Close]

BLAST of Clc11G07950 vs. NCBI nr
Match: QIT04093.1 (Ycf2 protein [Luffa aegyptiaca] >QIT04110.1 Ycf2 protein [Luffa aegyptiaca] >QKX48604.1 hypothetical chloroplast RF21 [Luffa aegyptiaca] >QKX48623.1 hypothetical chloroplast RF21 [Luffa aegyptiaca])

HSP 1 Score: 451.1 bits (1159), Expect = 1.2e-122
Identity = 231/235 (98.30%), Postives = 232/235 (98.72%), Query Frame = 0


Query: 216  FLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFKLTKA 275
            FLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQF+L KA
Sbjct: 1672 FLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKA 1731

Query: 276  MSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALI 335
            MSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALI
Sbjct: 1732 MSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALI 1791

Query: 336  APNKLNTCIKIRRLLISQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALT 395
            APNKLNTCIKIRRLLI QQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALT
Sbjct: 1792 APNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALT 1851

Query: 396  NEALSISITQKKSIIDTNIIRSTLHRQTWDLRSQVRSVQDHGILFYQIGRAVAQN 451
            NEALSISITQKKSIIDTNIIRS LHRQTWDLRSQVRSVQDHGILFYQIGRAVAQN
Sbjct: 1852 NEALSISITQKKSIIDTNIIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQN 1906

[Close]

BLAST of Clc11G07950 vs. ExPASy Swiss-Prot
Match: Q09WV7 (Protein Ycf2 OS=Morus indica OX=248361 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 3.3e-120
Identity = 221/227 (97.36%), Postives = 222/227 (97.80%), Query Frame = 0


Query: 224  IDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFKLTKAMSPCIIWI 283
            IDDS DIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQF+L KAMSPCIIWI
Sbjct: 1683 IDDSDDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMSPCIIWI 1742

Query: 284  PNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTC 343
            PNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTC
Sbjct: 1743 PNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAPNKLNTC 1802

Query: 344  IKIRRLLISQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALSISI 403
            IKIRRLLI QQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALSISI
Sbjct: 1803 IKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNEALSISI 1862

Query: 404  TQKKSIIDTNIIRSTLHRQTWDLRSQVRSVQDHGILFYQIGRAVAQN 451
            TQKKSIIDTNIIRS  HRQTWDLRSQVRSVQDHGILFYQIGRAVAQN
Sbjct: 1863 TQKKSIIDTNIIRSAFHRQTWDLRSQVRSVQDHGILFYQIGRAVAQN 1909

[Close]

BLAST of Clc11G07950 vs. ExPASy Swiss-Prot
Match: Q0ZIV6 (Protein Ycf2 OS=Vitis vinifera OX=29760 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 1.3e-119
Identity = 223/233 (95.71%), Postives = 224/233 (96.14%), Query Frame = 0


Query: 218  IDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFKLTKAMS 277
            ID SDDID S DID SDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQF+L KAMS
Sbjct: 1692 IDASDDIDASDDIDASDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELAKAMS 1751

Query: 278  PCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAP 337
            PCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAP
Sbjct: 1752 PCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALIAP 1811

Query: 338  NKLNTCIKIRRLLISQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALTNE 397
            NKLNTCIKIRRLLI QQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSN RDLVALTNE
Sbjct: 1812 NKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNARDLVALTNE 1871

Query: 398  ALSISITQKKSIIDTNIIRSTLHRQTWDLRSQVRSVQDHGILFYQIGRAVAQN 451
            ALSISITQKKSIIDTN IRS LHRQTWDLRSQVRSVQDHGILFYQIGRAVAQN
Sbjct: 1872 ALSISITQKKSIIDTNAIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQN 1924

[Close]

BLAST of Clc11G07950 vs. ExPASy Swiss-Prot
Match: Q14F97 (Protein Ycf2 OS=Populus alba OX=43335 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 6.3e-119
Identity = 221/235 (94.04%), Postives = 224/235 (95.32%), Query Frame = 0


Query: 216  FLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFKLTKA 275
            FLIDD DDIDDS DID SDDIDRDLDTELELLT MN LTMDMMPEIDRFYITLQF+L KA
Sbjct: 1672 FLIDDRDDIDDSDDIDVSDDIDRDLDTELELLTRMNVLTMDMMPEIDRFYITLQFELAKA 1731

Query: 276  MSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALI 335
            MSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALI
Sbjct: 1732 MSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALI 1791

Query: 336  APNKLNTCIKIRRLLISQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALT 395
            APNKLNTCIKIRRLLI QQRKH FTLSY+RGFHLEKKMFHT  FGS+TMGSNVRDLVALT
Sbjct: 1792 APNKLNTCIKIRRLLIPQQRKHVFTLSYSRGFHLEKKMFHTKRFGSVTMGSNVRDLVALT 1851

Query: 396  NEALSISITQKKSIIDTNIIRSTLHRQTWDLRSQVRSVQDHGILFYQIGRAVAQN 451
            NEALSISITQKKSIIDTNIIRS LHRQTWDLRSQVRSVQDHGILFYQIGRAVAQN
Sbjct: 1852 NEALSISITQKKSIIDTNIIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQN 1906

[Close]

BLAST of Clc11G07950 vs. ExPASy Swiss-Prot
Match: A4GYV4 (Protein Ycf2 OS=Populus trichocarpa OX=3694 GN=ycf2-1 PE=3 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 6.3e-119
Identity = 221/235 (94.04%), Postives = 224/235 (95.32%), Query Frame = 0


Query: 216  FLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFKLTKA 275
            FLIDD DDIDDS DID SDDIDRDLDTELELLT MN LTMDMMPEIDRFYITLQF+L KA
Sbjct: 1675 FLIDDRDDIDDSDDIDVSDDIDRDLDTELELLTRMNVLTMDMMPEIDRFYITLQFELAKA 1734

Query: 276  MSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALI 335
            MSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALI
Sbjct: 1735 MSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALI 1794

Query: 336  APNKLNTCIKIRRLLISQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALT 395
            APNKLNTCIKIRRLLI QQRKH FTLSY+RGFHLEKKMFHT  FGS+TMGSNVRDLVALT
Sbjct: 1795 APNKLNTCIKIRRLLIPQQRKHVFTLSYSRGFHLEKKMFHTKRFGSVTMGSNVRDLVALT 1854

Query: 396  NEALSISITQKKSIIDTNIIRSTLHRQTWDLRSQVRSVQDHGILFYQIGRAVAQN 451
            NEALSISITQKKSIIDTNIIRS LHRQTWDLRSQVRSVQDHGILFYQIGRAVAQN
Sbjct: 1855 NEALSISITQKKSIIDTNIIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQN 1909

[Close]

BLAST of Clc11G07950 vs. ExPASy Swiss-Prot
Match: Q49KT6 (Protein Ycf2 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 1.1e-118
Identity = 221/235 (94.04%), Postives = 227/235 (96.60%), Query Frame = 0


Query: 216  FLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFKLTKA 275
            FLIDD  DI+DS DI+DSD+IDRDLDTELELLT MNALTMDMMPEIDRFYITLQF+L KA
Sbjct: 1671 FLIDDI-DIEDSDDIEDSDNIDRDLDTELELLTRMNALTMDMMPEIDRFYITLQFELAKA 1730

Query: 276  MSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALI 335
            MSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCST+NILVIASTHIPQKVDPALI
Sbjct: 1731 MSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTQNILVIASTHIPQKVDPALI 1790

Query: 336  APNKLNTCIKIRRLLISQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALT 395
            APNKLNTCIKIRRLLI QQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALT
Sbjct: 1791 APNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALT 1850

Query: 396  NEALSISITQKKSIIDTNIIRSTLHRQTWDLRSQVRSVQDHGILFYQIGRAVAQN 451
            NEALSISITQKKSI+DTN IRS LHRQTWDLRSQVRSVQDHGILFYQIGRAVAQN
Sbjct: 1851 NEALSISITQKKSILDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQN 1904

[Close]

BLAST of Clc11G07950 vs. ExPASy TrEMBL
Match: A0A343F2F1 (Protein Ycf2 OS=Citrullus colocynthis OX=252529 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 2.0e-123
Identity = 233/250 (93.20%), Postives = 237/250 (94.80%), Query Frame = 0


Query: 201  LAFMISTFNCAPETRFLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPE 260
            +   ++TF       FLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPE
Sbjct: 1655 ITVFLNTFLDNKPEGFLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPE 1714

Query: 261  IDRFYITLQFKLTKAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILV 320
            IDRFYITLQF+L KAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILV
Sbjct: 1715 IDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILV 1774

Query: 321  IASTHIPQKVDPALIAPNKLNTCIKIRRLLISQQRKHFFTLSYTRGFHLEKKMFHTNGFG 380
            IASTHIPQKVDPALIAPNKLNTCIKIRRLLI QQRKHFFTLSYTRGFHLEKKMFHTNGFG
Sbjct: 1775 IASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFG 1834

Query: 381  SITMGSNVRDLVALTNEALSISITQKKSIIDTNIIRSTLHRQTWDLRSQVRSVQDHGILF 440
            SITMGSNVRDLVALTNEALSISITQKKSIIDTNIIRS LHRQTWDLRSQVRSVQDHGILF
Sbjct: 1835 SITMGSNVRDLVALTNEALSISITQKKSIIDTNIIRSALHRQTWDLRSQVRSVQDHGILF 1894

Query: 441  YQIGRAVAQN 451
            YQIGRAVAQN
Sbjct: 1895 YQIGRAVAQN 1904

[Close]

BLAST of Clc11G07950 vs. ExPASy TrEMBL
Match: A0A7T3QNV9 (Uncharacterized protein OS=Benincasa hispida OX=102211 GN=ycf2 PE=4 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 2.0e-123
Identity = 232/237 (97.89%), Postives = 233/237 (98.31%), Query Frame = 0


Query: 214  TRFLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFKLT 273
            T FLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQF+L 
Sbjct: 1672 TGFLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFELA 1731

Query: 274  KAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPA 333
            KAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPA
Sbjct: 1732 KAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPA 1791

Query: 334  LIAPNKLNTCIKIRRLLISQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVA 393
            LIAPNKLNTCIKIRRLLI QQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVA
Sbjct: 1792 LIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVA 1851

Query: 394  LTNEALSISITQKKSIIDTNIIRSTLHRQTWDLRSQVRSVQDHGILFYQIGRAVAQN 451
            LTNEALSISITQKKSIIDTNIIRS LHRQTWDLRSQVRSVQDHGILFYQIGRAVAQN
Sbjct: 1852 LTNEALSISITQKKSIIDTNIIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQN 1908

[Close]

BLAST of Clc11G07950 vs. ExPASy TrEMBL
Match: A0A249RXF2 (Protein Ycf2 OS=Citrullus rehmii OX=260675 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 2.0e-123
Identity = 233/250 (93.20%), Postives = 237/250 (94.80%), Query Frame = 0


Query: 201  LAFMISTFNCAPETRFLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPE 260
            +   ++TF       FLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPE
Sbjct: 1655 ITVFLNTFLDNKPEGFLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPE 1714

Query: 261  IDRFYITLQFKLTKAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILV 320
            IDRFYITLQF+L KAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILV
Sbjct: 1715 IDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILV 1774

Query: 321  IASTHIPQKVDPALIAPNKLNTCIKIRRLLISQQRKHFFTLSYTRGFHLEKKMFHTNGFG 380
            IASTHIPQKVDPALIAPNKLNTCIKIRRLLI QQRKHFFTLSYTRGFHLEKKMFHTNGFG
Sbjct: 1775 IASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFG 1834

Query: 381  SITMGSNVRDLVALTNEALSISITQKKSIIDTNIIRSTLHRQTWDLRSQVRSVQDHGILF 440
            SITMGSNVRDLVALTNEALSISITQKKSIIDTNIIRS LHRQTWDLRSQVRSVQDHGILF
Sbjct: 1835 SITMGSNVRDLVALTNEALSISITQKKSIIDTNIIRSALHRQTWDLRSQVRSVQDHGILF 1894

Query: 441  YQIGRAVAQN 451
            YQIGRAVAQN
Sbjct: 1895 YQIGRAVAQN 1904

[Close]

BLAST of Clc11G07950 vs. ExPASy TrEMBL
Match: A0A1P8LED5 (Protein Ycf2 OS=Citrullus mucosospermus OX=519315 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 2.0e-123
Identity = 233/250 (93.20%), Postives = 237/250 (94.80%), Query Frame = 0


Query: 201  LAFMISTFNCAPETRFLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPE 260
            +   ++TF       FLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPE
Sbjct: 1655 ITVFLNTFLDNKPEGFLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPE 1714

Query: 261  IDRFYITLQFKLTKAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILV 320
            IDRFYITLQF+L KAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILV
Sbjct: 1715 IDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILV 1774

Query: 321  IASTHIPQKVDPALIAPNKLNTCIKIRRLLISQQRKHFFTLSYTRGFHLEKKMFHTNGFG 380
            IASTHIPQKVDPALIAPNKLNTCIKIRRLLI QQRKHFFTLSYTRGFHLEKKMFHTNGFG
Sbjct: 1775 IASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFG 1834

Query: 381  SITMGSNVRDLVALTNEALSISITQKKSIIDTNIIRSTLHRQTWDLRSQVRSVQDHGILF 440
            SITMGSNVRDLVALTNEALSISITQKKSIIDTNIIRS LHRQTWDLRSQVRSVQDHGILF
Sbjct: 1835 SITMGSNVRDLVALTNEALSISITQKKSIIDTNIIRSALHRQTWDLRSQVRSVQDHGILF 1894

Query: 441  YQIGRAVAQN 451
            YQIGRAVAQN
Sbjct: 1895 YQIGRAVAQN 1904

[Close]

BLAST of Clc11G07950 vs. ExPASy TrEMBL
Match: A0A343A8H4 (Protein Ycf2 OS=Citrullus lanatus OX=3654 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 2.0e-123
Identity = 233/250 (93.20%), Postives = 237/250 (94.80%), Query Frame = 0


Query: 201  LAFMISTFNCAPETRFLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPE 260
            +   ++TF       FLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPE
Sbjct: 1655 ITVFLNTFLDNKPEGFLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPE 1714

Query: 261  IDRFYITLQFKLTKAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILV 320
            IDRFYITLQF+L KAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILV
Sbjct: 1715 IDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILV 1774

Query: 321  IASTHIPQKVDPALIAPNKLNTCIKIRRLLISQQRKHFFTLSYTRGFHLEKKMFHTNGFG 380
            IASTHIPQKVDPALIAPNKLNTCIKIRRLLI QQRKHFFTLSYTRGFHLEKKMFHTNGFG
Sbjct: 1775 IASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFG 1834

Query: 381  SITMGSNVRDLVALTNEALSISITQKKSIIDTNIIRSTLHRQTWDLRSQVRSVQDHGILF 440
            SITMGSNVRDLVALTNEALSISITQKKSIIDTNIIRS LHRQTWDLRSQVRSVQDHGILF
Sbjct: 1835 SITMGSNVRDLVALTNEALSISITQKKSIIDTNIIRSALHRQTWDLRSQVRSVQDHGILF 1894

Query: 441  YQIGRAVAQN 451
            YQIGRAVAQN
Sbjct: 1895 YQIGRAVAQN 1904

[Close]

BLAST of Clc11G07950 vs. TAIR 10
Match: ATCG00860.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 412.9 bits (1060), Expect = 3.3e-115
Identity = 216/235 (91.91%), Postives = 222/235 (94.47%), Query Frame = 0


Query: 216  FLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFKLTKA 275
            F IDD  DIDDS DID S+DIDR+LDTELELLTMMNALTMDMM EIDRFYITLQF+L KA
Sbjct: 1685 FFIDDI-DIDDSDDIDASNDIDRELDTELELLTMMNALTMDMMLEIDRFYITLQFELAKA 1744

Query: 276  MSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALI 335
            MSPCIIWIPNIHDLDVNES+YL+LGLLVN LSRDCERCSTRNILVIASTHIPQKVDPALI
Sbjct: 1745 MSPCIIWIPNIHDLDVNESSYLALGLLVNSLSRDCERCSTRNILVIASTHIPQKVDPALI 1804

Query: 336  APNKLNTCIKIRRLLISQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALT 395
            APNKLNTCIKIRRLLI QQRKHFFTLSYTRGFHLEKKMFHTNGF SITMGS+ RDLVALT
Sbjct: 1805 APNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALT 1864

Query: 396  NEALSISITQKKSIIDTNIIRSTLHRQTWDLRSQVRSVQDHGILFYQIGRAVAQN 451
            NEALSISITQKKSIIDTN IRS LHRQTWDLRSQVRSVQDHGILFYQIGRAVAQN
Sbjct: 1865 NEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQN 1918

[Close]

BLAST of Clc11G07950 vs. TAIR 10
Match: ATCG01280.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 412.9 bits (1060), Expect = 3.3e-115
Identity = 216/235 (91.91%), Postives = 222/235 (94.47%), Query Frame = 0


Query: 216  FLIDDSDDIDDSGDIDDSDDIDRDLDTELELLTMMNALTMDMMPEIDRFYITLQFKLTKA 275
            F IDD  DIDDS DID S+DIDR+LDTELELLTMMNALTMDMM EIDRFYITLQF+L KA
Sbjct: 1685 FFIDDI-DIDDSDDIDASNDIDRELDTELELLTMMNALTMDMMLEIDRFYITLQFELAKA 1744

Query: 276  MSPCIIWIPNIHDLDVNESNYLSLGLLVNYLSRDCERCSTRNILVIASTHIPQKVDPALI 335
            MSPCIIWIPNIHDLDVNES+YL+LGLLVN LSRDCERCSTRNILVIASTHIPQKVDPALI
Sbjct: 1745 MSPCIIWIPNIHDLDVNESSYLALGLLVNSLSRDCERCSTRNILVIASTHIPQKVDPALI 1804

Query: 336  APNKLNTCIKIRRLLISQQRKHFFTLSYTRGFHLEKKMFHTNGFGSITMGSNVRDLVALT 395
            APNKLNTCIKIRRLLI QQRKHFFTLSYTRGFHLEKKMFHTNGF SITMGS+ RDLVALT
Sbjct: 1805 APNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALT 1864

Query: 396  NEALSISITQKKSIIDTNIIRSTLHRQTWDLRSQVRSVQDHGILFYQIGRAVAQN 451
            NEALSISITQKKSIIDTN IRS LHRQTWDLRSQVRSVQDHGILFYQIGRAVAQN
Sbjct: 1865 NEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQN 1918

The following BLAST results are available for this feature:

BLAST of Clc11G07950 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_010131137.1	4.1e-123	97.89	hypothetical protein RF2 [Benincasa hispida] >YP_010131154.1 hypothetical protei...	[more]
YP_009420838.1	4.1e-123	93.20	Ycf2 [Citrullus colocynthis] >YP_009420857.1 Ycf2 [Citrullus colocynthis] >YP_00...	[more]
QZL38725.1	4.1e-123	93.20	Ycf2 protein [Citrullus ecirrhosus] >QZL38746.1 Ycf2 protein [Citrullus ecirrhos...	[more]
YP_009326033.1	4.1e-123	93.20	Ycf2 [Citrullus lanatus] >YP_009326052.1 Ycf2 [Citrullus lanatus] >YP_009348075....	[more]
QIT04093.1	1.2e-122	98.30	Ycf2 protein [Luffa aegyptiaca] >QIT04110.1 Ycf2 protein [Luffa aegyptiaca] >QKX...	[more]

BLAST of Clc11G07950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q09WV7	3.3e-120	97.36	Protein Ycf2 OS=Morus indica OX=248361 GN=ycf2-A PE=3 SV=1	[more]
Q0ZIV6	1.3e-119	95.71	Protein Ycf2 OS=Vitis vinifera OX=29760 GN=ycf2-A PE=3 SV=1	[more]
Q14F97	6.3e-119	94.04	Protein Ycf2 OS=Populus alba OX=43335 GN=ycf2-A PE=3 SV=1	[more]
A4GYV4	6.3e-119	94.04	Protein Ycf2 OS=Populus trichocarpa OX=3694 GN=ycf2-1 PE=3 SV=1	[more]
Q49KT6	1.1e-118	94.04	Protein Ycf2 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ycf2-A PE=3 SV=1	[more]

BLAST of Clc11G07950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A343F2F1	2.0e-123	93.20	Protein Ycf2 OS=Citrullus colocynthis OX=252529 GN=ycf2 PE=3 SV=1	[more]
A0A7T3QNV9	2.0e-123	97.89	Uncharacterized protein OS=Benincasa hispida OX=102211 GN=ycf2 PE=4 SV=1	[more]
A0A249RXF2	2.0e-123	93.20	Protein Ycf2 OS=Citrullus rehmii OX=260675 GN=ycf2 PE=3 SV=1	[more]
A0A1P8LED5	2.0e-123	93.20	Protein Ycf2 OS=Citrullus mucosospermus OX=519315 GN=ycf2 PE=3 SV=1	[more]
A0A343A8H4	2.0e-123	93.20	Protein Ycf2 OS=Citrullus lanatus OX=3654 GN=ycf2 PE=3 SV=1	[more]

BLAST of Clc11G07950 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00860.1	3.3e-115	91.91	Chloroplast Ycf2;ATPase, AAA type, core	[more]
ATCG01280.1	3.3e-115	91.91	Chloroplast Ycf2;ATPase, AAA type, core	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 270..347 e-value: 1.6E-4 score: 22.1
None	No IPR available	GENE3D	1.10.8.60		coord: 350..417 e-value: 8.9E-9 score: 37.0
None	No IPR available	PANTHER	PTHR33078	PROTEIN YCF2-RELATED	coord: 217..450
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 269..349 e-value: 8.9E-9 score: 37.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 266..421
IPR008543	Uncharacterised protein family Ycf2	PANTHER	PTHR33078:SF22	PROTEIN YCF2	coord: 217..450

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc11G07950.2	Clc11G07950.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity