Clc11G07620 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCATAACGGCCCCCGGATACAGTAACGATCATAGCGATCTCCTCTGGTACCTACTGGTACGTCAGGATCCAATTGGTCATGAACATCGTAAGGTGCAGCTCTTCGCAAATCCCAGCATACCCCTGGTTGGGATGGGTAGGCCCACCACTTCACTTTCATTTAGGCCCGGGCCAAGTCAGTGGGGGGACCCTGTCGGGCTCCTTCCCCCCCCCCAAAAAAAAAACAAACTGTACGTGAGAGTTACCCTTCATACAGCTCGAATCATTCTCAGATGCCCCGAGAGGCATCCTTTCCTTGTTTGTTGGGTTGGTTCACGCGCGCGCAAACGAGCACCGACCGCAACAGCAGGGAACTATGACCAATAGAGTCAGACACTTAGCTACATCCGCACGCATAGCTTATCAAAATTGTATAATAGCTAACCCTTGAAAGCGGACTGCTACAGTACTGATTTTATTTGGATTGCTTTCCTCCTTCTATACTACAGAAGGAATTGCTTTCCCTGGCTTTAGAGGTTTCAACTTGACTTTGATTAAATTAATTGGGCTATTATTCCCTTCTCATTTGATCTAATCTTTACTGTCCCCCGATTGTTTCATAGAGACAATCGGGAGATGGGATGGCCTATTACATGCGTGGTTAGAGCTTATCGAAAAGAAAGAAGTTCTTTTTTTAAGTTTAAGATTAACATAAAAATGGTAAAGTTAGGGCTCATCAATTTAATTAGGATCGGTCTTATGATGAAACAAAACAATTCATTGCATTGATCAAATCCAATATCAATAAACCATTTTACCTATACTCATTAGATAAATCGAATTTTTCGTTCCTGAATGTGCGGGCATTCCTCAGATAAGATTCTTTACTCAAAGCGAACATAAGCGGGGGTTCTTTCCCTTAGTCGATCTTGCTCTAGGGTGACTCAATAGCTTCCCATTAGTAGTTCCACTTCGACATCTCGGAGAAGTTCTAGCTTCCCTAAGGCTTACGAGAGACCAGAAGACCTCAGATGCGGGATTACCTGTTGATGCGGTAGATGAGGTTTTTGCTTTTCCTGTTAGAGAATGAGTTGTTAGCCTTACTGAATGCCCGAGGAATGGCATTCCATTGCAGTCATTTTATATGTATATGGTTACAATTATCTACGTTCCCAATGTGCTTATGATGTAGCACCAGGCGGACTGTTGGCTAGTGTGTATCATCTTACGAGAATCGAGTATGGTATAGATCAACCGGAAGAGGTATGCATAAAAGTATTTGTCGCAAGGATAAATCCTAGAATTCCGTCTGTTTTCTGGGTTTGGAAAAGTGGGAATTTCTTATGATAATCATCCACGTCTAAAGCGTATCTTAATGCCTGAAAGTTGGGTAGGATGGCCCTTACGTAAGGATTATATTACCTGTCCTGCATTTCATTACATTAAGTAAAAAGTCTCAAAATAGAGAATCAAGATAGATCACTATCTATCACATACCCCTATTATTCCCTTCTCATTTGATCTAATCTTTACTGTCCCCCGATTGTTTCATAGAGACAATCGGGAGATGGGATGGCCTATTACATGCGAGAAAGTTCGAAACAAGTGGGATTTTTTTGGAGATTGGATGCAGTTACTAATTCATGATCTGGCATGTACAGAATGAAAACTTCATTCTCGATTCTACGAGAATTTTTATGAAAGCCTTTCATTTGCTTCTCTTCGATGGAAGTTTTATTTTCCCAGAATGTATCCTAATTTTTGGCCTAATTCTTCTTCTGATGATCGATTCAACCTCTGATCAAAAAGATATACCTTGGTTATATTTCATCTCTTCAACAAGTTTAGTAATGAGCATAACGGCCCTATTGTTCCGATGGAGAGAAGAACCTATGATTAGCTTTTCGGGAAATTTCCAAACGAACAATTTCAACGAAATCTTTCAATTTCTTATTTTACTATGTTCAACTCTATGTATTCCTCTATCCGTAGAGTACATTGAATGTACAGAAATGGCTATAACAGAGTTTCTGTTATTCGTATTAACAGCTACTCTAGGAGGAATGTTTTTATGCGGTGCTAATGATTTAATAACTATCTTTGTAGCTCCAGAATGTTTCAGTTTATGCTCCTACCTATTATCTGGATATACCAAGAAAGATGTACGGTCTAATGAGGCTACTACGAAATATTTACTCATGGGTGGGGCAAGTTCTTCTATTCTGGTTTATGGTTTCTCTTGGCTATATGGTTCATCCGGGGGAGAGATCGAGCTTCAAGAAATAGTAAATGGTCACGAACTCTATTTATGAGTCATTTTTTCATTTCATTGGTCCTTATTTCTTATTTCAGCATATAGATTTAGGTGTAATCTATTAGTTTTTTCTTTTTTCTACCTATACCCTTTCTTTTTTTTTTCATAGGAATTCCGCATATTTTCACATCTAGGATTTACATATACAACATATATCACTGTCAAGAGTGAATTTTTTTTATTTCAATATTTTGAGGCAAAAGATTAGATTACAAACTTGAAAAAAAAGGATTGGGTTGCGCCTTTTTCTGGCCAGCGGCTACTGGAAATGGTCCAAGAATGTCCATTCCCCCATTGTGCGAAAGGCCAGGGACTCCCAATAGACTTTAAGGGCTCAGGTGGTTGTCTGGGCACGTTGGCAAATTTCTGGCACTGGTCACATTTGAAACTCCTTAGCATCTGTGCTTTTCCCCTTTACAGTTGAGGATATTCAACCCTTTCCCTTGTAAACTACTCGGGTTTTTGGCTTCGCCCCGATCCCCTCGTACCTTTACAGGGGACCCTATTGTTATTACACCTGTAAATCAGAATAAATGTTCTATCTGTAAAAGAGTATCTTCTCTTACTTACTCAATTCCATCTAGATGCCGCATAAAGAGAGAACTTTCTGGCAAGCTGCTCGACACAAAGAAAATAGATGAGATCTCCTCTCGCATATCGGTTGTGTGA ATGAGCATAACGGCCCCCGGATACAGTAACGATCATAGCGATCTCCTCTGGTACCTACTGGTACGTCAGGATCCAATTGGTCATGAACATCGTAAGGTGCAGCTCTTCGCAAATCCCAGCATACCCCTGGTTGGGATGGGTAGGCCCACCACTTCACTTTCATTTAGGCCCGGGCCAATCATTTTATATGTATATGGTTACAATTATCTACGTTCCCAATGTGCTTATGATGTAGCACCAGGCGGACTGTTGGCTAGTGTGTATCATCTTACGAGAATCGAGTATGGTATAGATCAACCGGAAGAGTTGAGGATATTCAACCCTTTCCCTTGTAAACTACTCGGGTTTTTGGCTTCGCCCCGATCCCCTCGTACCTTTACAGGGGACCCTATTGTTATTACACCTGTAAATCAGAATAAATGTTCTATCTGTAAAAGAGTATCTTCTCTTACTTACTCAATTCCATCTAGATGCCGCATAAAGAGAGAACTTTCTGGCAAGCTGCTCGACACAAAGAAAATAGATGAGATCTCCTCTCGCATATCGGTTGTGTGA ATGAGCATAACGGCCCCCGGATACAGTAACGATCATAGCGATCTCCTCTGGTACCTACTGGTACGTCAGGATCCAATTGGTCATGAACATCGTAAGGTGCAGCTCTTCGCAAATCCCAGCATACCCCTGGTTGGGATGGGTAGGCCCACCACTTCACTTTCATTTAGGCCCGGGCCAATCATTTTATATGTATATGGTTACAATTATCTACGTTCCCAATGTGCTTATGATGTAGCACCAGGCGGACTGTTGGCTAGTGTGTATCATCTTACGAGAATCGAGTATGGTATAGATCAACCGGAAGAGTTGAGGATATTCAACCCTTTCCCTTGTAAACTACTCGGGTTTTTGGCTTCGCCCCGATCCCCTCGTACCTTTACAGGGGACCCTATTGTTATTACACCTGTAAATCAGAATAAATGTTCTATCTGTAAAAGAGTATCTTCTCTTACTTACTCAATTCCATCTAGATGCCGCATAAAGAGAGAACTTTCTGGCAAGCTGCTCGACACAAAGAAAATAGATGAGATCTCCTCTCGCATATCGGTTGTGTGA MSITAPGYSNDHSDLLWYLLVRQDPIGHEHRKVQLFANPSIPLVGMGRPTTSLSFRPGPIILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEELRIFNPFPCKLLGFLASPRSPRTFTGDPIVITPVNQNKCSICKRVSSLTYSIPSRCRIKRELSGKLLDTKKIDEISSRISVV Homology
BLAST of Clc11G07620 vs. NCBI nr
Match: AWI73310.1 (NADH dehydrogenase 19 kDa subunit [Willughbeia edulis]) HSP 1 Score: 102.1 bits (253), Expect = 5.4e-18 Identity = 48/67 (71.64%), Postives = 53/67 (79.10%), Query Frame = 0
BLAST of Clc11G07620 vs. NCBI nr
Match: YP_009704890.1 (NADH-plastoquinone oxidoreductase subunit J [Abelia chinensis] >YP_009705662.1 NADH-plastoquinone oxidoreductase subunit J [Abelia x grandiflora] >QFQ36575.1 NADH-plastoquinone oxidoreductase subunit J [Abelia macrotera] >QAU08121.1 NdhJ, partial [Abelia chinensis] >QCP68094.1 NADH dehydrogenase subunit J [Abelia chinensis] >QFQ33776.1 NADH-plastoquinone oxidoreductase subunit J [Abelia chinensis] >QFQ36426.1 NADH-plastoquinone oxidoreductase subunit J [Abelia x grandiflora]) HSP 1 Score: 101.3 bits (251), Expect = 9.2e-18 Identity = 51/82 (62.20%), Postives = 58/82 (70.73%), Query Frame = 0
BLAST of Clc11G07620 vs. NCBI nr
Match: QFQ36651.1 (NADH-plastoquinone oxidoreductase subunit J [Abelia uniflora]) HSP 1 Score: 101.3 bits (251), Expect = 9.2e-18 Identity = 51/82 (62.20%), Postives = 58/82 (70.73%), Query Frame = 0
BLAST of Clc11G07620 vs. NCBI nr
Match: YP_009751402.1 (NADH-plastoquinone oxidoreductase subunit J [Pedicularis oederi] >QIK00009.1 NADH-plastoquinone oxidoreductase subunit J [Pedicularis oederi]) HSP 1 Score: 101.3 bits (251), Expect = 9.2e-18 Identity = 48/67 (71.64%), Postives = 53/67 (79.10%), Query Frame = 0
BLAST of Clc11G07620 vs. NCBI nr
Match: QAU08122.1 (NdhJ, partial [Abelia forrestii] >QFQ36502.1 NADH-plastoquinone oxidoreductase subunit J [Abelia forrestii]) HSP 1 Score: 100.9 bits (250), Expect = 1.2e-17 Identity = 50/82 (60.98%), Postives = 58/82 (70.73%), Query Frame = 0
BLAST of Clc11G07620 vs. ExPASy Swiss-Prot
Match: Q4VZH2 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhJ PE=3 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 4.6e-20 Identity = 48/67 (71.64%), Postives = 52/67 (77.61%), Query Frame = 0
BLAST of Clc11G07620 vs. ExPASy Swiss-Prot
Match: B1A938 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Carica papaya OX=3649 GN=ndhJ PE=3 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 6.0e-20 Identity = 47/67 (70.15%), Postives = 53/67 (79.10%), Query Frame = 0
BLAST of Clc11G07620 vs. ExPASy Swiss-Prot
Match: A0ZZ38 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Gossypium barbadense OX=3634 GN=ndhJ PE=3 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 6.0e-20 Identity = 47/67 (70.15%), Postives = 53/67 (79.10%), Query Frame = 0
BLAST of Clc11G07620 vs. ExPASy Swiss-Prot
Match: Q2L910 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Gossypium hirsutum OX=3635 GN=ndhJ PE=3 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 6.0e-20 Identity = 47/67 (70.15%), Postives = 53/67 (79.10%), Query Frame = 0
BLAST of Clc11G07620 vs. ExPASy Swiss-Prot
Match: B2LMJ6 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Guizotia abyssinica OX=4230 GN=ndhJ PE=3 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 6.0e-20 Identity = 50/80 (62.50%), Postives = 56/80 (70.00%), Query Frame = 0
BLAST of Clc11G07620 vs. ExPASy TrEMBL
Match: A0A2S1UEI3 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Willughbeia edulis OX=1489960 GN=ndhJ PE=3 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 2.6e-18 Identity = 48/67 (71.64%), Postives = 53/67 (79.10%), Query Frame = 0
BLAST of Clc11G07620 vs. ExPASy TrEMBL
Match: A0A4V1EJP6 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Abelia chinensis OX=180068 GN=ndhJ PE=3 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 4.5e-18 Identity = 51/82 (62.20%), Postives = 58/82 (70.73%), Query Frame = 0
BLAST of Clc11G07620 vs. ExPASy TrEMBL
Match: A0A5P8G180 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Abelia uniflora OX=1112097 GN=ndhJ PE=3 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 4.5e-18 Identity = 51/82 (62.20%), Postives = 58/82 (70.73%), Query Frame = 0
BLAST of Clc11G07620 vs. ExPASy TrEMBL
Match: A0A5P8G231 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Abelia macrotera OX=1630337 GN=ndhJ PE=3 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 4.5e-18 Identity = 51/82 (62.20%), Postives = 58/82 (70.73%), Query Frame = 0
BLAST of Clc11G07620 vs. ExPASy TrEMBL
Match: A0A5P8G153 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Abelia grandiflora OX=105883 GN=ndhJ PE=3 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 4.5e-18 Identity = 51/82 (62.20%), Postives = 58/82 (70.73%), Query Frame = 0
BLAST of Clc11G07620 vs. TAIR 10
Match: ATCG00420.1 (NADH dehydrogenase subunit J ) HSP 1 Score: 94.4 bits (233), Expect = 1.0e-19 Identity = 45/67 (67.16%), Postives = 52/67 (77.61%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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