Clc11G06800 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc11G06800
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	GATA type zinc finger transcription factor family protein
Location	ClcChr11: 6761912 .. 6766555 (+)
RNA-Seq Expression	Clc11G06800
Synteny	Clc11G06800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGAAAGAAGTATGGAAAATTTAATGAATTTTTTTTTAAAATAATGGTTTTTTAAAAAAGAATTCGAAAAATAGGGTGGGGGAGAAAGAATTTGGAAAAATAGGGTGGGGGAGAAAGAATTTTGAAGAATAGGGTTGTGAAATCGTGGACCCGGTCCACGATTTCCAGGGTACGCTGACACCGGCGACCGAACTCGTGGACGGGGTCCACGATTTCGGTAATCGTGGACCGGGTCCACGAGTTCCTCACTTTAAAATCCGACCGGCAGCCTCTCATTTCCACCTCCTTCCTCTCATTTCCACCTCCACCATCTTCATTTCTCTCTTGTCATTCTTCATTTCTCTCCTCATATCTCTCCTTTCACTCTTCATTTCTTTCCTCCTTTCTCTCCTTTCTCTTATTTCAGTTCTCGTTTGAACCCTGAGTGTCTTGAATATTTTTCTGATATAGATTTGAATAAATGGACGCAATCACACGATAATGGGTATCGCTTTGGGTGGATGACAACCAATGCAGCTGAATGTTTGAATGGGGTATTTAAAGGAGCTAGAATGTTACCGATCACATCGATTGTTAGGTTAACATTTTATCGGACAATCTTATACTTTGAACGTCGTAGACAAGAAATAAGTGAAGCACTTGATCGTGGGGACATGTACACAGAATATGCCATGAGAAAGCTTAAAAGGTGGGAGAAACGAGCAACTGCACATACAGTGACGTCAGTTGACAGGGAAACACAAAGTTTTGAAGTTCGAACTGGCATCAGTATGGTTTCTCCCTACAAAGGCCAAAACATACAAGTAGTGCACAAGGAGGTAAACACGACCAAAACTGGCGTCAAATTCATGCAGAGTATATATCATTTTGGCGTGCACGTCATGGCCGCTGTGCATATACTGATCGAAAACGTATTCGTCGTAGACGACAGAGACAACGTGACGAAGGTGTTCCAGAGCAACCCGATGACCAGGAACCTCCCATATTACAACCAGACATTGCATCCGGTTCTGGCCATCAACAGGAATATTATGGACACCATGAATTTCCATCTGTCGTCACCCAACAGGATATCGACGATGTAATCCACCAGCAACAACAAATTGAAGTGCCTGTGCCTCGTCGTGGACAACGTGCGCGAAGACTAGAGCTGAAACGGTAGCTACTAAAGCGTAAACTGCTCGTTCCTCCTTCCCCGCGATTATAGCATGATAATTGGTGTGATTATGACAGCATAAATCGTGGACCCGGTCCACGAGTGTTGACCAAACTCGTGGACCGGGTCCACGAGTATGGGCGAAATCGTGGACCGGGTCCACGAGTTTGGCCGAAATCGTGGACCCGGTCCACGAGTTTGGTCAACACTCGTGGACCGGGTCCACGACTTACTTGAAATCGTGTACCCGGTACACGATTTCACCACCCCAATTCACAAATTATTTTCCAAACCACCCTACTTTTGTCATTAGTTTCTAAAGCACCCTATTTTTCGAATTTTTTTTAAAAATAACATTATTGTTTAAAATAACCCAAATTTAATACGTACTAAAAATTTCTTGATGCTTACCTTAATTTTTGGTGGGTCAACCCTAAAACTTTAATAATGAAAGAGAGAGAAAAAAAAAAACTTACAAATTAAACCCAATTCATGAAATAACTGAACTTTCTATAAATAAACTCTAAAATGTTACCACATTAGCATTTATATTGCCATTTTATGCTTTTTAATTTCACCTCTCTTCCTTAAAAGGAAAGAAACAGACAAGTTGATTTTAGGAAACATTAAATGAGAAATCAATTTTGGAAAACTGAACTTAATCTTTATAACCTAAATTAATTTTGACCTTTAAAAAAATATAACATCATAAATATAAAACAAAAATTAAGTTATTAATATCTTAACTAACTATGTCTAAAAAAATATCTTAATCAACCAAACTTCATTCAAATCATTTTAATTCCTGAAACTAAATTACATAAACATCTTTTCCCTTTATTTAGGCCATACATATATCATCAAATTTATAAATTAACATACTAGATAAGTCTGTTTCCGAGCTGGAAAAAGAACAAATAATAATAATAAATAAATAAATAATAAAGGAAAATGAAGAAGTGAAGAACATATACATATATATGGAATTGTATGATGTGGATACGGATATGGGCGGGGTCCAGCTTGAAAGGGTCAACGGTTGATTTTTTAGGGGTTACAGCCAACAAGGAACAGCCATGGCAATGGCGTCTGAAGGAGGCGCGTCGTCGTAACAGCTAACTCAGTCGTTGAAGGACCCAAATTAATGGTGGGACACAATTCTTGCCAACCTGATCTTTTATCTTTTTTTGTTCTTCCTTTTCTTTTCCTTTTTAATTATTTCTAATGCGTTGTAATCAGATACATTAATCAATAAAAATCCTTTCTTTAATTTTTCTCTTTATTACTATCCCAAATTCGAACATAAAACTCCCACTACGCTGCGCCAAAAGGGGGTCCAATCCAATCCCTCCTCTTGTTTTTCTCTTCTTCCCTCGATTTTTCTTCCTTTTTCCCCCTCCACCCTTTTACCCATCTCGAATTTCTCTGACGATTTCGCTTTTGGGTTCTTTGTTTTGACACTTTTGGTTTACAGATCCACCGTTTTTCTAACCTCCAATCTCAGGTATGTGATTTTAACTCGATTTTCTTTCACATTTCCCCGCTCCCAACTCCCGGATCACGATTGATTTTTCGTTTTTAAGATCTTTTTTGCCTATTTCTCTTGTTAAACAGTCTTGGTTCTGGGTTTTTTGGCTTGAGGTTCATGTTTATTTGTTGCAATTTTATAATCTAGTCTTGAATGGGTTCGGGAGTTTGTGAAGTTAATCTTTCTGGGTTGAAATATTTTTCGCATTTTCTTCTACACGAAACAGAAATGGATTTGAGGAGCATCTGTGTTCAGTTTGATTGATGTAATGCTTATGATTTTGATTTAACAAAACAGCGAAGGGAAGTTAGGGTTGAGAGTTGGGGATTGCTTGTCATCTTGGTTGGTTGGGTGAAAAAGACTCAGATCTAACTCCAAGGGCTTAGCTATGTCTTTCATTGGCACACAACAAAAGTGCAAGGCCTGTGAGAAGACTGTCTACCCTGTGGAGCAGCTCTCTGCTGATGGAGTTTCCTACCATAAGTCTTGCTTTAAATGCAGCCACTGCAAAGGGACTCTAAAGGTATTGCACTGTGTTTTTTGATCTGGATTCTCATCTCTAATATAGCTGAACGCCTCTGAACCAAAGGGTTAGGATATATTTATTCTTTTATATGTGTTTTGGAAGCTCTGGTACCATGCTAATTGACATGACAATTAAATCTAAAAGCTTAAGTTGATTGGTTATAGCATATATTCTTTTAATTAAATCTAAAAGCTTAAGTTGATTGGTTATAGCATATATTCTTTTACATGTATTCTTAATAACGCTTTCTTTTTGTTATACGGGGAATCTAAGCATCTTGCCAAACTATTTTCTAAAGGATATCCAAATGTGATATCAACTTCTGCCTCCAGTATCCATCTGTTGATGTATCTATCACAAGTAAACACAACCTAGATATCAAAGGTTCTCATGTATAACAAGAGATTGACTCGAGCAATAACAAGAGATTTCCTAGAAGTATTGGAAGGTGGTTTATGTTTTTAAGAATTGGAACTCTATCTTACTGTTTATAACCTTGATATTTTCTTGCCTTCAGCTGAGCAATTATTGTTCAATGGAAGGTGTTCTTTACTGTAAGCCTCATTTCGAGCAGCTCTTCAAAGAGACCGGCAACTTCCAGAAGAACTTCCAATCACGTACGTTCTGATTTCTTTCAGATAACTTTATGTTTCACTTCCCAAAAATTTTGCTTTCACATGTTTTATTGTTTTTGAGTTTTATTTTCTACAGCTGCCAAGTCAGCTGAGAAGTTAACTCCAGAGCTGGTAATTTCCTGTTGTAATCAATTGTAATCTGATATTAGGGAGCTTTTTCTCCAAGGAGATAAAATTATGTTGTGTATTGCAACTAATTCTTTTAACCATTAACTGGTTTCAGACTAGGTCACCTAGCAAAGCTGCTGGCATGTTTTCTGGTACTCAAGACAAATGTGCTACTTGTGGTAAAACTGTCTATCCATTAGAGAAGGTAACCCACCTACTGAACTCTTGACAAATAATTCATTATCCCCCTCCTCCTTCAACAAAAGAAAGAGTGAACATTGTTGGAAGCATCCAATCTATGATGCATTAATGCATGAATGAACATCTGTTAGAGTAGGCTAATTAGTTTTGGTTCAAGTTTTGCTATAAAGCTGTGAAGATACAAAATTTAGATTAAAATATTCATCACATGTTAGTATATTACAATTGATAGTTTTATAGAGGACTATATGAATTTGTTATTACAAATACTTGCAGGTAACAGTTGAAAGCCAATCCTACCACAAGTCCTGTTTTAAGTGCTCTCATGGAGGGTGTGCTATATCACCATCAAATTATGCAGCATTAGAAGGTATTCTATATTGCAAACACCACTTCTCCCAACTTTTCAAGGAAAAGGGAAGCTACAACCACCTGATCAAGTCTGCATCCATGAAGCGTTCTGCTGCCCCTGTTCCCGAAGCTTAA

mRNA sequence

ATGAATGAAAGAAGGTACGCTGACACCGGCGACCGAACTCGTGGACGGGGTCCACGATTTCGTTCTCGTTTGAACCCTGAGTGTCTTGAATATTTTTCTGATATAGATTTGAATAAATGGACGCAATCACACGATAATGGGTATCGCTTTGGGTGGATGACAACCAATGCAGCTGAATGTTTGAATGGGGTATTTAAAGGAGCTAGAATGTTACCGATCACATCGATTGTTAGGTTAACATTTTATCGGACAATCTTATACTTTGAACGTCGTAGACAAGAAATAAGTGAAGCACTTGATCGTGGGGACATGTACACAGAATATGCCATGAGAAAGCTTAAAAGGTGGGAGAAACGAGCAACTGCACATACAGTGACGTCAGTTGACAGGGAAACACAAAGTTTTGAAGTTCGAACTGGCATCAAGTATATATCATTTTGGCGTGCACGTCATGGCCGCTGTGCATATACTGATCGAAAACGTATTCGTCGTAGACGACAGAGACAACGTGACGAAGGTGTTCCAGAGCAACCCGATGACCAGGAACCTCCCATATTACAACCAGACATTGCATCCGGTTCTGGCCATCAACAGGAATATTATGGACACCATGAATTTCCATCTGTCGTCACCCAACAGGATATCGACGATGTAATCCACCAGCAACAACAAATTGAAGTGCCTGTGCCTCGTCGTGGACAACGTGCGCGAAGACTAGAGCTGAAACGCATAAATCGTGGACCCGGTCCACGAGTGTTGACCAAACTCGTGGACCGGGTCCACGAGTATGGGCGAAATCGTGGACCGGGTCCACGAGTTTGGCCGAAATCGTGGACCCGGAGGCGCGTCGTCGTAACAGCTAACTCAGTCGTTGAAGGACCCAAATTAATGATCCACCGTTTTTCTAACCTCCAATCTCAGCGAAGGGAAGTTAGGGTTGAGAGTTGGGGATTGCTTGTCATCTTGTGCAAGGCCTGTGAGAAGACTGTCTACCCTGTGGAGCAGCTCTCTGCTGATGGAGTTTCCTACCATAAGTCTTGCTTTAAATGCAGCCACTGCAAAGGGACTCTAAAGCTGAGCAATTATTGTTCAATGGAAGGTGTTCTTTACTGTAAGCCTCATTTCGAGCAGCTCTTCAAAGAGACCGGCAACTTCCAGAAGAACTTCCAATCACCTGCCAAGTCAGCTGAGAAGTTAACTCCAGAGCTGACTAGGTCACCTAGCAAAGCTGCTGGCATGTTTTCTGGTACTCAAGACAAATGTGCTACTTGTGGTAAAACTGTCTATCCATTAGAGAAGGTAACAGTTGAAAGCCAATCCTACCACAAGTCCTGTTTTAAGTGCTCTCATGGAGGGTGTGCTATATCACCATCAAATTATGCAGCATTAGAAGGTATTCTATATTGCAAACACCACTTCTCCCAACTTTTCAAGGAAAAGGGAAGCTACAACCACCTGATCAAGTCTGCATCCATGAAGCGTTCTGCTGCCCCTGTTCCCGAAGCTTAA

Coding sequence (CDS)

ATGAATGAAAGAAGGTACGCTGACACCGGCGACCGAACTCGTGGACGGGGTCCACGATTTCGTTCTCGTTTGAACCCTGAGTGTCTTGAATATTTTTCTGATATAGATTTGAATAAATGGACGCAATCACACGATAATGGGTATCGCTTTGGGTGGATGACAACCAATGCAGCTGAATGTTTGAATGGGGTATTTAAAGGAGCTAGAATGTTACCGATCACATCGATTGTTAGGTTAACATTTTATCGGACAATCTTATACTTTGAACGTCGTAGACAAGAAATAAGTGAAGCACTTGATCGTGGGGACATGTACACAGAATATGCCATGAGAAAGCTTAAAAGGTGGGAGAAACGAGCAACTGCACATACAGTGACGTCAGTTGACAGGGAAACACAAAGTTTTGAAGTTCGAACTGGCATCAAGTATATATCATTTTGGCGTGCACGTCATGGCCGCTGTGCATATACTGATCGAAAACGTATTCGTCGTAGACGACAGAGACAACGTGACGAAGGTGTTCCAGAGCAACCCGATGACCAGGAACCTCCCATATTACAACCAGACATTGCATCCGGTTCTGGCCATCAACAGGAATATTATGGACACCATGAATTTCCATCTGTCGTCACCCAACAGGATATCGACGATGTAATCCACCAGCAACAACAAATTGAAGTGCCTGTGCCTCGTCGTGGACAACGTGCGCGAAGACTAGAGCTGAAACGCATAAATCGTGGACCCGGTCCACGAGTGTTGACCAAACTCGTGGACCGGGTCCACGAGTATGGGCGAAATCGTGGACCGGGTCCACGAGTTTGGCCGAAATCGTGGACCCGGAGGCGCGTCGTCGTAACAGCTAACTCAGTCGTTGAAGGACCCAAATTAATGATCCACCGTTTTTCTAACCTCCAATCTCAGCGAAGGGAAGTTAGGGTTGAGAGTTGGGGATTGCTTGTCATCTTGTGCAAGGCCTGTGAGAAGACTGTCTACCCTGTGGAGCAGCTCTCTGCTGATGGAGTTTCCTACCATAAGTCTTGCTTTAAATGCAGCCACTGCAAAGGGACTCTAAAGCTGAGCAATTATTGTTCAATGGAAGGTGTTCTTTACTGTAAGCCTCATTTCGAGCAGCTCTTCAAAGAGACCGGCAACTTCCAGAAGAACTTCCAATCACCTGCCAAGTCAGCTGAGAAGTTAACTCCAGAGCTGACTAGGTCACCTAGCAAAGCTGCTGGCATGTTTTCTGGTACTCAAGACAAATGTGCTACTTGTGGTAAAACTGTCTATCCATTAGAGAAGGTAACAGTTGAAAGCCAATCCTACCACAAGTCCTGTTTTAAGTGCTCTCATGGAGGGTGTGCTATATCACCATCAAATTATGCAGCATTAGAAGGTATTCTATATTGCAAACACCACTTCTCCCAACTTTTCAAGGAAAAGGGAAGCTACAACCACCTGATCAAGTCTGCATCCATGAAGCGTTCTGCTGCCCCTGTTCCCGAAGCTTAA

Protein sequence

MNERRYADTGDRTRGRGPRFRSRLNPECLEYFSDIDLNKWTQSHDNGYRFGWMTTNAAECLNGVFKGARMLPITSIVRLTFYRTILYFERRRQEISEALDRGDMYTEYAMRKLKRWEKRATAHTVTSVDRETQSFEVRTGIKYISFWRARHGRCAYTDRKRIRRRRQRQRDEGVPEQPDDQEPPILQPDIASGSGHQQEYYGHHEFPSVVTQQDIDDVIHQQQQIEVPVPRRGQRARRLELKRINRGPGPRVLTKLVDRVHEYGRNRGPGPRVWPKSWTRRRVVVTANSVVEGPKLMIHRFSNLQSQRREVRVESWGLLVILCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA

Homology

[Close]

BLAST of Clc11G06800 vs. NCBI nr
Match: XP_038884117.1 (LIM domain-containing protein WLIM2b [Benincasa hispida] >XP_038884118.1 LIM domain-containing protein WLIM2b [Benincasa hispida])

HSP 1 Score: 374.4 bits (960), Expect = 1.5e-99
Identity = 177/180 (98.33%), Postives = 178/180 (98.89%), Query Frame = 0


Query: 323 CKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYCSMEGVLYCKPHFEQLFKET 382
           CKACEKTVYPVEQLSADG+SYHKSCFKCSHCKGTLKLSNY SMEGVLYCKPHFEQLFKET
Sbjct: 10  CKACEKTVYPVEQLSADGISYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKET 69

Query: 383 GNFQKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH 442
           GNF KNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH
Sbjct: 70  GNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH 129

Query: 443 KSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA 502
           KSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
Sbjct: 130 KSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA 189

[Close]

BLAST of Clc11G06800 vs. NCBI nr
Match: XP_004138434.1 (LIM domain-containing protein WLIM2b [Cucumis sativus] >XP_008441430.1 PREDICTED: LIM domain-containing protein WLIM2b [Cucumis melo] >XP_008441431.1 PREDICTED: LIM domain-containing protein WLIM2b [Cucumis melo] >XP_011656401.1 LIM domain-containing protein WLIM2b [Cucumis sativus] >KGN45769.1 hypothetical protein Csa_005194 [Cucumis sativus])

HSP 1 Score: 374.0 bits (959), Expect = 2.0e-99
Identity = 177/180 (98.33%), Postives = 178/180 (98.89%), Query Frame = 0


Query: 323 CKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYCSMEGVLYCKPHFEQLFKET 382
           CKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNY SMEGVLYCKPHFEQLFKET
Sbjct: 10  CKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKET 69

Query: 383 GNFQKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH 442
           GNF KNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH
Sbjct: 70  GNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH 129

Query: 443 KSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA 502
           KSCFKCSHGGCA+SPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
Sbjct: 130 KSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA 189

[Close]

BLAST of Clc11G06800 vs. NCBI nr
Match: XP_022939310.1 (LIM domain-containing protein WLIM2b [Cucurbita moschata] >XP_022939311.1 LIM domain-containing protein WLIM2b [Cucurbita moschata] >XP_022939312.1 LIM domain-containing protein WLIM2b [Cucurbita moschata] >XP_022993072.1 LIM domain-containing protein WLIM2b [Cucurbita maxima] >XP_022993073.1 LIM domain-containing protein WLIM2b [Cucurbita maxima] >KAG7015999.1 LIM domain-containing protein WLIM2b [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 365.5 bits (937), Expect = 7.1e-97
Identity = 173/180 (96.11%), Postives = 175/180 (97.22%), Query Frame = 0


Query: 323 CKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYCSMEGVLYCKPHFEQLFKET 382
           CKACEKTVYPVEQLS DGVSYHKSCFKCSHCKGTLKLSNY SMEGVLYCKPHFEQLFKE+
Sbjct: 10  CKACEKTVYPVEQLSVDGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKES 69

Query: 383 GNFQKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH 442
           GNF KNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH
Sbjct: 70  GNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH 129

Query: 443 KSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA 502
           KSCFKCSHGGC+ISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKR AA VPEA
Sbjct: 130 KSCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRPAASVPEA 189

[Close]

BLAST of Clc11G06800 vs. NCBI nr
Match: KAG6578438.1 (LIM domain-containing protein WLIM2b, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 364.4 bits (934), Expect = 1.6e-96
Identity = 172/180 (95.56%), Postives = 175/180 (97.22%), Query Frame = 0


Query: 323 CKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYCSMEGVLYCKPHFEQLFKET 382
           CK+CEKTVYPVEQLS DGVSYHKSCFKCSHCKGTLKLSNY SMEGVLYCKPHFEQLFKE+
Sbjct: 10  CKSCEKTVYPVEQLSVDGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKES 69

Query: 383 GNFQKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH 442
           GNF KNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH
Sbjct: 70  GNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH 129

Query: 443 KSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA 502
           KSCFKCSHGGC+ISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKR AA VPEA
Sbjct: 130 KSCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRPAASVPEA 189

[Close]

BLAST of Clc11G06800 vs. NCBI nr
Match: XP_023550254.1 (LIM domain-containing protein WLIM2b [Cucurbita pepo subsp. pepo])

HSP 1 Score: 364.4 bits (934), Expect = 1.6e-96
Identity = 172/180 (95.56%), Postives = 175/180 (97.22%), Query Frame = 0


Query: 323 CKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYCSMEGVLYCKPHFEQLFKET 382
           CKACEKTVYPVEQLS DGVSYHKSCFKC+HCKGTLKLSNY SMEGVLYCKPHFEQLFKE+
Sbjct: 10  CKACEKTVYPVEQLSVDGVSYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKPHFEQLFKES 69

Query: 383 GNFQKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH 442
           GNF KNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH
Sbjct: 70  GNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH 129

Query: 443 KSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA 502
           KSCFKCSHGGC+ISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKR AA VPEA
Sbjct: 130 KSCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRPAASVPEA 189

[Close]

BLAST of Clc11G06800 vs. ExPASy Swiss-Prot
Match: Q9M047 (LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B PE=1 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 1.8e-87
Identity = 150/175 (85.71%), Postives = 163/175 (93.14%), Query Frame = 0


Query: 323 CKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYCSMEGVLYCKPHFEQLFKET 382
           CKACEKTVY VE LSADGV YHKSCFKC+HCK  L+LS+Y SMEGVLYCKPHFEQLFKE+
Sbjct: 10  CKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPHFEQLFKES 69

Query: 383 GNFQKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH 442
           G+F KNFQSPAKSA+K TPELTR+PS+ AG FSGTQ+KCATC KTVYP+EKVTVESQ+YH
Sbjct: 70  GSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYH 129

Query: 443 KSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA 498
           KSCFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+KRSAA
Sbjct: 130 KSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKRSAA 184

[Close]

BLAST of Clc11G06800 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 6.5e-85
Identity = 147/181 (81.22%), Postives = 162/181 (89.50%), Query Frame = 0


Query: 323 CKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYCSMEGVLYCKPHFEQLFKET 382
           C+ACEKTVYPVE LSADG+SYHK+CFKCSHCK  L+LSNY SMEGV+YC+PHFEQLFKE+
Sbjct: 10  CRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRPHFEQLFKES 69

Query: 383 GNFQKNFQSPAKS-AEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSY 442
           G+F KNFQSPAK   +K TPEL R+PS+ AGMFSGTQDKCATC KTVYP+EKVTVESQ Y
Sbjct: 70  GSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIEKVTVESQCY 129

Query: 443 HKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPE 502
           HKSCFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+KR+ A    
Sbjct: 130 HKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKRATAAATA 189

[Close]

BLAST of Clc11G06800 vs. ExPASy Swiss-Prot
Match: O80839 (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.3e-66
Identity = 114/175 (65.14%), Postives = 144/175 (82.29%), Query Frame = 0


Query: 323 CKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYCSMEGVLYCKPHFEQLFKET 382
           CKAC+KTVY ++ L+ +G +YHKSCF+C+HCKGTL +SNY SM+GVLYCKPHFEQLFKE+
Sbjct: 10  CKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKPHFEQLFKES 69

Query: 383 GNFQKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH 442
           GN+ KNFQ  A   EK    LTR+PSK +  FSGTQDKCATC KTVYPLEKVT+E +SYH
Sbjct: 70  GNYSKNFQ--AGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVTMEGESYH 129

Query: 443 KSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA 498
           K+CF+C+H GC ++ S+YA+L G+LYCK HF+QLF EKGSYNH+ ++A+  R +A
Sbjct: 130 KTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHRRSA 182

[Close]

BLAST of Clc11G06800 vs. ExPASy Swiss-Prot
Match: Q1ECF5 (LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 4.4e-65
Identity = 107/175 (61.14%), Postives = 146/175 (83.43%), Query Frame = 0


Query: 323 CKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYCSMEGVLYCKPHFEQLFKET 382
           C  C+KTVY V+ LS +G+ YHKSCF+C+HCKGTL++SNY SM+GVLYCK HFEQLFKE+
Sbjct: 10  CNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKTHFEQLFKES 69

Query: 383 GNFQKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH 442
           GNF KNFQ P K+ +   PELTR+PSK + +F GTQDKCA C KTVYPLEK+ +E + +H
Sbjct: 70  GNFSKNFQ-PGKTEK---PELTRTPSKISSIFCGTQDKCAACEKTVYPLEKIQMEGECFH 129

Query: 443 KSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA 498
           K+CF+C+HGGC ++ S+YA+L+ +LYC+HHF+QLF EKG+Y H++++A+ +R+A+
Sbjct: 130 KTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRRTAS 180

[Close]

BLAST of Clc11G06800 vs. ExPASy Swiss-Prot
Match: Q7F9R9 (LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 4.9e-64
Identity = 116/180 (64.44%), Postives = 138/180 (76.67%), Query Frame = 0


Query: 323 CKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYCSMEGVLYCKPHFEQLFKET 382
           C AC+KTV+ ++ L+ADGV YHK+CFKCSHCKG L + +Y SM+GVLYCK HFEQLFKET
Sbjct: 10  CTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHFEQLFKET 69

Query: 383 GNFQKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH 442
           G+F K F    +S +K   EL R+PSK    FSGTQDKCA C KTVYPLEK+T+E +SYH
Sbjct: 70  GSFSKKFAPGCRSTDK---ELARAPSKICSAFSGTQDKCAACQKTVYPLEKLTLEGESYH 129

Query: 443 KSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHL-IKSASMKRSAAPVPE 502
           KSCFKCSHGGC ++ S+YAAL G+LYCK HF QLF EKGSYNH+  KS S +     VPE
Sbjct: 130 KSCFKCSHGGCILTTSSYAALNGVLYCKIHFGQLFMEKGSYNHMKKKSESQEVLPEVVPE 186

[Close]

BLAST of Clc11G06800 vs. ExPASy TrEMBL
Match: A0A1S3B3E4 (LIM domain-containing protein WLIM2b OS=Cucumis melo OX=3656 GN=LOC103485550 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 9.7e-100
Identity = 177/180 (98.33%), Postives = 178/180 (98.89%), Query Frame = 0


Query: 323 CKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYCSMEGVLYCKPHFEQLFKET 382
           CKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNY SMEGVLYCKPHFEQLFKET
Sbjct: 10  CKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKET 69

Query: 383 GNFQKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH 442
           GNF KNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH
Sbjct: 70  GNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH 129

Query: 443 KSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA 502
           KSCFKCSHGGCA+SPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
Sbjct: 130 KSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA 189

[Close]

BLAST of Clc11G06800 vs. ExPASy TrEMBL
Match: A0A0A0KAA4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G009480 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 9.7e-100
Identity = 177/180 (98.33%), Postives = 178/180 (98.89%), Query Frame = 0


Query: 323 CKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYCSMEGVLYCKPHFEQLFKET 382
           CKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNY SMEGVLYCKPHFEQLFKET
Sbjct: 10  CKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKET 69

Query: 383 GNFQKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH 442
           GNF KNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH
Sbjct: 70  GNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH 129

Query: 443 KSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA 502
           KSCFKCSHGGCA+SPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA
Sbjct: 130 KSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA 189

[Close]

BLAST of Clc11G06800 vs. ExPASy TrEMBL
Match: A0A6J1K140 (LIM domain-containing protein WLIM2b OS=Cucurbita maxima OX=3661 GN=LOC111489197 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 3.5e-97
Identity = 173/180 (96.11%), Postives = 175/180 (97.22%), Query Frame = 0


Query: 323 CKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYCSMEGVLYCKPHFEQLFKET 382
           CKACEKTVYPVEQLS DGVSYHKSCFKCSHCKGTLKLSNY SMEGVLYCKPHFEQLFKE+
Sbjct: 10  CKACEKTVYPVEQLSVDGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKES 69

Query: 383 GNFQKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH 442
           GNF KNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH
Sbjct: 70  GNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH 129

Query: 443 KSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA 502
           KSCFKCSHGGC+ISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKR AA VPEA
Sbjct: 130 KSCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRPAASVPEA 189

[Close]

BLAST of Clc11G06800 vs. ExPASy TrEMBL
Match: A0A6J1FFI9 (LIM domain-containing protein WLIM2b OS=Cucurbita moschata OX=3662 GN=LOC111445264 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 3.5e-97
Identity = 173/180 (96.11%), Postives = 175/180 (97.22%), Query Frame = 0


Query: 323 CKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYCSMEGVLYCKPHFEQLFKET 382
           CKACEKTVYPVEQLS DGVSYHKSCFKCSHCKGTLKLSNY SMEGVLYCKPHFEQLFKE+
Sbjct: 10  CKACEKTVYPVEQLSVDGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHFEQLFKES 69

Query: 383 GNFQKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH 442
           GNF KNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH
Sbjct: 70  GNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH 129

Query: 443 KSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA 502
           KSCFKCSHGGC+ISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKR AA VPEA
Sbjct: 130 KSCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRPAASVPEA 189

[Close]

BLAST of Clc11G06800 vs. ExPASy TrEMBL
Match: A0A6J1JU67 (LIM domain-containing protein WLIM2b-like OS=Cucurbita maxima OX=3661 GN=LOC111487536 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 2.9e-96
Identity = 172/180 (95.56%), Postives = 175/180 (97.22%), Query Frame = 0


Query: 323 CKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYCSMEGVLYCKPHFEQLFKET 382
           CKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYCSMEGVLYCKPHFEQLFKET
Sbjct: 10  CKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYCSMEGVLYCKPHFEQLFKET 69

Query: 383 GNFQKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH 442
           GNF KNFQSPAKSAEK TPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVE+Q YH
Sbjct: 70  GNFNKNFQSPAKSAEK-TPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVENQCYH 129

Query: 443 KSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA 502
           KSCFKCSHGGCA+SPSNYAALEGILYCKHHFSQLFKEKGSYNHLIK ASMKR+AA VPEA
Sbjct: 130 KSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKCASMKRNAASVPEA 188

[Close]

BLAST of Clc11G06800 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 324.7 bits (831), Expect = 1.3e-88
Identity = 150/175 (85.71%), Postives = 163/175 (93.14%), Query Frame = 0


Query: 323 CKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYCSMEGVLYCKPHFEQLFKET 382
           CKACEKTVY VE LSADGV YHKSCFKC+HCK  L+LS+Y SMEGVLYCKPHFEQLFKE+
Sbjct: 10  CKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPHFEQLFKES 69

Query: 383 GNFQKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH 442
           G+F KNFQSPAKSA+K TPELTR+PS+ AG FSGTQ+KCATC KTVYP+EKVTVESQ+YH
Sbjct: 70  GSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYH 129

Query: 443 KSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA 498
           KSCFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+KRSAA
Sbjct: 130 KSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKRSAA 184

[Close]

BLAST of Clc11G06800 vs. TAIR 10
Match: AT3G55770.2 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 324.7 bits (831), Expect = 1.3e-88
Identity = 150/175 (85.71%), Postives = 163/175 (93.14%), Query Frame = 0


Query: 323 CKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYCSMEGVLYCKPHFEQLFKET 382
           CKACEKTVY VE LSADGV YHKSCFKC+HCK  L+LS+Y SMEGVLYCKPHFEQLFKE+
Sbjct: 10  CKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPHFEQLFKES 69

Query: 383 GNFQKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH 442
           G+F KNFQSPAKSA+K TPELTR+PS+ AG FSGTQ+KCATC KTVYP+EKVTVESQ+YH
Sbjct: 70  GSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYH 129

Query: 443 KSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA 498
           KSCFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+KRSAA
Sbjct: 130 KSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKRSAA 184

[Close]

BLAST of Clc11G06800 vs. TAIR 10
Match: AT3G55770.3 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 324.7 bits (831), Expect = 1.3e-88
Identity = 150/175 (85.71%), Postives = 163/175 (93.14%), Query Frame = 0


Query: 323 CKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYCSMEGVLYCKPHFEQLFKET 382
           CKACEKTVY VE LSADGV YHKSCFKC+HCK  L+LS+Y SMEGVLYCKPHFEQLFKE+
Sbjct: 10  CKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPHFEQLFKES 69

Query: 383 GNFQKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH 442
           G+F KNFQSPAKSA+K TPELTR+PS+ AG FSGTQ+KCATC KTVYP+EKVTVESQ+YH
Sbjct: 70  GSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYH 129

Query: 443 KSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA 498
           KSCFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+KRSAA
Sbjct: 130 KSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKRSAA 184

[Close]

BLAST of Clc11G06800 vs. TAIR 10
Match: AT3G55770.4 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 324.7 bits (831), Expect = 1.3e-88
Identity = 150/175 (85.71%), Postives = 163/175 (93.14%), Query Frame = 0


Query: 323 CKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYCSMEGVLYCKPHFEQLFKET 382
           CKACEKTVY VE LSADGV YHKSCFKC+HCK  L+LS+Y SMEGVLYCKPHFEQLFKE+
Sbjct: 10  CKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPHFEQLFKES 69

Query: 383 GNFQKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH 442
           G+F KNFQSPAKSA+K TPELTR+PS+ AG FSGTQ+KCATC KTVYP+EKVTVESQ+YH
Sbjct: 70  GSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYH 129

Query: 443 KSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA 498
           KSCFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+KRSAA
Sbjct: 130 KSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKRSAA 184

[Close]

BLAST of Clc11G06800 vs. TAIR 10
Match: AT3G55770.5 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 324.7 bits (831), Expect = 1.3e-88
Identity = 150/175 (85.71%), Postives = 163/175 (93.14%), Query Frame = 0


Query: 323 CKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYCSMEGVLYCKPHFEQLFKET 382
           CKACEKTVY VE LSADGV YHKSCFKC+HCK  L+LS+Y SMEGVLYCKPHFEQLFKE+
Sbjct: 10  CKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPHFEQLFKES 69

Query: 383 GNFQKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYH 442
           G+F KNFQSPAKSA+K TPELTR+PS+ AG FSGTQ+KCATC KTVYP+EKVTVESQ+YH
Sbjct: 70  GSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYH 129

Query: 443 KSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAA 498
           KSCFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+KRSAA
Sbjct: 130 KSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKRSAA 184

The following BLAST results are available for this feature:

BLAST of Clc11G06800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884117.1	1.5e-99	98.33	LIM domain-containing protein WLIM2b [Benincasa hispida] >XP_038884118.1 LIM dom...	[more]
XP_004138434.1	2.0e-99	98.33	LIM domain-containing protein WLIM2b [Cucumis sativus] >XP_008441430.1 PREDICTED...	[more]
XP_022939310.1	7.1e-97	96.11	LIM domain-containing protein WLIM2b [Cucurbita moschata] >XP_022939311.1 LIM do...	[more]
KAG6578438.1	1.6e-96	95.56	LIM domain-containing protein WLIM2b, partial [Cucurbita argyrosperma subsp. sor...	[more]
XP_023550254.1	1.6e-96	95.56	LIM domain-containing protein WLIM2b [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc11G06800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M047	1.8e-87	85.71	LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B P...	[more]
O04193	6.5e-85	81.22	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]
O80839	2.3e-66	65.14	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P...	[more]
Q1ECF5	4.4e-65	61.14	LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B P...	[more]
Q7F9R9	4.9e-64	64.44	LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]

BLAST of Clc11G06800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B3E4	9.7e-100	98.33	LIM domain-containing protein WLIM2b OS=Cucumis melo OX=3656 GN=LOC103485550 PE=...	[more]
A0A0A0KAA4	9.7e-100	98.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G009480 PE=4 SV=1	[more]
A0A6J1K140	3.5e-97	96.11	LIM domain-containing protein WLIM2b OS=Cucurbita maxima OX=3661 GN=LOC111489197...	[more]
A0A6J1FFI9	3.5e-97	96.11	LIM domain-containing protein WLIM2b OS=Cucurbita moschata OX=3662 GN=LOC1114452...	[more]
A0A6J1JU67	2.9e-96	95.56	LIM domain-containing protein WLIM2b-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of Clc11G06800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55770.1	1.3e-88	85.71	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.2	1.3e-88	85.71	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.3	1.3e-88	85.71	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.4	1.3e-88	85.71	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.5	1.3e-88	85.71	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 322..374 e-value: 1.7E-12 score: 57.5 coord: 420..472 e-value: 9.8E-13 score: 58.3
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 421..476 e-value: 3.6E-10 score: 39.9 coord: 323..378 e-value: 8.2E-11 score: 42.0
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 323..357
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 419..479 score: 12.5137
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 321..381 score: 13.2265
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 415..485 e-value: 3.4E-19 score: 70.8 coord: 321..387 e-value: 5.3E-19 score: 70.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..199
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 323..502
None	No IPR available	PANTHER	PTHR24206:SF94	LIM DOMAIN-CONTAINING PROTEIN WLIM2B	coord: 323..502
None	No IPR available	CDD	cd09441	LIM2_SF3	coord: 421..481 e-value: 8.07957E-41 score: 138.757
None	No IPR available	CDD	cd09440	LIM1_SF3	coord: 323..381 e-value: 2.46297E-41 score: 140.293
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 447..486
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 322..348
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 349..389
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 413..446

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc11G06800.1	Clc11G06800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0046872	metal ion binding