Clc11G06750 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc11G06750
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	WUSCHEL-related homeobox 5
Location	ClcChr11: 6657309 .. 6658297 (+)
RNA-Seq Expression	Clc11G06750
Synteny	Clc11G06750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTTCTGACTTGCATAAGGTTTTGTTTCTGAGAAGAGAAGTTTCAGTTTCAGGGGGGAAAGATTTATCATTGGTGTTGAAGAAGAAGAATAATTAATAATATGGAGGATGGGGTTTGTTCTAGAATATACGTAAAAGGGGGAGGAGGATGCGGCGGAGAGAGCGGCAGCGGCGGAGGCGGAAAAGGGAGTGGAAGTAGCAAATGTGGGAGATGGAATCCCACAGCAGAACAAGTAAAAGTGCTGACAGAGCTGTTCAGGTCAGGGCTTAGAACTCCGAGTAGTGATCAGATTCAGAAAATCTCTCATCATCTCAGCTTTTACGGCAAGATCGAGAGCAAGAATGTGTTTTACTGGTTTCAGAATCATAAAGCTCGCGAACGACAAAAGCGTCGCAAACTTTCTCTTCCTCAACAACATCAACAACAACAACATTTCATTCTTCCAACTTCTTCTAACCACCAACGTATGTTTCTCTTTTATATCTCCATCTCCATTTCAAATCACTATCTTCGCTTATAAACACTTGAAAACTCGGCTCCTAAAATCACTTTCTAAATGCTTAAAAATATGAATCAAAGGAGATGTCTTCAAAGTCATTCCAAACTGATTAGCTAGTAAAATCAATTTCTAAGTGCTTAAAAGCATGAATCTAGGAGATATATTCTCTTATAGATACTTGAAAAGTCATTCTAAACTGACTGGCTCGGGGTGTTTTAATTGTTTCATGTTTTGGGGTTTGAGCAGATTTTGCAGATCAGTCAATGACAAATAAGGGAATAATGGAGTTGGAGCCAGAAAGAATGATGAGAACTCTTCAACTTTTTCCATTAAACTCTACCATTGATGAAACACAAGGATTCCCAGATGATGATCACCATCAGTTTAGAGTAAATGGGATGCAGTACGAGGACGCCACAGCTTTCACCTACAAAATAGAGACAAAAATGGATCATCCACCATTGGATCTTCGCTTAAGCTTTCTGTAG

mRNA sequence

CTTTTTCTGACTTGCATAAGGTTTTGTTTCTGAGAAGAGAAGTTTCAGTTTCAGGGGGGAAAGATTTATCATTGGTGTTGAAGAAGAAGAATAATTAATAATATGGAGGATGGGGTTTGTTCTAGAATATACGTAAAAGGGGGAGGAGGATGCGGCGGAGAGAGCGGCAGCGGCGGAGGCGGAAAAGGGAGTGGAAGTAGCAAATGTGGGAGATGGAATCCCACAGCAGAACAAGTAAAAGTGCTGACAGAGCTGTTCAGGTCAGGGCTTAGAACTCCGAGTAGTGATCAGATTCAGAAAATCTCTCATCATCTCAGCTTTTACGGCAAGATCGAGAGCAAGAATGTGTTTTACTGGTTTCAGAATCATAAAGCTCGCGAACGACAAAAGCGTCGCAAACTTTCTCTTCCTCAACAACATCAACAACAACAACATTTCATTCTTCCAACTTCTTCTAACCACCAACATTTTGCAGATCAGTCAATGACAAATAAGGGAATAATGGAGTTGGAGCCAGAAAGAATGATGAGAACTCTTCAACTTTTTCCATTAAACTCTACCATTGATGAAACACAAGGATTCCCAGATGATGATCACCATCAGTTTAGAGTAAATGGGATGCAGTACGAGGACGCCACAGCTTTCACCTACAAAATAGAGACAAAAATGGATCATCCACCATTGGATCTTCGCTTAAGCTTTCTGTAG

Coding sequence (CDS)

ATGGAGGATGGGGTTTGTTCTAGAATATACGTAAAAGGGGGAGGAGGATGCGGCGGAGAGAGCGGCAGCGGCGGAGGCGGAAAAGGGAGTGGAAGTAGCAAATGTGGGAGATGGAATCCCACAGCAGAACAAGTAAAAGTGCTGACAGAGCTGTTCAGGTCAGGGCTTAGAACTCCGAGTAGTGATCAGATTCAGAAAATCTCTCATCATCTCAGCTTTTACGGCAAGATCGAGAGCAAGAATGTGTTTTACTGGTTTCAGAATCATAAAGCTCGCGAACGACAAAAGCGTCGCAAACTTTCTCTTCCTCAACAACATCAACAACAACAACATTTCATTCTTCCAACTTCTTCTAACCACCAACATTTTGCAGATCAGTCAATGACAAATAAGGGAATAATGGAGTTGGAGCCAGAAAGAATGATGAGAACTCTTCAACTTTTTCCATTAAACTCTACCATTGATGAAACACAAGGATTCCCAGATGATGATCACCATCAGTTTAGAGTAAATGGGATGCAGTACGAGGACGCCACAGCTTTCACCTACAAAATAGAGACAAAAATGGATCATCCACCATTGGATCTTCGCTTAAGCTTTCTGTAG

Protein sequence

MEDGVCSRIYVKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKNVFYWFQNHKARERQKRRKLSLPQQHQQQQHFILPTSSNHQHFADQSMTNKGIMELEPERMMRTLQLFPLNSTIDETQGFPDDDHHQFRVNGMQYEDATAFTYKIETKMDHPPLDLRLSFL

Homology

[Close]

BLAST of Clc11G06750 vs. NCBI nr
Match: KAE8646563.1 (hypothetical protein Csa_005730 [Cucumis sativus])

HSP 1 Score: 355.5 bits (911), Expect = 3.0e-94
Identity = 186/202 (92.08%), Postives = 190/202 (94.06%), Query Frame = 0


Query: 1   MEDGVCSRIYVKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS 60
           MEDGVCSRIYVKGGGGC GESG GGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS
Sbjct: 1   MEDGVCSRIYVKGGGGCSGESG-GGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS 60

Query: 61  SDQIQKISHHLSFYGKIESKNVFYWFQNHKARERQKRRKLSLPQQHQQQQHFILPTSSNH 120
           SDQIQKISHHLSFYGKIESKNVFYWFQNHKARERQKRRKLSLP    QQQHFILP SSN 
Sbjct: 61  SDQIQKISHHLSFYGKIESKNVFYWFQNHKARERQKRRKLSLP----QQQHFILPPSSNL 120

Query: 121 QHFADQSMTNKGIM-ELEPERMMRTLQLFPLNSTIDETQGFPDDDHHQFRVNGMQYEDAT 180
           QHFADQSMTNKGIM +LEPERMM+TLQLFPLNSTIDETQG P +DHHQ+RVNG QYEDAT
Sbjct: 121 QHFADQSMTNKGIMDQLEPERMMKTLQLFPLNSTIDETQGLP-EDHHQYRVNGKQYEDAT 180

Query: 181 AFTYKIETKMDHPPLDLRLSFL 202
           AFTYKIETKMDHPPLDLRLSFL
Sbjct: 181 AFTYKIETKMDHPPLDLRLSFL 196

[Close]

BLAST of Clc11G06750 vs. NCBI nr
Match: XP_008441440.1 (PREDICTED: WUSCHEL-related homeobox 5 [Cucumis melo] >KAA0055065.1 WUSCHEL-related homeobox 5 [Cucumis melo var. makuwa] >TYK24420.1 WUSCHEL-related homeobox 5 [Cucumis melo var. makuwa])

HSP 1 Score: 351.3 bits (900), Expect = 5.6e-93
Identity = 184/202 (91.09%), Postives = 189/202 (93.56%), Query Frame = 0


Query: 1   MEDGVCSRIYVKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS 60
           MEDGVCSRIYVKGGGGC GESG GGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS
Sbjct: 1   MEDGVCSRIYVKGGGGCSGESG-GGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS 60

Query: 61  SDQIQKISHHLSFYGKIESKNVFYWFQNHKARERQKRRKLSLPQQHQQQQHFILPTSSNH 120
           SDQIQKISHHLSFYGKIESKNVFYWFQNHKARERQKRRKLSLP    QQQHFILP SSN 
Sbjct: 61  SDQIQKISHHLSFYGKIESKNVFYWFQNHKARERQKRRKLSLP----QQQHFILPPSSNL 120

Query: 121 QHFADQSMTNKGIM-ELEPERMMRTLQLFPLNSTIDETQGFPDDDHHQFRVNGMQYEDAT 180
           QHFADQS TNKGIM +LEPERMM+TLQLFPLNSTIDETQG P+D+HH +RVNG QYEDAT
Sbjct: 121 QHFADQSTTNKGIMDQLEPERMMKTLQLFPLNSTIDETQGLPEDNHH-YRVNGKQYEDAT 180

Query: 181 AFTYKIETKMDHPPLDLRLSFL 202
           AFTYKIETKMDHPPLDLRLSFL
Sbjct: 181 AFTYKIETKMDHPPLDLRLSFL 196

[Close]

BLAST of Clc11G06750 vs. NCBI nr
Match: KAG6578442.1 (WUSCHEL-related homeobox 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 322.0 bits (824), Expect = 3.6e-84
Identity = 176/214 (82.24%), Postives = 185/214 (86.45%), Query Frame = 0


Query: 1   MEDGVCSRIYVKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS 60
           MEDGVCSRIYVK GGGCGGE G GGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS
Sbjct: 8   MEDGVCSRIYVK-GGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS 67

Query: 61  SDQIQKISHHLSFYGKIESKNVFYWFQNHKARERQKRRKLSLPQQH-QQQQHFI--LPTS 120
           SDQIQKISH LSFYGKIESKNVFYWFQNHKARERQKRRK+SL   H QQQQHF+  L  S
Sbjct: 68  SDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSQQQQHFLHSLHLS 127

Query: 121 SNH----------QHFADQSMTNKGIMELEPERMMRTLQLFPLNSTIDETQGFPDDDHHQ 180
           ++H           HFADQS TNKGIMELEPERMM+TLQLFPLNS IDETQG   DD+HQ
Sbjct: 128 NDHNNNNNNIPPSNHFADQSSTNKGIMELEPERMMKTLQLFPLNS-IDETQG--SDDYHQ 187

Query: 181 FRVNGMQYEDATAFTYKIETKMDHPPLDLRLSFL 202
           FRV+G Q+EDAT+FTYKIETKMDHPPLDLRLSFL
Sbjct: 188 FRVDGKQFEDATSFTYKIETKMDHPPLDLRLSFL 217

[Close]

BLAST of Clc11G06750 vs. NCBI nr
Match: XP_023549507.1 (WUSCHEL-related homeobox 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 319.3 bits (817), Expect = 2.3e-83
Identity = 175/217 (80.65%), Postives = 183/217 (84.33%), Query Frame = 0


Query: 1   MEDGVCSRIYVKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS 60
           MEDGVCSRIYVK GGGCGGE G GGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS
Sbjct: 8   MEDGVCSRIYVK-GGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS 67

Query: 61  SDQIQKISHHLSFYGKIESKNVFYWFQNHKARERQKRRKLSLPQQH-QQQQHFILP--TS 120
           SDQIQKISH LSFYGKIESKNVFYWFQNHKARERQKRRK+SL   H  QQQHF+ P   S
Sbjct: 68  SDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQQQHFLHPLHLS 127

Query: 121 SNH-------------QHFADQSMTNKGIMELEPERMMRTLQLFPLNSTIDETQGFPDDD 180
           ++H              HFADQS TNKGIMELEPERMM+TLQLFPLNS IDETQG   DD
Sbjct: 128 NDHNNNNNNNNIIPPTNHFADQSSTNKGIMELEPERMMKTLQLFPLNS-IDETQG--SDD 187

Query: 181 HHQFRVNGMQYEDATAFTYKIETKMDHPPLDLRLSFL 202
           +HQFRV+G  YEDAT+FTYKIETKMDHPPLDLRLSFL
Sbjct: 188 YHQFRVDGKHYEDATSFTYKIETKMDHPPLDLRLSFL 220

[Close]

BLAST of Clc11G06750 vs. NCBI nr
Match: XP_022939921.1 (WUSCHEL-related homeobox 5-like [Cucurbita moschata])

HSP 1 Score: 318.2 bits (814), Expect = 5.2e-83
Identity = 174/215 (80.93%), Postives = 183/215 (85.12%), Query Frame = 0


Query: 1   MEDGVCSRIYVKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS 60
           MEDGVCSRIYVK GGGC GE G GGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS
Sbjct: 8   MEDGVCSRIYVK-GGGCSGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS 67

Query: 61  SDQIQKISHHLSFYGKIESKNVFYWFQNHKARERQKRRKLSLPQQH-QQQQHFILP--TS 120
           SDQIQKISH LSFYGKIESKNVFYWFQNHKARERQKRRK+SL   H  QQQHF+ P   S
Sbjct: 68  SDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQQQHFLHPLHLS 127

Query: 121 SNH-----------QHFADQSMTNKGIMELEPERMMRTLQLFPLNSTIDETQGFPDDDHH 180
           ++H            HFADQS TNKGIMELEPERMM+TLQLFPLNS IDETQG   DD+H
Sbjct: 128 NDHNNNNNNIIPPSNHFADQSSTNKGIMELEPERMMKTLQLFPLNS-IDETQG--SDDYH 187

Query: 181 QFRVNGMQYEDATAFTYKIETKMDHPPLDLRLSFL 202
           QFRV+G Q+EDAT+FTYKIETKMDHPPLDLRLSFL
Sbjct: 188 QFRVDGKQFEDATSFTYKIETKMDHPPLDLRLSFL 218

[Close]

BLAST of Clc11G06750 vs. ExPASy Swiss-Prot
Match: Q8H1D2 (WUSCHEL-related homeobox 5 OS=Arabidopsis thaliana OX=3702 GN=WOX5 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.6e-34
Identity = 88/186 (47.31%), Postives = 121/186 (65.05%), Query Frame = 0


Query: 25  GGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKNVFY 84
           G   G   +KCGRWNPT EQ+K+LT+LFR+GLRTP++DQIQKIS  LSFYGKIESKNVFY
Sbjct: 12  GNNNGGTGTKCGRWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTELSFYGKIESKNVFY 71

Query: 85  WFQNHKARERQKRRKLSLPQQHQQQQHFILPTSSNHQHFADQSMTNKGIMELEPERMMRT 144
           WFQNHKARERQKRRK+S+   H   Q    P++ +    +++          E E+++ T
Sbjct: 72  WFQNHKARERQKRRKISIDFDHHHHQ----PSTRDVFEISEEDCQ-------EEEKVIET 131

Query: 145 LQLFPL------NSTIDETQGFPDDDHHQFRVNGMQYEDATAFT--YKIETKMDH-PPLD 202
           LQLFP+      NS +D+ +   ++ + ++    ++    T+F+       +M+H PPLD
Sbjct: 132 LQLFPVNSFEDSNSKVDKMRARGNNQYREY----IRETTTTSFSPYSSCGAEMEHPPPLD 182

[Close]

BLAST of Clc11G06750 vs. ExPASy Swiss-Prot
Match: Q9FFK0 (WUSCHEL-related homeobox 7 OS=Arabidopsis thaliana OX=3702 GN=WOX7 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 9.4e-27
Identity = 69/110 (62.73%), Postives = 80/110 (72.73%), Query Frame = 0


Query: 11  VKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHH 70
           +K  G C   +G GG G     +KCGRWNPT EQVK+LT+LF++GLRTPS+DQIQKIS  
Sbjct: 8   IKARGLCNNNNGGGGTG-----AKCGRWNPTVEQVKLLTDLFKAGLRTPSTDQIQKISME 67

Query: 71  LSFYGKIESKNVFYWFQNHKARERQKRRKLSLPQ-QHQQQQHFILPTSSN 120
           LSFYGKIESKNVFYWFQNHKARERQK RK+S  +  H+Q      P   N
Sbjct: 68  LSFYGKIESKNVFYWFQNHKARERQKCRKISTVKFDHRQDTDLSKPRRDN 112

[Close]

BLAST of Clc11G06750 vs. ExPASy Swiss-Prot
Match: Q8W0F1 (WUSCHEL-related homeobox 9 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX9 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.3e-25
Identity = 54/66 (81.82%), Postives = 61/66 (92.42%), Query Frame = 0


Query: 34  KCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKNVFYWFQNHKARE 93
           KCGRWNPTAEQVKVLTELFR+GLRTPS++QIQ+IS HLS +GK+ESKNVFYWFQNHKARE
Sbjct: 11  KCGRWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLSAFGKVESKNVFYWFQNHKARE 70

Query: 94  RQKRRK 100
           R   +K
Sbjct: 71  RHHHKK 76

[Close]

BLAST of Clc11G06750 vs. ExPASy Swiss-Prot
Match: Q9SIB4 (WUSCHEL-related homeobox 3 OS=Arabidopsis thaliana OX=3702 GN=WOX3 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 7.7e-21
Identity = 49/78 (62.82%), Postives = 61/78 (78.21%), Query Frame = 0


Query: 37  RWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKNVFYWFQNHKARERQK 96
           RW PT EQ+ +L E++RSG+RTP++ QIQ+I+ HL+FYG+IE KNVFYWFQNHKAR+RQK
Sbjct: 8   RWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKARDRQK 67

Query: 97  RRKLSLPQQHQQQQHFIL 115
            RK    Q HQQQ    L
Sbjct: 68  LRKKLAKQLHQQQHQLQL 85

[Close]

BLAST of Clc11G06750 vs. ExPASy Swiss-Prot
Match: Q25AM2 (WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. indica OX=39946 GN=WOX4 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.2e-19
Identity = 43/66 (65.15%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 37  RWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKNVFYWFQNHKARERQK 96
           RWNP+AEQ+KVL  L+R G+RTP+S QI++I+  L  YG+IE KNVFYWFQNHKARERQK
Sbjct: 92  RWNPSAEQIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQK 151

Query: 97  RRKLSL 103
           +++ +L
Sbjct: 152 QKRAAL 157

[Close]

BLAST of Clc11G06750 vs. ExPASy TrEMBL
Match: A0A5A7UN53 (WUSCHEL-related homeobox 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G002150 PE=3 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 2.7e-93
Identity = 184/202 (91.09%), Postives = 189/202 (93.56%), Query Frame = 0


Query: 1   MEDGVCSRIYVKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS 60
           MEDGVCSRIYVKGGGGC GESG GGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS
Sbjct: 1   MEDGVCSRIYVKGGGGCSGESG-GGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS 60

Query: 61  SDQIQKISHHLSFYGKIESKNVFYWFQNHKARERQKRRKLSLPQQHQQQQHFILPTSSNH 120
           SDQIQKISHHLSFYGKIESKNVFYWFQNHKARERQKRRKLSLP    QQQHFILP SSN 
Sbjct: 61  SDQIQKISHHLSFYGKIESKNVFYWFQNHKARERQKRRKLSLP----QQQHFILPPSSNL 120

Query: 121 QHFADQSMTNKGIM-ELEPERMMRTLQLFPLNSTIDETQGFPDDDHHQFRVNGMQYEDAT 180
           QHFADQS TNKGIM +LEPERMM+TLQLFPLNSTIDETQG P+D+HH +RVNG QYEDAT
Sbjct: 121 QHFADQSTTNKGIMDQLEPERMMKTLQLFPLNSTIDETQGLPEDNHH-YRVNGKQYEDAT 180

Query: 181 AFTYKIETKMDHPPLDLRLSFL 202
           AFTYKIETKMDHPPLDLRLSFL
Sbjct: 181 AFTYKIETKMDHPPLDLRLSFL 196

[Close]

BLAST of Clc11G06750 vs. ExPASy TrEMBL
Match: A0A1S3B2Z9 (WUSCHEL-related homeobox 5 OS=Cucumis melo OX=3656 GN=LOC103485558 PE=3 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 2.7e-93
Identity = 184/202 (91.09%), Postives = 189/202 (93.56%), Query Frame = 0


Query: 1   MEDGVCSRIYVKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS 60
           MEDGVCSRIYVKGGGGC GESG GGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS
Sbjct: 1   MEDGVCSRIYVKGGGGCSGESG-GGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS 60

Query: 61  SDQIQKISHHLSFYGKIESKNVFYWFQNHKARERQKRRKLSLPQQHQQQQHFILPTSSNH 120
           SDQIQKISHHLSFYGKIESKNVFYWFQNHKARERQKRRKLSLP    QQQHFILP SSN 
Sbjct: 61  SDQIQKISHHLSFYGKIESKNVFYWFQNHKARERQKRRKLSLP----QQQHFILPPSSNL 120

Query: 121 QHFADQSMTNKGIM-ELEPERMMRTLQLFPLNSTIDETQGFPDDDHHQFRVNGMQYEDAT 180
           QHFADQS TNKGIM +LEPERMM+TLQLFPLNSTIDETQG P+D+HH +RVNG QYEDAT
Sbjct: 121 QHFADQSTTNKGIMDQLEPERMMKTLQLFPLNSTIDETQGLPEDNHH-YRVNGKQYEDAT 180

Query: 181 AFTYKIETKMDHPPLDLRLSFL 202
           AFTYKIETKMDHPPLDLRLSFL
Sbjct: 181 AFTYKIETKMDHPPLDLRLSFL 196

[Close]

BLAST of Clc11G06750 vs. ExPASy TrEMBL
Match: A0A6J1FH52 (WUSCHEL-related homeobox 5-like OS=Cucurbita moschata OX=3662 GN=LOC111445643 PE=3 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.5e-83
Identity = 174/215 (80.93%), Postives = 183/215 (85.12%), Query Frame = 0


Query: 1   MEDGVCSRIYVKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS 60
           MEDGVCSRIYVK GGGC GE G GGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS
Sbjct: 8   MEDGVCSRIYVK-GGGCSGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS 67

Query: 61  SDQIQKISHHLSFYGKIESKNVFYWFQNHKARERQKRRKLSLPQQH-QQQQHFILP--TS 120
           SDQIQKISH LSFYGKIESKNVFYWFQNHKARERQKRRK+SL   H  QQQHF+ P   S
Sbjct: 68  SDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQQQHFLHPLHLS 127

Query: 121 SNH-----------QHFADQSMTNKGIMELEPERMMRTLQLFPLNSTIDETQGFPDDDHH 180
           ++H            HFADQS TNKGIMELEPERMM+TLQLFPLNS IDETQG   DD+H
Sbjct: 128 NDHNNNNNNIIPPSNHFADQSSTNKGIMELEPERMMKTLQLFPLNS-IDETQG--SDDYH 187

Query: 181 QFRVNGMQYEDATAFTYKIETKMDHPPLDLRLSFL 202
           QFRV+G Q+EDAT+FTYKIETKMDHPPLDLRLSFL
Sbjct: 188 QFRVDGKQFEDATSFTYKIETKMDHPPLDLRLSFL 218

[Close]

BLAST of Clc11G06750 vs. ExPASy TrEMBL
Match: A0A6J1JWK4 (WUSCHEL-related homeobox 5-like OS=Cucurbita maxima OX=3661 GN=LOC111489507 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.1e-82
Identity = 173/215 (80.47%), Postives = 181/215 (84.19%), Query Frame = 0


Query: 1   MEDGVCSRIYVKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS 60
           MEDGVCSRIYVK GGGCGGE G GGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS
Sbjct: 1   MEDGVCSRIYVK-GGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS 60

Query: 61  SDQIQKISHHLSFYGKIESKNVFYWFQNHKARERQKRRKLSLPQQH-QQQQHFILP--TS 120
           SDQIQKISH LSFYGKIESKNVFYWFQNHKARERQKRRK+SL   H  Q QHF+ P   S
Sbjct: 61  SDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQHQHFLHPLHLS 120

Query: 121 SNH-----------QHFADQSMTNKGIMELEPERMMRTLQLFPLNSTIDETQGFPDDDHH 180
           ++H            HFADQS  NKGIMELEPERMM+TLQLFPLNS IDETQG   DD+H
Sbjct: 121 NDHHHNNNNIIPPTNHFADQSSPNKGIMELEPERMMKTLQLFPLNS-IDETQG--SDDYH 180

Query: 181 QFRVNGMQYEDATAFTYKIETKMDHPPLDLRLSFL 202
           QFRV+G QYE AT+FTYKIETKMDHPPLDLRLSFL
Sbjct: 181 QFRVDGKQYEGATSFTYKIETKMDHPPLDLRLSFL 211

[Close]

BLAST of Clc11G06750 vs. ExPASy TrEMBL
Match: A0A6J1GMY2 (WUSCHEL-related homeobox 5-like OS=Cucurbita moschata OX=3662 GN=LOC111455970 PE=3 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.3e-71
Identity = 160/210 (76.19%), Postives = 171/210 (81.43%), Query Frame = 0


Query: 1   MEDGVCSRIYVKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS 60
           M++G+ SR YVK  G  GG  G G  GKGS SSKCGRWNPTAEQVKVLTELFRSGLRTPS
Sbjct: 7   MDEGISSRFYVKPAG--GGGDGGGVAGKGSMSSKCGRWNPTAEQVKVLTELFRSGLRTPS 66

Query: 61  SDQIQKISHHLSFYGKIESKNVFYWFQNHKARERQKRRKLSLP-------QQHQQQQHFI 120
           SDQIQKISH LSFYGKIESKNVFYWFQNHKARERQKRRK+S+          HQQQQHFI
Sbjct: 67  SDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSISLDHTHHHHHHQQQQHFI 126

Query: 121 LPTSSNHQHFA-DQSMTNK-GIMELEPERMMRTLQLFPLNSTIDETQGFPDDDHHQFRVN 180
           LP  SN  +FA DQS TNK G MELEPERMM+TLQLFPLNS I ET+G   D+ HQFRVN
Sbjct: 127 LPPCSN--YFADDQSTTNKGGTMELEPERMMKTLQLFPLNS-IGETEG---DNDHQFRVN 186

Query: 181 GMQYEDATAFTYKIETKMDHPPLDLRLSFL 202
           G QYE+ATAFTYKI TKM+HPPLDLRLSFL
Sbjct: 187 GKQYEEATAFTYKIGTKMEHPPLDLRLSFL 208

[Close]

BLAST of Clc11G06750 vs. TAIR 10
Match: AT3G11260.1 (WUSCHEL related homeobox 5 )

HSP 1 Score: 147.5 bits (371), Expect = 1.1e-35
Identity = 88/186 (47.31%), Postives = 121/186 (65.05%), Query Frame = 0


Query: 25  GGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKNVFY 84
           G   G   +KCGRWNPT EQ+K+LT+LFR+GLRTP++DQIQKIS  LSFYGKIESKNVFY
Sbjct: 12  GNNNGGTGTKCGRWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTELSFYGKIESKNVFY 71

Query: 85  WFQNHKARERQKRRKLSLPQQHQQQQHFILPTSSNHQHFADQSMTNKGIMELEPERMMRT 144
           WFQNHKARERQKRRK+S+   H   Q    P++ +    +++          E E+++ T
Sbjct: 72  WFQNHKARERQKRRKISIDFDHHHHQ----PSTRDVFEISEEDCQ-------EEEKVIET 131

Query: 145 LQLFPL------NSTIDETQGFPDDDHHQFRVNGMQYEDATAFT--YKIETKMDH-PPLD 202
           LQLFP+      NS +D+ +   ++ + ++    ++    T+F+       +M+H PPLD
Sbjct: 132 LQLFPVNSFEDSNSKVDKMRARGNNQYREY----IRETTTTSFSPYSSCGAEMEHPPPLD 182

[Close]

BLAST of Clc11G06750 vs. TAIR 10
Match: AT5G05770.1 (WUSCHEL related homeobox 7 )

HSP 1 Score: 121.7 bits (304), Expect = 6.7e-28
Identity = 69/110 (62.73%), Postives = 80/110 (72.73%), Query Frame = 0


Query: 11  VKGGGGCGGESGSGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHH 70
           +K  G C   +G GG G     +KCGRWNPT EQVK+LT+LF++GLRTPS+DQIQKIS  
Sbjct: 8   IKARGLCNNNNGGGGTG-----AKCGRWNPTVEQVKLLTDLFKAGLRTPSTDQIQKISME 67

Query: 71  LSFYGKIESKNVFYWFQNHKARERQKRRKLSLPQ-QHQQQQHFILPTSSN 120
           LSFYGKIESKNVFYWFQNHKARERQK RK+S  +  H+Q      P   N
Sbjct: 68  LSFYGKIESKNVFYWFQNHKARERQKCRKISTVKFDHRQDTDLSKPRRDN 112

[Close]

BLAST of Clc11G06750 vs. TAIR 10
Match: AT2G28610.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 102.1 bits (253), Expect = 5.5e-22
Identity = 49/78 (62.82%), Postives = 61/78 (78.21%), Query Frame = 0


Query: 37  RWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKNVFYWFQNHKARERQK 96
           RW PT EQ+ +L E++RSG+RTP++ QIQ+I+ HL+FYG+IE KNVFYWFQNHKAR+RQK
Sbjct: 8   RWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKARDRQK 67

Query: 97  RRKLSLPQQHQQQQHFIL 115
            RK    Q HQQQ    L
Sbjct: 68  LRKKLAKQLHQQQHQLQL 85

[Close]

BLAST of Clc11G06750 vs. TAIR 10
Match: AT3G18010.1 (WUSCHEL related homeobox 1 )

HSP 1 Score: 95.9 bits (237), Expect = 3.9e-20
Identity = 49/82 (59.76%), Postives = 60/82 (73.17%), Query Frame = 0


Query: 37  RWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKNVFYWFQNHKARERQK 96
           RWNPT +Q++VL EL+R G RTPS+D IQ+I+  L  YGKIE KNVFYWFQNHKARERQK
Sbjct: 76  RWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQK 135

Query: 97  RRKLSLPQQHQQQQHFILPTSS 119
           RR+    Q     +  +L T+S
Sbjct: 136 RRR----QMETGHEETVLSTAS 153

[Close]

BLAST of Clc11G06750 vs. TAIR 10
Match: AT2G01500.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 94.0 bits (232), Expect = 1.5e-19
Identity = 43/63 (68.25%), Postives = 52/63 (82.54%), Query Frame = 0


Query: 37  RWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHHLSFYGKIESKNVFYWFQNHKARERQK 96
           RWNPT EQ+  L EL+RSG RTP+++QIQ+I+  L  YG+IE KNVFYWFQNHKARER K
Sbjct: 61  RWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHKARERLK 120

Query: 97  RRK 100
           RR+
Sbjct: 121 RRR 123

The following BLAST results are available for this feature:

BLAST of Clc11G06750 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8646563.1	3.0e-94	92.08	hypothetical protein Csa_005730 [Cucumis sativus]	[more]
XP_008441440.1	5.6e-93	91.09	PREDICTED: WUSCHEL-related homeobox 5 [Cucumis melo] >KAA0055065.1 WUSCHEL-relat...	[more]
KAG6578442.1	3.6e-84	82.24	WUSCHEL-related homeobox 5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023549507.1	2.3e-83	80.65	WUSCHEL-related homeobox 5-like [Cucurbita pepo subsp. pepo]	[more]
XP_022939921.1	5.2e-83	80.93	WUSCHEL-related homeobox 5-like [Cucurbita moschata]	[more]

BLAST of Clc11G06750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H1D2	1.6e-34	47.31	WUSCHEL-related homeobox 5 OS=Arabidopsis thaliana OX=3702 GN=WOX5 PE=2 SV=1	[more]
Q9FFK0	9.4e-27	62.73	WUSCHEL-related homeobox 7 OS=Arabidopsis thaliana OX=3702 GN=WOX7 PE=2 SV=1	[more]
Q8W0F1	2.3e-25	81.82	WUSCHEL-related homeobox 9 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX9 PE=2...	[more]
Q9SIB4	7.7e-21	62.82	WUSCHEL-related homeobox 3 OS=Arabidopsis thaliana OX=3702 GN=WOX3 PE=1 SV=1	[more]
Q25AM2	3.2e-19	65.15	WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. indica OX=39946 GN=WOX4 PE=3 S...	[more]

BLAST of Clc11G06750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UN53	2.7e-93	91.09	WUSCHEL-related homeobox 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3B2Z9	2.7e-93	91.09	WUSCHEL-related homeobox 5 OS=Cucumis melo OX=3656 GN=LOC103485558 PE=3 SV=1	[more]
A0A6J1FH52	2.5e-83	80.93	WUSCHEL-related homeobox 5-like OS=Cucurbita moschata OX=3662 GN=LOC111445643 PE...	[more]
A0A6J1JWK4	2.1e-82	80.47	WUSCHEL-related homeobox 5-like OS=Cucurbita maxima OX=3661 GN=LOC111489507 PE=3...	[more]
A0A6J1GMY2	1.3e-71	76.19	WUSCHEL-related homeobox 5-like OS=Cucurbita moschata OX=3662 GN=LOC111455970 PE...	[more]

BLAST of Clc11G06750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11260.1	1.1e-35	47.31	WUSCHEL related homeobox 5	[more]
AT5G05770.1	6.7e-28	62.73	WUSCHEL related homeobox 7	[more]
AT2G28610.1	5.5e-22	62.82	Homeodomain-like superfamily protein	[more]
AT3G18010.1	3.9e-20	59.76	WUSCHEL related homeobox 1	[more]
AT2G01500.1	1.5e-19	68.25	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 33..100 e-value: 3.4E-4 score: 28.6
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 35..95 e-value: 3.0E-18 score: 65.4
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 31..96 score: 11.158985
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 37..97 e-value: 2.125E-4 score: 36.0673
None	No IPR available	GENE3D	1.10.10.60		coord: 34..101 e-value: 8.4E-10 score: 40.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..38
None	No IPR available	PANTHER	PTHR45940:SF3	WUSCHEL-RELATED HOMEOBOX 7	coord: 20..187
IPR044555	Protein WUSCHEL-like	PANTHER	PTHR45940	WUSCHEL-RELATED HOMEOBOX 1-RELATED	coord: 20..187
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 32..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc11G06750.1	Clc11G06750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0099402	plant organ development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity