Clc11G05960 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc11G05960
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	60S ribosomal protein L10-like
Location	ClcChr11: 5836759 .. 5838999 (+)
RNA-Seq Expression	Clc11G05960
Synteny	Clc11G05960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTTCGGCCCTCCGTCATTTTCTCGTATATATATATAATAAGAATTAGGGTTTCTGGTGCCGACGAGGTCAAGTTCGAGTGGGGAGGGACGAGGTAACGCGCGCTCGCCATGGGGAGAAGTACGTAAATCTTTTCGTTTCTTCATCTAATACATTCTTCAATGTTTCTATCTGACGAATAATCTACTTGCATCTCGCAATTTTTGTTTTTTTTTTTTTTTTTTTTTTCTCACTTTCAATGTTAGATACAAATTGTTCGTCGTTTTTTCTTGACGGAAAATTTAGTTGTTGGAAATGGATGCATTTCCGATTGTTACCATTGGAGTATGTTGTGCTTTAGCCGTTTATTTATGAGCTTTTTCTTTAAAATATTGGTTTTGAGTCACTTGACATCTGTACTTCGTTATAGATTAGCAATATTTAAGATTTTTCCTATGATTTATCAAGTATTAAGTTGTAATCCATTCATTCTATCGTATGGAATTAATTAACTATCGTGTAGTGTTGGCATCTATGCAAGGCAGACTTTAAAGAAGTTAATGTTGCACTTTCCTGGTTTTCACGTTATACGATTCACGGATTGGTCTCTGCATATGAAGAAATACTGTTACTGTTTTGTTTTAATTGCTTTCAGTTGCGAGTTTTTATTATTTAATAGGGTGCATTTGCTCGCTGGAAAATGTTTGGTGTTGATTGTCAGAATATGTAAGTTATGAAAATGGATGTGTGCTTTGCAAGGGTTTTTTCGTCATGTTGTGTTGAGTTGATAATCTTTACGGACATCATTATTTATCCTGATGCTCCTCTATGAATAGCCACAGTCCCGAATAGCCCTTGTCTTCAACTCATTTTGGTTATAACTTGATCTTGATAATTCTATGCTAGCTCTTCTTTACCTACAAGGATATTGCATGTTATTCATTTCCGATGTATTCTTTATTGTAGGACCTGCAAGGTGTTACAGGCAAATTAAAAATAAGCCTTATCCAAAATCCAGATTTTGTCGTGGTGTCCCTGATCCTAAGATCAGGATCTACGATGTTGGAATGAAAAAGAAGGGTGTGGATGAATTTCCTTTTTGTGTTCACCTAGTGAGTTGGGAGAAGGAAAACGTGTCGAGTGAGGCTTTGGAAGCTGCTCGGATTGCTTGCAATAAGTATATGGCTAAGTTCGCTGGGAAGGATGCATTCCACTTGAGGGTCAGGGTTCACCCCTTCCATGTTCTGCGAATTAATAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAGACTGGTATGAGAGGTGCTTTTGGCAAACCTCAAGGAACCTGTGCAAGAGTGGCCATCGGTCAGGTTCTTCTTTCAGTTCGGTGCAAGGATAGTAACAGCCAACATGCACAGGAAGCCCTCCGTCGTGCTAAGTTCAAATTCCCTGGTCGTCAGAAGATCATTGTCAGCAGGAAGTGGTATGTCTCAAGAGATTTTTGCAATTTTTTTCTTCTTGTTCAGCTAAAGAAATGCCCTTCTGGGTCATTTAGTGCCTCTGTTTCTTGTGGAGTAATTAAATCTTAAATGTTACTCATACGAGTTTTATTGATTGAATGACAAATGCTTCAAATTTTCTTTTCAGGGGATTCACTAAATTCAGTCGGGCTGATTACCTTGCTTACAAGGCAGAGAACAAAATTCTTCCAGATGGTGTTAACGCCAAGGTAAGCTATATTACATTCATGCTTGCCTTCCTTTTATTACAAACTGTTCAAACGTCTTGGGTGTTTTCCATTTTGTGAGCACAAGAATGGATCTAAGGTTAGCAATGACTACGAGATATGCTACTTCTCTCTTTCTATTGTATGAATTGAGACTCATTAAAAAAGATCTGAAGAGCATTGATATTCCTGGGGTTGCATGTTATAAAACGGTACTTGGTTCGAATGGTGGGTCGTAGGGTCATCTTTCTTGGAGCATTTCTCGAAATTTGTTGGCATAATTACATACATCCTTTTGTAATTACGGTCTTTCTTCTCTTATATCTTAGTGGAAATCCGTTCAACTCTCCTTGACAGGACTCTATTCTTTTTTAATCATTTCACGAATTGTTTCATGGTTAATTTTTGTATATTTGTTTCGTGTTCTTGGAGTTGCTTTATTTTATTACTGATTGGATCGCAACTGAACTCTTTTCAGCTTCTTGGATGCCATGGACCTTTAGCCAATCGTCAACCTGGAAGAGCATTTCTACCTCAAACTGCCTAA

mRNA sequence

ATGGCGGGTTTCTGGTGCCGACGAGGTCAAGTTCGAGTGGGGAGGGACGAGGTAACGCGCGCTCGCCATGGGGAGAAGTACATACAAATTGTTCGTCGTTTTTTCTTGACGGAAAATTTAGTTGTTGGAAATGGATGCATTTCCGATTGTTACCATTGGAGACCTGCAAGGTGTTACAGGCAAATTAAAAATAAGCCTTATCCAAAATCCAGATTTTGTCGTGGTGTCCCTGATCCTAAGATCAGGATCTACGATGTTGGAATGAAAAAGAAGGGTGTGGATGAATTTCCTTTTTGTGTTCACCTAGTGAGTTGGGAGAAGGAAAACGTGTCGAGTGAGGCTTTGGAAGCTGCTCGGATTGCTTGCAATAAGTATATGGCTAAGTTCGCTGGGAAGGATGCATTCCACTTGAGGGTCAGGGTTCACCCCTTCCATGTTCTGCGAATTAATAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAGACTGGTATGAGAGGTGCTTTTGGCAAACCTCAAGGAACCTGTGCAAGAGTGGCCATCGGTCAGGTTCTTCTTTCAGTTCGGTGCAAGGATAGTAACAGCCAACATGCACAGGAAGCCCTCCGTCGTGCTAAGTTCAAATTCCCTGGTCGTCAGAAGATCATTGTCAGCAGGAAGTGGTATGTCTCAAGAGATTTTTGCAATTTTTTTCTTCTTGTTCAGCTAAAGAAATGCCCTTCTGGGGGATTCACTAAATTCAGTCGGGCTGATTACCTTGCTTACAAGGCAGAGAACAAAATTCTTCCAGATGGTGTTAACGCCAAGCTTCTTGGATGCCATGGACCTTTAGCCAATCGTCAACCTGGAAGAGCATTTCTACCTCAAACTGCCTAA

Coding sequence (CDS)

ATGGCGGGTTTCTGGTGCCGACGAGGTCAAGTTCGAGTGGGGAGGGACGAGGTAACGCGCGCTCGCCATGGGGAGAAGTACATACAAATTGTTCGTCGTTTTTTCTTGACGGAAAATTTAGTTGTTGGAAATGGATGCATTTCCGATTGTTACCATTGGAGACCTGCAAGGTGTTACAGGCAAATTAAAAATAAGCCTTATCCAAAATCCAGATTTTGTCGTGGTGTCCCTGATCCTAAGATCAGGATCTACGATGTTGGAATGAAAAAGAAGGGTGTGGATGAATTTCCTTTTTGTGTTCACCTAGTGAGTTGGGAGAAGGAAAACGTGTCGAGTGAGGCTTTGGAAGCTGCTCGGATTGCTTGCAATAAGTATATGGCTAAGTTCGCTGGGAAGGATGCATTCCACTTGAGGGTCAGGGTTCACCCCTTCCATGTTCTGCGAATTAATAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAGACTGGTATGAGAGGTGCTTTTGGCAAACCTCAAGGAACCTGTGCAAGAGTGGCCATCGGTCAGGTTCTTCTTTCAGTTCGGTGCAAGGATAGTAACAGCCAACATGCACAGGAAGCCCTCCGTCGTGCTAAGTTCAAATTCCCTGGTCGTCAGAAGATCATTGTCAGCAGGAAGTGGTATGTCTCAAGAGATTTTTGCAATTTTTTTCTTCTTGTTCAGCTAAAGAAATGCCCTTCTGGGGGATTCACTAAATTCAGTCGGGCTGATTACCTTGCTTACAAGGCAGAGAACAAAATTCTTCCAGATGGTGTTAACGCCAAGCTTCTTGGATGCCATGGACCTTTAGCCAATCGTCAACCTGGAAGAGCATTTCTACCTCAAACTGCCTAA

Protein sequence

MAGFWCRRGQVRVGRDEVTRARHGEKYIQIVRRFFLTENLVVGNGCISDCYHWRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA

Homology

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BLAST of Clc11G05960 vs. NCBI nr
Match: XP_008459481.1 (PREDICTED: 60S ribosomal protein L10-like [Cucumis melo])

HSP 1 Score: 442.6 bits (1137), Expect = 2.7e-120
Identity = 217/238 (91.18%), Postives = 217/238 (91.18%), Query Frame = 0


Query: 54  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE 113
           RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE
Sbjct: 29  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE 88

Query: 114 ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ 173
           ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ
Sbjct: 89  ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ 148

Query: 174 GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLL 233
           GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW            
Sbjct: 149 GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW------------ 208

Query: 234 VQLKKCPSGGFTKFSRADYLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 292
                    GFTKFSRADYLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
Sbjct: 209 ---------GFTKFSRADYLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 245

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BLAST of Clc11G05960 vs. NCBI nr
Match: XP_038891235.1 (60S ribosomal protein L10-like [Benincasa hispida])

HSP 1 Score: 440.7 bits (1132), Expect = 1.0e-119
Identity = 216/238 (90.76%), Postives = 216/238 (90.76%), Query Frame = 0


Query: 54  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE 113
           RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE
Sbjct: 4   RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE 63

Query: 114 ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ 173
           ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ
Sbjct: 64  ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ 123

Query: 174 GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLL 233
           GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW            
Sbjct: 124 GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW------------ 183

Query: 234 VQLKKCPSGGFTKFSRADYLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 292
                    GFTKFSRADYLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQ A
Sbjct: 184 ---------GFTKFSRADYLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQAA 220

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BLAST of Clc11G05960 vs. NCBI nr
Match: XP_022142890.1 (60S ribosomal protein L10-like [Momordica charantia] >XP_022142891.1 60S ribosomal protein L10-like [Momordica charantia])

HSP 1 Score: 440.3 bits (1131), Expect = 1.3e-119
Identity = 216/238 (90.76%), Postives = 216/238 (90.76%), Query Frame = 0


Query: 54  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE 113
           RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE
Sbjct: 4   RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE 63

Query: 114 ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ 173
           ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ
Sbjct: 64  ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ 123

Query: 174 GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLL 233
           GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW            
Sbjct: 124 GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW------------ 183

Query: 234 VQLKKCPSGGFTKFSRADYLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 292
                    GFTKFSRADYL YKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
Sbjct: 184 ---------GFTKFSRADYLNYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 220

[Close]

BLAST of Clc11G05960 vs. NCBI nr
Match: XP_022148973.1 (60S ribosomal protein L10-like [Momordica charantia])

HSP 1 Score: 439.5 bits (1129), Expect = 2.3e-119
Identity = 214/238 (89.92%), Postives = 217/238 (91.18%), Query Frame = 0


Query: 54  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE 113
           RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE
Sbjct: 4   RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE 63

Query: 114 ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ 173
           ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ
Sbjct: 64  ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ 123

Query: 174 GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLL 233
           GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW            
Sbjct: 124 GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW------------ 183

Query: 234 VQLKKCPSGGFTKFSRADYLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 292
                    GFTKFSRADYL+YK+ENKI+PDGVNAKLLGCHGPLANRQPGRAFLPQTA
Sbjct: 184 ---------GFTKFSRADYLSYKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQTA 220

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BLAST of Clc11G05960 vs. NCBI nr
Match: KAG6578494.1 (60S ribosomal protein L10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 439.1 bits (1128), Expect = 2.9e-119
Identity = 214/238 (89.92%), Postives = 217/238 (91.18%), Query Frame = 0


Query: 54  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE 113
           RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE
Sbjct: 4   RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE 63

Query: 114 ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ 173
           ALEAARIACNKYM+KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ
Sbjct: 64  ALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ 123

Query: 174 GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLL 233
           GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW            
Sbjct: 124 GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW------------ 183

Query: 234 VQLKKCPSGGFTKFSRADYLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 292
                    GFTKFSRADYLAYKA+NKILPDGVNAKLLGCHGPLANRQPGRAFLP+TA
Sbjct: 184 ---------GFTKFSRADYLAYKADNKILPDGVNAKLLGCHGPLANRQPGRAFLPETA 220

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BLAST of Clc11G05960 vs. ExPASy Swiss-Prot
Match: Q9SPB3 (60S ribosomal protein L10 OS=Vitis riparia OX=96939 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 1.1e-113
Identity = 196/234 (83.76%), Postives = 207/234 (88.46%), Query Frame = 0


Query: 54  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE 113
           RPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE
Sbjct: 4   RPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE 63

Query: 114 ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ 173
           ALEAARIACNKYM K+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ
Sbjct: 64  ALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ 123

Query: 174 GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLL 233
           GTCARV+IGQVLLSVRCKD NS HAQEALRRAKFKFP RQKIIVSRKW            
Sbjct: 124 GTCARVSIGQVLLSVRCKDGNSHHAQEALRRAKFKFPARQKIIVSRKW------------ 183

Query: 234 VQLKKCPSGGFTKFSRADYLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFL 288
                    GFTKF+R DY+ +K++N+ILPDGVNAKLLGCHGPLANRQPG+AF+
Sbjct: 184 ---------GFTKFNRTDYIKWKSQNRILPDGVNAKLLGCHGPLANRQPGKAFI 216

[Close]

BLAST of Clc11G05960 vs. ExPASy Swiss-Prot
Match: P93847 (60S ribosomal protein L10 OS=Solanum melongena OX=4111 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 5.6e-113
Identity = 200/234 (85.47%), Postives = 204/234 (87.18%), Query Frame = 0


Query: 54  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE 113
           RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSE
Sbjct: 4   RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSE 63

Query: 114 ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ 173
           ALEAARIACNKYM K AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ
Sbjct: 64  ALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ 123

Query: 174 GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLL 233
           G CARVAIGQVLLSVRCKD NS HAQEALRRAKFKFPGRQKIIVSRKW            
Sbjct: 124 GVCARVAIGQVLLSVRCKDGNSNHAQEALRRAKFKFPGRQKIIVSRKW------------ 183

Query: 234 VQLKKCPSGGFTKFSRADYLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFL 288
                    GFTKFSR DYL YK+EN+I+PDGVNAKLLG HGPLA RQPGRAFL
Sbjct: 184 ---------GFTKFSRTDYLKYKSENRIVPDGVNAKLLGNHGPLAARQPGRAFL 216

[Close]

BLAST of Clc11G05960 vs. ExPASy Swiss-Prot
Match: Q9M5M7 (60S ribosomal protein L10 OS=Euphorbia esula OX=3993 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 2.1e-112
Identity = 199/238 (83.61%), Postives = 206/238 (86.55%), Query Frame = 0


Query: 54  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE 113
           RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE
Sbjct: 4   RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE 63

Query: 114 ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ 173
           ALEAARIACNKYM KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ
Sbjct: 64  ALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ 123

Query: 174 GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLL 233
           G CARVAIGQVLLSVRCKD+NS +AQEALRRAKFKFPGRQKIIVSRKW            
Sbjct: 124 GVCARVAIGQVLLSVRCKDNNSHNAQEALRRAKFKFPGRQKIIVSRKW------------ 183

Query: 234 VQLKKCPSGGFTKFSRADYLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 292
                    GFTK +RADY   K+EN+ILPDGVNAKLLGCHG LANR+PGRAF+   A
Sbjct: 184 ---------GFTKINRADYPRLKSENRILPDGVNAKLLGCHGRLANRKPGRAFIDAVA 220

[Close]

BLAST of Clc11G05960 vs. ExPASy Swiss-Prot
Match: Q93VT9 (60S ribosomal protein L10-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10A PE=1 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 9.2e-108
Identity = 188/235 (80.00%), Postives = 199/235 (84.68%), Query Frame = 0


Query: 54  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE 113
           RPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSE
Sbjct: 4   RPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSE 63

Query: 114 ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ 173
           ALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFGK  
Sbjct: 64  ALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKAL 123

Query: 174 GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLL 233
           GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKW            
Sbjct: 124 GTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKW------------ 183

Query: 234 VQLKKCPSGGFTKFSRADYLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLP 289
                    GFTKF+RAD+   + E +++PDGVNAK L CHGPLANRQPG AFLP
Sbjct: 184 ---------GFTKFNRADFTKLRQEKRVVPDGVNAKFLSCHGPLANRQPGSAFLP 217

[Close]

BLAST of Clc11G05960 vs. ExPASy Swiss-Prot
Match: Q08770 (60S ribosomal protein L10-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10B PE=2 SV=2)

HSP 1 Score: 389.4 bits (999), Expect = 3.5e-107
Identity = 188/234 (80.34%), Postives = 198/234 (84.62%), Query Frame = 0


Query: 54  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE 113
           RPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENVSSE
Sbjct: 4   RPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENVSSE 63

Query: 114 ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ 173
           ALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFGK  
Sbjct: 64  ALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKAL 123

Query: 174 GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLL 233
           GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKW            
Sbjct: 124 GTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKW------------ 183

Query: 234 VQLKKCPSGGFTKFSRADYLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFL 288
                    GFTKF+RADY   + E +I+PDGVNAK L CHGPLANRQPG AFL
Sbjct: 184 ---------GFTKFNRADYTKLRQEKRIVPDGVNAKFLSCHGPLANRQPGSAFL 216

[Close]

BLAST of Clc11G05960 vs. ExPASy TrEMBL
Match: A0A1S3CAD5 (60S ribosomal protein L10-like OS=Cucumis melo OX=3656 GN=LOC103498603 PE=3 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 1.3e-120
Identity = 217/238 (91.18%), Postives = 217/238 (91.18%), Query Frame = 0


Query: 54  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE 113
           RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE
Sbjct: 29  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE 88

Query: 114 ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ 173
           ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ
Sbjct: 89  ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ 148

Query: 174 GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLL 233
           GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW            
Sbjct: 149 GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW------------ 208

Query: 234 VQLKKCPSGGFTKFSRADYLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 292
                    GFTKFSRADYLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
Sbjct: 209 ---------GFTKFSRADYLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 245

[Close]

BLAST of Clc11G05960 vs. ExPASy TrEMBL
Match: A0A6J1CM71 (60S ribosomal protein L10-like OS=Momordica charantia OX=3673 GN=LOC111012895 PE=3 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 6.4e-120
Identity = 216/238 (90.76%), Postives = 216/238 (90.76%), Query Frame = 0


Query: 54  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE 113
           RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE
Sbjct: 4   RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE 63

Query: 114 ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ 173
           ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ
Sbjct: 64  ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ 123

Query: 174 GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLL 233
           GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW            
Sbjct: 124 GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW------------ 183

Query: 234 VQLKKCPSGGFTKFSRADYLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 292
                    GFTKFSRADYL YKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
Sbjct: 184 ---------GFTKFSRADYLNYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 220

[Close]

BLAST of Clc11G05960 vs. ExPASy TrEMBL
Match: A0A6J1D5K0 (60S ribosomal protein L10-like OS=Momordica charantia OX=3673 GN=LOC111017508 PE=3 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 1.1e-119
Identity = 214/238 (89.92%), Postives = 217/238 (91.18%), Query Frame = 0


Query: 54  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE 113
           RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE
Sbjct: 4   RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE 63

Query: 114 ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ 173
           ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ
Sbjct: 64  ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ 123

Query: 174 GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLL 233
           GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW            
Sbjct: 124 GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW------------ 183

Query: 234 VQLKKCPSGGFTKFSRADYLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 292
                    GFTKFSRADYL+YK+ENKI+PDGVNAKLLGCHGPLANRQPGRAFLPQTA
Sbjct: 184 ---------GFTKFSRADYLSYKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQTA 220

[Close]

BLAST of Clc11G05960 vs. ExPASy TrEMBL
Match: A0A5A7TFE6 (60S ribosomal protein L10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00450 PE=3 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 5.4e-119
Identity = 213/238 (89.50%), Postives = 216/238 (90.76%), Query Frame = 0


Query: 54  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE 113
           RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE
Sbjct: 4   RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE 63

Query: 114 ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ 173
           ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ
Sbjct: 64  ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ 123

Query: 174 GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLL 233
           GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW            
Sbjct: 124 GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW------------ 183

Query: 234 VQLKKCPSGGFTKFSRADYLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 292
                    GFTKFSRADYL +K+ENKI+PDGVNAKLLGCHGPLANRQPGRAFLPQTA
Sbjct: 184 ---------GFTKFSRADYLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFLPQTA 220

[Close]

BLAST of Clc11G05960 vs. ExPASy TrEMBL
Match: A0A6J1FEG0 (60S ribosomal protein L10-like OS=Cucurbita moschata OX=3662 GN=LOC111444980 PE=3 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 5.4e-119
Identity = 213/238 (89.50%), Postives = 216/238 (90.76%), Query Frame = 0


Query: 54  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE 113
           RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE
Sbjct: 4   RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE 63

Query: 114 ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ 173
           ALEAARIACNKYM+KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ
Sbjct: 64  ALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ 123

Query: 174 GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLL 233
           GTCARVAIGQVLLSVRCKDSNSQH+QEALRRAKFKFPGRQKIIVSRKW            
Sbjct: 124 GTCARVAIGQVLLSVRCKDSNSQHSQEALRRAKFKFPGRQKIIVSRKW------------ 183

Query: 234 VQLKKCPSGGFTKFSRADYLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 292
                    GFTKFSRADYLAYKA+NKILPDGVNAKLLGCHGPLANRQPGRAFLP TA
Sbjct: 184 ---------GFTKFSRADYLAYKADNKILPDGVNAKLLGCHGPLANRQPGRAFLPDTA 220

[Close]

BLAST of Clc11G05960 vs. TAIR 10
Match: AT1G14320.1 (Ribosomal protein L16p/L10e family protein )

HSP 1 Score: 391.3 bits (1004), Expect = 6.6e-109
Identity = 188/235 (80.00%), Postives = 199/235 (84.68%), Query Frame = 0


Query: 54  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE 113
           RPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSE
Sbjct: 4   RPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSE 63

Query: 114 ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ 173
           ALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFGK  
Sbjct: 64  ALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKAL 123

Query: 174 GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLL 233
           GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKW            
Sbjct: 124 GTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKW------------ 183

Query: 234 VQLKKCPSGGFTKFSRADYLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLP 289
                    GFTKF+RAD+   + E +++PDGVNAK L CHGPLANRQPG AFLP
Sbjct: 184 ---------GFTKFNRADFTKLRQEKRVVPDGVNAKFLSCHGPLANRQPGSAFLP 217

[Close]

BLAST of Clc11G05960 vs. TAIR 10
Match: AT1G26910.1 (Ribosomal protein L16p/L10e family protein )

HSP 1 Score: 389.4 bits (999), Expect = 2.5e-108
Identity = 188/234 (80.34%), Postives = 198/234 (84.62%), Query Frame = 0


Query: 54  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE 113
           RPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENVSSE
Sbjct: 4   RPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENVSSE 63

Query: 114 ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ 173
           ALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFGK  
Sbjct: 64  ALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKAL 123

Query: 174 GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLL 233
           GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKW            
Sbjct: 124 GTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKW------------ 183

Query: 234 VQLKKCPSGGFTKFSRADYLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFL 288
                    GFTKF+RADY   + E +I+PDGVNAK L CHGPLANRQPG AFL
Sbjct: 184 ---------GFTKFNRADYTKLRQEKRIVPDGVNAKFLSCHGPLANRQPGSAFL 216

[Close]

BLAST of Clc11G05960 vs. TAIR 10
Match: AT1G66580.1 (senescence associated gene 24 )

HSP 1 Score: 383.6 bits (984), Expect = 1.4e-106
Identity = 187/238 (78.57%), Postives = 199/238 (83.61%), Query Frame = 0


Query: 54  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE 113
           RPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSE
Sbjct: 4   RPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSE 63

Query: 114 ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ 173
           ALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFGK  
Sbjct: 64  ALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKAL 123

Query: 174 GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLL 233
           GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKW            
Sbjct: 124 GTCARVAIGQVLLSVRCKDNHGVHAQEALRRAKFKFPGRQKIIVSRKW------------ 183

Query: 234 VQLKKCPSGGFTKFSRADYLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA 292
                    GFTKF+RA+Y   +A  +I+PDGVNAK L  HGPLANRQPG AF+  T+
Sbjct: 184 ---------GFTKFNRAEYTKLRAMKRIVPDGVNAKFLSNHGPLANRQPGSAFISATS 220

[Close]

BLAST of Clc11G05960 vs. TAIR 10
Match: AT1G14320.2 (Ribosomal protein L16p/L10e family protein )

HSP 1 Score: 259.2 bits (661), Expect = 3.9e-69
Identity = 136/235 (57.87%), Postives = 146/235 (62.13%), Query Frame = 0


Query: 54  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSE 113
           RPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSE
Sbjct: 4   RPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSE 63

Query: 114 ALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQ 173
           ALEAARIACNKYM                                               
Sbjct: 64  ALEAARIACNKYM----------------------------------------------- 123

Query: 174 GTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLL 233
                     VLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKW            
Sbjct: 124 ----------VLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKW------------ 160

Query: 234 VQLKKCPSGGFTKFSRADYLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLP 289
                    GFTKF+RAD+   + E +++PDGVNAK L CHGPLANRQPG AFLP
Sbjct: 184 ---------GFTKFNRADFTKLRQEKRVVPDGVNAKFLSCHGPLANRQPGSAFLP 160

The following BLAST results are available for this feature:

BLAST of Clc11G05960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459481.1	2.7e-120	91.18	PREDICTED: 60S ribosomal protein L10-like [Cucumis melo]	[more]
XP_038891235.1	1.0e-119	90.76	60S ribosomal protein L10-like [Benincasa hispida]	[more]
XP_022142890.1	1.3e-119	90.76	60S ribosomal protein L10-like [Momordica charantia] >XP_022142891.1 60S ribosom...	[more]
XP_022148973.1	2.3e-119	89.92	60S ribosomal protein L10-like [Momordica charantia]	[more]
KAG6578494.1	2.9e-119	89.92	60S ribosomal protein L10, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Clc11G05960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SPB3	1.1e-113	83.76	60S ribosomal protein L10 OS=Vitis riparia OX=96939 GN=RPL10 PE=2 SV=1	[more]
P93847	5.6e-113	85.47	60S ribosomal protein L10 OS=Solanum melongena OX=4111 GN=RPL10 PE=2 SV=1	[more]
Q9M5M7	2.1e-112	83.61	60S ribosomal protein L10 OS=Euphorbia esula OX=3993 GN=RPL10 PE=2 SV=1	[more]
Q93VT9	9.2e-108	80.00	60S ribosomal protein L10-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10A PE=1 SV=1	[more]
Q08770	3.5e-107	80.34	60S ribosomal protein L10-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10B PE=2 SV=2	[more]

BLAST of Clc11G05960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CAD5	1.3e-120	91.18	60S ribosomal protein L10-like OS=Cucumis melo OX=3656 GN=LOC103498603 PE=3 SV=1	[more]
A0A6J1CM71	6.4e-120	90.76	60S ribosomal protein L10-like OS=Momordica charantia OX=3673 GN=LOC111012895 PE...	[more]
A0A6J1D5K0	1.1e-119	89.92	60S ribosomal protein L10-like OS=Momordica charantia OX=3673 GN=LOC111017508 PE...	[more]
A0A5A7TFE6	5.4e-119	89.50	60S ribosomal protein L10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1FEG0	5.4e-119	89.50	60S ribosomal protein L10-like OS=Cucurbita moschata OX=3662 GN=LOC111444980 PE=...	[more]

BLAST of Clc11G05960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14320.1	6.6e-109	80.00	Ribosomal protein L16p/L10e family protein	[more]
AT1G26910.1	2.5e-108	80.34	Ribosomal protein L16p/L10e family protein	[more]
AT1G66580.1	1.4e-106	78.57	senescence associated gene 24	[more]
AT1G14320.2	3.9e-69	57.87	Ribosomal protein L16p/L10e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036920	Ribosomal protein L10e/L16 superfamily	GENE3D	3.90.1170.10	Ribosomal protein L10e/L16	coord: 52..224 e-value: 2.6E-93 score: 312.7
IPR036920	Ribosomal protein L10e/L16 superfamily	SUPERFAMILY	54686	Ribosomal protein L16p/L10e	coord: 54..221
None	No IPR available	GENE3D	3.30.60.300		coord: 246..285 e-value: 1.3E-14 score: 55.4
None	No IPR available	PANTHER	PTHR11726:SF42	60S RIBOSOMAL PROTEIN L10-LIKE	coord: 242..288 coord: 54..224
IPR016180	Ribosomal protein L10e/L16	PFAM	PF00252	Ribosomal_L16	coord: 62..216 e-value: 2.3E-36 score: 124.7
IPR016180	Ribosomal protein L10e/L16	CDD	cd01433	Ribosomal_L16_L10e	coord: 91..216 e-value: 1.69949E-44 score: 144.942
IPR001197	Ribosomal protein L10e	TIGRFAM	TIGR00279	TIGR00279	coord: 54..221 e-value: 2.0E-75 score: 250.2
IPR001197	Ribosomal protein L10e	PANTHER	PTHR11726	60S RIBOSOMAL PROTEIN L10	coord: 242..288
IPR001197	Ribosomal protein L10e	PANTHER	PTHR11726	60S RIBOSOMAL PROTEIN L10	coord: 54..224
IPR018255	Ribosomal protein L10e, conserved site	PROSITE	PS01257	RIBOSOMAL_L10E	coord: 158..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc11G05960.2	Clc11G05960.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome