
Clc11G06830 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAAGTTCAGGGATAGGACTGAAGATTTTAAAGATGTTGTGCGGCACTGTGCTATTTCGTTAGGGTACAATGAGGTTTGTTTGCTTTCCTTAAAGTATATACTTGCTTGTTGATGTGAAACTTGAACTATATATTTCTGGTGAAAGATTTTAGCTATTTAGCATGAAATGCATGGATTACACTTGTTCTGTCGTGTTATAATTTTCTGTGTTCTTCAAGATGATTGTTACCAGCAGCAACTATGAGTGTAGTTTCTGTGCTCTGCCACAACAAGAATTTCTTGTTATCAATTACGAATGTTTTAGTGTTTCTCTTGAAACATCCTTATGTTAAGTACAATGCTTTTTCAGTCCAAGTTGGCGGTTATTATGGCATCTTTCATCATTCAGAAACCGCGGCAAAGGTCACCTTTCATCAAAGCTGCCCTGAAAACGGTAGAAATATCAATATTGAAGTGTTTTGGTATTTCTTTTTTCTTTTTCTTGAGAACTTAGTTGTATCTTTAACTTAGTCGTATCTTGAGCTTATTTTATTCAAACATTTGTTTCATGAATTACAACTTCCAAATGTGTTAAAAAAATTTGCTAAAACACTCGTGAAATTGAAAATGTATATGTACATGCAACCAACATGTTTGACTCCATTACTGATCTTGAATCAGCTTGAAAGCATTGGTGCTCTTGAAGAGTTTATGTTGAAACATCAAAAGGACTATGTAGATATGTATCGCACGACAGATCAAGAGAGAGACAATATTGAACACGAGGTGAGCTATCCACTTACCTGGGAGATCACTAAGTGCAATATCAGAATACCACTCTACCAGTCTATATGGAAATAATAAGATTGCTTGATAAAACTTGTATCTAAAAGGAAGAATTTCTCGAAGTGAGAGTGATAGGTTGTTTTAATCATGGCCACACTTCGTCCTCTGGATAAGCTTAGTCATAATTCATTTGGTACGATTTTCATGAAGGTAGAAGTGCTCGACTGTTTTTCCTTCCCATTTTTTCTTCCCACACACACGTTTGTCCTTTATTGGTTAGTATTTTTCTAATAAATTAACTTTCATTCTTGGCACATTGTGATGTCAATTGATTATAACTATACTATACGCAGGTAACTGCCTTCATCAAAGCATGCCAAGAACAACTTGATATCCTAAAAAACAGCATTAACGCGGATGATGCACACTCAAAGGGATGGCGTGGTCGTAGCACTGATGATTCTAATGCTGATACTATTGCACACAAACATGGGGTGGTGAGTGTTGTTTTTTGTTTCTGTTCTTATTTACTAGTTTATTTTGCTTGTGCTGCACACTTCTCCAAACTACTTACCCTTACTCAGGAAGAAGTGAGACACTGGATTTTCTTGCCCTGTCAACAATTAAAATTAATTTGACATTGTTTACCCCATTATGTTCTCTACGCTCTCATTCTTCTACCTGCTTAGGCTCTATGAATTAAATATTTAGTATTGGCATTCTCCATATTTCTTATCAATTCCCAAGTCCTGGCCTCCTTCAAGGCTGTCACTATTGGTTGGATTGTCATCTCTTTATAAAAGTAGTGAGTTTTCATCTTTCCCGAATGTAGATAGTGGGGACATCCTTTTAGTGAAAGATTTTGCTTACGTTAATTTTTTGTACTTGGGAATTGTAAGATTCTTTTTTTTTTTTGAGGGGGGGGGGGGGGGGGGGGCTTCCCACACTCCCACCAAAAGTAGTTCCATTCTTGAATTTGAAGTTTCCTTCGTTTGACTGCAGGTTCTAATTTTGAGTGAGAAACTCCATTCGGTAACATCACAATTTGATAAGCTAAGAGCCATTCGGTTTCAAGATATCATAAGCAAAGCAGTACCAAGAAGAAAACTGAACCAAGTAAATAAACCACGTTCTGCCAATGCCCCTGAGTATAGTAATACAGAGCTGAGGGAACCTGATGATAATTTTGAGCATCAACCTGTCCGAGCCCAACAACTGTTGGATGATGAAACTCGTGCACTTCAGGTAATCAAAATATGGAGGTGAAACAGACTTTGATGAGAGTTCTATCATTTGTTTATTTATTTGATAAAAAGACAATTTTATTGATTGAATGAAATAATCCAAAGTGGTATAAAAGGGCCTATCATGGGATTGCAAAAGATATCTCCAATTTGCAACAAAGGAAATTTAAACTATATCGGTTAAAGGGATGCGTAAAAGATTTCGGAAAAGCTGTTGGATTATTTGTTTGTTGAATCGAGCTTTCTTCTTGATGTGTAAAAGTTGTGAACTTGGCTGTTTTCTTACAAATTTGTAGGTTGAGTTGACTAGTCTTCTTGACACAGTCCAAGAAACAGAAACTAAGATGGTAGAGATGTCTGCTCTAAATCACCTTATGTCTACACACGTTTTGCAGCAAGCACAACAAATTGAACATCTTTATGAACAGGTCAGCAGTTCTAACTCAACTTGTTTTCTCTTCACATTGTCTCTCAACTCTCAATGGTTATTGCAATTCCTTTTTAATTTCTTTCGCAATCAAATTAAATTGAGCACTATTCTCGGTTCTTATAAGTACTAAACTTCCTATTTGCTTTTTTTTCTTAACTTACAAAATAGGCTGTTGAAGCTACGAAGAATGTCGAGCTTGGTAATAAAGAACTTACCCAAGCAATTCAGCGGAATAGCAGTAGCAGAACCTTCCTTCTGCTTTTTCTATTTGTGCTCACCTTTTCAATTCTCTTTCTTGATTGGTACAGTTGATGGGACTGATTGTTGTATCACATTTATGTTATACATTCATATAGAAGCAAGAAAAAGAAGAAATCACCGATGGAATTTAGACCACATTTTTGTTACTGCAAGTATTTTCTTTCATATCCAGACTCAAATAGTTACAATGTAAGTGGATTCCGAGGTAAATATTCTCTTTTTTTGGGGGATCGTATAACTATCTTCCTTGAAGGAACTATTCTACTCGAAGACTGGCTTTTCATTTGCCAGTTTTTGTACTACAGGAGTGAACCATCTGCCACTTCAATTTCTCGAAGTTCCCTGCATTTTAGTTGCTGGAGCATGAGGTTTTCCTGA ATGGCGAAGTTCAGGGATAGGACTGAAGATTTTAAAGATGTTGTGCGGCACTGTGCTATTTCGTTAGGGTACAATGAGTCCAAGTTGGCGGTTATTATGGCATCTTTCATCATTCAGAAACCGCGGCAAAGGTCACCTTTCATCAAAGCTGCCCTGAAAACGCTTGAAAGCATTGGTGCTCTTGAAGAGTTTATGTTGAAACATCAAAAGGACTATGTAGATATGTATCGCACGACAGATCAAGAGAGAGACAATATTGAACACGAGGTAACTGCCTTCATCAAAGCATGCCAAGAACAACTTGATATCCTAAAAAACAGCATTAACGCGGATGATGCACACTCAAAGGGATGGCGTGGTCGTAGCACTGATGATTCTAATGCTGATACTATTGCACACAAACATGGGGTGGTTCTAATTTTGAGTGAGAAACTCCATTCGGTAACATCACAATTTGATAAGCTAAGAGCCATTCGGTTTCAAGATATCATAAGCAAAGCAGTACCAAGAAGAAAACTGAACCAAGTAAATAAACCACGTTCTGCCAATGCCCCTGAGTATAGTAATACAGAGCTGAGGGAACCTGATGATAATTTTGAGCATCAACCTGTCCGAGCCCAACAACTGTTGGATGATGAAACTCGTGCACTTCAGGTTGAGTTGACTAGTCTTCTTGACACAGTCCAAGAAACAGAAACTAAGATGGTAGAGATGTCTGCTCTAAATCACCTTATGTCTACACACGTTTTGCAGCAAGCACAACAAATTGAACATCTTTATGAACAGGCTGTTGAAGCTACGAAGAATGTCGAGCTTGTTGATGGGACTGATTGTTGTATCACATTTATGTTATACATTCATATAGAAGCAAGAAAAAGAAGAAATCACCGATGGAATTTAGACCACATTTTTGTTACTGCAAGTATTTTCTTTCATATCCAGACTCAAATAGTTACAATGAGTGAACCATCTGCCACTTCAATTTCTCGAAGTTCCCTGCATTTTAGTTGCTGGAGCATGAGGTTTTCCTGA ATGGCGAAGTTCAGGGATAGGACTGAAGATTTTAAAGATGTTGTGCGGCACTGTGCTATTTCGTTAGGGTACAATGAGTCCAAGTTGGCGGTTATTATGGCATCTTTCATCATTCAGAAACCGCGGCAAAGGTCACCTTTCATCAAAGCTGCCCTGAAAACGCTTGAAAGCATTGGTGCTCTTGAAGAGTTTATGTTGAAACATCAAAAGGACTATGTAGATATGTATCGCACGACAGATCAAGAGAGAGACAATATTGAACACGAGGTAACTGCCTTCATCAAAGCATGCCAAGAACAACTTGATATCCTAAAAAACAGCATTAACGCGGATGATGCACACTCAAAGGGATGGCGTGGTCGTAGCACTGATGATTCTAATGCTGATACTATTGCACACAAACATGGGGTGGTTCTAATTTTGAGTGAGAAACTCCATTCGGTAACATCACAATTTGATAAGCTAAGAGCCATTCGGTTTCAAGATATCATAAGCAAAGCAGTACCAAGAAGAAAACTGAACCAAGTAAATAAACCACGTTCTGCCAATGCCCCTGAGTATAGTAATACAGAGCTGAGGGAACCTGATGATAATTTTGAGCATCAACCTGTCCGAGCCCAACAACTGTTGGATGATGAAACTCGTGCACTTCAGGTTGAGTTGACTAGTCTTCTTGACACAGTCCAAGAAACAGAAACTAAGATGGTAGAGATGTCTGCTCTAAATCACCTTATGTCTACACACGTTTTGCAGCAAGCACAACAAATTGAACATCTTTATGAACAGGCTGTTGAAGCTACGAAGAATGTCGAGCTTGTTGATGGGACTGATTGTTGTATCACATTTATGTTATACATTCATATAGAAGCAAGAAAAAGAAGAAATCACCGATGGAATTTAGACCACATTTTTGTTACTGCAAGTATTTTCTTTCATATCCAGACTCAAATAGTTACAATGAGTGAACCATCTGCCACTTCAATTTCTCGAAGTTCCCTGCATTTTAGTTGCTGGAGCATGAGGTTTTCCTGA MAKFRDRTEDFKDVVRHCAISLGYNESKLAVIMASFIIQKPRQRSPFIKAALKTLESIGALEEFMLKHQKDYVDMYRTTDQERDNIEHEVTAFIKACQEQLDILKNSINADDAHSKGWRGRSTDDSNADTIAHKHGVVLILSEKLHSVTSQFDKLRAIRFQDIISKAVPRRKLNQVNKPRSANAPEYSNTELREPDDNFEHQPVRAQQLLDDETRALQVELTSLLDTVQETETKMVEMSALNHLMSTHVLQQAQQIEHLYEQAVEATKNVELVDGTDCCITFMLYIHIEARKRRNHRWNLDHIFVTASIFFHIQTQIVTMSEPSATSISRSSLHFSCWSMRFS Homology
BLAST of Clc11G06830 vs. NCBI nr
Match: XP_011656400.1 (syntaxin-81 isoform X2 [Cucumis sativus]) HSP 1 Score: 499.6 bits (1285), Expect = 2.2e-137 Identity = 262/272 (96.32%), Postives = 263/272 (96.69%), Query Frame = 0
BLAST of Clc11G06830 vs. NCBI nr
Match: XP_004138436.2 (syntaxin-81 isoform X1 [Cucumis sativus]) HSP 1 Score: 499.6 bits (1285), Expect = 2.2e-137 Identity = 262/272 (96.32%), Postives = 263/272 (96.69%), Query Frame = 0
BLAST of Clc11G06830 vs. NCBI nr
Match: XP_008441427.1 (PREDICTED: syntaxin-81 [Cucumis melo] >XP_008441428.1 PREDICTED: syntaxin-81 [Cucumis melo] >KAA0041530.1 syntaxin-81 [Cucumis melo var. makuwa] >TYK24404.1 syntaxin-81 [Cucumis melo var. makuwa]) HSP 1 Score: 495.4 bits (1274), Expect = 4.1e-136 Identity = 261/272 (95.96%), Postives = 262/272 (96.32%), Query Frame = 0
BLAST of Clc11G06830 vs. NCBI nr
Match: XP_038885486.1 (syntaxin-81 [Benincasa hispida]) HSP 1 Score: 478.0 bits (1229), Expect = 6.7e-131 Identity = 252/272 (92.65%), Postives = 258/272 (94.85%), Query Frame = 0
BLAST of Clc11G06830 vs. NCBI nr
Match: XP_022993065.1 (syntaxin-81-like [Cucurbita maxima] >XP_022993066.1 syntaxin-81-like [Cucurbita maxima] >XP_022993068.1 syntaxin-81-like [Cucurbita maxima]) HSP 1 Score: 476.5 bits (1225), Expect = 2.0e-130 Identity = 254/273 (93.04%), Postives = 258/273 (94.51%), Query Frame = 0
BLAST of Clc11G06830 vs. ExPASy Swiss-Prot
Match: P59277 (Syntaxin-81 OS=Arabidopsis thaliana OX=3702 GN=SYP81 PE=1 SV=2) HSP 1 Score: 352.1 bits (902), Expect = 7.3e-96 Identity = 189/274 (68.98%), Postives = 230/274 (83.94%), Query Frame = 0
BLAST of Clc11G06830 vs. ExPASy Swiss-Prot
Match: Q4VBI7 (Syntaxin-18 OS=Danio rerio OX=7955 GN=stx18 PE=2 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 3.0e-17 Identity = 70/259 (27.03%), Postives = 124/259 (47.88%), Query Frame = 0
BLAST of Clc11G06830 vs. ExPASy Swiss-Prot
Match: Q5REB4 (Syntaxin-18 OS=Pongo abelii OX=9601 GN=STX18 PE=2 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 7.0e-14 Identity = 65/273 (23.81%), Postives = 123/273 (45.05%), Query Frame = 0
BLAST of Clc11G06830 vs. ExPASy Swiss-Prot
Match: Q9P2W9 (Syntaxin-18 OS=Homo sapiens OX=9606 GN=STX18 PE=1 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.2e-13 Identity = 69/269 (25.65%), Postives = 121/269 (44.98%), Query Frame = 0
BLAST of Clc11G06830 vs. ExPASy Swiss-Prot
Match: Q8VDS8 (Syntaxin-18 OS=Mus musculus OX=10090 GN=Stx18 PE=1 SV=2) HSP 1 Score: 77.4 bits (189), Expect = 3.5e-13 Identity = 68/268 (25.37%), Postives = 118/268 (44.03%), Query Frame = 0
BLAST of Clc11G06830 vs. ExPASy TrEMBL
Match: A0A0A0KDA4 (Syntaxin-18_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G009450 PE=3 SV=1) HSP 1 Score: 499.6 bits (1285), Expect = 1.0e-137 Identity = 262/272 (96.32%), Postives = 263/272 (96.69%), Query Frame = 0
BLAST of Clc11G06830 vs. ExPASy TrEMBL
Match: A0A1S3B2Z0 (syntaxin-81 OS=Cucumis melo OX=3656 GN=LOC103485547 PE=3 SV=1) HSP 1 Score: 495.4 bits (1274), Expect = 2.0e-136 Identity = 261/272 (95.96%), Postives = 262/272 (96.32%), Query Frame = 0
BLAST of Clc11G06830 vs. ExPASy TrEMBL
Match: A0A5A7TE20 (Syntaxin-81 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001930 PE=3 SV=1) HSP 1 Score: 495.4 bits (1274), Expect = 2.0e-136 Identity = 261/272 (95.96%), Postives = 262/272 (96.32%), Query Frame = 0
BLAST of Clc11G06830 vs. ExPASy TrEMBL
Match: A0A6J1K136 (syntaxin-81-like OS=Cucurbita maxima OX=3661 GN=LOC111489194 PE=3 SV=1) HSP 1 Score: 476.5 bits (1225), Expect = 9.5e-131 Identity = 254/273 (93.04%), Postives = 258/273 (94.51%), Query Frame = 0
BLAST of Clc11G06830 vs. ExPASy TrEMBL
Match: A0A6J1FLA6 (syntaxin-81-like OS=Cucurbita moschata OX=3662 GN=LOC111445263 PE=3 SV=1) HSP 1 Score: 474.9 bits (1221), Expect = 2.8e-130 Identity = 254/273 (93.04%), Postives = 257/273 (94.14%), Query Frame = 0
BLAST of Clc11G06830 vs. TAIR 10
Match: AT1G51740.1 (syntaxin of plants 81 ) HSP 1 Score: 352.1 bits (902), Expect = 5.2e-97 Identity = 189/274 (68.98%), Postives = 230/274 (83.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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